BLASTX nr result
ID: Rehmannia25_contig00005874
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rehmannia25_contig00005874 (1482 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein A... 247 1e-62 ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein A... 247 1e-62 ref|XP_006485451.1| PREDICTED: uncharacterized protein LOC102622... 246 1e-62 ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein A... 246 2e-62 ref|XP_006492749.1| PREDICTED: uncharacterized protein LOC102612... 241 4e-61 gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ... 235 3e-59 gb|EMJ08972.1| hypothetical protein PRUPE_ppa026368mg, partial [... 231 5e-58 ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621... 228 7e-57 ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein A... 223 2e-55 ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626... 219 2e-54 ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein A... 219 2e-54 ref|XP_006494016.1| PREDICTED: uncharacterized protein LOC102608... 218 5e-54 gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ... 216 3e-53 gb|AAP54617.2| retrotransposon protein, putative, unclassified [... 216 3e-53 ref|XP_006478726.1| PREDICTED: putative ribonuclease H protein A... 208 5e-51 ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib... 207 7e-51 emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 204 8e-50 ref|XP_006482369.1| PREDICTED: putative ribonuclease H protein A... 204 1e-49 ref|XP_004308707.1| PREDICTED: putative ribonuclease H protein A... 204 1e-49 gb|EEE52627.1| hypothetical protein OsJ_34967 [Oryza sativa Japo... 199 3e-48 >ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X2 [Citrus sinensis] Length = 765 Score = 247 bits (630), Expect = 1e-62 Identities = 149/486 (30%), Positives = 236/486 (48%), Gaps = 2/486 (0%) Frame = +1 Query: 1 LAKQIWRIIKNPGSLMAKILKFRYFKHCDIMSAPVGNNPSYIWRSLCWSRDILDRGLYWK 180 +AKQ WRII+ P SL+A+++K +YF+H M A +G+NPSYIWRS+ W R+++ +GL W+ Sbjct: 277 VAKQSWRIIQAPESLVARVMKEKYFRHSCFMEAQIGSNPSYIWRSILWGREVIRKGLRWR 336 Query: 181 VGDGRSISITQDKWIPSRTEPWKLISSRDQAKE-KVSDLI-KDGTWDVQLVATLFPNFMA 354 +GDG+ + + Q W+P R E +K IS + VS LI +D W ++ F A Sbjct: 337 IGDGKLVKVYQSGWLP-RPETFKPISPPSLPLDTTVSVLIDEDQCWRDDVIRQHFHQEDA 395 Query: 355 QEICEIPIPHPPVPDSRYWKFDAKGVYSVREGYKHAIGCFNTPDNQSYNEISKWWKRLWA 534 +I +IP+P PD W +D KG YSV+ GY+ A+ S E + W +W Sbjct: 396 AQILKIPLPRQLSPDQVLWHYDKKGNYSVKSGYQLALQMKFPNRPSSSKEDNNSWNSIWY 455 Query: 535 MNVPPKIKIFWWRLANDFIHSGANLKAHHIPNTGTCRLCNFHLDSTIHSLFLCPDIKRTW 714 + +P K+KIF WR ND + + NL I T C+ C H ++ HSLF C ++ W Sbjct: 456 LQIPEKVKIFMWRATNDLLPTSENLWKRRILQTPWCQRCRSHRETIFHSLFDCKASRKIW 515 Query: 715 KMTPYANLIKRAKNGTTLDLCCWMIKNLANGEFDLFATCTWLIWKERQSTIHNGQHFKQV 894 K+T + +K K L L + + E +L W IW R I + Sbjct: 516 KLTTFEEEVKALKCKDVLSLLLALADRRSKTEMELIVAVCWSIWHSRNLFIFQNKKEDFQ 575 Query: 895 DILEKAEGLLLNFQKLNKKMCGDREDPSHSPATKWSLPPAGKLRLDVDACVNEHKHSFGI 1074 + AE ++ +++++ D W PPAG +++VDA + G+ Sbjct: 576 LSVAGAEAIVQSYKRIQMPQLQAFSDQDLVSHKHWKCPPAGWFKVNVDAAIKLENQRVGL 635 Query: 1075 GGVVRDDSNNLVLAFGRNICYQGSVLESELLALKEGLEMCVSAGIRPNIIASDSLLAVQA 1254 G V+R+ + A + + V +E A + GLE+ SAG P I+ +DS Sbjct: 636 GIVIRNSEGKFITAAIKPSKWIDRVDYAEAEATRFGLEVAESAGCLPLIVETDSKEVTDL 695 Query: 1255 VTEGGEADNYCNEKVQKIRFLLNSAQDAVVIHVRRSANSVADSLAKFVALSRTPFVWGKE 1434 V+ V +++ + + + H R+ N A +LAK +AL T V ++ Sbjct: 696 VSARKSTKAEIFWIVSEVQDTMKRLKHVKLQHSPRACNGFAHTLAK-LALDYTDCVIWED 754 Query: 1435 MFPLWL 1452 P L Sbjct: 755 NLPTHL 760 >ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X1 [Citrus sinensis] Length = 968 Score = 247 bits (630), Expect = 1e-62 Identities = 149/486 (30%), Positives = 236/486 (48%), Gaps = 2/486 (0%) Frame = +1 Query: 1 LAKQIWRIIKNPGSLMAKILKFRYFKHCDIMSAPVGNNPSYIWRSLCWSRDILDRGLYWK 180 +AKQ WRII+ P SL+A+++K +YF+H M A +G+NPSYIWRS+ W R+++ +GL W+ Sbjct: 480 VAKQSWRIIQAPESLVARVMKEKYFRHSCFMEAQIGSNPSYIWRSILWGREVIRKGLRWR 539 Query: 181 VGDGRSISITQDKWIPSRTEPWKLISSRDQAKE-KVSDLI-KDGTWDVQLVATLFPNFMA 354 +GDG+ + + Q W+P R E +K IS + VS LI +D W ++ F A Sbjct: 540 IGDGKLVKVYQSGWLP-RPETFKPISPPSLPLDTTVSVLIDEDQCWRDDVIRQHFHQEDA 598 Query: 355 QEICEIPIPHPPVPDSRYWKFDAKGVYSVREGYKHAIGCFNTPDNQSYNEISKWWKRLWA 534 +I +IP+P PD W +D KG YSV+ GY+ A+ S E + W +W Sbjct: 599 AQILKIPLPRQLSPDQVLWHYDKKGNYSVKSGYQLALQMKFPNRPSSSKEDNNSWNSIWY 658 Query: 535 MNVPPKIKIFWWRLANDFIHSGANLKAHHIPNTGTCRLCNFHLDSTIHSLFLCPDIKRTW 714 + +P K+KIF WR ND + + NL I T C+ C H ++ HSLF C ++ W Sbjct: 659 LQIPEKVKIFMWRATNDLLPTSENLWKRRILQTPWCQRCRSHRETIFHSLFDCKASRKIW 718 Query: 715 KMTPYANLIKRAKNGTTLDLCCWMIKNLANGEFDLFATCTWLIWKERQSTIHNGQHFKQV 894 K+T + +K K L L + + E +L W IW R I + Sbjct: 719 KLTTFEEEVKALKCKDVLSLLLALADRRSKTEMELIVAVCWSIWHSRNLFIFQNKKEDFQ 778 Query: 895 DILEKAEGLLLNFQKLNKKMCGDREDPSHSPATKWSLPPAGKLRLDVDACVNEHKHSFGI 1074 + AE ++ +++++ D W PPAG +++VDA + G+ Sbjct: 779 LSVAGAEAIVQSYKRIQMPQLQAFSDQDLVSHKHWKCPPAGWFKVNVDAAIKLENQRVGL 838 Query: 1075 GGVVRDDSNNLVLAFGRNICYQGSVLESELLALKEGLEMCVSAGIRPNIIASDSLLAVQA 1254 G V+R+ + A + + V +E A + GLE+ SAG P I+ +DS Sbjct: 839 GIVIRNSEGKFITAAIKPSKWIDRVDYAEAEATRFGLEVAESAGCLPLIVETDSKEVTDL 898 Query: 1255 VTEGGEADNYCNEKVQKIRFLLNSAQDAVVIHVRRSANSVADSLAKFVALSRTPFVWGKE 1434 V+ V +++ + + + H R+ N A +LAK +AL T V ++ Sbjct: 899 VSARKSTKAEIFWIVSEVQDTMKRLKHVKLQHSPRACNGFAHTLAK-LALDYTDCVIWED 957 Query: 1435 MFPLWL 1452 P L Sbjct: 958 NLPTHL 963 >ref|XP_006485451.1| PREDICTED: uncharacterized protein LOC102622884 [Citrus sinensis] Length = 1160 Score = 246 bits (629), Expect = 1e-62 Identities = 152/491 (30%), Positives = 249/491 (50%), Gaps = 9/491 (1%) Frame = +1 Query: 1 LAKQIWRIIKNPGSLMAKILKFRYFKHCDIMSAPVGNNPSYIWRSLCWSRDILDRGLYWK 180 LAKQ WRI + P SL+A++L+ RYF + ++A +G+NPSYIWRS+ W R I+ G W+ Sbjct: 636 LAKQGWRIQQCPDSLVARVLQARYFHSSNFLNAKIGSNPSYIWRSILWGRQIICGGSRWR 695 Query: 181 VGDGRSISITQDKWIPSRTEPWKLISSRDQAKEKVSDLIK-DGTWDVQLVATLFPNFMAQ 357 +G+G+ + I + WIP +I ++ VS+LI + WD +L+ F A Sbjct: 696 IGNGQDVHIHKANWIPKPFTFKPVIKPTMPSEALVSELINGENCWDEELIYKHFDKMDAD 755 Query: 358 EICEIPIPHPPVPDSRYWKFDAKGVYSVREGYKHAIGCFNTPDNQSYNEISK-WWKRLWA 534 I +IP+P D W F G Y+V+ GY+ A+ P S +E SK W +W+ Sbjct: 756 VITQIPLPRRLREDELIWHFGKSGQYTVKSGYQRALK-IRFPAMPSSSESSKNEWNIIWS 814 Query: 535 MNVPPKIKIFWWRLANDFIHSGANLKAHHIPNTGTCRLCNFHLDSTIHSLFLCPDIKRTW 714 + +P KI+IF WR A + + S NL I TC+LC +++ H+L C K+ W Sbjct: 815 LALPKKIRIFVWRAAKNLLPSAENLWKRKIVQEPTCQLCKMGIENVFHALVDCKAAKKVW 874 Query: 715 KMTPYANLIKRAKNGTTLDLCCWMIKNLANGEFDLFATCTWLIWKERQSTIHNGQHFKQV 894 +++ + I+ A L L + + +N + DLFA W W R + G+ Sbjct: 875 RLSLFYIDIQAAPGQDILSLLHGVKRMRSNADVDLFAVMLWAKWNARNQWLFKGKRENPQ 934 Query: 895 DILEKAEGLLLNFQKLNKKMCGDREDPSHSPATK-----WSLPPAGKLRLDVDACVNEHK 1059 ++ KAE ++ ++++ D SH K W+ P G ++++ DA N K Sbjct: 935 SVVAKAEAVMEAYKRVQPS-----ADVSHGKQQKVAQLGWNPPQEGFVKINTDAATNSEK 989 Query: 1060 HSFGIGGVVRDDSNNLVLAFGRNICYQGSVLESELLALKEGLEMCVSAGIRPNIIASDSL 1239 + G+G V+RD++ + + + GSV +E A++ GL++ A ++ I+ SDS Sbjct: 990 NLAGLGAVIRDENGQVTATAIKVSKFHGSVAYAEAEAMEWGLQVAKDAHVKDVIMESDSQ 1049 Query: 1240 LAVQAVT--EGGEADNYCNEKVQKIRFLLNSAQDAVVIHVRRSANSVADSLAKFVALSRT 1413 V V +G ++ Y V +I+ L S ++ RS N++A SL K +AL + Sbjct: 1050 EVVSLVNNRQGSRSEIYW--VVLEIQKLKESFDHVSCVYTHRSCNAIAHSLVK-IALEKC 1106 Query: 1414 PFVWGKEMFPL 1446 V K +PL Sbjct: 1107 ETVVWKGSYPL 1117 >ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus sinensis] Length = 769 Score = 246 bits (628), Expect = 2e-62 Identities = 144/477 (30%), Positives = 230/477 (48%), Gaps = 2/477 (0%) Frame = +1 Query: 1 LAKQIWRIIKNPGSLMAKILKFRYFKHCDIMSAPVGNNPSYIWRSLCWSRDILDRGLYWK 180 +AKQ WRII+ P SL+A+++K +YF+H M A +G+NPSYIWRS+ W R+++ +GL W+ Sbjct: 277 VAKQSWRIIQAPESLVARVMKEKYFRHSCFMEAQIGSNPSYIWRSILWGREVIRKGLRWR 336 Query: 181 VGDGRSISITQDKWIPSRTEPWKLISSRDQAKE-KVSDLI-KDGTWDVQLVATLFPNFMA 354 +GDG+ + + Q W+P R E +K IS + VS LI +D W ++ F A Sbjct: 337 IGDGKLVKVYQSGWLP-RPETFKPISPPSLPLDTTVSVLIDEDQCWRDDVIRQHFHQEDA 395 Query: 355 QEICEIPIPHPPVPDSRYWKFDAKGVYSVREGYKHAIGCFNTPDNQSYNEISKWWKRLWA 534 +I +IP+P PD W +D KG YSV+ GY+ A+ S E + W +W Sbjct: 396 AQILKIPLPRQLSPDQVLWHYDKKGNYSVKSGYQLALQMKFPNRPSSSKEDNNSWNSIWY 455 Query: 535 MNVPPKIKIFWWRLANDFIHSGANLKAHHIPNTGTCRLCNFHLDSTIHSLFLCPDIKRTW 714 + +P K+KIF WR ND + + NL I T C+ C H ++ HSLF C ++ W Sbjct: 456 LQIPEKVKIFMWRATNDLLPTSENLWKRRILQTPWCQRCRSHRETIFHSLFDCKASRKIW 515 Query: 715 KMTPYANLIKRAKNGTTLDLCCWMIKNLANGEFDLFATCTWLIWKERQSTIHNGQHFKQV 894 K+T + +K K L L + + E +L W IW R I + Sbjct: 516 KLTTFEEEVKALKCKDVLSLLLALADRRSKTEMELIVAVCWSIWHSRNLFIFQNKKEDFQ 575 Query: 895 DILEKAEGLLLNFQKLNKKMCGDREDPSHSPATKWSLPPAGKLRLDVDACVNEHKHSFGI 1074 + AE ++ +++++ + W PPAG +++VDA + G+ Sbjct: 576 LSVAGAEAIVQSYKRIQMPQLQAFSNQDLVSHKHWKCPPAGWFKVNVDAAIKLENQRVGL 635 Query: 1075 GGVVRDDSNNLVLAFGRNICYQGSVLESELLALKEGLEMCVSAGIRPNIIASDSLLAVQA 1254 G V+R+ + A + + V +E A + GLE+ SAG P I+ +DS Sbjct: 636 GIVIRNSEGKFITAAIKPSKWLDRVDYAEAEATRFGLEVAESAGCLPLIVETDSKEVTDL 695 Query: 1255 VTEGGEADNYCNEKVQKIRFLLNSAQDAVVIHVRRSANSVADSLAKFVALSRTPFVW 1425 V+ V +++ + + + H R+ N A +LAK V +W Sbjct: 696 VSARKSTKAEIFWIVSEVQDTMKRLKHVKIQHSPRTCNGFAHTLAKLVLDYTDCVIW 752 >ref|XP_006492749.1| PREDICTED: uncharacterized protein LOC102612946 [Citrus sinensis] Length = 589 Score = 241 bits (616), Expect = 4e-61 Identities = 143/488 (29%), Positives = 232/488 (47%), Gaps = 12/488 (2%) Frame = +1 Query: 16 WRIIKNPGSLMAKILKFRYFKHCDIMSAPVGNNPSYIWRSLCWSRDILDRGLYWKVGDGR 195 WR+I+NP SL+AK+LK +Y+K D + A +G+NPSYIWRS+ W R +L + + W++G+G Sbjct: 103 WRLIQNPDSLVAKVLKAKYYKQTDFLKAKIGSNPSYIWRSIVWGRHVLQKWIRWRIGNGE 162 Query: 196 SISITQDKWIPSRTEPWKLISSRDQAKEKVSDLIKDG-TWDVQLVATLFPNFMAQEICEI 372 I I WIP + ++ + KVS+L+ W+ ++ F A+ I I Sbjct: 163 