BLASTX nr result
ID: Rehmannia25_contig00004274
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00004274
(475 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris] 223 3e-56
sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymeras... 223 3e-56
sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras... 222 5e-56
emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum] 222 5e-56
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 221 1e-55
ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 219 2e-55
ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 218 5e-55
emb|CBI27412.3| unnamed protein product [Vitis vinifera] 217 1e-54
dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymer... 217 1e-54
ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 195 6e-48
ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citr... 195 6e-48
ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citr... 195 6e-48
ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citr... 195 6e-48
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 193 2e-47
ref|XP_006844103.1| hypothetical protein AMTR_s00006p00254180 [A... 192 5e-47
gb|EOY03847.1| DNA/RNA polymerases superfamily protein [Theobrom... 191 9e-47
ref|XP_003577161.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 187 1e-45
sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymeras... 187 1e-45
dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymer... 186 2e-45
sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymeras... 186 2e-45
>emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]
Length = 1002
Score = 223 bits (567), Expect = 3e-56
Identities = 114/158 (72%), Positives = 124/158 (78%)
Frame = -1
Query: 475 LMDMC*QKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYIDQLPADMMA 296
LMDMC QKLAPNLPY+KSLFLGWFEPLRDAIAAEQ LC EGKNRGAYAP+ DQLPA+MMA
Sbjct: 192 LMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAEMMA 251
Query: 295 VITMHKLMGLLMTGGCNGSARVVQAACHIGEAIEHEVRIHKFLENCKRKNALNRTCEEGP 116
VITMHKLMGLLMTGG GSARVVQAA HIGEAIEHE RIH+FLE K+ NAL+ E+ P
Sbjct: 252 VITMHKLMGLLMTGGGTGSARVVQAASHIGEAIEHEARIHRFLEKTKKSNALSGDLEDTP 311
Query: 115 DPEAKEQERXXXXXXXXXXXXXLHQVQKIVRQQDDVKP 2
KE+ER L QV+KIV+QQDD KP
Sbjct: 312 GDIMKERERLRKKVKILMKKQKLQQVRKIVKQQDDEKP 349
>sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymerase 1, mitochondrial;
AltName: Full=NsRpoT-A; AltName: Full=T7
bacteriophage-type single subunit RNA polymerase 1;
Flags: Precursor gi|15824083|dbj|BAB69431.1| T7
bacteriophage-type single subunit RNA polymerase
[Nicotiana sylvestris]
Length = 1002
