BLASTX nr result
ID: Rehmannia25_contig00003437
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00003437
(579 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA30522.1| ORF 143 [Glycine max] 103 6e-55
gb|AFK49064.1| unknown [Lotus japonicus] 111 1e-42
ref|NP_862801.1| hypothetical protein CafeCp090 [Calycanthus flo... 140 2e-31
ref|YP_358631.1| hypothetical protein PhapfoPp085 [Phalaenopsis ... 130 2e-28
ref|YP_001109550.1| hypothetical protein Poptr_cp072 [Populus tr... 102 9e-21
tpg|DAA60526.1| TPA: hypothetical protein ZEAMMB73_222606 [Zea m... 101 2e-19
ref|XP_002519781.1| conserved hypothetical protein [Ricinus comm... 63 9e-15
gb|AFW69302.1| hypothetical protein ZEAMMB73_079346 [Zea mays] 71 6e-14
ref|XP_002894684.1| hypothetical protein ARALYDRAFT_892903 [Arab... 80 5e-13
ref|YP_009002279.1| ribosomal protein S12 (chloroplast) [Pinguic... 79 8e-13
gb|AFW59336.1| hypothetical protein ZEAMMB73_738558 [Zea mays] 79 8e-13
gb|AFS35523.1| ribosomal protein S12, partial [Fragaria moschata] 75 2e-11
ref|XP_002449659.1| hypothetical protein SORBIDRAFT_05g021128 [S... 66 4e-11
ref|YP_001152253.1| ORF40x [Pinus koraiensis] gi|145048878|gb|AB... 69 9e-10
ref|YP_001312254.1| hypothetical protein CYtaCp089 [Cycas taitun... 67 3e-09
ref|YP_007474607.1| hypothetical_protein (chloroplast) [Cycas re... 62 8e-08
>emb|CAA30522.1| ORF 143 [Glycine max]
Length = 143
Score = 103 bits (258), Expect(3) = 6e-55
Identities = 51/55 (92%), Positives = 53/55 (96%)
Frame = -2
Query: 167 TDTQFKVSKQNSILDLIDTYRILRKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 3
TDTQF+VSKQNSILD+IDTYRIL KAVFDESRMYGLEGDLSYLSRSTLQYG KKP
Sbjct: 88 TDTQFQVSKQNSILDIIDTYRILWKAVFDESRMYGLEGDLSYLSRSTLQYGAKKP 142
Score = 101 bits (252), Expect(3) = 6e-55
Identities = 53/62 (85%), Positives = 54/62 (87%)
Frame = -1
Query: 432 MRQKIFFLKRFDSELLYVQGSILK*FQRFSLTLSVSTNNSKYLDFFRTGPSQIAMIRSTS 253
MRQKIFFLK+FDSEL YVQG I K FQRFSLTLSVSTNNSK LDFFR GPSQIAMIRST
Sbjct: 1 MRQKIFFLKKFDSELRYVQGPIWKEFQRFSLTLSVSTNNSKCLDFFRIGPSQIAMIRSTL 60
Query: 252 FY 247
Y
Sbjct: 61 HY 62
Score = 56.2 bits (134), Expect(3) = 6e-55
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = -3
Query: 250 LHNFGNPRTQSYGYVKYRISNPSRKGG 170
LH FGNPRTQSYGYVKYRISNPSRK G
Sbjct: 60 LHYFGNPRTQSYGYVKYRISNPSRKRG 86
>gb|AFK49064.1| unknown [Lotus japonicus]
Length = 128
Score = 111 bits (278), Expect(2) = 1e-42
Identities = 55/57 (96%), Positives = 56/57 (98%)
Frame = -2
Query: 173 RETDTQFKVSKQNSILDLIDTYRILRKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 3
RETDTQF+VSKQNSILDLIDTYRILRKAVFDESRMYGLEGDLSYLSRSTLQYG KKP
Sbjct: 71 RETDTQFQVSKQNSILDLIDTYRILRKAVFDESRMYGLEGDLSYLSRSTLQYGAKKP 127
Score = 87.8 bits (216), Expect(2) = 1e-42