KIQIHSSNWIPKPSTFKPILVQSLPTESKVSELLDQNLQWNEIMINQNFAKEDAEIIRNI 222 Query: 373 PIPHPPVPDSRYWKFDAKGVYSVREGYKHAIGCFNTPDNQSYNEISKWWKRLWAMNVPPK 552 P+P P D W ++ KG+YSV+ GY+ A+ + + W+ +W +N+P K Sbjct: 223 PLPRTPQEDMVIWHYNKKGIYSVKSGYQLALKIKFSESPAGSTGAPQGWQHIWRLNLPEK 282 Query: 553 IKIFWWRLANDFIHSGANLKAHHIPNTGTCRLCNFHLDSTIHSLFLCPDIKRTWKMTPYA 732 IKIF W+ + + NL + TC LC + H+L C ++ WK T Sbjct: 283 IKIFVWKATKNLLPMAENLWRRKVLKEPTCHLCKAGCEDVFHALMECRVARKIWKCTHLE 342 Query: 733 NLIKRAKNGTTLDLCCWMIKNLANGEFDLFATCTWLIWKERQSTIHNGQHFKQVDILEKA 912 N +K L + + N A E D AT W+ W R + G+ + + K Sbjct: 343 NEVKSVIREDMLSVMIGAMNNWAKSEVDYVATIWWVAWHARNKLLFQGKKLDPIGSVAKG 402 Query: 913 EGLLLNFQKLNKKMCGDREDPSHSPATKWSLPPAGKLRLDVDACVNEHKHSFGIGGVVRD 1092 + ++ +Q K + W+ PP K++++VDA V E + S G+G V+R+ Sbjct: 403 KTVMEVYQAQQVKERESHRNTVKGKMQIWTPPPNNKVKVNVDAAVKEDRKSAGLGVVIRN 462 Query: 1093 DSNNLVLAFGRNICYQGSVLESELLALKEGLEMCVSAGIRPNIIASD-SLLAVQAVTEGG 1269 ++ A +++ +QG++ +E A+K G+E +A D SL +V T+ Sbjct: 463 HRGQVLAAAVKSMNFQGNIAIAEAHAVKWGME-----------VAKDLSLSSVIIETDCK 511 Query: 1270 EADNYCNEKVQKIRFLL-------NSAQDAVVI---HVRRSANSVADSLAKFVALSRTPF 1419 + N+KV +L S QD +I HV R N A LAK S Sbjct: 512 NVADLANKKVSNRTEILWTMSDIHKSTQDFQLISFQHVPRKCNDFAHFLAKRALCSSESV 571 Query: 1420 VWGKEMFP 1443 +W + FP Sbjct: 572 IW-RNNFP 578 >gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa] Length = 1747 Score = 235 bits (600), Expect = 3e-59 Identities = 153/516 (29%), Positives = 245/516 (47%), Gaps = 25/516 (4%) Frame = +1 Query: 1 LAKQIWRIIKNPGSLMAKILKFRYFKHCDIMSAPVGNNPSYIWRSLCWSRDILDRGLYWK 180 L KQ WR++ P SL+A++LK +YF D M A +G++PSY+WRS W R++L +G+ W+ Sbjct: 1153 LGKQGWRLMMYPDSLVARMLKAKYFPWDDFMEAELGSSPSYLWRSFLWGRELLRKGVRWR 1212 Query: 181 VGDGRSISITQDKWIPSRTEPWKLISSRDQAKEKVSDLI-KDGTWDVQLVATLFPNFMAQ 357 +GDG+ + + D W+P ++ +VSDL+ +G W+++ + F + + Sbjct: 1213 IGDGKEVRVFIDPWVPGLPSFRPILRQGAPLFLRVSDLLHNNGGWNMEALNYWFTDDECE 1272 Query: 358 EICEIPIPHPPVPDSRYWKFDAKGVYSVREGY--------KHAIGCFNTPDNQSYNEISK 513 I I + PD W + G Y+V+ GY + AI P N Sbjct: 1273 AISSITVGATRRPDVYMWNYCKNGRYTVKSGYWLACEENREEAINIVLAPRN-------- 1324 Query: 514 WWKRLWAMNVPPKIKIFWWRLANDFIHSGANLKAHHIPNTGTCRLCNFHLDSTIHSLFLC 693 +WK LW + +PPKI F WR + FI L HI ++ +C C +S +H+ + C Sbjct: 1325 FWKHLWKLKLPPKINHFLWRCSMGFIPCMEVLLWKHIAHSASCFRCQQGRESPVHATWGC 1384 Query: 694 PDIKRTWKMTPYANLIKRAKNGTTLDLCCWMIKNLANGEFDLFATCTWLIWKERQSTIHN 873 ++ + + + + + + L L E LFA WL W ER + H Sbjct: 1385 SCCVAVFERAGFYSKLSSGQFPSFIHLLHHAFSTLDKEELQLFAVLLWLNWHERNNCYHK 1444 Query: 874 GQHFKQVDILEKAEGLLLNFQKLNKKMCGDR--------EDPSHSPATKWSLPPAGKLRL 1029 G I E + F K K+ G R E+ +W P +G+L++ Sbjct: 1445 GAVVPSDIIYENG----VKFLKCFKEALGCRAGVEVKAVEEVVPGSLRRWQAPSSGQLKV 1500 Query: 1030 DVDACVNEHKHSFGIGGVVRDDSNNLVLAFGRNICYQGSVLESELLALKEGLEMCVSAGI 1209 + D N FG G ++RD+ +L++A G+N + S L +ELLA+K GL++ V + Sbjct: 1501 NCDGAANFKDRCFGGGTIIRDEFGSLIVAGGKNFQHPVSSLVAELLAIKVGLDLVVERRL 1560 Query: 1210 RPNIIASDSLLAVQAVT--------EGGEADNYCNEKVQKIRFLLNSAQDAVVIHVRRSA 1365 R ++ SD L A+ + EGG E +Q L+N + + HVRR Sbjct: 1561 RNIMVESDCLEAIHLLNSKERCLAPEGGLV-----EDIQNTMALVNISS---IYHVRREG 1612 Query: 1366 NSVADSLAKFVALSRTPFVWGKEMFPLWLKELVLLD 1473 N+ A ++AKFVA + +VW E P WL L+ D Sbjct: 1613 NTAAHAIAKFVARNNGRYVW-LEDGPDWLMSLICHD 1647 >gb|EMJ08972.1| hypothetical protein PRUPE_ppa026368mg, partial [Prunus persica] Length = 1060 Score = 231 bits (590), Expect = 5e-58 Identities = 152/501 (30%), Positives = 242/501 (48%), Gaps = 7/501 (1%) Frame = +1 Query: 1 LAKQIWRIIKNPGSLMAKILKFRYFKHCDIMSAPVGNNPSYIWRSLCWSRDILDRGLYWK 180 LAKQ WRI++ P SL+A+I + RY + A VG NPS+IWRSL W +++L++GL W+ Sbjct: 569 LAKQCWRILRTPESLVARIFRARYHPSVPFLEAEVGTNPSFIWRSLQWGKELLNKGLRWR 628 Query: 181 VGDGRSISITQDKWIPSRTEPWKLISSRD-QAKEKVSDLI-KDGTWDVQLVATLFPNFMA 354 VG G SI + DKW+P+ +K++S +V DL G W+V L+ +F + Sbjct: 629 VGSGVSIQVYTDKWLPA-PSCFKIMSPPQLPLSTRVCDLFTSSGQWNVPLLKDIFWDQEV 687 Query: 355 QEICEIPIPHPPVPDSRYWKFDAKGVYSVREGYKHA---IGCFNTPDNQSYNEISKWWKR 525 I +IP+ D W ++ G+YSV+ GY+ A + + + SK+WK+ Sbjct: 688 DAILQIPLASLAGHDCLIWHYERNGMYSVKSGYRLAGLEKDKMSGEPSARVDLNSKFWKK 747 Query: 526 LWAMNVPPKIKIFWWRLANDFIHSGANLKAHHIPNTGTCRLCNFHLDSTIHSLFLCPDIK 705 +WA+ +P KIK F WR A DF+ G L I T C C+ +S +H+++LC K Sbjct: 748 IWALKIPNKIKFFLWRCAWDFLPCGQILFNRKIAPTPICPKCHRKAESVLHAVWLCEAAK 807 Query: 706 RTWKMTPYANLIKRAKNGTTLDLCCWMIKNLANGEFDLFATCTWLIWKERQSTIHNGQHF 885 W+ + + N+ + + + +L + + + E LFA W +W R S I G+ Sbjct: 808 EVWRNSAWGNVCEVWRVNSFRELWHALQLSSSGEEQGLFAYLCWGLWNRRNSFIFEGKSE 867 Query: 886 KQVDILEKAEGLLLNFQKLNKKM--CGDREDPSHSPATKWSLPPAGKLRLDVDACVNEHK 1059 + +L + L F N + R+ +P W PPA K V Sbjct: 868 TAIQLLSRMTKLAQEFSDANNILHTIHGRQSSPQAPLQGWRPPPAVKSGDSVR------- 920 Query: 1060 HSFGIGGVVRDDSNNLVLAFGRNICYQGSVLESELLALKEGLEMCVSAGIRPNIIASDSL 1239 G+G VVR+ + + A R I ++EL+A EGL + G I+ D+ Sbjct: 921 ---GVGVVVRNANGEFMAACVRRIHASYGARQTELMATIEGLRFAIDMGFTDAILEMDAQ 