Score = 223 bits (567), Expect = 3e-56
Identities = 114/158 (72%), Positives = 124/158 (78%)
Frame = -1
Query: 475 LMDMC*QKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYIDQLPADMMA 296
LMDMC QKLAPNLPY+KSLFLGWFEPLRDAIAAEQ LC EGKNRGAYAP+ DQLPA+MMA
Sbjct: 192 LMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAEMMA 251
Query: 295 VITMHKLMGLLMTGGCNGSARVVQAACHIGEAIEHEVRIHKFLENCKRKNALNRTCEEGP 116
VITMHKLMGLLMTGG GSARVVQAA HIGEAIEHE RIH+FLE K+ NAL+ E+ P
Sbjct: 252 VITMHKLMGLLMTGGGTGSARVVQAASHIGEAIEHEARIHRFLEKTKKSNALSGDLEDTP 311
Query: 115 DPEAKEQERXXXXXXXXXXXXXLHQVQKIVRQQDDVKP 2
KE+ER L QV+KIV+QQDD KP
Sbjct: 312 GDIMKERERVRKKVKILMKKQKLQQVRKIVKQQDDEKP 349
>sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial;
AltName: Full=NictaRpoT1-tom; AltName: Full=T7
bacteriophage-type single subunit RNA polymerase 1B;
Flags: Precursor
Length = 1002
Score = 222 bits (565), Expect = 5e-56
Identities = 114/158 (72%), Positives = 124/158 (78%)
Frame = -1
Query: 475 LMDMC*QKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYIDQLPADMMA 296
LMDMC QKLAPNLPY+KSLFLGWFEPLRDAIAAEQ LC EGKNRGAYAP+ DQLPA+MMA
Sbjct: 192 LMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAEMMA 251
Query: 295 VITMHKLMGLLMTGGCNGSARVVQAACHIGEAIEHEVRIHKFLENCKRKNALNRTCEEGP 116
VITMHKLMGLLMTGG GSARVVQAA +IGEAIEHE RIH+FLE K+ NAL+ EE P
Sbjct: 252 VITMHKLMGLLMTGGGTGSARVVQAASYIGEAIEHEARIHRFLEKTKKSNALSGDLEETP 311
Query: 115 DPEAKEQERXXXXXXXXXXXXXLHQVQKIVRQQDDVKP 2
KE+ER L QV+KIV+QQDD KP
Sbjct: 312 GDMMKERERLRKKVKILMKKQKLRQVRKIVKQQDDEKP 349
>emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]
Length = 1002
Score = 222 bits (565), Expect = 5e-56
Identities = 114/158 (72%), Positives = 124/158 (78%)
Frame = -1
Query: 475 LMDMC*QKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYIDQLPADMMA 296
LMDMC QKLAPNLPY+KSLFLGWFEPLRDAIAAEQ LC EGKNRGAYAP+ DQLPA+MMA
Sbjct: 192 LMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAEMMA 251
Query: 295 VITMHKLMGLLMTGGCNGSARVVQAACHIGEAIEHEVRIHKFLENCKRKNALNRTCEEGP 116
VITMHKLMGLLMTGG GSARVVQAA +IGEAIEHE RIH+FLE K+ NAL+ EE P
Sbjct: 252 VITMHKLMGLLMTGGGTGSARVVQAASYIGEAIEHEARIHRFLEKTKKSNALSGDLEETP 311
Query: 115 DPEAKEQERXXXXXXXXXXXXXLHQVQKIVRQQDDVKP 2
KE+ER L QV+KIV+QQDD KP
Sbjct: 312 GDMMKERERLRKKVKILMKKQKLRQVRKIVKQQDDEKP 349
>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
vinifera]
Length = 978
Score = 221 bits (562), Expect = 1e-55
Identities = 111/158 (70%), Positives = 124/158 (78%)
Frame = -1
Query: 475 LMDMC*QKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYIDQLPADMMA 296
L DMC QKLAPNLPYIKSLFLGWFEPLRD IAAEQDLCK+GKNR AYAPY D LPADMMA
