BLASTX nr result

ID: Rehmannia25_contig00005887 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00005887
         (388 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279556.1| PREDICTED: psbP-like protein 2, chloroplasti...    66   4e-09
gb|EOY18302.1| PsbP-like protein 2 [Theobroma cacao]                   65   1e-08
ref|XP_002315245.1| photosystem 2 reaction center PsbP family pr...    60   2e-07

>ref|XP_002279556.1| PREDICTED: psbP-like protein 2, chloroplastic [Vitis vinifera]
           gi|296086288|emb|CBI31729.3| unnamed protein product
           [Vitis vinifera]
          Length = 235

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
 Frame = -1

Query: 277 MAISSLSLSFVSNPLTNMFGM-RSWTSPAETAAVSSNGITKCSRNTSYDEERNHCTVSGN 101
           MA+SSLSL +VS  ++N   +  S   P   A  S N I+ CSR T++DEE        +
Sbjct: 1   MALSSLSLGWVSTTISNKLDLPHSIDVPRFAAFTSCNSISACSRETAFDEE-------SH 53

Query: 100 CKRRALIFGIGAMTVNSFPASPLLAEGKPKNYE 2
            +RR+L+ G+G +  N FPAS L AE  P NY+
Sbjct: 54  LERRSLLLGVGLLAANLFPASSLHAEEIPANYK 86


>gb|EOY18302.1| PsbP-like protein 2 [Theobroma cacao]
          Length = 234

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 37/92 (40%), Positives = 53/92 (57%)
 Frame = -1

Query: 277 MAISSLSLSFVSNPLTNMFGMRSWTSPAETAAVSSNGITKCSRNTSYDEERNHCTVSGNC 98
           MA+SS+SL++V   LTN          A   A+S +    C + T+ +EE N       C
Sbjct: 1   MAMSSVSLNWVPATLTNKSNAPHSNELARATALSLHNSVACPKETTSNEENN-------C 53

Query: 97  KRRALIFGIGAMTVNSFPASPLLAEGKPKNYE 2
           KRR L+ G+GA+TV+  PA+ LLAE  P+NY+
Sbjct: 54  KRRLLLLGVGAVTVSLLPATSLLAEEIPQNYQ 85


>ref|XP_002315245.1| photosystem 2 reaction center PsbP family protein [Populus
           trichocarpa] gi|222864285|gb|EEF01416.1| photosystem 2
           reaction center PsbP family protein [Populus
           trichocarpa]
          Length = 235

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 37/92 (40%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
 Frame = -1

Query: 277 MAISSLSLSFVSNPLTNMFGMRSWTSPA-ETAAVSSNGITKCSRNTSYDEERNHCTVSGN 101
           MAISSLSLS+ S  L+    +          AA S N    C+   +++EE        N
Sbjct: 1   MAISSLSLSWASTTLSQKLSVPGSNEILPRVAAFSGNNSVTCTAEATFNEE-------SN 53

Query: 100 CKRRALIFGIGAMTVNSFPASPLLAEGKPKNY 5
           CKRR L+ G+GA+T +  PA+ L AE  PKNY
Sbjct: 54  CKRRLLLLGVGALTTSLVPANFLFAEEIPKNY 85


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