977 Query: 1240 LAVQAVTEGGEADNYCNEKVQKIRFLLNSAQDAVVIHVRRSANSVADSLAKFVALSRTPF 1419 + ++ E + ++++ +LLN+ + V R N VA +LA+F A F Sbjct: 978 DCLNSIFSTEEYNGIDGPLLEEVNYLLNNFRAVVCHWTPRCGNKVAHTLAQF-AFHCNEF 1036 Query: 1420 VWGKEMFPLWLKELVLLDVNS 1482 V E P WL ++ DV S Sbjct: 1037 VTWIEEAPSWLLPVLEADVLS 1057 >ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis] Length = 2303 Score = 228 bits (580), Expect = 7e-57 Identities = 135/477 (28%), Positives = 224/477 (46%), Gaps = 2/477 (0%) Frame = +1 Query: 1 LAKQIWRIIKNPGSLMAKILKFRYFKHCDIMSAPVGNNPSYIWRSLCWSRDILDRGLYWK 180 +AKQ WR+I+ P SL++K+L+ RYFK C + A G+NPS+IWRS+ W R ++ +G W+ Sbjct: 843 VAKQGWRLIQFPNSLVSKVLRARYFKSCSFLDAKPGSNPSFIWRSILWGRQVIQKGARWR 902 Query: 181 VGDGRSISITQDKWIPSRTEPWKLISSRD-QAKEKVSDLIKD-GTWDVQLVATLFPNFMA 354 +G+G +I + +D WIP R + +K IS V +L+ D W+V + F Sbjct: 903 IGNGSNILVYKDNWIP-RPDTFKPISPPTLPIDTTVGELMDDENNWNVAKLNQHFMQEDT 961 Query: 355 QEICEIPIPHPPVPDSRYWKFDAKGVYSVREGYKHAIGCFNTPDNQSYNEISKWWKRLWA 534 + I +IP+P D W +D G YSV+ GY+ A+ + + SK WK +W+ Sbjct: 962 EAILKIPLPRSQKVDEMMWHYDKHGEYSVKSGYQIALKLKAPDEPSNSGSNSKRWKAVWS 1021 Query: 535 MNVPPKIKIFWWRLANDFIHSGANLKAHHIPNTGTCRLCNFHLDSTIHSLFLCPDIKRTW 714 M +P K+KIF WR A + + + NL C+ CN +++ H+L C ++ W Sbjct: 1022 MELPEKMKIFMWRAARNLLPTAENLWKRKCLKDPICQGCNREVETVRHALLDCKAARKIW 1081 Query: 715 KMTPYANLIKRAKNGTTLDLCCWMIKNLANGEFDLFATCTWLIWKERQSTIHNGQHFKQV 894 + I A+N L+ + + + W IW R I G+ Sbjct: 1082 YHATSSVQISNAQNQDILEFIYEVWSTWGKTKAEQTIAFCWAIWFARNKRIFEGKKSDPR 1141 Query: 895 DILEKAEGLLLNFQKLNKKMCGDREDPSHSPATKWSLPPAGKLRLDVDACVNEHKHSFGI 1074 KAE LL + + K + KW PP L+++VDA +N G+ Sbjct: 1142 ASAAKAESLLEAYHRARKPDASHIHNVKRIVQKKWEPPPGNFLKVNVDAAINNRDQVAGL 1201 Query: 1075 GGVVRDDSNNLVLAFGRNICYQGSVLESELLALKEGLEMCVSAGIRPNIIASDSLLAVQA 1254 G V++D S +V A + + + V +E A++ GL++ + I+ +D V Sbjct: 1202 GAVIKDPSGKIVAAGTKQVPLREGVSFAEAEAMEWGLQIARELSLSALIMETDCKEVVDL 1261 Query: 1255 VTEGGEADNYCNEKVQKIRFLLNSAQDAVVIHVRRSANSVADSLAKFVALSRTPFVW 1425 + + + + I+ ++ H+ R+ N+ A SLAK + T VW Sbjct: 1262 LNNTKGSRTGISWVISDIQEQRRDFKEVKFRHIPRTCNTCAHSLAKLAVGANTSAVW 1318 >ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria vesca subsp. vesca] Length = 1152 Score = 223 bits (567), Expect = 2e-55 Identities = 140/476 (29%), Positives = 247/476 (51%), Gaps = 11/476 (2%) Frame = +1 Query: 1 LAKQIWRIIKNPGSLMAKILKFRYFKHCDIMSAPVGNNPSYIWRSLCWSRDILDRGLYWK 180 LAKQ WR++ P SL+A++LK +YF ++ A VG SY WRSL +++L +GL ++ Sbjct: 624 LAKQGWRMLCRPQSLLAQVLKMKYFPTSSLIQAEVGKRISYSWRSLMRGKELLQQGLRFQ 683 Query: 181 VGDGRSISITQDKW--IPSRTEPWKLISSRDQAKEKVSDLIKDGT--WDVQLVATLFPNF 348 VG+G +I + D W +P +P+ L + +V +LI++GT W+ L+ LF Sbjct: 684 VGNGENIHLWDDPWLPLPYTFKPFSLPMHGSEGM-RVCELIEEGTGGWNEWLLEELFTPM 742 Query: 349 MAQEICEIPIPHPPVPDSRYWKFDAKGVYSVREGY--KHAIGCFNTPDNQSYNEI--SKW 516 ++ I +IP+ D W FD KG Y+V+ GY + N + S +++ S+ Sbjct: 743 ESEIILKIPLSLNGGEDRLVWHFDNKGCYNVKSGYFVGRLLDGLNRKASGSDSDVQWSRL 802 Query: 517 WKRLWAMNVPPKIKIFWWRLANDFIHSGANL--KAHHIPNTGTCRLCNFHLDSTIHSLFL 690 W +LW VPPK+++ WRL + S A L K +P+ C C+ +++ ++H Sbjct: 803 WCKLWRTQVPPKVRMHAWRLVKGTLPSRAALVKKQVQLPDV-NCVFCSTNVEDSLHLFKN 861 Query: 691 CPDIKRTWKMTPYANLIKRAKNGTTLDLCCW-MIKNLANGEFDLFATCTWLIWKERQSTI 867 C ++ W+ + R ++++ W M++ L+ + + F W+IW ER + + Sbjct: 862 CEALQPFWQQ-GMVQIHPRTHPSISVEVWFWDMVEMLSGEKLEGFLMALWVIWVERNNMV 920 Query: 868 HNGQHFKQVDILEKAEGLLLNFQKLNKKMCGDREDPSHSPATKWSLPPAGKLRLDVDACV 1047 GQ + ++++ + LLL ++ +++ G R+ +KW+ PP+G+LR+++D Sbjct: 921 WRGQFYNITNMMDWSSSLLLEYKHCHQRSVGTRK----KNKSKWTCPPSGRLRVNIDGSF 976 Query: 1048 NEHKHSFGIGGVVRDDSNNLVLAFGRNICYQGSVLESELLALKEGLEMCVSAGIRPNIIA 1227 + G+G V+RD V + R S + E+ AL+ GL +CV G R + Sbjct: 977 AHEEGRGGVGVVIRDHKGACVASLARPFPNAASAIHMEVEALRAGLLVCVQQGWRDVEVE 1036 Query: 1228 SDSLLAVQAVTEGGEADNYCNEKVQKIRFLLNSAQDAVVIHVRRSANSVADSLAKF 1395 SD + VQA+ GE + ++ + +++ + HV R ANSVA+ LA F Sbjct: 1037 SDCMNLVQAMQTDGEDFSMVGRIIEDCQRYVSAFNFFQLQHVCREANSVANRLAHF 1092 >ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626455 [Citrus sinensis] Length = 1452 Score = 219 bits (558), Expect = 2e-54 Identities = 136/484 (28%), Positives = 227/484 (46%), Gaps = 9/484 (1%) Frame = +1 Query: 1 LAKQIWRIIKNPGSLMAKILKFRYFKHCDIMSAPVGNNPSYIWRSLCWSRDILDRGLYWK 180 +AKQ WR+++ P SLMA+++K RY+K+ +A VG+NPS+IWRS+ W ++ +G+ W+ Sbjct: 960 VAKQGWRLVRYPNSLMARVMKARYYKNSTFWNAKVGSNPSFIWRSILWGSQVIKKGVRWR 1019 Query: 181 VGDGRSISITQDKWIPSRTEPWKLISSRDQAKEK-VSDLI-KDGTWDVQLVATLFPNFMA 354 +GDG+ + + +DKWIP R ++ IS + E V+DLI + W V + F Sbjct: 1020 IGDGKKVLVYKDKWIP-RPATFQPISPKTLPHETVVADLIDSENKWRVDRLEQHFMKEDI 1078 Query: 355 QEICEIPIPHPPVPDSRYWKFDAKGVYSVREGYKHAIGCFNTPDNQSYNEISKWWKRLWA 534 + I +I +P D W FD KG YSV+ GY+ A+ + +S N S+ WK W Sbjct: 1079 EAILKILLPSGKEEDEVLWHFDKKGEYSVKSGYQLALNQNFPNEPESSNSSSRLWKIPWM 1138 Query: 535 MNVPPKIKIFWWRLANDFIHSGANLKAHHIPNTGTCRLCNFHLDSTIHSLFLCPDIKRTW 714 +++P K+KIF WR + + + NL C+ C +++ H L C ++ W Sbjct: 1139 LDLPEKVKIFMWRALKNILPTAENLWKRRSLQEPICQRCKLQVETVSHVLIECKAARKIW 1198 Query: 715 KMTPYANLIKRAKNGTTLDLCCWMIKNLANGEFDLFATCTWLIWKERQSTIHNGQHFKQV 894 + P + N M + E +L W+IW R I G+ Sbjct: 1199 DLAPLIVQPSKDHNQDFFSAIQEMWSRSSTAEAELMIVYCWVIWSARNKFIFEGKKSDSR 1258 Query: 895 DILEKAEGLLLNFQKLNKKMCGDREDPSHSPATKWSLPPAGKLRLDVDACVNEHKHSFGI 1074 + KA+ +L +Q+++K KW P L+L+VDA V+ G+ Sbjct: 1259 FLAAKADSVLKAYQRVSKPGNVHGAKDRGIDQQKWKPPSQNVLKLNVDAAVSTKDQKVGL 1318 Query: 1075 GGVVRDDSNNLVLAFGRNICYQGSVLESELLALKEGLEMCVSAGIRPNIIASDSLLAVQA 1254 G +VRD ++ + ++ V +E A+ GL++ N I+S SL+ Sbjct: 1319 GAIVRDAEGKILAVGIKQAQFRERVSLAEAEAIHWGLQVA-------NQISSSSLIVESD 1371 Query: 1255 VTEGGEADNYCNEKVQKIRFLLNSA-------QDAVVIHVRRSANSVADSLAKFVALSRT 1413 E E N +I ++L+ + + R+ N+ A +LAKF + + Sbjct: 1372 CKEVVELLNNTKGSRTEIHWILSDVRRESKEFKQVQFSFIPRTCNTYAHALAKFALRNSS 1431 Query: 1414 PFVW 1425 VW Sbjct: 1432 TDVW 1435 >ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus sinensis] Length = 765 Score = 219 bits (558), Expect = 2e-54 Identities = 136/484 (28%), Positives = 227/484 (46%), Gaps = 9/484 (1%) Frame = +1 Query: 1 LAKQIWRIIKNPGSLMAKILKFRYFKHCDIMSAPVGNNPSYIWRSLCWSRDILDRGLYWK 180 +AKQ WR+++ P SLMA+++K RY+K+ +A VG+NPS+IWRS+ W ++ +G+ W+ Sbjct: 273 VAKQGWRLVRYPNSLMARVMKARYYKNSTFWNAKVGSNPSFIWRSILWGSQVIKKGVRWR 332 Query: 181 VGDGRSISITQDKWIPSRTEPWKLISSRDQAKEK-VSDLI-KDGTWDVQLVATLFPNFMA 354 +GDG+ + + +DKWIP R ++ IS + E V+DLI + W V + F Sbjct: 333 IGDGKKVLVYKDKWIP-RPATFQPISPKTLPHETVVADLIDSENKWRVDRLEQHFMKEDI 391 Query: 355 QEICEIPIPHPPVPDSRYWKFDAKGVYSVREGYKHAIGCFNTPDNQSYNEISKWWKRLWA 534 + I +I +P D W FD KG YSV+ GY+ A+ + +S N S+ WK W Sbjct: 392 EAILKILLPSGKEEDEVLWHFDKKGEYSVKSGYQLALNQNFPNEPESSNSSSRLWKIPWM 451 Query: 535 MNVPPKIKIFWWRLANDFIHSGANLKAHHIPNTGTCRLCNFHLDSTIHSLFLCPDIKRTW 714 +++P K+KIF WR + + + NL C+ C +++ H L C ++ W Sbjct: 452 LDLPEKVKIFMWRALKNILPTAENLWKRRSLQEPICQRCKLQVETVSHVLIECKAARKIW 511 Query: 715 KMTPYANLIKRAKNGTTLDLCCWMIKNLANGEFDLFATCTWLIWKERQSTIHNGQHFKQV 894 + P + N M + E +L W+IW R I G+ Sbjct: 512 DLAPLIVQPSKDHNQDFFSAIQEMWSRSSTAEAELMIVYCWVIWSARNKFIFEGKKSDSR 571 Query: 895 DILEKAEGLLLNFQKLNKKMCGDREDPSHSPATKWSLPPAGKLRLDVDACVNEHKHSFGI 1074 + KA+ +L +Q+++K KW P L+L+VDA V+ G+ Sbjct: 572 FLAAKADSVLKAYQRVSKPGNVHGAKDRGIDQQKWKPPSQNVLKLNVDAAVSTKXQKVGL 631 Query: 1075 GGVVRDDSNNLVLAFGRNICYQGSVLESELLALKEGLEMCVSAGIRPNIIASDSLLAVQA 1254 G +VRD ++ + ++ V +E A+ GL++ N I+S SL+ Sbjct: 632 GAIVRDAEGKILAVGIKQAQFRERVSLAEAEAIHWGLQVA-------NQISSSSLIVESD 684 Query: 1255 VTEGGEADNYCNEKVQKIRFLLNSA-------QDAVVIHVRRSANSVADSLAKFVALSRT 1413 E E N +I ++L+ + + R+ N+ A +LAKF + + Sbjct: 685 CKEVVELLNNTKGSRTEIHWILSDVRRESKDFKQVQFSFIPRTCNTYAHALAKFALRNSS 744 Query: 1414 PFVW 1425 VW Sbjct: 745 TDVW 748 >ref|XP_006494016.1| PREDICTED: uncharacterized protein LOC102608298 [Citrus sinensis] Length = 1570 Score = 218 bits (555), Expect = 5e-54 Identities = 126/438 (28%), Positives = 216/438 (49%), Gaps = 2/438 (0%) Frame = +1 Query: 67 RYFKHCDIMSAPVGNNPSYIWRSLCWSRDILDRGLYWKVGDGRSISITQDKWIPSRTEPW 246 RYF+H D M+A +G+NPS+IWRS+ W R ++ +G W++G+G+SI + ++ W+P R + Sbjct: 802 RYFQHKDFMNARLGSNPSFIWRSILWGRQVISKGSRWRIGNGQSIMLHKENWLP-RPLTF 860 Query: 247 KLISSRD-QAKEKVSDLI-KDGTWDVQLVATLFPNFMAQEICEIPIPHPPVPDSRYWKFD 420 K IS A V++LI ++ TW+ L+ F A+ I I +P P+ D W +D Sbjct: 861 KPISKPSLPADALVAELINEEHTWNEGLIHRHFAKIDAEAIVRILLPRRPMKDEVIWHYD 920 Query: 421 AKGVYSVREGYKHAIGCFNTPDNQSYNEISKWWKRLWAMNVPPKIKIFWWRLANDFIHSG 600 K YSV+ GY+ A+ S W +W + +P KI+IF WR A + + S Sbjct: 921 RKCQYSVKSGYQIALNLKFPAKPTSSATSENQWNAIWLLTLPEKIRIFAWRAAKNLLPSA 980 Query: 601 ANLKAHHIPNTGTCRLCNFHLDSTIHSLFLCPDIKRTWKMTPYANLIKRAKNGTTLDLCC 780 NL + C+ CN L++ H+L C +K+ WK+T + + +K + L L Sbjct: 981 ENLWKRKVIQEPLCQFCNKKLETIFHALVGCKVVKKIWKITRFEDDLKDSVEQDMLSLLI 1040 Query: 781 WMIKNLANGEFDLFATCTWLIWKERQSTIHNGQHFKQVDILEKAEGLLLNFQKLNKKMCG 960 + + + +L T W+IW + S I G + KAE +L F++ Sbjct: 1041 ELKLRRSKDDIELLVTILWMIWNAQNSWIFKGVKDSPHVTVSKAEAVLEAFRRTQLPAAT 1100 Query: 961 DREDPSHSPATKWSLPPAGKLRLDVDACVNEHKHSFGIGGVVRDDSNNLVLAFGRNICYQ 1140 + S S W P G +++VDA N K +G V+RD++ N++ A + + Sbjct: 1101 HIDIQSSSKLKAWKPPQRGHFKVNVDAATNSEKQIASLGAVIRDEAGNVIAAAVKVSKFY 1160 Query: 1141 GSVLESELLALKEGLEMCVSAGIRPNIIASDSLLAVQAVTEGGEADNYCNEKVQKIRFLL 1320 G V +E A++ GL + +A I+ SD+ V+ V + + +++ +L Sbjct: 1161 GDVFIAEAEAIEWGLRLAGNACTESLIVESDAQEVVKLVNNSQGCRSEIFWIISEVQRVL 1220 Query: 1321 NSAQDAVVIHVRRSANSV 1374 S V + RS++++ Sbjct: 1221 KSFSSVCVQYTHRSSSAI 1238 >gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa Japonica Group] Length = 1382 Score = 216 bits (549), Expect = 3e-53 Identities = 145/506 (28%), Positives = 235/506 (46%), Gaps = 14/506 (2%) Frame = +1 Query: 1 LAKQIWRIIKNPGSLMAKILKFRYFKHCDIMSAPVGNNPSYIWRSLCWSRDILDRGLYWK 180 L +Q WR++ +P SL +++LK RYF + A +PS+ WRSL + R++L +G+ W Sbjct: 881 LGRQCWRLLTDPDSLCSRVLKGRYFPNSSFWEAAQPKSPSFTWRSLLFGRELLAKGVRWG 940 Query: 181 VGDGRSISITQDKWIPSRTEPWKLISSRDQAKEKVSDLIKDGT--WDVQLVATLFPNFMA 354 VGDG++I I D WIP S VS L+ + WD L+ +LFP +A Sbjct: 941 VGDGKTIKIFSDNWIPGFRPQLVTTLSPFPTDATVSCLMNEDARCWDGDLIRSLFPVDIA 1000 Query: 355 QEICEIPIPHPPVPDSRYWKFDAKGVYSVREGYKHAIGCFNTPDNQSYN--------EIS 510 +EI +IPI D W D G+YSVR Y A D + E Sbjct: 1001 KEILQIPISRHGDADFASWPHDKLGLYSVRSAYNLARSEAFFADQSNSGRGMASRLLESQ 1060 Query: 511 KWWKRLWAMNVPPKIKIFWWRLANDFIHSGANLKAHHIPNTGTCRLCNFHLDSTIHSLFL 690 K WK LW +N P K+KI WR A++ + +G L+ HIP+T C CN D T+ +FL Sbjct: 1061 KDWKGLWKINAPGKMKITLWRAAHECLATGFQLRRRHIPSTDGCVFCN--RDDTVEHVFL 1118 Query: 691 -CPDIKRTWKMTPYANLIKRAKNGTTLDLCCWMIKNLANGEF---DLFATCTWLIWKERQ 858 CP + W+ +K +NG + + W+ L G L A W IW+ R Sbjct: 1119 FCPFAAQIWEEIKGKCAVKLGRNGFS-TMRQWIFDFLKRGSSHANTLLAVTFWHIWEARN 1177 Query: 859 STIHNGQHFKQVDILEKAEGLLLNFQKLNKKMCGDREDPSHSPATKWSLPPAGKLRLDVD 1038 +T +N ++ K + K N K + + +W PPA ++ D Sbjct: 1178 NTKNNNGTVHPQRVVIKILSYVDMILKHNTKTVDGQRGGNTQAIPRWQPPPASVWMINSD 1237 Query: 1039 ACVNEHKHSFGIGGVVRDDSNNLVLAFGRNICYQGSVLESELLALKEGLEMCVSAGIRPN 1218 A + + G+G ++RD++ ++A I +E LA++ L + G+ Sbjct: 1238 AAIFSSSRTMGVGALIRDNTGKCLVACSEMISDVVLPELAEALAIRRALGLAKEEGLEHI 1297 Query: 1219 IIASDSLLAVQAVTEGGEADNYCNEKVQKIRFLLNSAQDAVVIHVRRSANSVADSLAKFV 1398 ++ASD L ++ + G + ++ I+ L ++ +HV R +N A SLA+ Sbjct: 1298 VMASDCLTVIRRIQTSGRDRSGVGCVIEDIKKLASTFVLCSFMHVNRLSNLAAHSLARNA 1357 Query: 1399 ALSRTPFVWGKEMFPLWLKELVLLDV 1476 LS + + P ++++++ DV Sbjct: 1358 ELSTCTVY--RSVIPDYIRDILCDDV 1381 >gb|AAP54617.2| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] gi|125575397|gb|EAZ16681.1| hypothetical protein OsJ_32156 [Oryza sativa Japonica Group] Length = 1339 Score = 216 bits (549), Expect = 3e-53 Identities = 145/506 (28%), Positives = 235/506 (46%), Gaps = 14/506 (2%) Frame = +1 Query: 1 LAKQIWRIIKNPGSLMAKILKFRYFKHCDIMSAPVGNNPSYIWRSLCWSRDILDRGLYWK 180 L +Q WR++ +P SL +++LK RYF + A +PS+ WRSL + R++L +G+ W Sbjct: 838 LGRQCWRLLTDPDSLCSRVLKGRYFPNSSFWEAAQPKSPSFTWRSLLFGRELLAKGVRWG 897 Query: 181 VGDGRSISITQDKWIPSRTEPWKLISSRDQAKEKVSDLIKDGT--WDVQLVATLFPNFMA 354 VGDG++I I D WIP S VS L+ + WD L+ +LFP +A Sbjct: 898 VGDGKTIKIFSDNWIPGFRPQLVTTLSPFPTDATVSCLMNEDARCWDGDLIRSLFPVDIA 957 Query: 355 QEICEIPIPHPPVPDSRYWKFDAKGVYSVREGYKHAIGCFNTPDNQSYN--------EIS 510 +EI +IPI D W D G+YSVR Y A D + E Sbjct: 958 KEILQIPISRHGDADFASWPHDKLGLYSVRSAYNLARSEAFFADQSNSGRGMASRLLESQ 1017 Query: 511 KWWKRLWAMNVPPKIKIFWWRLANDFIHSGANLKAHHIPNTGTCRLCNFHLDSTIHSLFL 690 K WK LW +N P K+KI WR A++ + +G L+ HIP+T C CN D T+ +FL Sbjct: 1018 KDWKGLWKINAPGKMKITLWRAAHECLATGFQLRRRHIPSTDGCVFCN--RDDTVEHVFL 1075 Query: 691 -CPDIKRTWKMTPYANLIKRAKNGTTLDLCCWMIKNLANGEF---DLFATCTWLIWKERQ 858 CP + W+ +K +NG + + W+ L G L A W IW+ R Sbjct: 1076 FCPFAAQIWEEIKGKCAVKLGRNGFS-TMRQWIFDFLKRGSSHANTLLAVTFWHIWEARN 1134 Query: 859 STIHNGQHFKQVDILEKAEGLLLNFQKLNKKMCGDREDPSHSPATKWSLPPAGKLRLDVD 1038 +T +N ++ K + K N K + + +W PPA ++ D Sbjct: 1135 NTKNNNGTVHPQRVVIKILSYVDMILKHNTKTVDGQRGGNTQAIPRWQPPPASVWMINSD 1194 Query: 1039 ACVNEHKHSFGIGGVVRDDSNNLVLAFGRNICYQGSVLESELLALKEGLEMCVSAGIRPN 1218 A + + G+G ++RD++ ++A I +E LA++ L + G+ Sbjct: 1195 AAIFSSSRTMGVGALIRDNTGKCLVACSEMISDVVLPELAEALAIRRALGLAKEEGLEHI 1254 Query: 1219 IIASDSLLAVQAVTEGGEADNYCNEKVQKIRFLLNSAQDAVVIHVRRSANSVADSLAKFV 1398 ++ASD L ++ + G + ++ I+ L ++ +HV R +N A SLA+ Sbjct: 1255 VMASDCLTVIRRIQTSGRDRSGVGCVIEDIKKLASTFVLCSFMHVNRLSNLAAHSLARNA 1314 Query: 1399 ALSRTPFVWGKEMFPLWLKELVLLDV 1476 LS + + P ++++++ DV Sbjct: 1315 ELSTCTVY--RSVIPDYIRDILCDDV 1338 >ref|XP_006478726.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus sinensis] Length = 473 Score = 208 bits (529), Expect = 5e-51 Identities = 130/477 (27%), Positives = 213/477 (44%), Gaps = 2/477 (0%) Frame = +1 Query: 1 LAKQIWRIIKNPGSLMAKILKFRYFKHCDIMSAPVGNNPSYIWRSLCWSRDILDRGLYWK 180 LAKQ WR++ NP SLMAKILK +YF H M A +G+ PS++WRS+ W R++L GL W+ Sbjct: 23 LAKQGWRLLHNPDSLMAKILKAKYFSHSGFMEAKLGSKPSFVWRSIIWGRELLQEGLRWR 82 Query: 181 VGDGRSISITQDKWIPSRTEPWKLISSRDQAKEKVSDLIKD-GTWDVQLVATLFPNFMAQ 357 +G G IS W+ + + S V+DLI D W +A L+P +++ Sbjct: 83 IGQGTKISACSKIWLRNVGSCTSIPPSNSLKDVVVADLINDINQWKEDKIAQLYPKEISE 142 Query: 358 EICEIPIPHPPVPDSRYWKFDAKGVYSVREGYKHAIGCFNTPDNQSYNEISK-WWKRLWA 534 I ++P+P P D W+FD G Y+V+ GY+ A+ P+N ++ SK WK +W+ Sbjct: 143 RIVKLPLPKTPQEDILIWRFDKHGTYTVKSGYQLAVQ-LKFPENPGCSDASKSQWKVIWS 201 Query: 535 MNVPPKIKIFWWRLANDFIHSGANLKAHHIPNTGTCRLCNFHLDSTIHSLFLCPDIKRTW 714 +P K+KIF WR A + + + NL + + C+ C + H+L C ++TW Sbjct: 202 TEIPEKVKIFMWRAAKNLLPTANNLWKKKVVPSPICQRCFCKSEDPCHALLDCKAARKTW 261 Query: 715 KMTPYANLIKRAKNGTTLDLCCWMIKNLANGEFDLFATCTWLIWKERQSTIHNGQHFKQV 894 K+T + + +K+ + L + + + F W IW ER ++ G Sbjct: 262 KLTTFYDDVKQMAHQDMLSALQELALSRGKEDLAQFIAVCWAIWHERNLSVLEGNQNSPQ 321 Query: 895 