Sbjct: 166 LSDMCEQKLAPNLPYIKSLFLGWFEPLRDVIAAEQDLCKQGKNRAAYAPYFDHLPADMMA 225
Query: 295 VITMHKLMGLLMTGGCNGSARVVQAACHIGEAIEHEVRIHKFLENCKRKNALNRTCEEGP 116
VITMHKLMGLLMTG NGSARVVQAACHIGEAIEHEVRI +F+E K+K+A + + G
Sbjct: 226 VITMHKLMGLLMTGEGNGSARVVQAACHIGEAIEHEVRIQRFMEKTKKKSASSNNPDGGS 285
Query: 115 DPEAKEQERXXXXXXXXXXXXXLHQVQKIVRQQDDVKP 2
+P KEQE+ L QV++IV++QDD KP
Sbjct: 286 NPVTKEQEKLRKKVSMLMKKQKLQQVRQIVKRQDDSKP 323
>ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like
[Solanum tuberosum]
Length = 993
Score = 219 bits (559), Expect = 2e-55
Identities = 116/158 (73%), Positives = 125/158 (79%)
Frame = -1
Query: 475 LMDMC*QKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYIDQLPADMMA 296
LMDMC QKLAPNLPYIKSLFLGWFEPLRDAIAAEQ LC EGKNRGAYAP+ DQLPA+MMA
Sbjct: 184 LMDMCEQKLAPNLPYIKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAEMMA 243
Query: 295 VITMHKLMGLLMTGGCNGSARVVQAACHIGEAIEHEVRIHKFLENCKRKNALNRTCEEGP 116
VITMHKLMGLLMTGG +GSARVVQAA HIGEAIEHE RIH+FLE K KNAL+ + EE
Sbjct: 244 VITMHKLMGLLMTGGGSGSARVVQAASHIGEAIEHEARIHRFLEKTK-KNALDGSLEETA 302
Query: 115 DPEAKEQERXXXXXXXXXXXXXLHQVQKIVRQQDDVKP 2
KE+ER L QV+KIV+QQDD KP
Sbjct: 303 GDIMKERERLRKKVKILMKKQKLQQVRKIVKQQDDEKP 340
>ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like
[Solanum lycopersicum]
Length = 993
Score = 218 bits (556), Expect = 5e-55
Identities = 115/158 (72%), Positives = 125/158 (79%)
Frame = -1
Query: 475 LMDMC*QKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYIDQLPADMMA 296
LMDMC QKLAPNLPYIKSLFLGWFEPL+DAIAAEQ LC EGKNRGAYAP+ DQLPA+MMA
Sbjct: 184 LMDMCEQKLAPNLPYIKSLFLGWFEPLKDAIAAEQKLCDEGKNRGAYAPFFDQLPAEMMA 243
Query: 295 VITMHKLMGLLMTGGCNGSARVVQAACHIGEAIEHEVRIHKFLENCKRKNALNRTCEEGP 116
VITMHKLMGLLMTGG +GSARVVQAA HIGEAIEHE RIH+FLE K KNAL+ + EE
Sbjct: 244 VITMHKLMGLLMTGGGSGSARVVQAASHIGEAIEHEARIHRFLEKTK-KNALDGSLEETA 302
Query: 115 DPEAKEQERXXXXXXXXXXXXXLHQVQKIVRQQDDVKP 2
KE+ER L QV+KIV+QQDD KP
Sbjct: 303 GDIMKERERLRKKVKILMKKQKLQQVRKIVKQQDDEKP 340
>emb|CBI27412.3| unnamed protein product [Vitis vinifera]
Length = 810
Score = 217 bits (553), Expect = 1e-54
Identities = 109/155 (70%), Positives = 122/155 (78%)
Frame = -1
Query: 466 MC*QKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYIDQLPADMMAVIT 287
MC QKLAPNLPYIKSLFLGWFEPLRD IAAEQDLCK+GKNR AYAPY D LPADMMAVIT
Sbjct: 1 MCEQKLAPNLPYIKSLFLGWFEPLRDVIAAEQDLCKQGKNRAAYAPYFDHLPADMMAVIT 60
Query: 286 MHKLMGLLMTGGCNGSARVVQAACHIGEAIEHEVRIHKFLENCKRKNALNRTCEEGPDPE 107
MHKLMGLLMTG NGSARVVQAACHIGEAIEHEVRI +F+E K+K+A + + G +P
Sbjct: 61 MHKLMGLLMTGEGNGSARVVQAACHIGEAIEHEVRIQRFMEKTKKKSASSNNPDGGSNPV 120
