BLASTX nr result
ID: Rehmannia25_contig00004161
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rehmannia25_contig00004161 (1405 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAS82859.1| geranyl diphosphate synthase small subunit [Antir... 280 1e-72 pdb|3QKC|B Chain B, Crystal Structure Of Geranyl Diphosphate Syn... 266 2e-68 gb|AGH33891.1| geranyl diphsophate synthase small subunit [Lavan... 264 8e-68 gb|AGL91646.1| geranyl diphosphate synthase [Catharanthus roseus] 250 9e-64 gb|ABR15421.1| geranyl pyrophosphate synthase small subunit [Men... 250 9e-64 gb|AAF08792.1|AF182827_1 geranyl diphosphate synthase small subu... 250 1e-63 gb|ABW86880.1| geranyl pyrophosphate synthase small subunit [Men... 249 2e-63 gb|AEZ55678.1| geranyl diphosphate synthase small subunit type I... 248 3e-63 pdb|3KRA|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate ... 238 3e-60 ref|XP_004244349.1| PREDICTED: heterodimeric geranylgeranyl pyro... 231 7e-58 pdb|3OAB|B Chain B, Mint Deletion Mutant Of Heterotetrameric Ger... 225 4e-56 gb|EOY12321.1| Geranyl-diphosphate synthase, putative [Theobroma... 218 6e-54 ref|XP_002532570.1| geranyl geranyl pyrophosphate synthase, puta... 215 3e-53 ref|XP_002322072.2| hypothetical protein POPTR_0015s04050g [Popu... 213 1e-52 gb|EPS64735.1| geranyl diphosphate synthase small subunit, parti... 212 3e-52 dbj|BAF98300.1| geranyl-diphosphate synthase [Hevea brasiliensis] 212 3e-52 ref|XP_004491403.1| PREDICTED: heterodimeric geranylgeranyl pyro... 203 2e-49 gb|EXB38724.1| Heterodimeric geranylgeranyl pyrophosphate syntha... 201 5e-49 ref|XP_006452381.1| hypothetical protein CICLE_v10008936mg [Citr... 196 2e-47 ref|XP_002278023.1| PREDICTED: geranylgeranyl pyrophosphate synt... 195 3e-47 >gb|AAS82859.1| geranyl diphosphate synthase small subunit [Antirrhinum majus] Length = 297 Score = 280 bits (715), Expect = 1e-72 Identities = 155/294 (52%), Positives = 189/294 (64%), Gaps = 3/294 (1%) Frame = -1 Query: 1207 MATGISHSHLNAKTNLFP---KSSTNLSRFTPRAMAAAQNQSYWVSIEADVETYLKKAIP 1037 MA G++H N K+ LFP KS T P +A + Q+Y +IE+D+E+YLKKAIP Sbjct: 1 MAHGLTH--FNTKSGLFPSITKSKTTRPSTRPVILAMTRTQTYRATIESDIESYLKKAIP 58 Query: 1036 IRSPESVFEPMHHLTFAAPRTTAPALCVAACELVGGDXXXXXXXXXXXXXXXXXAYIHEH 857 IR+PESVFEPMHHLTFAAPRT+A ALCVAACELVGGD AY HE+ Sbjct: 59 IRAPESVFEPMHHLTFAAPRTSASALCVAACELVGGDRSDAMAAAAAVHLMHVAAYTHEN 118 Query: 856 LPLTDRPRPKPTVHHKYNPNIELLTGDGIIPFGLELLARSMDLAQNNQDKILRVIIEITR 677 LPLTD P K + HK++PNIELLTGDGIIPFGLEL+ARSMD +NN D+ILR IIE+TR Sbjct: 119 LPLTDGPMSKSEIQHKFDPNIELLTGDGIIPFGLELMARSMDPTRNNPDRILRAIIELTR 178 Query: 676 ATGSQGVVDGQYQELGIDEIGSTDYEIVEYVSKKKEGELHXXXXXXXXXXXXXXXXXXEK 497 GS+G+V+GQY ELG++++ D E++EYV KKKEG LH EK Sbjct: 179 VMGSEGIVEGQYHELGLNQL--NDLELIEYVCKKKEGTLHACGAACGAILGGCDEDKIEK 236 Query: 496 LRNFGLYAGMLRGLLGKNNSGIMXXXXXXXXXXXXXXXESFQGKRTELIASLVE 335 LR FGLY G ++GLLGKN SG ESF G++ ELI + E Sbjct: 237 LRRFGLYVGTVQGLLGKNRSG-FEGRIKELKELAVKELESFGGEKIELIRGVFE 289 >pdb|3QKC|B Chain B, Crystal Structure Of Geranyl Diphosphate Synthase Small Subunit From Antirrhinum Majus gi|323463188|pdb|3QKC|A Chain A, Crystal Structure Of Geranyl Diphosphate Synthase Small Subunit From Antirrhinum Majus Length = 273 Score = 266 bits (680), Expect = 2e-68 Identities = 145/275 (52%), Positives = 