DILEKAEGLLLNFQKLNKKMCGDREDPSHSPATKWSLPPAGKLRLDVDACVNEHKHSFGI 1074 +A ++ +++++ + S W PP +++VDA V Sbjct: 322 ITAARATAIVESYRRIKQPKIPAMLTHRQSENKNWKPPPKNWFKVNVDAAVK-------- 373 Query: 1075 GGVVRDDSNNLVLAFGRNICYQGSVLESELLALKEGLEMCVSAGIRPNIIASDSLLAVQA 1254 S+L A + CV P II SDSL V Sbjct: 374 --------------------------MSDLQAAHQA--KCV-----PFIIESDSLEVVDL 400 Query: 1255 VTEGGEADNYCNEKVQKIRFLLNSAQDAVVIHVRRSANSVADSLAKFVALSRTPFVW 1425 + + +++I+ L + + + + R NS+A S AK P +W Sbjct: 401 SKNRKRSLAEISWTIKEIQSSLKNQSQSSIQFIPRLCNSIAHSTAKVALEYEHPVLW 457 >ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein At1g65750-like [Vitis vinifera] Length = 820 Score = 207 bits (528), Expect = 7e-51 Identities = 138/484 (28%), Positives = 224/484 (46%), Gaps = 8/484 (1%) Frame = +1 Query: 1 LAKQIWRIIKNPGSLMAKILKFRYFKHCDIMSAPVGNNPSYIWRSLCWSRDILDRGLYWK 180 LAKQ WR ++NP SL+ +I + RYF++ ++A +G+NPSY+WRS+ ++ +L RG YW Sbjct: 334 LAKQGWRFLRNPDSLVTRIFQARYFRNSSFLNAELGSNPSYMWRSILAAQGLLKRGCYWS 393 Query: 181 VGDGRSISITQDKWIPSRTEPWKLISSRDQA---KEKVSDLIKDGTWDVQLVATLFPNFM 351 + G + + D W+P + +LI + A KV +LI +G W + F Sbjct: 394 IASGTKVQVWGDSWLPDSSN--RLIITPPVAGFDGIKVDELITEGLWREDFIRDKFMARD 451 Query: 352 AQEICEIPIPHPPVPDSRYWKFDAKGVYSVREGYKHAIGCFNTPDNQSYNEISK--WWKR 525 A I IP+P D W FDA+G Y+ R GY A+ CF +++ W + Sbjct: 452 ADLILSIPLPMSSREDQISWSFDARGEYTARSGY-GALRCFRQSTALVASDVDSNFVWAQ 510 Query: 526 LWAMNVPPKIKIFWWRLANDFIHSGANLKAHHIPNTGTCRLCNFHLDSTIHSLFLCPDIK 705 LW + PPKI F WR A + + + L H+ C +C L++T+H+L C + Sbjct: 511 LWKVTAPPKILNFAWRAARNCLPTRFALTIRHVDTPMCCPICRSELETTLHALVECVAAR 570 Query: 706 RTWKMTPYANLIKRAKNGTTLDLCCWMIKNLANGEFDLFA---TCTWLIWKERQSTIHNG 876 W + A L + G+ +D W+ A +F +FA W +W R + NG Sbjct: 571 DVWDESGLAML--QGNFGSFVD---WLATMFAYCDFVVFAKYLAVCWGLWWRRNDVVWNG 625 Query: 877 QHFKQVDILEKAEGLLLNFQKLNKKMCGDREDPSHSPATKWSLPPAGKLRLDVDACVNEH 1056 + + ++ +L ++ N+ + PS+S +KW P G ++++VD V Sbjct: 626 RIWHSQQVVNGCFTMLESWFHANETLATAVTVPSYS--SKWQKPDYGWIKINVDGAVFPD 683 Query: 1057 KHSFGIGGVVRDDSNNLVLAFGRNICYQGSVLESELLALKEGLEMCVSAGIRPNIIASDS 1236 K + IG V RD + F + +Q E L ++E L ++ +D Sbjct: 684 KGA--IGAVFRDHQGRFMGGFAKPFPHQTLPKVVEALGVREVLSWIHERSRSRIVVETDC 741 Query: 1237 LLAVQAVTEGGEADNYCNEKVQKIRFLLNSAQDAVVIHVRRSANSVADSLAKFVALSRTP 1416 L VQA+ + + +L D V++ RRSANS A LA + Sbjct: 742 LRVVQAIQHKSCPNTSFGFIIVDCLDVLQHLVDVQVVYARRSANSAAHCLANGACSFTSL 801 Query: 1417 FVWG 1428 +WG Sbjct: 802 HIWG 805 >emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1369 Score = 204 bits (519), Expect = 8e-50 Identities = 143/508 (28%), Positives = 246/508 (48%), Gaps = 17/508 (3%) Frame = +1 Query: 1 LAKQIWRIIKNPGSLMAKILKFRYFKHCDIMSAPVGNNPSYIWRSLCWSRDILDRGLYWK 180 LAKQ WRI+ P SLMA+++K +YF + + A V N S+ +S+ +R ++ +G+ Sbjct: 875 LAKQAWRILTKPDSLMARVIKGKYFPRSNFLEARVSPNMSFTCKSILSARAVIQKGMCRV 934 Query: 181 VGDGRSISITQDKWIPSRTEPWKLIS----SRDQAKEKVSDLIKDGTWDVQLVATLFPNF 348 +GDGR +I D W+PS E + + + S D +KV +LI + W+V+L+ TLF + Sbjct: 935 IGDGRDTTIWGDPWVPS-LERYSIAATEGVSEDDGPQKVCELISNDRWNVELLNTLFQPW 993 Query: 349 MAQEICEIPIPHPPVPDSRYWKFDAKGVYSVREGYKH-AIGCFNTPDNQSYNEISKWWKR 525 + I IP+ PD W G ++VR Y H + T + S K W++ Sbjct: 994 ESTAIQRIPVALQKKPDQWMWMMSKNGQFTVRSAYYHELLEDRKTGPSTSRGPNLKLWQK 1053 Query: 526 LWAMNVPPKIKIFWWRLANDFIHSGANLKAHHIPNTGTCRLCNFHLDSTIHSLFLCPDIK 705 +W +PPK+K+F W+ ++ + N++ + G C C ++T H ++ C + Sbjct: 1054 IWKAKIPPKVKLFSWKAIHNGLAVYTNMRKRGMNIDGACPRCGEKEETTEHLIWGCDESS 1113 Query: 706 RTWKMTPYANLIKRAKNGTTLDLCCWMIKNLANGEFD-----LFATCTWLIWKERQSTIH 870 R W ++P + G+ W +++L + D LF W IW R + Sbjct: 1114 RAWYISPLRIHTGNIEAGS---FRIW-VESLLDTHKDTEWWALFWMICWNIWLGRNKWVF 1169 Query: 871 NGQHFKQVDILEKAEGLLLNFQKLNKKMCGDRE--DPSHSPATKWSLPPAGKLRLDVDAC 1044 + +++E+A ++ F+ + C + ++ WS+PP G ++L+VDA Sbjct: 1170 EKKKLAFQEVVERAVRGVMEFE----EECAHTSPVETLNTHENGWSVPPVGMVKLNVDAA 1225 Query: 1045 VNEHKHSFGIGGVVRDDSNNLVLAFGRNICYQGSVLE----SELLALKEGLEMCVSAGIR 1212 V +H G+GGVVRD +++LA C G +E +E +L+ GL++ AG R Sbjct: 1226 VFKHV-GIGMGGVVRDAEGDVLLA----TCCGGWAMEDPAMAEACSLRYGLKVAYEAGFR 1280 Query: 1213 PNIIASD-SLLAVQAVTEGGEADNYCNEKVQKIRFLLNSAQDAVVIHVRRSANSVADSLA 1389 ++ D L +Q + + + V I +L + + V HV+R N VA LA Sbjct: 1281 NLVVEMDCKKLFLQLRGKASDVTPF-GRVVDDILYLASKCSNVVFEHVKRHCNKVAHLLA 1339 Query: 1390 KFVALSRTPFVWGKEMFPLWLKELVLLD 1473 + + VW +E +P + VLLD Sbjct: 1340 QMCKNAMEKRVWLEE-YPSEVSSAVLLD 1366 >ref|XP_006482369.