BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00005441
         (329 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311618.2| photosystem I 20kD family protein [Populus t...    64   3e-08
gb|EPS62726.1| hypothetical protein M569_12065 [Genlisea aurea]        64   3e-08
sp|P29302.1|PSAD_NICSY RecName: Full=Photosystem I reaction cent...    64   3e-08
gb|ABK96014.1| unknown [Populus trichocarpa]                           64   3e-08
emb|CAL25356.1| photosystem I reaction center subunit II [Platan...    62   6e-08
gb|EOX94742.1| Photosystem I subunit D-2 [Theobroma cacao]             62   8e-08
ref|XP_004134141.1| PREDICTED: photosystem I reaction center sub...    62   8e-08
ref|XP_002516772.1| Photosystem I reaction center subunit II, ch...    62   8e-08
gb|ABK96621.1| unknown [Populus trichocarpa x Populus deltoides]       62   8e-08
gb|ABK96248.1| unknown [Populus trichocarpa x Populus deltoides]       62   8e-08
ref|XP_006306434.1| hypothetical protein CARUB_v10012376mg [Caps...    62   1e-07
ref|XP_006288687.1| hypothetical protein CARUB_v10001997mg [Caps...    62   1e-07
ref|XP_003556041.1| PREDICTED: photosystem I reaction center sub...    62   1e-07
pdb|3LW5|D Chain D, Improved Model Of Plant Photosystem I              62   1e-07
ref|XP_006419899.1| hypothetical protein CICLE_v10005892mg [Citr...    62   1e-07
ref|NP_001235355.1| photosystem I subunit PsaD [Glycine max] gi|...    62   1e-07
ref|XP_004296896.1| PREDICTED: photosystem I reaction center sub...    61   1e-07
ref|XP_002520727.1| Photosystem I reaction center subunit II, ch...    61   1e-07
dbj|BAA02871.1| PSI-D1 precursor [Nicotiana sylvestris]                61   2e-07
ref|XP_002315779.1| photosystem I 20kD family protein [Populus t...    60   2e-07

>ref|XP_002311618.2| photosystem I 20kD family protein [Populus trichocarpa]
           gi|550333111|gb|EEE88985.2| photosystem I 20kD family
           protein [Populus trichocarpa]
          Length = 204

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 30/33 (90%), Positives = 30/33 (90%)
 Frame = -3

Query: 327 NAGRTGVGQNMRSIGKNASPIEVKFTGKQVYDL 229
           N GR GVGQN RSIGKNASPIEVKFTGKQVYDL
Sbjct: 172 NPGRQGVGQNFRSIGKNASPIEVKFTGKQVYDL 204


>gb|EPS62726.1| hypothetical protein M569_12065 [Genlisea aurea]
          Length = 196

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 29/33 (87%), Positives = 30/33 (90%)
 Frame = -3

Query: 327 NAGRTGVGQNMRSIGKNASPIEVKFTGKQVYDL 229
           NAGRTGVGQN RSIGKN SPIEVKFTGKQ YD+
Sbjct: 164 NAGRTGVGQNFRSIGKNVSPIEVKFTGKQTYDV 196


>sp|P29302.1|PSAD_NICSY RecName: Full=Photosystem I reaction center subunit II,
           chloroplastic; AltName: Full=Photosystem I 20 kDa
           subunit; Short=PSI-D; Flags: Precursor
           gi|19748|emb|CAA42623.1| PSI-D2 [Nicotiana sylvestris]
          Length = 204

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 30/33 (90%), Positives = 30/33 (90%)
 Frame = -3

Query: 327 NAGRTGVGQNMRSIGKNASPIEVKFTGKQVYDL 229
           NAGR GVGQN RSIGKN SPIEVKFTGKQVYDL
Sbjct: 172 NAGRQGVGQNFRSIGKNKSPIEVKFTGKQVYDL 204


>gb|ABK96014.1| unknown [Populus trichocarpa]
          Length = 97

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 30/33 (90%), Positives = 30/33 (90%)
 Frame = -3

Query: 327 NAGRTGVGQNMRSIGKNASPIEVKFTGKQVYDL 229
           N GR GVGQN RSIGKNASPIEVKFTGKQVYDL
Sbjct: 65  NPGRQGVGQNFRSIGKNASPIEVKFTGKQVYDL 97


>emb|CAL25356.1| photosystem I reaction center subunit II [Platanus x acerifolia]
          Length = 122

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 29/33 (87%), Positives = 30/33 (90%)
 Frame = -3