Query: 106 AKEQERXXXXXXXXXXXXXLHQVQKIVRQQDDVKP 2
KEQE+ L QV++IV++QDD KP
Sbjct: 121 TKEQEKLRKKVSMLMKKQKLQQVRQIVKRQDDSKP 155
>dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
sylvestris]
Length = 1002
Score = 217 bits (552), Expect = 1e-54
Identities = 112/158 (70%), Positives = 122/158 (77%)
Frame = -1
Query: 475 LMDMC*QKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYIDQLPADMMA 296
LMDMC QKLAPNLPY+KSLFLGWFEPLRDAIAAEQ LC EGKNRGA AP+ DQLPA+MMA
Sbjct: 192 LMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGACAPFFDQLPAEMMA 251
Query: 295 VITMHKLMGLLMTGGCNGSARVVQAACHIGEAIEHEVRIHKFLENCKRKNALNRTCEEGP 116
VITMHKLMG LMTGG GSARVVQAA HIGEAIEHE RIH+FLE K+ NAL+ E+ P
Sbjct: 252 VITMHKLMGWLMTGGGTGSARVVQAASHIGEAIEHEARIHRFLEKTKKSNALSGDLEDTP 311
Query: 115 DPEAKEQERXXXXXXXXXXXXXLHQVQKIVRQQDDVKP 2
KE+ER L QV+KIV+QQDD KP
Sbjct: 312 GDIMKERERVRKKVKILMKKQKLQQVRKIVKQQDDEKP 349
>ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like [Citrus sinensis]
Length = 1026
Score = 195 bits (495), Expect = 6e-48
Identities = 105/161 (65%), Positives = 119/161 (73%), Gaps = 3/161 (1%)
Frame = -1
Query: 475 LMDMC*QKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYIDQLPADMMA 296
LMDMC QKLAPNLPY+KSLFLGWFEPLRDAIA EQ+ C+ K++ AYAPY DQLPADMMA
Sbjct: 211 LMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCRMAKHKVAYAPYFDQLPADMMA 270
Query: 295 VITMHKLMGLLMTGGCNGSARVVQAACHIGEAIEHEVRIHKFLENCKRKN-ALNRTCEEG 119
VITMHKLMGLLMTGG +G ARVVQAAC IG+AIE EVRIHKFLE K+KN N+ EEG
Sbjct: 271 VITMHKLMGLLMTGGEHGRARVVQAACIIGDAIEQEVRIHKFLEKTKKKNETKNKEDEEG 330
Query: 118 PDPE--AKEQERXXXXXXXXXXXXXLHQVQKIVRQQDDVKP 2
+ EQE+ L V++IV+ QDD KP
Sbjct: 331 DESNTVTTEQEKLRKKVTDLIKKQKLPAVRRIVKGQDDFKP 371
>ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
gi|557533046|gb|ESR44229.1| hypothetical protein
CICLE_v10010966mg [Citrus clementina]
Length = 928
Score = 195 bits (495), Expect = 6e-48
Identities = 105/161 (65%), Positives = 119/161 (73%), Gaps = 3/161 (1%)
Frame = -1
Query: 475 LMDMC*QKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYIDQLPADMMA 296
LMDMC QKLAPNLPY+KSLFLGWFEPLRDAIA EQ+ C+ K++ AYAPY DQLPADMMA
Sbjct: 215 LMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCRMAKHKVAYAPYFDQLPADMMA 274
Query: 295 VITMHKLMGLLMTGGCNGSARVVQAACHIGEAIEHEVRIHKFLENCKRKN-ALNRTCEEG 119
VITMHKLMGLLMTGG +G ARVVQAAC IG+AIE EVRIHKFLE K+KN N+ EEG
Sbjct: 275 VITMHKLMGLLMTGGEHGRARVVQAACIIGDAIEQEVRIHKFLEKTKKKNETKNKEDEEG 334
Query: 118 PDPE--AKEQERXXXXXXXXXXXXXLHQVQKIVRQQDDVKP 2
+ EQE+ L V++IV+ QDD KP
Sbjct: 335 DESNTVTTEQEKLRKKVTDLIKKQKLPAVRRIVKGQDDFKP 375
>ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