180/275 (65%), Gaps = 2/275 (0%) Frame = -1 Query: 1114 MAAAQNQSYWVSIEADVETYLKKAIPIRSPESVFEPMHHLTFAAPRTTAPALCVAACELV 935 M+ + Q+Y +IE+D+E+YLKKAIPIR+PESVFEPMHHLTFAAPRT+A ALCVAACELV Sbjct: 1 MSLTRTQTYRATIESDIESYLKKAIPIRAPESVFEPMHHLTFAAPRTSASALCVAACELV 60 Query: 934 GGDXXXXXXXXXXXXXXXXXAYIHEHLPLTDRPRPKPTVHHKYNPNIELLTGDGIIPFGL 755 GGD AY HE+LPLTD P K + HK++PNIELLTGDGIIPFGL Sbjct: 61 GGDRSDAMAAAAAVHLMHVAAYTHENLPLTDGPMSKSEIQHKFDPNIELLTGDGIIPFGL 120 Query: 754 ELLARSMDLAQNNQDKILRVIIEITRATGSQGVVDGQYQELGIDEIGSTDYEIVEYVSKK 575 EL+ARSMD +NN D+ILR IIE+TR GS+G+V+GQY ELG++++ D E++EYV KK Sbjct: 121 ELMARSMDPTRNNPDRILRAIIELTRVMGSEGIVEGQYHELGLNQL--NDLELIEYVCKK 178 Query: 574 KEGELHXXXXXXXXXXXXXXXXXXEKLRNFGLYAGMLRGLLGKNNSGIMXXXXXXXXXXX 395 KEG LH EKLR FGLY G ++GLLGKN SG Sbjct: 179 KEGTLHACGAACGAILGGCDEDKIEKLRRFGLYVGTVQGLLGKNRSG-FEGRIKELKELA 237 Query: 394 XXXXESFQGKRTELIASL--VEPSLPAAQK*NHEY 296 ESF G++ ELI + +E SL + +H + Sbjct: 238 VKELESFGGEKIELIRGVFELEHSLAGVEGHHHHH 272 >gb|AGH33891.1| geranyl diphsophate synthase small subunit [Lavandula x intermedia] Length = 295 Score = 264 bits (674), Expect = 8e-68 Identities = 157/296 (53%), Positives = 186/296 (62%), Gaps = 9/296 (3%) Frame = -1 Query: 1186 SHLNAKTNLFPKSSTNLSRFTPRAMAAAQNQSYWVSIEADVETYLKKAIPIRSPESVFEP 1007 SHL KT F +S+ + ++AAQN SYW SI+AD+ TYLKKAIPIRSPE+VFEP Sbjct: 6 SHLPIKTRSFFCNSS------AQPVSAAQNASYWSSIDADINTYLKKAIPIRSPETVFEP 59 Query: 1006 MHHLTFAAPRTTAPALCVAACELVGGDXXXXXXXXXXXXXXXXXAYIHEHLPLTDRPRP- 830 MHHLTFAAP TTA ALCVAACEL GG+ AY H+HLPLTDRPRP Sbjct: 60 MHHLTFAAPTTTASALCVAACELFGGNRTQALPAASAIHLIHAAAYTHDHLPLTDRPRPE 119 Query: 829 -KPTVHHKYNPNIELLTGDGIIPFGLELLARSMDLAQNNQDKILRVIIEITRATGSQGVV 653 KP + HK+NPNIELLTGDGI PFG ELLA S+D + D+ILRV+IEI+RA+GSQG+V Sbjct: 120 SKPDIQHKFNPNIELLTGDGIAPFGFELLANSVD--TTHPDRILRVVIEISRASGSQGLV 177 Query: 652 DGQYQELGIDEIGSTDYEIVEYVSKKKEGELHXXXXXXXXXXXXXXXXXXEKLRNFGLYA 473 DG Y+E I + S +E +EYVSKKK GE+H +KLRNFGLYA Sbjct: 178 DGLYREKQIVDQRSR-FEFIEYVSKKKYGEMHACGAASGVILAGGDEEQIQKLRNFGLYA 236 Query: 472 GMLRGL------LGKNNSGIMXXXXXXXXXXXXXXXESFQGKRTELIASLV-EPSL 326 G +RG+ L K N + E FQGK ELI+SLV EP L Sbjct: 237 GTVRGMIEMKSGLEKKNIAQIEKIIIKFQQLAMKEMEGFQGKNAELISSLVTEPIL 292 >gb|AGL91646.1| geranyl diphosphate synthase [Catharanthus roseus] Length = 299 Score = 250 bits (639), Expect = 9e-64 Identities = 141/300 (47%), Positives = 184/300 (61%), Gaps = 6/300 (2%) Frame = -1 Query: 1207 MATGISHSHLNAKTNLFPKSSTNLSRFTPRAM---AAAQNQSYWVSIEADVETYLKKAIP 1037 MA IS +T S ++LS TP + W +IE+D++T+LKK+IP Sbjct: 1 MAKAISSFINGGRTTFLSISRSDLSPTTPPHRPNSVICMKSNSWANIESDIQTHLKKSIP 60 Query: 1036 IRSPESVFEPMHHLTFAAPRTTAPALCVAACELVGGDXXXXXXXXXXXXXXXXXAYIHEH 857 IR+PE VFEPMH+LTFAAPRTTAPALC+AACE+VGGD AY HE+ Sbjct: 61 IRAPEDVFEPMHYLTFAAPRTTAPALCIAACEVVGGDGDQAMAAAAAIHLVHAAAYAHEN 120 Query: 856 LPLTDRPRPKPTVHHKYNPNIELLTGDGIIPFGLELLARSMDLAQNNQDKILRVIIEITR 677 LPLTDR RPKP + HK+N NIELLTGDGI+P+G ELLA+SMD NN D+ILRVIIEIT+ Sbjct: 121 LPLTDRRRPKPPIQHKFNSNIELLTGDGIVPYGFELLAKSMD--SNNSDRILRVIIEITQ 178 Query: 676 ATGSQGVVDGQYQELGIDEIGSTDYEIVEYVSKKKEGELHXXXXXXXXXXXXXXXXXXEK 497 A GS+G++DGQ++EL + + + ++EYV KKKEGEL+ K Sbjct: 179 AAGSKGIIDGQFRELDVID-SEINMGLIEYVCKKKEGELNACGAACGAILGGGSEEEIGK 237 Query: 496 LRNFGLYAGMLRGL---LGKNNSGIMXXXXXXXXXXXXXXXESFQGKRTELIASLVEPSL 326 LR FGLYAGM++GL +GKN I +S + ++ + I+SL+E L Sbjct: 238 LRKFGLYAGMIQGLVHGVGKNREEIQ-ELVRKLRYLAMEELKSLKNRKIDTISSLLETDL 296 >gb|ABR15421.1| geranyl pyrophosphate synthase small subunit [Mentha canadensis] Length = 313 Score = 250 bits (639), Expect = 9e-64 Identities = 149/312 (47%), Positives = 188/312 (60%), Gaps = 19/312 (6%) Frame = -1 Query: 1195 ISHSHLNAKTNLFPKSSTNLSRFT-------------PRAMAAAQNQSYWVSIEADVETY 1055 I+ SH+N+KT K+ ++LSR + P AAQ+Q YW +IEAD++ Y Sbjct: 3 INLSHINSKTCFPLKTRSDLSRSSSARCMPTAAAAAFPTIATAAQSQPYWAAIEADIDRY 62 Query: 1054 LKKAIPIRSPESVFEPMHHLTFAAPRTTAPALCVAACELVGGDXXXXXXXXXXXXXXXXX 875 LKK+I IR PE+VF PMHHLTFAAP T A ALC+AACELVGGD Sbjct: 63 LKKSITIRPPETVFGPMHHLTFAAPATAASALCLAACELVGGDRSQAMAAAAAIHLVHAA 122 Query: 874 AYIHEHLPLTDRPRP--KPTVHHKYNPNIELLTGDGIIPFGLELLARSMDLAQ-NNQDKI 704 AY+HEHLPLTD RP KP + HKY PN+ELLTGDGI+PFG ELLA S+D A+ ++ D+I Sbjct: 123 AYVHEHLPLTDGSRPVSKPAIQHKYGPNVELLTGDGIVPFGFELLAGSVDPARTDDPDRI 182 Query: 703 LRVIIEITRATGSQGVVDGQYQELGIDEIGSTDYEIVEYVSKKKEGELHXXXXXXXXXXX 524 LRVIIEI+RA G +G++ G ++E I + G+T + +EYV KKK GE+H Sbjct: 183 LRVIIEISRAGGPEGMISGLHREEEIVD-GNTSLDFIEYVCKKKYGEMHACGAACGAILG 241 Query: 523 XXXXXXXEKLRNFGLYAGMLRGLLGKNNSG--IMXXXXXXXXXXXXXXXESFQGKRTELI 350 +KLRNFGLY G LRG++ NS I F GK EL+ Sbjct: 242 GAAEEEIQKLRNFGLYQGTLRGMMEMKNSHQLIDENIIGKLKELALEELGGFHGKNAELM 301 Query: 349 ASLV-EPSLPAA 317 +SLV EPSL AA Sbjct: 302 SSLVAEPSLYAA 313 >gb|AAF08792.1|AF182827_1 geranyl diphosphate synthase small subunit [Mentha x piperita] gi|10637873|emb|CAC10560.1| gpp synthase small subunit [Mentha x piperita] Length = 313 Score = 250 bits (638), Expect = 1e-63 Identities = 149/312 (47%), Positives = 187/312 (59%), Gaps = 19/312 (6%) Frame = -1 Query: 1195 ISHSHLNAKTNLFPKSSTNLSRFT-------------PRAMAAAQNQSYWVSIEADVETY 1055 I+ SH+N+KT K+ ++LSR + P AAQ+Q YW +IEAD+E Y Sbjct: 3 INLSHINSKTCFPLKTRSDLSRSSSARCMPTAAAAAFPTIATAAQSQPYWAAIEADIERY 62 Query: 1054 LKKAIPIRSPESVFEPMHHLTFAAPRTTAPALCVAACELVGGDXXXXXXXXXXXXXXXXX 875 LKK+I IR PE+VF PMHHLTFAAP T A LC+AACELVGGD Sbjct: 63 LKKSITIRPPETVFGPMHHLTFAAPATAASTLCLAACELVGGDRSQAMAAAAAIHLVHAA 122 Query: 874 AYIHEHLPLTDRPRP--KPTVHHKYNPNIELLTGDGIIPFGLELLARSMDLAQ-NNQDKI 704 AY+HEHLPLTD RP KP + HKY PN+ELLTGDGI+PFG ELLA S+D A+ ++ D+I Sbjct: 123 AYVHEHLPLTDGSRPVSKPAIQHKYGPNVELLTGDGIVPFGFELLAGSVDPARTDDPDRI 182 Query: 703 LRVIIEITRATGSQGVVDGQYQELGIDEIGSTDYEIVEYVSKKKEGELHXXXXXXXXXXX 524 LRVIIEI+RA G +G++ G ++E I + G+T + +EYV KKK GE+H Sbjct: 183 LRVIIEISRAGGPEGMISGLHREEEIVD-GNTSLDFIEYVCKKKYGEMHACGAACGAILG 241 Query: 523 XXXXXXXEKLRNFGLYAGMLRGLLGKNNSG--IMXXXXXXXXXXXXXXXESFQGKRTELI 350 +KLRNFGLY G LRG++ NS I F GK EL+ Sbjct: 242 GAAEEEIQKLRNFGLYQGTLRGMMEMKNSHQLIDENIIGKLKELALEELGGFHGKNAELM 301 Query: 349 ASLV-EPSLPAA 317 +SLV EPSL AA Sbjct: 302 SSLVAEPSLYAA 313 >gb|ABW86880.1| geranyl pyrophosphate synthase small subunit [Mentha x piperita] Length = 313 Score = 249 bits (637), Expect = 2e-63 Identities = 149/312 (47%), Positives = 188/312 (60%), Gaps = 19/312 (6%) Frame = -1 Query: 1195 ISHSHLNAKTNLFPKSSTNLSRFT-------------PRAMAAAQNQSYWVSIEADVETY 1055 I+ SH+N+KT K+ ++LSR + P AAQ+Q YW +IEAD++ Y Sbjct: 3 INLSHINSKTCFPLKTRSDLSRSSSGRCMPTAAAAAFPIIATAAQSQPYWAAIEADIDRY 62 Query: 1054 LKKAIPIRSPESVFEPMHHLTFAAPRTTAPALCVAACELVGGDXXXXXXXXXXXXXXXXX 875 LKK+I IR PE+VF PMHHLTFAAP T A ALC+AACELVGGD