BLASTX nr result
ID: Rehmannia25_contig00004067
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00004067
(377 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI19367.3| unnamed protein product [Vitis vinifera] 55 7e-09
ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 hom... 55 7e-09
ref|XP_004242948.1| PREDICTED: pre-mRNA-processing protein 40A-l... 55 9e-09
ref|XP_006343433.1| PREDICTED: pre-mRNA-processing protein 40A-l... 54 2e-08
ref|XP_006343434.1| PREDICTED: pre-mRNA-processing protein 40A-l... 54 2e-08
ref|XP_006343435.1| PREDICTED: pre-mRNA-processing protein 40A-l... 54 2e-08
ref|XP_003563698.1| PREDICTED: pre-mRNA-processing factor 40 hom... 53 9e-07
ref|XP_006827042.1| hypothetical protein AMTR_s00010p00227470 [A... 53 1e-06
ref|XP_006644253.1| PREDICTED: pre-mRNA-processing protein 40A-l... 52 1e-06
ref|XP_006644254.1| PREDICTED: pre-mRNA-processing protein 40A-l... 52 1e-06
ref|XP_006644255.1| PREDICTED: pre-mRNA-processing protein 40A-l... 52 1e-06
ref|XP_001768159.1| predicted protein [Physcomitrella patens] gi... 52 1e-06
gb|EMJ28229.1| hypothetical protein PRUPE_ppa000697mg [Prunus pe... 51 2e-06
ref|XP_004289761.1| PREDICTED: pre-mRNA-processing protein 40A-l... 50 2e-06
dbj|BAJ88075.1| predicted protein [Hordeum vulgare subsp. vulgare] 51 2e-06
ref|XP_002510055.1| protein binding protein, putative [Ricinus c... 51 2e-06
ref|XP_002522113.1| protein binding protein, putative [Ricinus c... 49 3e-06
ref|XP_004150264.1| PREDICTED: pre-mRNA-processing protein 40A-l... 49 3e-06
ref|XP_001774266.1| predicted protein [Physcomitrella patens] gi... 52 4e-06
gb|EEE54732.1| hypothetical protein OsJ_02081 [Oryza sativa Japo... 50 4e-06
>emb|CBI19367.3| unnamed protein product [Vitis vinifera]
Length = 1030
Score = 55.1 bits (131), Expect(2) = 7e-09
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = -3
Query: 336 QVDSQWRKVQDQLEDAERCTRLDKIVRLDIFQPMDRCLD 220
+V+SQWRKVQD+LED ERC+RL+KI RL+IFQ R L+
Sbjct: 623 KVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYIRDLE 661
Score = 30.4 bits (67), Expect(2) = 7e-09
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = -1
Query: 377 RLEFRQFLESCAFIKL 330
R+E+RQFLESC FIK+
Sbjct: 609 RMEYRQFLESCDFIKV 624
>ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Vitis
vinifera]
Length = 1020
Score = 55.1 bits (131), Expect(2) = 7e-09
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = -3
Query: 336 QVDSQWRKVQDQLEDAERCTRLDKIVRLDIFQPMDRCLD 220
+V+SQWRKVQD+LED ERC+RL+KI RL+IFQ R L+
Sbjct: 613 KVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYIRDLE 651
Score = 30.4 bits (67), Expect(2) = 7e-09
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = -1
Query: 377 RLEFRQFLESCAFIKL 330
R+E+RQFLESC FIK+
Sbjct: 599 RMEYRQFLESCDFIKV 614
>ref|XP_004242948.1| PREDICTED: pre-mRNA-processing protein 40A-like [Solanum
lycopersicum]
Length = 998
Score = 55.5 bits (132), Expect(2) = 9e-09
Identities = 26/39 (66%), Positives = 32/39 (82%)
Frame = -3
Query: 336 QVDSQWRKVQDQLEDAERCTRLDKIVRLDIFQPMDRCLD 220
+VD+QWRKVQD LED ERC+RL+K+ RLDIFQ R L+
Sbjct: 591 KVDTQWRKVQDLLEDDERCSRLEKLDRLDIFQEYIRDLE 629
Score = 29.6 bits (65), Expect(2) = 9e-09