gi|557533045|gb|ESR44228.1| hypothetical protein
CICLE_v10010966mg [Citrus clementina]
Length = 1030
Score = 195 bits (495), Expect = 6e-48
Identities = 105/161 (65%), Positives = 119/161 (73%), Gaps = 3/161 (1%)
Frame = -1
Query: 475 LMDMC*QKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYIDQLPADMMA 296
LMDMC QKLAPNLPY+KSLFLGWFEPLRDAIA EQ+ C+ K++ AYAPY DQLPADMMA
Sbjct: 215 LMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCRMAKHKVAYAPYFDQLPADMMA 274
Query: 295 VITMHKLMGLLMTGGCNGSARVVQAACHIGEAIEHEVRIHKFLENCKRKN-ALNRTCEEG 119
VITMHKLMGLLMTGG +G ARVVQAAC IG+AIE EVRIHKFLE K+KN N+ EEG
Sbjct: 275 VITMHKLMGLLMTGGEHGRARVVQAACIIGDAIEQEVRIHKFLEKTKKKNETKNKEDEEG 334
Query: 118 PDPE--AKEQERXXXXXXXXXXXXXLHQVQKIVRQQDDVKP 2
+ EQE+ L V++IV+ QDD KP
Sbjct: 335 DESNTVTTEQEKLRKKVTDLIKKQKLPAVRRIVKGQDDFKP 375
>ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
gi|557533044|gb|ESR44227.1| hypothetical protein
CICLE_v10010966mg [Citrus clementina]
Length = 933
Score = 195 bits (495), Expect = 6e-48
Identities = 105/161 (65%), Positives = 119/161 (73%), Gaps = 3/161 (1%)
Frame = -1
Query: 475 LMDMC*QKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYIDQLPADMMA 296
LMDMC QKLAPNLPY+KSLFLGWFEPLRDAIA EQ+ C+ K++ AYAPY DQLPADMMA
Sbjct: 215 LMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCRMAKHKVAYAPYFDQLPADMMA 274
Query: 295 VITMHKLMGLLMTGGCNGSARVVQAACHIGEAIEHEVRIHKFLENCKRKN-ALNRTCEEG 119
VITMHKLMGLLMTGG +G ARVVQAAC IG+AIE EVRIHKFLE K+KN N+ EEG
Sbjct: 275 VITMHKLMGLLMTGGEHGRARVVQAACIIGDAIEQEVRIHKFLEKTKKKNETKNKEDEEG 334
Query: 118 PDPE--AKEQERXXXXXXXXXXXXXLHQVQKIVRQQDDVKP 2
+ EQE+ L V++IV+ QDD KP
Sbjct: 335 DESNTVTTEQEKLRKKVTDLIKKQKLPAVRRIVKGQDDFKP 375
>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial [Vitis vinifera]
gi|298204431|emb|CBI16911.3| unnamed protein product
[Vitis vinifera]
Length = 1035
Score = 193 bits (491), Expect = 2e-47
Identities = 102/160 (63%), Positives = 115/160 (71%), Gaps = 2/160 (1%)
Frame = -1
Query: 475 LMDMC*QKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYIDQLPADMMA 296
LMDMC QKLAPNLPY+KSLFLGWFEPLRDAI EQ+LC+ GKN+ AYAPY DQLPADMM+
Sbjct: 220 LMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIVKEQELCRLGKNKAAYAPYFDQLPADMMS 279
Query: 295 VITMHKLMGLLMTGGCNGSARVVQAACHIGEAIEHEVRIHKFLENCKRKNALNRTCEEGP 116
VITMHKL+GLLMTGG +GS RVVQAAC IG+AIE EVRIH FLE KRK EG
Sbjct: 280 VITMHKLVGLLMTGGEHGSTRVVQAACVIGDAIEQEVRIHNFLEKTKRKKVGKDKNVEGG 339
Query: 115 --DPEAKEQERXXXXXXXXXXXXXLHQVQKIVRQQDDVKP 2
DP EQE+ LH ++IV+ D+ KP
Sbjct: 340 GFDPVIHEQEKLRKKVTNLMKKQKLHAARQIVKGHDNSKP 379