Sbjct: 63 LKKSITIRPPETVFGPMHHLTFAAPATAASALCLAACELVGGDRSQAMAAAAAIHLVHAA 122 Query: 874 AYIHEHLPLTDRPRP--KPTVHHKYNPNIELLTGDGIIPFGLELLARSMDLAQ-NNQDKI 704 AY+HEHLPLTD RP KP + HKY PN+ELLTGDGI+PFG ELLA S+D A+ ++ D+I Sbjct: 123 AYVHEHLPLTDGSRPVSKPAIQHKYGPNVELLTGDGIVPFGFELLAGSVDPARTDDPDRI 182 Query: 703 LRVIIEITRATGSQGVVDGQYQELGIDEIGSTDYEIVEYVSKKKEGELHXXXXXXXXXXX 524 LRVIIEI+RA G +G++ G ++E I + G+T + +EYV KKK GE+H Sbjct: 183 LRVIIEISRAGGPEGMISGLHREEEIVD-GNTSLDFIEYVCKKKYGEMHACGAACGAILG 241 Query: 523 XXXXXXXEKLRNFGLYAGMLRGLLGKNNSG--IMXXXXXXXXXXXXXXXESFQGKRTELI 350 +KLRNFGLY G LRG++ NS I F GK EL+ Sbjct: 242 GAAEEEIQKLRNFGLYQGTLRGMMEMTNSHQLIDENIIGKLKELALEELGGFHGKNAELM 301 Query: 349 ASLV-EPSLPAA 317 +SLV EPSL AA Sbjct: 302 SSLVAEPSLYAA 313 >gb|AEZ55678.1| geranyl diphosphate synthase small subunit type I [Salvia miltiorrhiza] Length = 314 Score = 248 bits (634), Expect = 3e-63 Identities = 142/286 (49%), Positives = 179/286 (62%), Gaps = 4/286 (1%) Frame = -1 Query: 1183 HLNAKTNLFPKSSTNLSRFTPRAMAA-AQNQSYWVSIEADVETYLKKAIPIRSPESVFEP 1007 ++N K++ K+ +NLSR + A AQN SYW +IEAD++TYLKK+I IRSPE+VFEP Sbjct: 18 YVNTKSSFPFKTRSNLSRSSRACTAVVAQNHSYWAAIEADIDTYLKKSIAIRSPETVFEP 77 Query: 1006 MHHLTFAAPRTTAPALCVAACELVGGDXXXXXXXXXXXXXXXXXAYIHEHLPLTDRPRP- 830 MHHLTFAAPRT A A+CVAACELVGG+ AY HEHLPLTDRPRP Sbjct: 78 MHHLTFAAPRTAASAICVAACELVGGERSQAIATASAIHIMHAAAYAHEHLPLTDRPRPN 137 Query: 829 -KPTVHHKYNPNIELLTGDGIIPFGLELLARSMDLAQNNQDKILRVIIEITRATGSQGVV 653 KP + HKY PNIELLTGDG+ FG ELLA S+ N ++ILRVIIEI+RA+GS+G++ Sbjct: 138 SKPAIQHKYGPNIELLTGDGMASFGFELLAGSIRSDHPNPERILRVIIEISRASGSEGII 197 Query: 652 DGQYQELGIDEIGSTDYEIVEYVSKKKEGELHXXXXXXXXXXXXXXXXXXEKLRNFGLYA 473 DG Y+E I + S ++ +EY+ +KK GE+H +KLRNFG YA Sbjct: 198 DGFYREKEIVDQHSR-FDFIEYLCRKKYGEMHACAAASGAILAGGAEEEIQKLRNFGHYA 256 Query: 472 GMLRGLLGKN-NSGIMXXXXXXXXXXXXXXXESFQGKRTELIASLV 338 G L GLL K ++ + E F GK EL+ SLV Sbjct: 257 GTLIGLLHKKIDTPQIQNVIGKLKDLALKELEGFHGKNVELLCSLV 302 >pdb|3KRA|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium gi|289526779|pdb|3KRA|C Chain C, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium gi|289526782|pdb|3KRC|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Ipp gi|289526783|pdb|3KRC|C Chain C, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Ipp gi|289526786|pdb|3KRF|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium, Ipp, And Dmaspp (i) gi|289526787|pdb|3KRF|C Chain C, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium, Ipp, And Dmaspp (i) gi|289526790|pdb|3KRO|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium, Ipp, And Dmaspp (ii) gi|289526791|pdb|3KRO|C Chain C, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium, Ipp, And Dmaspp (ii) gi|289526794|pdb|3KRP|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium And Gpp gi|289526795|pdb|3KRP|C Chain C, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium And Gpp Length = 274 Score = 238 bits (608), Expect = 3e-60 Identities = 136/273 (49%), Positives = 168/273 (61%), Gaps = 6/273 (2%) Frame = -1 Query: 1096 QSYWVSIEADVETYLKKAIPIRSPESVFEPMHHLTFAAPRTTAPALCVAACELVGGDXXX 917 Q YW +IEAD+E YLKK+I IR PE+VF PMHHLTFAAP T A LC+AACELVGGD Sbjct: 2 QPYWAAIEADIERYLKKSITIRPPETVFGPMHHLTFAAPATAASTLCLAACELVGGDRSQ 61 Query: 916 XXXXXXXXXXXXXXAYIHEHLPLTDRPRP--KPTVHHKYNPNIELLTGDGIIPFGLELLA 