BLASTX nr result
ID: Rehmannia25_contig00004683
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00004683
(334 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ11115.1| hypothetical protein PRUPE_ppa004407mg [Prunus pe... 109 3e-22
ref|XP_002318099.2| hypothetical protein POPTR_0012s09340g [Popu... 109 4e-22
emb|CBI14894.3| unnamed protein product [Vitis vinifera] 109 4e-22
ref|XP_002275673.1| PREDICTED: pentatricopeptide repeat-containi... 109 4e-22
gb|EXB90595.1| hypothetical protein L484_008195 [Morus notabilis] 107 1e-21
ref|XP_004236307.1| PREDICTED: pentatricopeptide repeat-containi... 107 1e-21
ref|XP_006351446.1| PREDICTED: pentatricopeptide repeat-containi... 107 2e-21
ref|XP_002516878.1| pentatricopeptide repeat-containing protein,... 107 2e-21
ref|XP_004301033.1| PREDICTED: pentatricopeptide repeat-containi... 105 6e-21
ref|XP_006476940.1| PREDICTED: pentatricopeptide repeat-containi... 103 2e-20
ref|XP_006439995.1| hypothetical protein CICLE_v10019054mg [Citr... 103 2e-20
ref|XP_004152584.1| PREDICTED: pentatricopeptide repeat-containi... 103 3e-20
gb|EOY22343.1| Pentatricopeptide repeat superfamily protein isof... 102 5e-20
ref|NP_199839.1| pentatricopeptide repeat-containing protein [Ar... 101 9e-20
ref|XP_006280073.1| hypothetical protein CARUB_v10025955mg [Caps... 100 2e-19
ref|XP_002864050.1| EMB1006 [Arabidopsis lyrata subsp. lyrata] g... 99 6e-19
ref|XP_006402147.1| hypothetical protein EUTSA_v10012796mg [Eutr... 98 1e-18
ref|XP_006852253.1| hypothetical protein AMTR_s00049p00163880 [A... 96 4e-18
ref|XP_004490192.1| PREDICTED: pentatricopeptide repeat-containi... 93 4e-17
ref|XP_003540667.1| PREDICTED: pentatricopeptide repeat-containi... 91 1e-16
>gb|EMJ11115.1| hypothetical protein PRUPE_ppa004407mg [Prunus persica]
Length = 511
Score = 109 bits (273), Expect = 3e-22
Identities = 53/63 (84%), Positives = 59/63 (93%)
Frame = -1
Query: 334 AYVRVRDFKRAFFYHKQMVKSGQVPDARSYQKLRAILDVKAKIKNRKDKSALMGIIKSSM 155
AYVRVRDFKRAFFYHKQMVKSGQ+PDARSY+KLRAILDVKA KN+KD+SA++GII S M
Sbjct: 423 AYVRVRDFKRAFFYHKQMVKSGQMPDARSYEKLRAILDVKAARKNKKDRSAILGIINSKM 482
Query: 154 GLL 146
GLL
Sbjct: 483 GLL 485
>ref|XP_002318099.2| hypothetical protein POPTR_0012s09340g [Populus trichocarpa]
gi|550326735|gb|EEE96319.2| hypothetical protein
POPTR_0012s09340g [Populus trichocarpa]
Length = 722
Score = 109 bits (272), Expect = 4e-22
Identities = 52/63 (82%), Positives = 59/63 (93%)
Frame = -1
Query: 334 AYVRVRDFKRAFFYHKQMVKSGQVPDARSYQKLRAILDVKAKIKNRKDKSALMGIIKSSM 155
AYVRVRDF+RAFFYHK MVKSG+VPDA+SYQKLRAILDVKA IKNR+DKSA++GII S M
Sbjct: 632 AYVRVRDFRRAFFYHKMMVKSGKVPDAKSYQKLRAILDVKAAIKNRRDKSAILGIINSQM 691
Query: 154 GLL 146
G+L
Sbjct: 692 GML 694
>emb|CBI14894.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 109 bits (272), Expect = 4e-22
Identities = 52/63 (82%), Positives = 59/63 (93%)
Frame = -1
Query: 334 AYVRVRDFKRAFFYHKQMVKSGQVPDARSYQKLRAILDVKAKIKNRKDKSALMGIIKSSM 155
