BLASTX nr result
ID: Rehmannia25_contig00005887
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rehmannia25_contig00005887 (388 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002279556.1| PREDICTED: psbP-like protein 2, chloroplasti... 66 4e-09 gb|EOY18302.1| PsbP-like protein 2 [Theobroma cacao] 65 1e-08 ref|XP_002315245.1| photosystem 2 reaction center PsbP family pr... 60 2e-07 >ref|XP_002279556.1| PREDICTED: psbP-like protein 2, chloroplastic [Vitis vinifera] gi|296086288|emb|CBI31729.3| unnamed protein product [Vitis vinifera] Length = 235 Score = 66.2 bits (160), Expect = 4e-09 Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 1/93 (1%) Frame = -1 Query: 277 MAISSLSLSFVSNPLTNMFGM-RSWTSPAETAAVSSNGITKCSRNTSYDEERNHCTVSGN 101 MA+SSLSL +VS ++N + S P A S N I+ CSR T++DEE + Sbjct: 1 MALSSLSLGWVSTTISNKLDLPHSIDVPRFAAFTSCNSISACSRETAFDEE-------SH 53 Query: 100 CKRRALIFGIGAMTVNSFPASPLLAEGKPKNYE 2 +RR+L+ G+G + N FPAS L AE P NY+ Sbjct: 54 LERRSLLLGVGLLAANLFPASSLHAEEIPANYK 86 >gb|EOY18302.1| PsbP-like protein 2 [Theobroma cacao] Length = 234 Score = 64.7 bits (156), Expect = 1e-08 Identities = 37/92 (40%), Positives = 53/92 (57%) Frame = -1 Query: 277 MAISSLSLSFVSNPLTNMFGMRSWTSPAETAAVSSNGITKCSRNTSYDEERNHCTVSGNC 98 MA+SS+SL++V LTN A A+S + C + T+ +EE N C Sbjct: 1 MAMSSVSLNWVPATLTNKSNAPHSNELARATALSLHNSVACPKETTSNEENN-------C 53 Query: 97 KRRALIFGIGAMTVNSFPASPLLAEGKPKNYE 2 KRR L+ G+GA+TV+ PA+ LLAE P+NY+ Sbjct: 54 KRRLLLLGVGAVTVSLLPATSLLAEEIPQNYQ 85 >ref|XP_002315245.1| photosystem 2 reaction center PsbP family protein [Populus trichocarpa] gi|222864285|gb|EEF01416.1| photosystem 2 reaction center PsbP family protein [Populus trichocarpa] Length = 235 Score = 60.5 bits (145), Expect = 2e-07 Identities = 37/92 (40%), Positives = 49/92 (53%), Gaps = 1/92 (1%) Frame = -1 Query: 277 MAISSLSLSFVSNPLTNMFGMRSWTSPA-ETAAVSSNGITKCSRNTSYDEERNHCTVSGN 101 MAISSLSLS+ S L+ + AA S N C+ +++EE N Sbjct: 1 MAISSLSLSWASTTLSQKLSVPGSNEILPRVAAFSGNNSVTCTAEATFNEE-------SN 53 Query: 100 CKRRALIFGIGAMTVNSFPASPLLAEGKPKNY 5 CKRR L+ G+GA+T + PA+ L AE PKNY Sbjct: 54 CKRRLLLLGVGALTTSLVPANFLFAEEIPKNY 85