743 AY+HEHLPLTD RP KP + HKY PN+ELLTGDGI+PFG ELLA Sbjct: 62 AMAAAAAIHLVHAAAYVHEHLPLTDGSRPVSKPAIQHKYGPNVELLTGDGIVPFGFELLA 121 Query: 742 RSMDLAQ-NNQDKILRVIIEITRATGSQGVVDGQYQELGIDEIGSTDYEIVEYVSKKKEG 566 S+D A+ ++ D+ILRVIIEI+RA G +G++ G ++E I + G+T + +EYV KKK G Sbjct: 122 GSVDPARTDDPDRILRVIIEISRAGGPEGMISGLHREEEIVD-GNTSLDFIEYVCKKKYG 180 Query: 565 ELHXXXXXXXXXXXXXXXXXXEKLRNFGLYAGMLRGLLGKNNSG--IMXXXXXXXXXXXX 392 E+H +KLRNFGLY G LRG++ NS I Sbjct: 181 EMHACGAACGAILGGAAEEEIQKLRNFGLYQGTLRGMMEMKNSHQLIDENIIGKLKELAL 240 Query: 391 XXXESFQGKRTELIASLV-EPSLPAAQK*NHEY 296 F GK EL++SLV EPSL AA +H + Sbjct: 241 EELGGFHGKNAELMSSLVAEPSLYAAHHHHHHH 273 >ref|XP_004244349.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Solanum lycopersicum] Length = 269 Score = 231 bits (588), Expect = 7e-58 Identities = 128/268 (47%), Positives = 166/268 (61%), Gaps = 10/268 (3%) Frame = -1 Query: 1102 QNQSYWVSIEADVETYLKKAIPIRSPESVFEPMHHLTFAAPRTTAPALCVAACELVGGDX 923 QNQSYW SIE+D+E +LKKAI IR+PESVFEPMH+LTF P++TAPALCVAACELVGGD Sbjct: 3 QNQSYWASIESDIEAHLKKAISIRAPESVFEPMHYLTFTTPKSTAPALCVAACELVGGDR 62 Query: 922 XXXXXXXXXXXXXXXXAYIHEHLPLTDRPRPKPTVHHK-------YNPNIELLTGDGIIP 764 Y H+H+ + R P P + HK + PNIELLTGDGI+P Sbjct: 63 DRAMAAASAIHLMHVATYTHQHMTMA-RTEPGPVIEHKDIEPEHKFGPNIELLTGDGIMP 121 Query: 763 FGLELLARSMDLAQNNQDKILRVIIEITRATGSQGVVDGQYQELGIDEIGSTDYEIVEYV 584 F +EL+ ++M A+ N DKI+ VIIE+TRA GSQG ++GQY+EL + G+ D E EYV Sbjct: 122 FAIELIVKAMSPARKNSDKIVSVIIEVTRAFGSQGQLEGQYRELEWAQSGNEDEETFEYV 181 Query: 583 SKKKEGELHXXXXXXXXXXXXXXXXXXEKLRNFGLYAGMLRGLL-GKN-NSGIMXXXXXX 410 KKKEGE+H E+LRN+GLY G+++G++ G+N N + Sbjct: 182 CKKKEGEIHACGATCGAILGDGNDEEIERLRNYGLYVGIIQGIINGRNYNKKMEKRVNEL 241 Query: 409 XXXXXXXXXESFQGKR-TELIASLVEPS 329 SF+GK+ + IASLVE S Sbjct: 242 RILAMKELNTSFKGKKLMKQIASLVEES 269 >pdb|3OAB|B Chain B, Mint Deletion Mutant Of Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Ligands gi|310942865|pdb|3OAB|C Chain C, Mint Deletion Mutant Of Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Ligands gi|310942868|pdb|3OAC|B Chain B, Mint Deletion Mutant Of Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Ligands gi|310942869|pdb|3OAC|C Chain C, Mint Deletion Mutant Of Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Ligands Length = 264 Score = 225 bits (573), Expect = 4e-56 Identities = 130/271 (47%), Positives = 162/271 (59%), Gaps = 4/271 (1%) Frame = -1 Query: 1096 QSYWVSIEADVETYLKKAIPIRSPESVFEPMHHLTFAAPRTTAPALCVAACELVGGDXXX 917 Q YW +IEAD+E YLKK+I IR PE+VF PMHHLTFAAP T A LC+AACELVGGD Sbjct: 2 QPYWAAIEADIERYLKKSITIRPPETVFGPMHHLTFAAPATAASTLCLAACELVGGDRSQ 61 Query: 916 XXXXXXXXXXXXXXAYIHEHLPLTDRPRPKPTVHHKYNPNIELLTGDGIIPFGLELLARS 737 AY+HEHLP P + HKY PN+ELLTGDGI+PFG ELLA S Sbjct: 62 AMAAAAAIHLVHAAAYVHEHLP--------PAIQHKYGPNVELLTGDGIVPFGFELLAGS 113 Query: 736 MDLAQ-NNQDKILRVIIEITRATGSQGVVDGQYQELGIDEIGSTDYEIVEYVSKKKEGEL 560 +D A+ ++ D+ILRVIIEI+RA G +G++ G ++E I + G+T + +EYV KKK GE+ Sbjct: 114 VDPARTDDPDRILRVIIEISRAGGPEGMISGLHREEEIVD-GNTSLDFIEYVCKKKYGEM 172 Query: 559 HXXXXXXXXXXXXXXXXXXEKLRNFGLYAGMLRGLLGKNNSG--IMXXXXXXXXXXXXXX 386 H +KLRNFGLY G LRG++ NS I Sbjct: 173 HACGAACGAILGGAAEEEIQKLRNFGLYQGTLRGMMEMKNSHQLIDENIIGKLKELALEE 232 Query: 385 XESFQGKRTELIASLV-EPSLPAAQK*NHEY 296 F GK EL++SLV EPSL AA +H + Sbjct: 233 LGGFHGKNAELMSSLVAEPSLYAAHHHHHHH 