AYVRVRDFKRAFFYHKQMVKSGQVPD +SYQKLR+ILDVKA KNRKD+SA++GI+ S+M
Sbjct: 603 AYVRVRDFKRAFFYHKQMVKSGQVPDPQSYQKLRSILDVKAATKNRKDRSAILGIVNSNM 662
Query: 154 GLL 146
GLL
Sbjct: 663 GLL 665
>ref|XP_002275673.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic [Vitis vinifera]
gi|147821419|emb|CAN76897.1| hypothetical protein
VITISV_010606 [Vitis vinifera]
Length = 692
Score = 109 bits (272), Expect = 4e-22
Identities = 52/63 (82%), Positives = 59/63 (93%)
Frame = -1
Query: 334 AYVRVRDFKRAFFYHKQMVKSGQVPDARSYQKLRAILDVKAKIKNRKDKSALMGIIKSSM 155
AYVRVRDFKRAFFYHKQMVKSGQVPD +SYQKLR+ILDVKA KNRKD+SA++GI+ S+M
Sbjct: 603 AYVRVRDFKRAFFYHKQMVKSGQVPDPQSYQKLRSILDVKAATKNRKDRSAILGIVNSNM 662
Query: 154 GLL 146
GLL
Sbjct: 663 GLL 665
>gb|EXB90595.1| hypothetical protein L484_008195 [Morus notabilis]
Length = 1505
Score = 107 bits (268), Expect = 1e-21
Identities = 51/63 (80%), Positives = 58/63 (92%)
Frame = -1
Query: 334 AYVRVRDFKRAFFYHKQMVKSGQVPDARSYQKLRAILDVKAKIKNRKDKSALMGIIKSSM 155
AYVR+RDFKRAFFYHKQMVKSGQVPDA+SY+KLR+ILDVKA KN+KDK A++GII S M
Sbjct: 624 AYVRIRDFKRAFFYHKQMVKSGQVPDAKSYEKLRSILDVKAARKNKKDKKAILGIINSKM 683
Query: 154 GLL 146
GLL
Sbjct: 684 GLL 686
>ref|XP_004236307.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Solanum lycopersicum]
Length = 706
Score = 107 bits (268), Expect = 1e-21
Identities = 51/63 (80%), Positives = 60/63 (95%)
Frame = -1
Query: 334 AYVRVRDFKRAFFYHKQMVKSGQVPDARSYQKLRAILDVKAKIKNRKDKSALMGIIKSSM 155
A++RVRD+KRAF++HKQMVK+ QVPDA SY+KLRAILDVKA IKNRKDKSALMGI++SSM
Sbjct: 620 AFIRVRDYKRAFYFHKQMVKNRQVPDAESYEKLRAILDVKAAIKNRKDKSALMGIVRSSM 679
Query: 154 GLL 146
GLL
Sbjct: 680 GLL 682
>ref|XP_006351446.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Solanum tuberosum]
Length = 716
Score = 107 bits (266), Expect = 2e-21
Identities = 50/63 (79%), Positives = 60/63 (95%)
Frame = -1
Query: 334 AYVRVRDFKRAFFYHKQMVKSGQVPDARSYQKLRAILDVKAKIKNRKDKSALMGIIKSSM 155
A++RVRD+KRAF++HKQMVK+ QVPDA SY+KLRAILDVKA IKNRKDKSALMGI++SSM
Sbjct: 629 AFIRVRDYKRAFYFHKQMVKNRQVPDAESYEKLRAILDVKAAIKNRKDKSALMGIVRSSM 688
Query: 154 GLL 146
GL+
Sbjct: 689 GLM 691
>ref|XP_002516878.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223543966|gb|EEF45492.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 714
Score = 107 bits (266), Expect = 2e-21
Identities = 49/63 (77%), Positives = 59/63 (93%)
Frame = -1
Query: 334 AYVRVRDFKRAFFYHKQMVKSGQVPDARSYQKLRAILDVKAKIKNRKDKSALMGIIKSSM 155
AY+RVRDF+RAFFYHK MVKSGQVPDA+SY+KLRAIL+ K+KIKNRKD+SA++GII S M
Sbjct: 623 AYIRVRDFRRAFFYHKTMVKSGQVPDAKSYEKLRAILEAKSKIKNRKDRSAILGIINSKM 682
Query: 154 GLL 146
G+L
Sbjct: 683 GML 685
>ref|XP_004301033.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 714
Score = 105 bits (262), Expect = 6e-21
Identities = 50/63 (79%), Positives = 57/63 (90%)
Frame = -1
Query: 334 AYVRVRDFKRAFFYHKQMVKSGQVPDARSYQKLRAILDVKAKIKNRKDKSALMGIIKSSM 155
AY+RVRDF RAFFYHK+MVKSGQVPDARSY+KLRAILDVK KN+KDKSA++GII S M
Sbjct: 621 AYIRVRDFSRAFFYHKKMVKSGQVPDARSYEKLRAILDVKLAKKNKKDKSAILGIINSKM 680
Query: 154 GLL 146