>ref|XP_006844103.1| hypothetical protein AMTR_s00006p00254180 [Amborella trichopoda]
gi|548846502|gb|ERN05778.1| hypothetical protein
AMTR_s00006p00254180 [Amborella trichopoda]
Length = 1006
Score = 192 bits (487), Expect = 5e-47
Identities = 100/159 (62%), Positives = 116/159 (72%), Gaps = 1/159 (0%)
Frame = -1
Query: 475 LMDMC*QKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYIDQLPADMMA 296
+MDMC KLAPNLPY+KSLFLGWFEPLRD IA+EQ K GKN+GAYAPY QLPADMM+
Sbjct: 193 MMDMCEHKLAPNLPYMKSLFLGWFEPLRDIIASEQASYKAGKNKGAYAPYFMQLPADMMS 252
Query: 295 VITMHKLMGLLMTGGCNGSARVVQAACHIGEAIEHEVRIHKFLENCKRKNALNRTCE-EG 119
VITMHKLMGLLMTG NGS R+VQAAC IGEAIE EV+IH+F E K+K+ + + E
Sbjct: 253 VITMHKLMGLLMTGTDNGSTRLVQAACQIGEAIEQEVKIHRFFEKTKKKSDKEKKLDGEE 312
Query: 118 PDPEAKEQERXXXXXXXXXXXXXLHQVQKIVRQQDDVKP 2
P+ KE+E LHQV+KIV+ QDD KP
Sbjct: 313 PNEGDKEKESLRKRVTNLMKKQKLHQVRKIVKGQDDAKP 351
>gb|EOY03847.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1100
Score = 191 bits (485), Expect = 9e-47
Identities = 103/160 (64%), Positives = 116/160 (72%), Gaps = 2/160 (1%)
Frame = -1
Query: 475 LMDMC*QKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYIDQLPADMMA 296
LMDMC KLAPNLPYIKSLFLGWFEPLRDAI EQ+L + GK R YA Y+DQLPADM A
Sbjct: 218 LMDMCEHKLAPNLPYIKSLFLGWFEPLRDAIIKEQELYRLGKLRAGYAGYLDQLPADMTA 277
Query: 295 VITMHKLMGLLMTGGCNGSARVVQAACHIGEAIEHEVRIHKFLENCKRKNALNRTCEEG- 119
VITMHKLMGLLMTGG +G ARVVQAAC IG+AIE EVRIHKFLE K+K + +EG
Sbjct: 278 VITMHKLMGLLMTGGEHGCARVVQAACLIGDAIEQEVRIHKFLEKTKKKRVDKKNEDEGD 337
Query: 118 -PDPEAKEQERXXXXXXXXXXXXXLHQVQKIVRQQDDVKP 2
P+ E KEQE+ L V++IV+ QDD KP
Sbjct: 338 KPNAEIKEQEKLRKKVTDLIKKQKLPAVRQIVKGQDDTKP 377
>ref|XP_003577161.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like [Brachypodium
distachyon]
Length = 992
Score = 187 bits (476), Expect = 1e-45
Identities = 97/160 (60%), Positives = 113/160 (70%), Gaps = 2/160 (1%)
Frame = -1
Query: 475 LMDMC*QKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYIDQLPADMMA 296
L DMC KLAPNLPY+KSLFLGWFEPLRD I AEQ+L E R ++APY + LPADMMA
Sbjct: 178 LADMCEHKLAPNLPYVKSLFLGWFEPLRDQIIAEQELVGERGARASHAPYFNMLPADMMA 237
Query: 295 VITMHKLMGLLMTGGCNGSARVVQAACHIGEAIEHEVRIHKFLENCKRKNA--LNRTCEE 122
VITMHKLMGLLMTG +GS RV+QAAC IGEAIEHEVRIHKFLE K+KN ++ E
Sbjct: 238 VITMHKLMGLLMTGSGDGSVRVIQAACQIGEAIEHEVRIHKFLEKTKKKNTKEVDNVVEA 297
Query: 121 GPDPEAKEQERXXXXXXXXXXXXXLHQVQKIVRQQDDVKP 2
G AKEQ+R + QV+ IV++QD +P
Sbjct: 298 GDSDIAKEQQRLRKKVTDLMKKQKIRQVRNIVKKQDSTRP 337
>sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial; AltName:
Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
single subunit RNA polymerase 2B; Flags: Precursor