Identities = 48/71 (67%), Positives = 52/71 (73%)
Frame = -3
Query: 388 LICPRFNIEIISEVFPDFVRVNKQFEIPRLF*NRSESNSNDSKHFFLHNFGNPRTQSYGY 209
+ICPR NIE ISEVF DFVRVNKQFE+PRLF R + LH F N RTQSYGY
Sbjct: 1 MICPRSNIERISEVFLDFVRVNKQFEMPRLF--RLGPSQIAMIRSTLHYFENLRTQSYGY 58
Query: 208 VKYRISNPSRK 176
VKYRISNPS+K
Sbjct: 59 VKYRISNPSKK 69
>ref|NP_862801.1| hypothetical protein CafeCp090 [Calycanthus floridus var. glaucus]
gi|32480905|ref|NP_862814.1| hypothetical protein
CafeCp092 [Calycanthus floridus var. glaucus]
gi|75146241|sp|Q7Y618.1|YCX1_CALFG RecName:
Full=Uncharacterized 8.8 kDa protein in rps12-tRNA-Val
intergenic region gi|32399427|emb|CAD28768.1|
hypothetical protein [Calycanthus floridus var. glaucus]
gi|32399441|emb|CAD28782.1| hypothetical protein
[Calycanthus floridus var. glaucus]
Length = 75
Score = 140 bits (354), Expect = 2e-31
Identities = 72/75 (96%), Positives = 72/75 (96%)
Frame = -1
Query: 432 MRQKIFFLKRFDSELLYVQGSILK*FQRFSLTLSVSTNNSKYLDFFRTGPSQIAMIRSTS 253
MRQKIFFLKRFDSELLYVQGSILK FQRFSLTLSVSTNNSKYLDFFRTGPSQIA IRSTS
Sbjct: 1 MRQKIFFLKRFDSELLYVQGSILKSFQRFSLTLSVSTNNSKYLDFFRTGPSQIATIRSTS 60
Query: 252 FYTISETQGLNHMDM 208
FYTISETQGLN MDM
Sbjct: 61 FYTISETQGLNRMDM 75
>ref|YP_358631.1| hypothetical protein PhapfoPp085 [Phalaenopsis aphrodite subsp.
formosana] gi|58802847|gb|AAW82567.1| hypothetical
protein [Phalaenopsis aphrodite subsp. formosana]
Length = 77
Score = 130 bits (327), Expect = 2e-28
Identities = 67/75 (89%), Positives = 67/75 (89%)
Frame = +2
Query: 251 KEVLRIIAI*LGPVLKKSRYFELFVDTDKVRENL*NYFNIEPWTYKSSESNLFRKKIFCL 430
KEVLRIIAI LGPVLKKSRYFELFVDTDK RENL NY NI PWTY SSESNLFRKK FCL
Sbjct: 3 KEVLRIIAIGLGPVLKKSRYFELFVDTDKGRENLLNYSNIGPWTYSSSESNLFRKKSFCL 62
Query: 431 MVACSSPLTKLSLLG 475
MVACSSPL KLSLLG
Sbjct: 63 MVACSSPLPKLSLLG 77
>ref|YP_001109550.1| hypothetical protein Poptr_cp072 [Populus trichocarpa]
gi|134093268|ref|YP_001109569.1| hypothetical protein
Poptr_cp092 [Populus trichocarpa]
gi|133712111|gb|ABO36754.1| conserved hypothetical
protein [Populus trichocarpa]
gi|133712130|gb|ABO36773.1| conserved hypothetical
protein [Populus trichocarpa]
Length = 65
Score = 102 bits (254), Expect(2) = 9e-21
Identities = 51/58 (87%), Positives = 53/58 (91%)
Frame = -1
Query: 342 LTLSVSTNNSKYLDFFRTGPSQIAMIRSTSFYTISETQGLNHMDM*NTGFPILAGREG 169
+TLSVSTNNSK LDFFR GPSQIAMIRSTSFYTISETQGLN MDM NTGFPILAG+ G
Sbjct: 1 MTLSVSTNNSKCLDFFRAGPSQIAMIRSTSFYTISETQGLNRMDMENTGFPILAGKGG 58
Score = 23.9 bits (50), Expect(2) = 9e-21
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3
Query: 178 KGGKRILNLK 149
KGGKRILNLK
Sbjct: 56 KGGKRILNLK 65
>tpg|DAA60526.1| TPA: hypothetical protein ZEAMMB73_222606 [Zea mays]
Length = 57
Score = 101 bits (251), Expect = 2e-19