263 >gb|EOY12321.1| Geranyl-diphosphate synthase, putative [Theobroma cacao] Length = 300 Score = 218 bits (554), Expect = 6e-54 Identities = 115/253 (45%), Positives = 151/253 (59%), Gaps = 3/253 (1%) Frame = -1 Query: 1186 SHLNAKTNLFPKSSTNLSRFTPRAMAAAQNQSYWVSIEADVETYLKKAIPIRSPESVFEP 1007 SH+N L N + P + + NQSYW SI AD+E +LK+AIP+R P SV +P Sbjct: 6 SHINGNPLLQVPCRPNPMPYKPMMVTMSCNQSYWASINADIEAHLKQAIPVREPLSVSQP 65 Query: 1006 MHHLTFAAPRTTAPALCVAACELVGGDXXXXXXXXXXXXXXXXXAYIHEHLPLTDRPRPK 827 MHHLTFA P+ TAPALCVAACELVGG ++ HE LPLT RP+ Sbjct: 66 MHHLTFACPKNTAPALCVAACELVGGHRDQALPAASALHLMYAASFTHEQLPLTQSSRPR 125 Query: 826 PTVHHKYNPNIELLTGDGIIPFGLELLARSMDLAQNNQDKILRVIIEITRATGSQGVVDG 647 T+ H Y PNIELL GD +IP GLELLARS D A + +++LRV++EITRATGSQG++ G Sbjct: 126 STIQHAYGPNIELLIGDAMIPSGLELLARSDDPAHTDSERVLRVMVEITRATGSQGMIHG 185 Query: 646 QYQELGIDEIGSTDYEI---VEYVSKKKEGELHXXXXXXXXXXXXXXXXXXEKLRNFGLY 476 QY E+ + G+ + +E +S+K EG LH EK+R +GLY Sbjct: 186 QYYEVERCQSGNKEASYMVEIERISEKYEGALHACAAACGAIVGGGSEEEIEKMRRYGLY 245 Query: 475 AGMLRGLLGKNNS 437 G ++G+L + S Sbjct: 246 IGKIQGMLNRIRS 258 >ref|XP_002532570.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis] gi|223527725|gb|EEF29831.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis] Length = 308 Score = 215 bits (548), Expect = 3e-53 Identities = 117/237 (49%), Positives = 149/237 (62%), Gaps = 9/237 (3%) Frame = -1 Query: 1129 FTPRAMAAAQNQS----YWVSIEADVETYLKKAIPIRSPESVFEPMHHLTFAAPRTTAPA 962 F+ R +A + S YW I AD+ET+LK+AIP+R P VFEPMHHLTFAAPR+ APA Sbjct: 31 FSRRPVACVMSNSSKIDYWTCINADIETHLKEAIPVRPPVVVFEPMHHLTFAAPRSFAPA 90 Query: 961 LCVAACELVGGDXXXXXXXXXXXXXXXXXAYIHEHLPLTDRPRP--KPTVHHKYNPNIEL 788 LC+AACELVGG A+ HE++PLTDRPRP +P HH + PNIEL Sbjct: 91 LCIAACELVGGSRDQALAAASALRLMIAAAFTHENIPLTDRPRPSARPMFHHTFGPNIEL 150 Query: 787 LTGDGIIPFGLELLARSMDLAQNNQDKILRVIIEITRATGSQGVVDGQYQELGIDE-IGS 611 LTGDG+IPF ELLA+ + AQ+N D+ILRV+IEI+RA GSQG+V+GQY E D+ +G Sbjct: 151 LTGDGMIPFAFELLAQLNNPAQDNSDRILRVMIEISRAMGSQGMVEGQYNEFQYDQSVGD 210 Query: 610 TDYEI--VEYVSKKKEGELHXXXXXXXXXXXXXXXXXXEKLRNFGLYAGMLRGLLGK 446 + + + V KKKEG H EKLR +GLY G ++G+ K Sbjct: 211 ELFHVAWLRDVCKKKEGASHACAGACGAILGGGNEEEIEKLRRYGLYVGTIQGIYNK 267 >ref|XP_002322072.2| hypothetical protein POPTR_0015s04050g [Populus trichocarpa] gi|550321901|gb|EEF06199.2| hypothetical protein POPTR_0015s04050g [Populus trichocarpa] Length = 312 Score = 213 bits (543), Expect = 1e-52 Identities = 118/244 (48%), Positives = 152/244 (62%), Gaps = 9/244 (3%) Frame = -1 Query: 1156 PKSSTNLSRFTPRAMAAA---------QNQSYWVSIEADVETYLKKAIPIRSPESVFEPM 1004 P+S+TN + R M A N+SYW S+ +++ +LK+AIPIR P SVFEPM Sbjct: 21 PRSNTNRPLLSHRPMTVAVTATSNGTTYNKSYWTSVNDEIDAHLKQAIPIRPPLSVFEPM 80 Query: 1003 HHLTFAAPRTTAPALCVAACELVGGDXXXXXXXXXXXXXXXXXAYIHEHLPLTDRPRPKP 824 HHLTFAAPRTTAPALC+AACELVGG+ A HEH+ T + Sbjct: 81 HHLTFAAPRTTAPALCIAACELVGGNRDQAMAAASALRLMHAAALTHEHILSTGN---RA 137 Query: 823 TVHHKYNPNIELLTGDGIIPFGLELLARSMDLAQNNQDKILRVIIEITRATGSQGVVDGQ 644 + H + NIELLTGDG++PFGLELLA+S DL QNN ++ILRVIIEIT+A GSQG+ GQ Sbjct: 138 RIGHSFGSNIELLTGDGMVPFGLELLAKSDDLTQNNSERILRVIIEITQAMGSQGMALGQ 197 Query: 643 YQELGIDEIGSTDYEIVEYVSKKKEGELHXXXXXXXXXXXXXXXXXXEKLRNFGLYAGML 464 Y + + G +DY +++V KKKEGELH EKLR +GLY G++ Sbjct: 198 YNQF---QHGQSDY--IDHVCKKKEGELHSCAGAVGAILGGGTEEEIEKLRRYGLYVGLM 