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -1
Query: 377 RLEFRQFLESCAFIKL 330
RLE++QFLE+C FIK+
Sbjct: 577 RLEYKQFLETCGFIKV 592
>ref|XP_006343433.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X1 [Solanum
tuberosum]
Length = 1031
Score = 53.9 bits (128), Expect(2) = 2e-08
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = -3
Query: 336 QVDSQWRKVQDQLEDAERCTRLDKIVRLDIFQPMDRCLD 220
+VD+QWRKVQD LED ERC+RL+K+ RL+IFQ R L+
Sbjct: 591 KVDTQWRKVQDLLEDDERCSRLEKLDRLEIFQEYIRDLE 629
Score = 29.6 bits (65), Expect(2) = 2e-08
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -1
Query: 377 RLEFRQFLESCAFIKL 330
RLE++QFLE+C FIK+
Sbjct: 577 RLEYKQFLETCGFIKV 592
>ref|XP_006343434.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X2 [Solanum
tuberosum]
Length = 872
Score = 53.9 bits (128), Expect(2) = 2e-08
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = -3
Query: 336 QVDSQWRKVQDQLEDAERCTRLDKIVRLDIFQPMDRCLD 220
+VD+QWRKVQD LED ERC+RL+K+ RL+IFQ R L+
Sbjct: 591 KVDTQWRKVQDLLEDDERCSRLEKLDRLEIFQEYIRDLE 629
Score = 29.6 bits (65), Expect(2) = 2e-08
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -1
Query: 377 RLEFRQFLESCAFIKL 330
RLE++QFLE+C FIK+
Sbjct: 577 RLEYKQFLETCGFIKV 592
>ref|XP_006343435.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X3 [Solanum
tuberosum]
Length = 864
Score = 53.9 bits (128), Expect(2) = 2e-08
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = -3
Query: 336 QVDSQWRKVQDQLEDAERCTRLDKIVRLDIFQPMDRCLD 220
+VD+QWRKVQD LED ERC+RL+K+ RL+IFQ R L+
Sbjct: 591 KVDTQWRKVQDLLEDDERCSRLEKLDRLEIFQEYIRDLE 629
Score = 29.6 bits (65), Expect(2) = 2e-08
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -1
Query: 377 RLEFRQFLESCAFIKL 330
RLE++QFLE+C FIK+
Sbjct: 577 RLEYKQFLETCGFIKV 592
>ref|XP_003563698.1| PREDICTED: pre-mRNA-processing factor 40 homolog A-like
[Brachypodium distachyon]
Length = 998
Score = 53.1 bits (126), Expect(2) = 9e-07
Identities = 24/39 (61%), Positives = 31/39 (79%)
Frame = -3
Query: 336 QVDSQWRKVQDQLEDAERCTRLDKIVRLDIFQPMDRCLD 220
+ +QWRKVQD+LED ERC+RL+KI RLD+FQ R L+
Sbjct: 583 KASTQWRKVQDRLEDDERCSRLEKIDRLDVFQEYIRDLE 621
Score = 25.0 bits (53), Expect(2) = 9e-07
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1
Query: 371 EFRQFLESCAFIK 333
E+R FLESC FIK
Sbjct: 571 EYRAFLESCDFIK 583
>ref|XP_006827042.1| hypothetical protein AMTR_s00010p00227470 [Amborella trichopoda]
gi|548831471|gb|ERM94279.1| hypothetical protein
AMTR_s00010p00227470 [Amborella trichopoda]
Length = 985
Score = 52.8 bits (125), Expect(2) = 1e-06
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = -3
Query: 336 QVDSQWRKVQDQLEDAERCTRLDKIVRLDIFQPMDRCLD 220
+ SQWRKVQD+LED ERC RL+KI RL+IFQ R L+
Sbjct: 581 KASSQWRKVQDRLEDDERCARLEKIDRLEIFQEYIRDLE 619
Score = 25.0 bits (53), Expect(2) = 1e-06
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1
Query: 371 EFRQFLESCAFIK 333
E+R FLESC FIK
Sbjct: 569 EYRAFLESCDFIK 581
>ref|XP_006644253.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X1 [Oryza
brachyantha]
Length = 866
Score = 52.4 bits (124), Expect(2) = 1e-06
Identities = 24/39 (61%), Positives = 32/39 (82%)
Frame = -3