G+L
Sbjct: 681 GML 683
>ref|XP_006476940.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Citrus sinensis]
Length = 712
Score = 103 bits (258), Expect = 2e-20
Identities = 48/63 (76%), Positives = 57/63 (90%)
Frame = -1
Query: 334 AYVRVRDFKRAFFYHKQMVKSGQVPDARSYQKLRAILDVKAKIKNRKDKSALMGIIKSSM 155
A+VRVRDFKRAFFYHKQMVKSGQVPD +SY+KLR+ILDVK KNR+DKSA++GII S M
Sbjct: 622 AFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKLRSILDVKVATKNRRDKSAILGIINSKM 681
Query: 154 GLL 146
G++
Sbjct: 682 GMV 684
>ref|XP_006439995.1| hypothetical protein CICLE_v10019054mg [Citrus clementina]
gi|557542257|gb|ESR53235.1| hypothetical protein
CICLE_v10019054mg [Citrus clementina]
Length = 716
Score = 103 bits (258), Expect = 2e-20
Identities = 48/63 (76%), Positives = 57/63 (90%)
Frame = -1
Query: 334 AYVRVRDFKRAFFYHKQMVKSGQVPDARSYQKLRAILDVKAKIKNRKDKSALMGIIKSSM 155
A+VRVRDFKRAFFYHKQMVKSGQVPD +SY+KLR+ILDVK KNR+DKSA++GII S M
Sbjct: 626 AFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKLRSILDVKVATKNRRDKSAILGIINSKM 685
Query: 154 GLL 146
G++
Sbjct: 686 GMV 688
>ref|XP_004152584.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Cucumis sativus]
Length = 708
Score = 103 bits (256), Expect = 3e-20
Identities = 48/63 (76%), Positives = 57/63 (90%)
Frame = -1
Query: 334 AYVRVRDFKRAFFYHKQMVKSGQVPDARSYQKLRAILDVKAKIKNRKDKSALMGIIKSSM 155
A+VRVRDFKRAFFYHK+MVKSGQVPD +SYQKL++ILDVK KNRKDKSA++GII S M
Sbjct: 619 AFVRVRDFKRAFFYHKKMVKSGQVPDVKSYQKLKSILDVKLATKNRKDKSAILGIINSKM 678
Query: 154 GLL 146
G++
Sbjct: 679 GMV 681
>gb|EOY22343.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
cacao] gi|508775088|gb|EOY22344.1| Pentatricopeptide
repeat superfamily protein isoform 1 [Theobroma cacao]
Length = 722
Score = 102 bits (254), Expect = 5e-20
Identities = 47/63 (74%), Positives = 58/63 (92%)
Frame = -1
Query: 334 AYVRVRDFKRAFFYHKQMVKSGQVPDARSYQKLRAILDVKAKIKNRKDKSALMGIIKSSM 155
A+VRVRDFKRAF+YHKQMVKSGQVPD +SY+KL+AILDVKA KN+KD+SA++GII S M
Sbjct: 630 AFVRVRDFKRAFYYHKQMVKSGQVPDVKSYEKLKAILDVKAAKKNKKDRSAILGIINSKM 689
Query: 154 GLL 146
G++
Sbjct: 690 GMV 692
>ref|NP_199839.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170477|sp|Q9FGR7.1|PP426_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g50280, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1006; Flags: Precursor
gi|9759030|dbj|BAB09399.1| unnamed protein product
[Arabidopsis thaliana] gi|332008538|gb|AED95921.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 723
Score = 101 bits (252), Expect = 9e-20
Identities = 52/86 (60%), Positives = 59/86 (68%)
Frame = -1
Query: 334 AYVRVRDFKRAFFYHKQMVKSGQVPDARSYQKLRAILDVKAKIKNRKDKSALMGIIKSSM 155
A+VRVRDFKRAFFYHK MVKSGQVPD RSY+KLRAIL+ KAK KNRKDK+A++GII S
Sbjct: 634 AFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAILEDKAKTKNRKDKTAILGIINSKF 693
Query: 154 GLLXXXXXXXXXXXXXXXXKRTRMPG 77
G + RT PG
Sbjct: 694 GRVKAKTKGKKDEFWKYKTNRTTSPG 719
>ref|XP_006280073.1| hypothetical protein CARUB_v10025955mg [Capsella rubella]
