BLASTX nr result

ID: Rehmannia25_contig00005517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00005517
         (751 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF64710.1| putative transposase [Ipomoea tricolor]                39   6e-11
ref|XP_004503835.1| PREDICTED: uncharacterized protein LOC101511...    37   1e-07
ref|XP_003628568.1| Replication factor A protein [Medicago trunc...    42   8e-07
gb|ESW18047.1| hypothetical protein PHAVU_006G008900g [Phaseolus...    34   2e-06
gb|AFK33968.1| unknown [Lotus japonicus]                               38   2e-06
gb|ESW21756.1| hypothetical protein PHAVU_005G096800g [Phaseolus...    36   2e-06
gb|ESW33865.1| hypothetical protein PHAVU_001G105000g [Phaseolus...    35   8e-06

>dbj|BAF64710.1| putative transposase [Ipomoea tricolor]
          Length = 517

 Score = 38.9 bits (89), Expect(3) = 6e-11
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
 Frame = +1

Query: 1   GSFWISATIFSFIG--DWWYLSCKR--CPRKITRTGDKFYCEHCDKFSQTGNFR 150
           G FW++A I       DW+Y+SCK   C +K+T     + C+ C +  Q G  R
Sbjct: 291 GDFWVAAKIVGIESSWDWFYVSCKSHGCNKKLTLRNTLYDCDKCKRTWQEGILR 344



 Score = 38.1 bits (87), Expect(3) = 6e-11
 Identities = 14/41 (34%), Positives = 26/41 (63%)
 Frame = +2

Query: 221 RYRMQFEVGDDSANAQLLCWDRDCETLIGKSCSELKNELIE 343
           RYR++    D   NA  + WD++C  L+G S ++L+ +++E
Sbjct: 344 RYRVKVRAVDLDGNAPFILWDKECTELLGISATDLRQKILE 384



 Score = 36.2 bits (82), Expect(3) = 6e-11
 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
 Frame = +3

Query: 411 TSSKQK--EGWEDLPDELASLVDRKALFKVQVKANQVKHFTGAFSVMRLTTDANLLKKY 581
           T  +QK  EG   +P E+ SLV    LF++ V+  Q  +   AF+VM++  D  L+  Y
Sbjct: 376 TDLRQKILEGPLRIPREIESLVGLAMLFRIAVRKEQFDNLHNAFAVMKVMNDPKLVSVY 434


>ref|XP_004503835.1| PREDICTED: uncharacterized protein LOC101511049 [Cicer arietinum]
          Length = 351

 Score = 37.0 bits (84), Expect(3) = 1e-07
 Identities = 15/48 (31%), Positives = 31/48 (64%)
 Frame = +3

Query: 438 EDLPDELASLVDRKALFKVQVKANQVKHFTGAFSVMRLTTDANLLKKY 581
           + +P E+  LV+++ LFK++ K +   +F  +F V +L  D +++KK+
Sbjct: 241 DTVPKEIGDLVEKQFLFKIEAKNDVNSNFEKSFRVKKLCGDLDIIKKF 288



 Score = 33.1 bits (74), Expect(3) = 1e-07
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +1

Query: 40  GDWWYLSCKRCPRKITRTGDKFYCEHCDKFSQT 138
           GDWWY +C  C + +     +F+C  C K+  T
Sbjct: 161 GDWWYGACV-CNKGVVIESKRFFCSKCKKYVWT 192



 Score = 32.0 bits (71), Expect(3) = 1e-07
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +2

Query: 221 RYRMQFEVGDDSANAQLLCWDRDCETLIGKSCSELKNEL 337
           RYR++  V DD+ +A  + +D D  +L  KSC  L +E+
Sbjct: 196 RYRIKVRVVDDTDSATFVIFDHDGISLTNKSCLNLLHEM 234


>ref|XP_003628568.1| Replication factor A protein [Medicago truncatula]
           gi|355522590|gb|AET03044.1| Replication factor A protein
           [Medicago truncatula]
          Length = 559

 Score = 42.0 bits (97), Expect(3) = 8e-07
 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
 Frame = +1

Query: 1   GSFWISATIFSFIG--DWWYLSCKRCPRKITRTGDKFYCEHCDK 126
           G F +SA +  F+   +WWY +CK C R +T     +YC+ CDK
Sbjct: 271 GFFVVSAIVSGFVEGEEWWYPACK-CHRSVTADSGAYYCKGCDK 313



 Score = 30.0 bits (66), Expect(3) = 8e-07
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = +3

Query: 447 PDELASLVDRKALFKVQVKANQVKHFTGAFSVMRLTTDANLLKKYA 584
           P E+  L  ++ LFKV         F G++ V R+  D++++ K+A
Sbjct: 368 PPEIVMLKGKRFLFKVDKPVISGGFFDGSYRVKRVCADSSIVAKFA 413



 Score = 26.9 bits (58), Expect(3) = 8e-07
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +2

Query: 221 RYRMQFEVGDDSANAQLLCWDRDCETLIGKSCSEL 325
           RY+++  V D + ++  + +D D   L+ K CS L
Sbjct: 321 RYKIKLRVDDGTGDSVFVLFDSDVHYLLEKQCSVL 355


>gb|ESW18047.1| hypothetical protein PHAVU_006G008900g [Phaseolus vulgaris]
          Length = 308