Query: 336 QVDSQWRKVQDQLEDAERCTRLDKIVRLDIFQPMDRCLD 220
+ ++QWRKVQD+LED ERC+RL+KI RL+IFQ R L+
Sbjct: 459 KANTQWRKVQDRLEDDERCSRLEKIDRLEIFQEYIRDLE 497
Score = 25.4 bits (54), Expect(2) = 1e-06
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1
Query: 371 EFRQFLESCAFIK 333
E+R FLESC FIK
Sbjct: 447 EYRAFLESCEFIK 459
>ref|XP_006644254.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X2 [Oryza
brachyantha]
Length = 865
Score = 52.4 bits (124), Expect(2) = 1e-06
Identities = 24/39 (61%), Positives = 32/39 (82%)
Frame = -3
Query: 336 QVDSQWRKVQDQLEDAERCTRLDKIVRLDIFQPMDRCLD 220
+ ++QWRKVQD+LED ERC+RL+KI RL+IFQ R L+
Sbjct: 458 KANTQWRKVQDRLEDDERCSRLEKIDRLEIFQEYIRDLE 496
Score = 25.4 bits (54), Expect(2) = 1e-06
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1
Query: 371 EFRQFLESCAFIK 333
E+R FLESC FIK
Sbjct: 446 EYRAFLESCEFIK 458
>ref|XP_006644255.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X3 [Oryza
brachyantha]
Length = 840
Score = 52.4 bits (124), Expect(2) = 1e-06
Identities = 24/39 (61%), Positives = 32/39 (82%)
Frame = -3
Query: 336 QVDSQWRKVQDQLEDAERCTRLDKIVRLDIFQPMDRCLD 220
+ ++QWRKVQD+LED ERC+RL+KI RL+IFQ R L+
Sbjct: 433 KANTQWRKVQDRLEDDERCSRLEKIDRLEIFQEYIRDLE 471
Score = 25.4 bits (54), Expect(2) = 1e-06
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1
Query: 371 EFRQFLESCAFIK 333
E+R FLESC FIK
Sbjct: 421 EYRAFLESCEFIK 433
>ref|XP_001768159.1| predicted protein [Physcomitrella patens]
gi|162680597|gb|EDQ67032.1| predicted protein
[Physcomitrella patens]
Length = 563
Score = 52.4 bits (124), Expect(2) = 1e-06
Identities = 23/39 (58%), Positives = 32/39 (82%)
Frame = -3
Query: 336 QVDSQWRKVQDQLEDAERCTRLDKIVRLDIFQPMDRCLD 220
+ ++QWRKVQD+LED ERC+RLDK+ RL++FQ R L+
Sbjct: 66 KANTQWRKVQDRLEDDERCSRLDKLDRLEVFQEYIRELE 104
Score = 25.4 bits (54), Expect(2) = 1e-06
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1
Query: 371 EFRQFLESCAFIK 333
E+R FLESC FIK
Sbjct: 54 EYRSFLESCDFIK 66
>gb|EMJ28229.1| hypothetical protein PRUPE_ppa000697mg [Prunus persica]
Length = 1031
Score = 51.2 bits (121), Expect(2) = 2e-06
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = -3
Query: 336 QVDSQWRKVQDQLEDAERCTRLDKIVRLDIFQPMDRCLD 220
+V+SQWRKVQD+LED ERC RL+K+ RL IFQ R L+
Sbjct: 627 KVNSQWRKVQDRLEDDERCLRLEKLDRLLIFQDYIRDLE 665
Score = 26.2 bits (56), Expect(2) = 2e-06
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = -1
Query: 371 EFRQFLESCAFIKL 330
E+R+FLESC FIK+
Sbjct: 615 EYRKFLESCDFIKV 628
>ref|XP_004289761.1| PREDICTED: pre-mRNA-processing protein 40A-like [Fragaria vesca
subsp. vesca]
Length = 1028
Score = 49.7 bits (117), Expect(2) = 2e-06
Identities = 24/39 (61%), Positives = 30/39 (76%)
Frame = -3
Query: 336 QVDSQWRKVQDQLEDAERCTRLDKIVRLDIFQPMDRCLD 220
+ SQWRKVQD+LE ERC+RL+KI RL+IFQ R L+
Sbjct: 610 KASSQWRKVQDRLEADERCSRLEKIDRLEIFQEYLRDLE 648
Score = 27.7 bits (60), Expect(2) = 2e-06
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -1
Query: 374 LEFRQFLESCAFIK 333
+E+RQFLESC FIK
Sbjct: 597 VEYRQFLESCDFIK 610
>dbj|BAJ88075.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 987
Score = 50.8 bits (120), Expect(2) = 2e-06
Identities = 24/39 (61%), Positives = 31/39 (79%)