252 Query: 463 RGLL 452 +G+L Sbjct: 253 QGVL 256 >gb|EPS64735.1| geranyl diphosphate synthase small subunit, partial [Genlisea aurea] Length = 211 Score = 212 bits (540), Expect = 3e-52 Identities = 110/211 (52%), Positives = 136/211 (64%), Gaps = 1/211 (0%) Frame = -1 Query: 1093 SYWVSIEADVETYLKKAIPIRSPESVFEPMHHLTFAAPRTTAPALCVAACELVGGDXXXX 914 SYW I+ DV+ YLK+AIP PE+V+EPM HLTFAAP TTA +LCVAACELVGGD Sbjct: 1 SYWEGIQCDVQLYLKEAIPRGPPEAVYEPMRHLTFAAPTTTASSLCVAACELVGGDRKQA 60 Query: 913 XXXXXXXXXXXXXAYIHEHLPLTD-RPRPKPTVHHKYNPNIELLTGDGIIPFGLELLARS 737 Y HEHLPLT+ P + + H+Y PNIELLTGDG+IPFG+EL+A+S Sbjct: 61 IAAAAALHLMHAALYAHEHLPLTEGHPPSRRPIEHRYGPNIELLTGDGLIPFGVELVAQS 120 Query: 736 MDLAQNNQDKILRVIIEITRATGSQGVVDGQYQELGIDEIGSTDYEIVEYVSKKKEGELH 557 MD + NN D+IL+VIIEITRATGSQG+VDG Y+ ++ +D +EYV KK EGE+H Sbjct: 121 MDPSSNNHDRILKVIIEITRATGSQGMVDGLYRRKNLELHSDSDITELEYVCKKIEGEIH 180 Query: 556 XXXXXXXXXXXXXXXXXXEKLRNFGLYAGML 464 E+LR FGL G + Sbjct: 181 ACGGACGAILGGAGEEEIERLRKFGLLVGTI 211 >dbj|BAF98300.1| geranyl-diphosphate synthase [Hevea brasiliensis] Length = 306 Score = 212 bits (540), Expect = 3e-52 Identities = 119/252 (47%), Positives = 153/252 (60%), Gaps = 4/252 (1%) Frame = -1 Query: 1189 HSHLNAKTNLFPKSSTNLSRFTPRAMAAAQNQSYWVSIEADVETYLKKAIPIRSPESVFE 1010 H +L A+ L P +A + +QSYW S+ AD++T+LK+AIPIR P +VFE Sbjct: 10 HGNLIARAVSSSNPKHPLFSHRPMVVAMSTDQSYWSSVNADLDTHLKQAIPIRQPLAVFE 69 Query: 1009 PMHHLTFAAPRTTAPALCVAACELVGGDXXXXXXXXXXXXXXXXXAYIHEHLPLTDRPRP 830 PM HL +AP+T+APALC+AACELVGG A HE+LPLTDRPRP Sbjct: 70 PMRHLILSAPQTSAPALCIAACELVGGHRNQAMAAASALRLVHASASTHENLPLTDRPRP 129 Query: 829 KP-TVHHKYNPNIELLTGDGIIPFGLELLARSMDLAQNNQDKILRVIIEITRATGSQGVV 653 P T Y PNIELL DGIIP+G ELLAR D A+NN +++LR IIEI+RA GSQGV+ Sbjct: 130 MPRTRPTLYGPNIELLIADGIIPYGFELLARDDDAAENNSNRVLRAIIEISRAMGSQGVI 189 Query: 652 DGQYQELGIDEI-GSTDYEI--VEYVSKKKEGELHXXXXXXXXXXXXXXXXXXEKLRNFG 482 +GQY E +E G + + ++ V +KKEG LH EKLR +G Sbjct: 190 EGQYNESQYEESEGEEIFHVGWLQNVCRKKEGTLHACAGACGAILGGGSEDEIEKLRRYG 249 Query: 481 LYAGMLRGLLGK 446 LY GM++G+L K Sbjct: 250 LYVGMVQGILSK 261 >ref|XP_004491403.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Cicer arietinum] Length = 302 Score = 203 bits (516), Expect = 2e-49 Identities = 105/216 (48%), Positives = 134/216 (62%), Gaps = 3/216 (1%) Frame = -1 Query: 1090 YWVSIEADVETYLKKAIPIRSPESVFEPMHHLTFAAPRTTAPALCVAACELVGGDXXXXX 911 YW S++AD+E +LK++I I+ P VFEPMHHL F AP+TT PALC+AACELVGG Sbjct: 50 YWASLQADIEAHLKQSITIKEPLVVFEPMHHLVFNAPKTTVPALCLAACELVGGQRNQAI 109 Query: 910 XXXXXXXXXXXXAYIHEHLPLTDRPRPKPTVHHKYNPNIELLTGDGIIPFGLELLARSMD 731 Y HEHL L+DRP+PKP + H Y PN+ELLTGDGI+PFG ELLARS Sbjct: 110 SAASALLLMEAATYTHEHLLLSDRPKPKPVITHAYGPNVELLTGDGIVPFGFELLARSN- 168 Query: 730 LAQNNQDKILRVIIEITRATGSQGVVDGQYQ---ELGIDEIGSTDYEIVEYVSKKKEGEL 560 N ++ILRV++EI+RA GS GV+D QY+ + G D E + V +K EGEL Sbjct: 169 -GGENSERILRVMVEISRAVGSGGVIDAQYRKTMDSGSDGDEMCHVEGIRRVVEKYEGEL 227 Query: 559 HXXXXXXXXXXXXXXXXXXEKLRNFGLYAGMLRGLL 452 H E+LRN+G Y GM++G+L Sbjct: 228 HACGAVCGGVLGGGSEEEIERLRNYGFYVGMIQGML 263 >gb|EXB38724.1| Heterodimeric geranylgeranyl pyrophosphate synthase small subunit [Morus notabilis] Length = 306 Score = 201 bits (512), Expect = 5e-49 Identities = 106/230 (46%), Positives = 142/230 (61%), Gaps = 8/230 (3%) Frame = -1 Query: 1123 