gi|21425665|emb|CAC95020.1| mitochondrial and
chloroplast RNA polymerase [Nicotiana tabacum]
Length = 1021
Score = 187 bits (475), Expect = 1e-45
Identities = 98/158 (62%), Positives = 115/158 (72%)
Frame = -1
Query: 475 LMDMC*QKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYIDQLPADMMA 296
L DMC QKLAPNLPY+KSLFLGWFEPLRD IA EQ+LC +GK++ AYA Y+ QLPADMMA
Sbjct: 209 LFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYLYQLPADMMA 268
Query: 295 VITMHKLMGLLMTGGCNGSARVVQAACHIGEAIEHEVRIHKFLENCKRKNALNRTCEEGP 116
VITMHKLMGLLMTGG +G+ARVVQAA IG+AIE EVRIH FLE K++ A +E
Sbjct: 269 VITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKAEKDKQKEDG 328
Query: 115 DPEAKEQERXXXXXXXXXXXXXLHQVQKIVRQQDDVKP 2
+ +EQE+ L V +IVR+QDD KP
Sbjct: 329 EHVTQEQEKLRKKVTNLMKKQKLRAVGQIVRRQDDSKP 366
>dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
sylvestris] gi|17221595|dbj|BAB78465.1| T7
bacteriophage-type single subunit RNA polymerase
[Nicotiana sylvestris]
Length = 1020
Score = 186 bits (473), Expect = 2e-45
Identities = 98/158 (62%), Positives = 114/158 (72%)
Frame = -1
Query: 475 LMDMC*QKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYIDQLPADMMA 296
L DMC QKLAPNLPY+KSLFLGWFEPLRD IA EQ+LC +GK++ AYA Y QLPADMMA
Sbjct: 208 LFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYFYQLPADMMA 267
Query: 295 VITMHKLMGLLMTGGCNGSARVVQAACHIGEAIEHEVRIHKFLENCKRKNALNRTCEEGP 116
VITMHKLMGLLMTGG +G+ARVVQAA IG+AIE EVRIH FLE K++ A +E
Sbjct: 268 VITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKAEKDKQKEDG 327
Query: 115 DPEAKEQERXXXXXXXXXXXXXLHQVQKIVRQQDDVKP 2
+ +EQE+ L V +IVR+QDD KP
Sbjct: 328 EHVTQEQEKLRKKVTNLMKKQKLRAVGQIVRRQDDSKP 365
>sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial; AltName: Full=NsRpoT-B;
AltName: Full=T7 bacteriophage-type single subunit RNA
polymerase 2; Flags: Precursor
gi|21425639|emb|CAC82575.2| phage-type RNA polymerase
[Nicotiana sylvestris]
Length = 1020
Score = 186 bits (473), Expect = 2e-45
Identities = 98/158 (62%), Positives = 114/158 (72%)
Frame = -1
Query: 475 LMDMC*QKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYIDQLPADMMA 296
L DMC QKLAPNLPY+KSLFLGWFEPLRD IA EQ+LC +GK++ AYA Y QLPADMMA
Sbjct: 208 LFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYFYQLPADMMA 267
Query: 295 VITMHKLMGLLMTGGCNGSARVVQAACHIGEAIEHEVRIHKFLENCKRKNALNRTCEEGP 116
VITMHKLMGLLMTGG +G+ARVVQAA IG+AIE EVRIH FLE K++ A +E
Sbjct: 268 VITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKAEKDKQKEDG 327
Query: 115 DPEAKEQERXXXXXXXXXXXXXLHQVQKIVRQQDDVKP 2
+ +EQE+ L V +IVR+QDD KP
Sbjct: 328 EHVTQEQEKLRKKVTNLMKKQKLRAVGQIVRRQDDSKP 365