Frame = -3
Query: 336 QVDSQWRKVQDQLEDAERCTRLDKIVRLDIFQPMDRCLD 220
+ ++QWRKVQD+LED ER TRL+KI RLD+FQ R L+
Sbjct: 576 KANTQWRKVQDRLEDDERYTRLEKIDRLDVFQDYIRHLE 614
Score = 26.2 bits (56), Expect(2) = 2e-06
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -1
Query: 371 EFRQFLESCAFIK 333
E+R+FLESC FIK
Sbjct: 564 EYREFLESCDFIK 576
>ref|XP_002510055.1| protein binding protein, putative [Ricinus communis]
gi|223550756|gb|EEF52242.1| protein binding protein,
putative [Ricinus communis]
Length = 970
Score = 50.8 bits (120), Expect(2) = 2e-06
Identities = 24/39 (61%), Positives = 31/39 (79%)
Frame = -3
Query: 336 QVDSQWRKVQDQLEDAERCTRLDKIVRLDIFQPMDRCLD 220
+V+SQWRKVQD+LED ERC RL+K+ RL +FQ R L+
Sbjct: 563 KVNSQWRKVQDRLEDDERCLRLEKLDRLLVFQDYIRDLE 601
Score = 26.2 bits (56), Expect(2) = 2e-06
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = -1
Query: 371 EFRQFLESCAFIKL 330
EF++FLESC FIK+
Sbjct: 551 EFKKFLESCDFIKV 564
>ref|XP_002522113.1| protein binding protein, putative [Ricinus communis]
gi|223538712|gb|EEF40313.1| protein binding protein,
putative [Ricinus communis]
Length = 956
Score = 48.5 bits (114), Expect(2) = 3e-06
Identities = 23/39 (58%), Positives = 30/39 (76%)
Frame = -3
Query: 336 QVDSQWRKVQDQLEDAERCTRLDKIVRLDIFQPMDRCLD 220
+ +QWRKVQD+LE ERC+RL+KI RL+IFQ R L+
Sbjct: 553 KASTQWRKVQDRLEADERCSRLEKIDRLEIFQDYLRDLE 591
Score = 28.1 bits (61), Expect(2) = 3e-06
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -1
Query: 374 LEFRQFLESCAFIK 333
+E+RQFLESC FIK
Sbjct: 540 MEYRQFLESCDFIK 553
>ref|XP_004150264.1| PREDICTED: pre-mRNA-processing protein 40A-like [Cucumis sativus]
Length = 796
Score = 49.3 bits (116), Expect(2) = 3e-06
Identities = 24/39 (61%), Positives = 30/39 (76%)
Frame = -3
Query: 336 QVDSQWRKVQDQLEDAERCTRLDKIVRLDIFQPMDRCLD 220
+ SQWRKVQD+LE ERC+RL+KI RL+IFQ R L+
Sbjct: 396 KASSQWRKVQDRLEVDERCSRLEKIDRLEIFQEYLRDLE 434
Score = 27.3 bits (59), Expect(2) = 3e-06
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -1
Query: 374 LEFRQFLESCAFIK 333
LE+R+FLESC FIK
Sbjct: 383 LEYRKFLESCDFIK 396
>ref|XP_001774266.1| predicted protein [Physcomitrella patens]
gi|162674393|gb|EDQ60902.1| predicted protein
[Physcomitrella patens]
Length = 1182
Score = 52.0 bits (123), Expect(2) = 4e-06
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = -3
Query: 327 SQWRKVQDQLEDAERCTRLDKIVRLDIFQPMDRCLD 220
+QWRKVQD+LED ERC+RLDK+ RL++FQ R L+
Sbjct: 731 TQWRKVQDRLEDDERCSRLDKLDRLEVFQEYIRDLE 766
Score = 23.9 bits (50), Expect(2) = 4e-06
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -1
Query: 371 EFRQFLESCAFIK 333
E+R +LE+C FIK
Sbjct: 716 EYRSYLENCGFIK 728
>gb|EEE54732.1| hypothetical protein OsJ_02081 [Oryza sativa Japonica Group]
Length = 1002
Score = 50.4 bits (119), Expect(2) = 4e-06
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = -3
Query: 336 QVDSQWRKVQDQLEDAERCTRLDKIVRLDIFQPMDRCLD 220
+ +QWRKVQ++LED ERC+RL+KI RL+IFQ R L+
Sbjct: 589 KTSTQWRKVQERLEDDERCSRLEKIDRLEIFQEYIRDLE 627
Score = 25.4 bits (54), Expect(2) = 4e-06
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1
Query: 371 EFRQFLESCAFIK 333
E+R FLESC FIK
Sbjct: 577 EYRAFLESCEFIK 589