Query: 327 NAGRTGVGQNMRSIGKNASPIEVKFTGKQVYDL 229
           N GR GVGQN RSIGKNA+PIEVKFTGKQVYDL
Sbjct: 90  NPGRQGVGQNFRSIGKNANPIEVKFTGKQVYDL 122


>gb|EOX94742.1| Photosystem I subunit D-2 [Theobroma cacao]
          Length = 204

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 29/33 (87%), Positives = 29/33 (87%)
 Frame = -3

Query: 327 NAGRTGVGQNMRSIGKNASPIEVKFTGKQVYDL 229
           N GR GVGQN RSIGKN SPIEVKFTGKQVYDL
Sbjct: 172 NPGRQGVGQNFRSIGKNVSPIEVKFTGKQVYDL 204


>ref|XP_004134141.1| PREDICTED: photosystem I reaction center subunit II,
           chloroplastic-like [Cucumis sativus]
           gi|417544|sp|P32869.1|PSAD_CUCSA RecName:
           Full=Photosystem I reaction center subunit II,
           chloroplastic; AltName: Full=PS I subunit 5; AltName:
           Full=Photosystem I 20 kDa subunit; Short=PSI-D; Flags:
           Precursor gi|227772|prf||1710320A photosystem I 20kD
           protein
          Length = 207

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 29/33 (87%), Positives = 29/33 (87%)
 Frame = -3

Query: 327 NAGRTGVGQNMRSIGKNASPIEVKFTGKQVYDL 229
           N GR GVGQN RSIGKN SPIEVKFTGKQVYDL
Sbjct: 175 NPGREGVGQNFRSIGKNVSPIEVKFTGKQVYDL 207


>ref|XP_002516772.1| Photosystem I reaction center subunit II, chloroplast precursor,
           putative [Ricinus communis] gi|223543860|gb|EEF45386.1|
           Photosystem I reaction center subunit II, chloroplast
           precursor, putative [Ricinus communis]
          Length = 208

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 29/33 (87%), Positives = 29/33 (87%)
 Frame = -3

Query: 327 NAGRTGVGQNMRSIGKNASPIEVKFTGKQVYDL 229
           N GR GVGQN RSIGKN SPIEVKFTGKQVYDL
Sbjct: 176 NPGREGVGQNFRSIGKNVSPIEVKFTGKQVYDL 208


>gb|ABK96621.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 201

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 29/33 (87%), Positives = 29/33 (87%)
 Frame = -3

Query: 327 NAGRTGVGQNMRSIGKNASPIEVKFTGKQVYDL 229
           N GR GVGQN RSIGKN SPIEVKFTGKQVYDL
Sbjct: 169 NPGRQGVGQNFRSIGKNVSPIEVKFTGKQVYDL 201


>gb|ABK96248.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 166

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 29/33 (87%), Positives = 29/33 (87%)
 Frame = -3

Query: 327 NAGRTGVGQNMRSIGKNASPIEVKFTGKQVYDL 229
           N GR GVGQN RSIGKN SPIEVKFTGKQVYDL
Sbjct: 134 NPGRQGVGQNFRSIGKNVSPIEVKFTGKQVYDL 166


>ref|XP_006306434.1| hypothetical protein CARUB_v10012376mg [Capsella rubella]
           gi|482575145|gb|EOA39332.1| hypothetical protein
           CARUB_v10012376mg [Capsella rubella]
          Length = 206

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 29/33 (87%), Positives = 29/33 (87%)
 Frame = -3

Query: 327 NAGRTGVGQNMRSIGKNASPIEVKFTGKQVYDL 229
           N GR GVGQNMRSIGKN SPIEVKFTGKQ YDL
Sbjct: 174 NPGREGVGQNMRSIGKNVSPIEVKFTGKQSYDL 206


>ref|XP_006288687.1| hypothetical protein CARUB_v10001997mg [Capsella rubella]
           gi|482557393|gb|EOA21585.1| hypothetical protein
           CARUB_v10001997mg [Capsella rubella]
          Length = 202

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 29/33 (87%), Positives = 29/33 (87%)
 Frame = -3

Query: 327 NAGRTGVGQNMRSIGKNASPIEVKFTGKQVYDL 229
           N GR GVGQNMRSIGKN SPIEVKFTGKQ YDL
Sbjct: 170 NPGREGVGQNMRSIGKNVSPIEVKFTGKQSYDL 202


>ref|XP_003556041.1| PREDICTED: photosystem I reaction center subunit II,
           chloroplastic-like [Glycine max]
          Length = 203

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 29/33 (87%), Positives = 29/33 (87%)
 Frame = -3

Query: 327 NAGRTGVGQNMRSIGKNASPIEVKFTGKQVYDL 229
           NAGR GVGQN RSIGKN SPIEVKFTGKQ YDL
Sbjct: 171 NAGRQGVGQNFRSIGKNVSPIEVKFTGKQPYDL 203