 Score = 34.3 bits (77), Expect(3) = 2e-06
 Identities = 14/37 (37%), Positives = 24/37 (64%)
 Frame = +2

Query: 215 T*RYRMQFEVGDDSANAQLLCWDRDCETLIGKSCSEL 325
           T RY++Q  V DD+ +   + +DR+  +L+ KSC E+
Sbjct: 225 TLRYKVQLRVIDDTDSTTFMLFDREASSLLSKSCVEM 261



 Score = 32.3 bits (72), Expect(3) = 2e-06
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +1

Query: 4   SFWISATIFSFIGD--WWYLSCKRCPRKITRTGDKFYCEHCDK 126
           +F + ATI   + D  WWY +C  C + +      F+CE C+K
Sbjct: 178 TFIVLATIKHVVDDDDWWYTACI-CNKTVYPDSKMFFCEKCNK 219



 Score = 31.2 bits (69), Expect(3) = 2e-06
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = +3

Query: 417 SKQKEGWEDLPDELASLVDRKALFKVQVKANQVKHFTGAFSVMRL 551
           S  K G  +LP+E A ++++K LFKV  K ++   F   F V +L
Sbjct: 264 SHDKNG--NLPNEFAQILEKKVLFKVDSKMDKGFRFEQTFRVKKL 306


>gb|AFK33968.1| unknown [Lotus japonicus]
          Length = 303

 Score = 38.1 bits (87), Expect(3) = 2e-06
 Identities = 17/37 (45%), Positives = 23/37 (62%)
 Frame = +2

Query: 215 T*RYRMQFEVGDDSANAQLLCWDRDCETLIGKSCSEL 325
           T R+R++FEV D    A    +D DCE ++ KSC EL
Sbjct: 160 TPRFRIKFEVSDGDEVATFAIFDTDCENMLKKSCREL 196



 Score = 32.7 bits (73), Expect(3) = 2e-06
 Identities = 11/48 (22%), Positives = 30/48 (62%)
 Frame = +3

Query: 438 EDLPDELASLVDRKALFKVQVKANQVKHFTGAFSVMRLTTDANLLKKY 581
           E+ PDE+ +L+ ++A+FKV+   +    +  ++ V ++  D ++++ +
Sbjct: 206 EEYPDEIKALIGKEAIFKVEKSIDHGMKYDDSYKVKKICDDLSIIQLF 253



 Score = 26.9 bits (58), Expect(3) = 2e-06
 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = +1

Query: 1   GSFWISATIFSFI-GDWWYLSCKRCPRKITRTGDKFYCEHC 120
           G F I A I   + G+ W+ +  RC R +T     ++C  C
Sbjct: 112 GLFLILAEISGLVDGEKWWYTSCRCRRSVTIEDGIYFCASC 152


>gb|ESW21756.1| hypothetical protein PHAVU_005G096800g [Phaseolus vulgaris]
          Length = 457

 Score = 36.2 bits (82), Expect(3) = 2e-06
 Identities = 15/35 (42%), Positives = 24/35 (68%)
 Frame = +2

Query: 221 RYRMQFEVGDDSANAQLLCWDRDCETLIGKSCSEL 325
           RY+++  V D++ +   + +DRD  TLI KSC+EL
Sbjct: 287 RYKLKLRVIDETNSTTFVLFDRDATTLINKSCAEL 321



 Score = 33.9 bits (76), Expect(3) = 2e-06
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +1

Query: 4   SFWISATIFSFIGD--WWYLSCKRCPRKITRTGDKFYCEHCDK 126
           +F I ATI   + D  WWY +C  C + +      F+CE C+K
Sbjct: 238 TFVILATIKHIVADDDWWYTTCL-CGKAVYPDSKMFFCEKCNK 279



 Score = 27.3 bits (59), Expect(3) = 2e-06
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = +3

Query: 444 LPDELASLVDRKALFKVQVKANQVKHFTGAFSVMRLTTDANLLKKY 581
           LP +   L+D+  LFKV     Q   F  +F V ++  D + ++++
Sbjct: 334 LPKDFDLLIDKVVLFKVGCVKYQYLRFDQSFRVKKVCIDDSTIQRF 379


>gb|ESW33865.1| hypothetical protein PHAVU_001G105000g [Phaseolus vulgaris]
          Length = 405

 Score = 35.0 bits (79), Expect(3) = 8e-06
 Identities = 15/35 (42%), Positives = 23/35 (65%)
 Frame = +2

Query: 221 RYRMQFEVGDDSANAQLLCWDRDCETLIGKSCSEL 325
           RY+++  V D + +   + +DRD  TLI KSC+EL
Sbjct: 237 RYKLKVRVIDKTDSTTFILFDRDATTLINKSCAEL 271



 Score = 31.6 bits (70), Expect(3) = 8e-06
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 43  DWWYLSCKRCPRKITRTGDKFYCEHCDK 126
           DWWY +C  C + +      F+CE C+K
Sbjct: 203 DWWYTACL-CGKVVYPDSKMFFCEKCNK 229



 Score = 28.9 bits (63), Expect(3) = 8e-06
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +3

Query: 444 LPDELASLVDRKALFKVQVKANQVKHFTGAFSVMRLTTDANLLKKY 581
           LP E   L+D+  LFKV    +Q   F  +F V ++  D   ++++
Sbjct: 284 LPKEFDLLIDKVVLFKVGCVKDQSLRFDQSFRVKKVCIDDTTIQRF 329


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