gi|482548777|gb|EOA12971.1| hypothetical protein
CARUB_v10025955mg [Capsella rubella]
Length = 731
Score = 100 bits (249), Expect = 2e-19
Identities = 48/61 (78%), Positives = 54/61 (88%)
Frame = -1
Query: 334 AYVRVRDFKRAFFYHKQMVKSGQVPDARSYQKLRAILDVKAKIKNRKDKSALMGIIKSSM 155
A+VRVRDFKRAFFYHK MVKSGQVPD RSY+KLRAIL+ KAK KNRKDK+A++GII S
Sbjct: 642 AFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAILEDKAKTKNRKDKTAILGIINSKF 701
Query: 154 G 152
G
Sbjct: 702 G 702
>ref|XP_002864050.1| EMB1006 [Arabidopsis lyrata subsp. lyrata]
gi|297309885|gb|EFH40309.1| EMB1006 [Arabidopsis lyrata
subsp. lyrata]
Length = 723
Score = 99.0 bits (245), Expect = 6e-19
Identities = 47/61 (77%), Positives = 53/61 (86%)
Frame = -1
Query: 334 AYVRVRDFKRAFFYHKQMVKSGQVPDARSYQKLRAILDVKAKIKNRKDKSALMGIIKSSM 155
A+VRVRDFKRAFFYHK MVKSGQVPD RSY+KLRAIL+ K K KNRKDK+A++GII S
Sbjct: 634 AFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAILENKVKTKNRKDKTAILGIINSKF 693
Query: 154 G 152
G
Sbjct: 694 G 694
>ref|XP_006402147.1| hypothetical protein EUTSA_v10012796mg [Eutrema salsugineum]
gi|557103237|gb|ESQ43600.1| hypothetical protein
EUTSA_v10012796mg [Eutrema salsugineum]
Length = 724
Score = 97.8 bits (242), Expect = 1e-18
Identities = 48/61 (78%), Positives = 52/61 (85%)
Frame = -1
Query: 334 AYVRVRDFKRAFFYHKQMVKSGQVPDARSYQKLRAILDVKAKIKNRKDKSALMGIIKSSM 155
A+VRVRD KRAFFYHK MVKSGQVPD RSY KLRAIL+ KAK KNRKDKSA++GII S
Sbjct: 634 AFVRVRDCKRAFFYHKMMVKSGQVPDPRSYDKLRAILEDKAKTKNRKDKSAILGIINSKF 693
Query: 154 G 152
G
Sbjct: 694 G 694
>ref|XP_006852253.1| hypothetical protein AMTR_s00049p00163880 [Amborella trichopoda]
gi|548855857|gb|ERN13720.1| hypothetical protein
AMTR_s00049p00163880 [Amborella trichopoda]
Length = 733
Score = 96.3 bits (238), Expect = 4e-18
Identities = 45/63 (71%), Positives = 55/63 (87%)
Frame = -1
Query: 334 AYVRVRDFKRAFFYHKQMVKSGQVPDARSYQKLRAILDVKAKIKNRKDKSALMGIIKSSM 155
AYVRVRDFKRAF+YHKQM++S QVPD+ SY+KLRAIL+ KAK KNR D+SA++GI+ S M
Sbjct: 641 AYVRVRDFKRAFYYHKQMIESKQVPDSSSYRKLRAILEEKAKTKNRTDRSAILGIVNSKM 700
Query: 154 GLL 146
G L
Sbjct: 701 GKL 703
>ref|XP_004490192.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Cicer arietinum]
Length = 702
Score = 92.8 bits (229), Expect = 4e-17
Identities = 45/63 (71%), Positives = 53/63 (84%)
Frame = -1
Query: 334 AYVRVRDFKRAFFYHKQMVKSGQVPDARSYQKLRAILDVKAKIKNRKDKSALMGIIKSSM 155
A+VRVRDFKRAFFYHKQMV+SGQV + SYQKLRAIL+VKA KN+ DK AL+GII M
Sbjct: 620 AFVRVRDFKRAFFYHKQMVESGQVMELSSYQKLRAILEVKAADKNKSDKVALLGIINKKM 679
Query: 154 GLL 146
G++
Sbjct: 680 GIM 682
>ref|XP_003540667.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 711
Score = 91.3 bits (225), Expect = 1e-16
Identities = 41/63 (65%), Positives = 55/63 (87%)
Frame = -1
Query: 334 AYVRVRDFKRAFFYHKQMVKSGQVPDARSYQKLRAILDVKAKIKNRKDKSALMGIIKSSM 155
A++RVRDF +AFFYH++MVKSGQV D SYQKLRAILD KA IKNRKD+ +L+G++++ M
Sbjct: 629 AFLRVRDFSQAFFYHQEMVKSGQVIDFNSYQKLRAILDAKAAIKNRKDRRSLIGVVRNKM 688
Query: 154 GLL 146
G++
Sbjct: 689 GVV 691