>pdb|3LW5|D Chain D, Improved Model Of Plant Photosystem I
          Length = 138

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 29/33 (87%), Positives = 29/33 (87%)
 Frame = -3

Query: 327 NAGRTGVGQNMRSIGKNASPIEVKFTGKQVYDL 229
           NAGR GVGQN RSIGKN SPIEVKFTGKQ YDL
Sbjct: 106 NAGRQGVGQNFRSIGKNVSPIEVKFTGKQPYDL 138


>ref|XP_006419899.1| hypothetical protein CICLE_v10005892mg [Citrus clementina]
           gi|568872413|ref|XP_006489366.1| PREDICTED: photosystem
           I reaction center subunit II, chloroplastic [Citrus
           sinensis] gi|157678730|dbj|BAF80470.1| PSI reaction
           center subunit II [Citrus sinensis]
           gi|157678958|dbj|BAF80477.1| PSI reaction center subunit
           II [Citrus sinensis] gi|557521772|gb|ESR33139.1|
           hypothetical protein CICLE_v10005892mg [Citrus
           clementina]
          Length = 207

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 29/33 (87%), Positives = 29/33 (87%)
 Frame = -3

Query: 327 NAGRTGVGQNMRSIGKNASPIEVKFTGKQVYDL 229
           N GR GVGQN RSIGKN SPIEVKFTGKQVYDL
Sbjct: 175 NPGREGVGQNYRSIGKNVSPIEVKFTGKQVYDL 207


>ref|NP_001235355.1| photosystem I subunit PsaD [Glycine max]
           gi|148372347|gb|ABQ63097.1| photosystem I subunit PsaD
           [Glycine max] gi|255627695|gb|ACU14192.1| unknown
           [Glycine max]
          Length = 210

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 29/33 (87%), Positives = 29/33 (87%)
 Frame = -3

Query: 327 NAGRTGVGQNMRSIGKNASPIEVKFTGKQVYDL 229
           NAGR GVGQN RSIGKN SPIEVKFTGKQ YDL
Sbjct: 178 NAGRQGVGQNFRSIGKNVSPIEVKFTGKQPYDL 210


>ref|XP_004296896.1| PREDICTED: photosystem I reaction center subunit II,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 205

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 28/33 (84%), Positives = 29/33 (87%)
 Frame = -3

Query: 327 NAGRTGVGQNMRSIGKNASPIEVKFTGKQVYDL 229
           N GR GVGQN RSIGKN SPIEVKFTGKQVYD+
Sbjct: 173 NPGRQGVGQNFRSIGKNVSPIEVKFTGKQVYDI 205


>ref|XP_002520727.1| Photosystem I reaction center subunit II, chloroplast precursor,
           putative [Ricinus communis] gi|223540112|gb|EEF41689.1|
           Photosystem I reaction center subunit II, chloroplast
           precursor, putative [Ricinus communis]
          Length = 209

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 28/33 (84%), Positives = 29/33 (87%)
 Frame = -3

Query: 327 NAGRTGVGQNMRSIGKNASPIEVKFTGKQVYDL 229
           N GR GVGQN RSIGKN SPIEVKFTGKQVYD+
Sbjct: 177 NPGRQGVGQNFRSIGKNVSPIEVKFTGKQVYDI 209


>dbj|BAA02871.1| PSI-D1 precursor [Nicotiana sylvestris]
          Length = 214

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 28/33 (84%), Positives = 29/33 (87%)
 Frame = -3

Query: 327 NAGRTGVGQNMRSIGKNASPIEVKFTGKQVYDL 229
           N GR GVGQN RSIGKN SPIEVKFTGKQVYD+
Sbjct: 182 NPGRQGVGQNFRSIGKNKSPIEVKFTGKQVYDI 214


>ref|XP_002315779.1| photosystem I 20kD family protein [Populus trichocarpa]
           gi|118487204|gb|ABK95430.1| unknown [Populus
           trichocarpa] gi|118487687|gb|ABK95668.1| unknown
           [Populus trichocarpa] gi|222864819|gb|EEF01950.1|
           photosystem I 20kD family protein [Populus trichocarpa]
          Length = 201

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 28/33 (84%), Positives = 28/33 (84%)
 Frame = -3

Query: 327 NAGRTGVGQNMRSIGKNASPIEVKFTGKQVYDL 229
           N GR GVGQN RSIGKN SPIEVKFTGKQ YDL
Sbjct: 169 NPGRQGVGQNFRSIGKNVSPIEVKFTGKQAYDL 201