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus sinensis] Length = 494 Score = 204 bits (518), Expect = 1e-49 Identities = 117/423 (27%), Positives = 199/423 (47%), Gaps = 2/423 (0%) Frame = +1 Query: 1 LAKQIWRIIKNPGSLMAKILKFRYFKHCDIMSAPVGNNPSYIWRSLCWSRDILDRGLYWK 180 +AKQ WR+I+NP SL A++LK RY D + A +G+NPSYIWRS+ W R ++ G W+ Sbjct: 62 VAKQSWRLIQNPESLAARVLKARYLPKTDFLRASIGSNPSYIWRSIMWGRQVIHNGHRWR 121 Query: 181 VGDGRSISITQDKWIPSRTEPWKLISSRDQAKEKVSDLIKDGTWDVQLVATLFPNFMAQE 360 +G+ IS+ +D + W L+ F A+ Sbjct: 122 IGNREKISVYRD---------------------------NENNWKTDLIQQNFVKEDAKA 154 Query: 361 ICEIPIPHPPVPDSRYWKFDAKGVYSVREGYKHAIGC-FNTPDNQSYNEISKWWKRLWAM 537 IP+P D W +D +G Y+++ GY+ A+ F N S + S W +W + Sbjct: 155 DQSIPLPRRQSEDEVIWHYDKRGKYTMKSGYQVALKLKFPYSPNCSNSSSSSNWSVIWKL 214 Query: 538 NVPPKIKIFWWRLANDFIHSGANLKAHHIPNTGTCRLCNFHLDSTIHSLFLCPDIKRTWK 717 +P KIKIF WR A + + + NL I + C+ C +++T+H+L C K+ W+ Sbjct: 215 TLPAKIKIFIWRAAKNLLPTAENLWKRKIVHEAYCKRCGNRVENTLHALITCKAAKKVWQ 274 Query: 718 MTPYANLIKRAKNGTTL-DLCCWMIKNLANGEFDLFATCTWLIWKERQSTIHNGQHFKQV 894 ++P A+ + N L DL K L+ + ++ T W+IW +R + Sbjct: 275 LSPMASSFQEMGNPDILGDLGG---KKLSRADMEMLMTILWVIWYDRNKLVFEDLKLDPR 331 Query: 895 DILEKAEGLLLNFQKLNKKMCGDREDPSHSPATKWSLPPAGKLRLDVDACVNEHKHSFGI 1074 + KAE + F++ + T W+ PP G L+L+VDA + +K G+ Sbjct: 332 LSMAKAEAINEAFRRTQFPEITNEGKLQKLKQTVWTPPPQGWLKLNVDATTDSNKSCAGL 391 Query: 1075 GGVVRDDSNNLVLAFGRNICYQGSVLESELLALKEGLEMCVSAGIRPNIIASDSLLAVQA 1254 G ++RD + + A + + + G V E A + +++ G++ I+ +DS V Sbjct: 392 GAIIRDSTGKCMAAGIKTVKFSGVVSRVEAEATEWAVQIAQQLGMQSIILETDSQEVVDL 451 Query: 1255 VTE 1263 + + Sbjct: 452 IND 454 >ref|XP_004308707.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria vesca subsp. vesca] Length = 498 Score = 204 bits (518), Expect = 1e-49 Identities = 140/503 (27%), Positives = 234/503 (46%), Gaps = 9/503 (1%) Frame = +1 Query: 1 LAKQIWRIIKNPGSLMAKILKFRYFKHCDIMSAPVGNNPSYIWRSLCWSRDILDRGLYWK 180 LAKQ WRI+KNP SL+A+I K RY+ +C A + ++PS+ WRS+ SR +L G++WK Sbjct: 2 LAKQAWRIVKNPNSLVAQIFKARYYPYCSFWEANLSDSPSFSWRSIVQSRPVLAAGVHWK 61 Query: 181 VGDGRSISITQDKWIPSRTEPWKLISSRDQAKEKVSDLIK--DGTWDVQLVATLFPNFMA 354 VGDG I I D WIP +++ + + V +LI TW+VQ++++LFP + Sbjct: 62 VGDGTQIQIWTDDWIP-EVPRYRVHKPPNCEIQFVHELINHDSRTWNVQVISSLFPPDIT 120 Query: 355 QEICEIPIPHPPVPDSRYWKFDAKGVYSVREGY---KHAIGCFNTPDNQSYNEISKWWKR 525 +IC IP+ + D WK + +G Y+V+ Y + + S N WK+ Sbjct: 121 LQICSIPLSRRVLTDRVIWKPEKRGFYTVKSAYWIARSTVMPNALASTSSGNAFLPLWKK 180 Query: 526 LWAMNVPPKIKIFWWRLANDFIHSGANLKAHHIPNTGTCRLCNFHLDSTIHSLFLCPDIK 705 LW VP K+ WR +D + + A L T C C ++T H + CP I Sbjct: 181 LWKARVPGKVMHCAWRACHDLLPTRAKLVTKGYEGTLKCLSCPHPCETTAHLVCACP-IA 239 Query: 706 RTWKMTPYANLIKRAKNGTTLDLCCWMIK---NLANGEFDLFATCTWLIWKERQSTIHNG 876 +T + + N+ + + WM++ +L++ +F W +W+ R + + + Sbjct: 240 QTILLGSHLNI--TVLMSSIFNFKEWMLEQATSLSDDKFQKLLMIIWGLWRNRNNMLWSD 297 Query: 877 QHFKQVDILEKAEGLLLNFQKLNKKMCGDREDPSH-SPATKWSLPPAGKLRLDVDACVNE 1053 + +I+ F +N ++ PS S KW P L+L+VD Sbjct: 298 KQQTAQEIICGTMSWYHEFTTINY----PQQKPSKTSQRVKWFPPAVDHLKLNVDGAFMP 353 Query: 1054 HKHSFGIGGVVRDDSNNLVLAFGRNICYQGSVLESELLALKEGLEMCVSAGIRPNIIASD 1233 ++ G+GG++RD+ +V AF ++I S ++EL A++ GL + I+ +D Sbjct: 354 NETEGGVGGILRDNQGIVVAAFTKHISGINSANQAELKAIRAGLIWLKTYNFHNCILETD 413 Query: 1234 SLLAVQAVTEGGEADNYCNEKVQKIRFLLNSAQDAVVIHVRRSANSVADSLAKFVALSRT 1413 +AV V + I LL D + R+A + A LA A Sbjct: 414 CQVAVNEVQLQDYISLEYGNIIDDIHELLEGFDDVYISFAPRTAKAAAHRLAS-DAFESV 472 Query: 1414 PFVWGKEMFPLWLKELVLLDVNS 1482 +V + P L++ + D N+ Sbjct: 473 GYVQWMDAIPYMLRDTLKHDCNN 495 >gb|EEE52627.1| hypothetical protein OsJ_34967 [Oryza sativa Japonica Group] Length = 1395 Score = 199 bits (506), Expect = 3e-48 Identities = 139/479 (29%), Positives = 223/479 (46%), Gaps = 15/479 (3%) Frame = +1 Query: 1 LAKQIWRIIKNPGSLMAKILKFRYFKHCDIMSAPVGNNPSYIWRSLCWSRDILDRGLYWK 180 LAKQ+WR++ +P SL A++L+ RY++ +++A + + SY W+S+ +G W+ Sbjct: 360 LAKQVWRLLSDPDSLCARVLRARYYRDGKLLNARMKSGSSYTWQSILAGLQCFKQGYIWR 419 Query: 181 VGDGRSISITQDKWIPSRTEPWKLISSR-DQAKEKVSDLIK--DGTWDVQLVATLFPNFM 351 VGDG I I +D WIP + K+ ++R + V +LI + TW L+ T+F Sbjct: 420 VGDGTQIKIWEDNWIPG-SHNMKIQTNRGNNLVATVDELIDPINFTWGGDLLKTIFWPID 478 Query: 352 AQEICEIPIPHPPVPDSRYWKFDAKGVYSVREGY----KHAIGCFNTPDNQSYNEISKWW 519 I +IPI D W+++ G +SV+ Y + G + S S+ W Sbjct: 479 VCRIMQIPI-RAGRDDLVAWQYNRSGTFSVKSAYHCQWDYKFGERSAQMQASTASRSRLW 537 Query: 520 KRLWAMNVPPKIKIFWWRLANDFIHSGANLKAHHIPNTGTCRLCNFHLDSTIHSLFLCPD 699 KRLW + VP KIKIF WR + A L H+ ++G C +C + H +F C Sbjct: 538 KRLWNLKVPAKIKIFGWRALKGLVPCRAILANRHVGDSGGCPVCQNGPEDIKHMIFTCAR 597 Query: 700 IKRTWKMTPYANLIKR----AKNGTTL--DLCCW--MIKNLANGEFDLFATCTWLIWKER 855 K+ W + I+R ++G+ + ++ +++L G +L T W IW ER Sbjct: 598 AKQVWNSLGVEDRIQRLCMTERSGSVILEEILIREDQVQDLQVGFAELVITAAWYIWWER 657 Query: 856 QSTIHNGQHFKQVDILEKAEGLLLNFQKLNKKMCGDREDPSHSPATKWSLPPAGKLRLDV 1035 + +H + L N++ KK R+ W PP GK+ ++V Sbjct: 658 RQLVHGEAVQRPARSGMAIAALTKNYKLATKKDSVLRQG--------WKKPPEGKVMVNV 709 Query: 1036 DACVNEHKHSFGIGGVVRDDSNNLVLAFGRNICYQGSVLESELLALKEGLEMCVSAGIRP 1215 DA +E +G V+RD S ++ A + + +E ALKEGL + G Sbjct: 710 DAGFDEMGGCGTVGSVIRDCSGGVLAAAHSFVPHLVDAPMAEAFALKEGLMLAQQIGCNR 769 Query: 1216 NIIASDSLLAVQAVTEGGEADNYCNEKVQKIRFLLNSAQDAVVIHVRRSANSVADSLAK 1392 II SD + VQ +T+GG N + L + D + H R AN VA +LA+ Sbjct: 770 LIIQSDCMEVVQIMTDGGFTANSAAAIYEDCNILWSGFADITIEHCSREANQVAHNLAR 828