PRAMAAAQNQS-YWVSIEADVETYLKKAIPIRSPESVFEPMHHLTFAAPRTTAPALCVAA 947 PR M +Q+QS Y SI AD+E +LK+AIP++SP SV+ PMHH+TF+AP APALCVAA Sbjct: 33 PRKMTTSQDQSSYRASITADIEAHLKQAIPLKSPLSVYAPMHHMTFSAPPNPAPALCVAA 92 Query: 946 CELVGGDXXXXXXXXXXXXXXXXXAYIHEHLPLTDRPRPKP----TVHHKYNPNIELLTG 779 CELVGGD ++ HEHLPLTDRP+PKP TV H +NPNIELL Sbjct: 93 CELVGGDRSKAMAAASALHLMHAASFTHEHLPLTDRPKPKPKPKPTVDHPFNPNIELLIP 152 Query: 778 DGIIPFGLELLARSMDLAQNNQDKILRVIIEITRATGSQGVVDGQYQELGIDEIGSTDYE 599 D ++PF EL A S D Q+ ++LRVI+E+ R GSQG+VD QY+E+ + + + Sbjct: 153 DAMVPFAYELSAVSDDPTQDTSGRVLRVIVELARVMGSQGIVDAQYREVLVSPLDGRELN 212 Query: 598 IVEYVS---KKKEGELHXXXXXXXXXXXXXXXXXXEKLRNFGLYAGMLRG 458 +E+V ++KEG LH E+LR +GLY G+++G Sbjct: 213 DIEWVDDMCRRKEGRLHACAAACGAILGGANEEEVERLRKYGLYVGIMQG 262 >ref|XP_006452381.1| hypothetical protein CICLE_v10008936mg [Citrus clementina] gi|568842242|ref|XP_006475060.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Citrus sinensis] gi|557555607|gb|ESR65621.1| hypothetical protein CICLE_v10008936mg [Citrus clementina] Length = 320 Score = 196 bits (498), Expect = 2e-47 Identities = 114/306 (37%), Positives = 160/306 (52%), Gaps = 19/306 (6%) Frame = -1 Query: 1186 SHLNAKTNLFPKSSTNLSRFTPRAMAAA-------QNQSYWVSIEADVETYLKKAIPIRS 1028 S LN ++ P+ + + + R M +N+SYW S+ D+ +L++A+ ++ Sbjct: 6 SVLNLPAHVAPRRNHSRPSLSYRPMMVTMAMSTPNKNKSYWTSVHEDIGAHLRQAVVVKE 65 Query: 1027 PESVFEPMHHLTFAAPRTTAPALCVAACELVGGDXXXXXXXXXXXXXXXXXAYIHEHLPL 848 P V+EPM H FAAP APALCVAACELVGG ++IHE+LPL Sbjct: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125 Query: 847 TDR----PRPKPTVHHKYNPNIELLTGDGIIPFGLELLARSMDLAQNNQDKILRVIIEIT 680 +DR P+ KPT++H + PN ELL D ++PFGLELLA S + A NN +ILRV++E+T Sbjct: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185 Query: 679 RATGSQGVVDGQYQELGIDEI--------GSTDYEIVEYVSKKKEGELHXXXXXXXXXXX 524 RA GSQGVV+GQY EL + G TD E+ KKKEG LH Sbjct: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245 Query: 523 XXXXXXXEKLRNFGLYAGMLRGLLGKNNSGIMXXXXXXXXXXXXXXXESFQGKRTELIAS 344 E LR +G Y GM++G++ + SF + E+I S Sbjct: 246 GGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVNSFNDENAEVIFS 305 Query: 343 LVEPSL 326 LV+ ++ Sbjct: 306 LVDDNI 311 >ref|XP_002278023.1| PREDICTED: geranylgeranyl pyrophosphate synthase-related protein, chloroplastic [Vitis vinifera] Length = 298 Score = 195 bits (496), Expect = 3e-47 Identities = 116/260 (44%), Positives = 148/260 (56%), Gaps = 11/260 (4%) Frame = -1 Query: 1207 MATGISHSHLNAKTNLFPKSSTNLSRFTPRAMAAAQNQSYWVSIEADVETYLKKAIPIRS 1028 MAT +H + + +S+ P + AQ SYW SI D++ +L++ I IR Sbjct: 1 MATAFTHINGQNFISTLHRSNHRRPSGGPIRVTMAQKSSYWTSINDDIDAHLRRVIAIRE 60 Query: 1027 PESVFEPMHHLTFAAPRTTAPALCVAACELVGGDXXXXXXXXXXXXXXXXXAYIHEHLPL 848 P SVF+PMHHLTFAAP TTAPALC+AACELVGG +Y HEH+PL Sbjct: 61 PFSVFKPMHHLTFAAPETTAPALCIAACELVGGRRELAIAAASALHLMHAASYFHEHIPL 120 Query: 847 TDRPRPK--PTVHHKYNPNIELLTGDGIIPFGLELLARSMDLAQNNQ--DKILRVIIEIT 680 TD+PR P + PNIELLTGDG+IPFGLELLA+S +L +++ D+IL+VIIE+T Sbjct: 121 TDQPRANSPPRPGPTFGPNIELLTGDGMIPFGLELLAKSNNLDDDDEHSDRILQVIIELT 180 Query: 679 RATGSQGVVDGQYQELGIDE-------IGSTDYEIVEYVSKKKEGELHXXXXXXXXXXXX 521 R GSQGVV+GQY + DE GST V+ KK ELH Sbjct: 181 RTIGSQGVVNGQYIQAQCDESSPSVGKAGST-----RIVTDKKGTELHACGAACGAILGG 235 Query: 520 XXXXXXEKLRNFGLYAGMLR 461 EKLR +G YAG ++ Sbjct: 236 GKEKEIEKLRKYGFYAGTIQ 255