Identities = 50/54 (92%), Positives = 51/54 (94%)
Frame = -2
Query: 164 DTQFKVSKQNSILDLIDTYRILRKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 3
DTQFKVSKQNSILDLID YRIL KAVFDESRMYGLEGDLSY+SRSTLQYG KKP
Sbjct: 2 DTQFKVSKQNSILDLIDPYRILWKAVFDESRMYGLEGDLSYISRSTLQYGAKKP 55
>ref|XP_002519781.1| conserved hypothetical protein [Ricinus communis]
gi|223541020|gb|EEF42577.1| conserved hypothetical
protein [Ricinus communis]
Length = 286
Score = 63.2 bits (152), Expect(2) = 9e-15
Identities = 29/32 (90%), Positives = 29/32 (90%)
Frame = +3
Query: 84 EYGFPQNSICIYEIEYGILFTHFKLSIRFPPF 179
EYGF QNSICIYEIEYGILFTHFKLSI PPF
Sbjct: 232 EYGFLQNSICIYEIEYGILFTHFKLSICSPPF 263
Score = 42.7 bits (99), Expect(2) = 9e-15
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +2
Query: 170 PSLPARIGNPVFYISI*LSPWVSEIV 247
P PARIGNPVFYISI LSP VS+IV
Sbjct: 261 PPFPARIGNPVFYISIRLSPRVSKIV 286
>gb|AFW69302.1| hypothetical protein ZEAMMB73_079346 [Zea mays]
Length = 53
Score = 71.2 bits (173), Expect(2) = 6e-14
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = +3
Query: 75 TFIEYGFPQNSICIYEIEYGILFTHFKLSIRFPPF 179
TFIEYGFPQNSI IYEIEYGILFTHFKLSI FPPF
Sbjct: 2 TFIEYGFPQNSIGIYEIEYGILFTHFKLSICFPPF 36
Score = 32.0 bits (71), Expect(2) = 6e-14
Identities = 15/21 (71%), Positives = 15/21 (71%)
Frame = +2
Query: 167 FPSLPARIGNPVFYISI*LSP 229
FP PAR GNPVF ISI SP
Sbjct: 33 FPPFPARTGNPVFSISIRSSP 53
>ref|XP_002894684.1| hypothetical protein ARALYDRAFT_892903 [Arabidopsis lyrata subsp.
lyrata] gi|297340526|gb|EFH70943.1| hypothetical protein
ARALYDRAFT_892903 [Arabidopsis lyrata subsp. lyrata]
Length = 60
Score = 79.7 bits (195), Expect = 5e-13
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = -1
Query: 342 LTLSVSTNNSKYLDFFRTGPSQIAMIRSTSFYTISETQGLNHMDM 208
+TLSVSTNNSK LDFFRT PSQIAMIRST FYTISETQGLN MDM
Sbjct: 16 VTLSVSTNNSKCLDFFRTDPSQIAMIRSTYFYTISETQGLNRMDM 60
>ref|YP_009002279.1| ribosomal protein S12 (chloroplast) [Pinguicula ehlersiae]
gi|575882162|emb|CDL78835.1| ribosomal protein S12
(chloroplast) [Pinguicula ehlersiae]
Length = 156
Score = 79.0 bits (193), Expect = 8e-13
Identities = 38/40 (95%), Positives = 39/40 (97%)
Frame = -2
Query: 122 LIDTYRILRKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 3
+IDTYRILRKAVFDESRMYGL GDLSYLSRSTLQYGVKKP
Sbjct: 116 IIDTYRILRKAVFDESRMYGLGGDLSYLSRSTLQYGVKKP 155
>gb|AFW59336.1| hypothetical protein ZEAMMB73_738558 [Zea mays]
Length = 52
Score = 79.0 bits (193), Expect = 8e-13
Identities = 37/44 (84%), Positives = 40/44 (90%)
Frame = -3
Query: 376 RFNIEIISEVFPDFVRVNKQFEIPRLF*NRSESNSNDSKHFFLH 245
+ N+EI+SEVFP FVRVNKQFEIPRLF NRSESNSNDSKHFF H
Sbjct: 3 KVNMEILSEVFPYFVRVNKQFEIPRLFQNRSESNSNDSKHFFFH 46
>gb|AFS35523.1| ribosomal protein S12, partial [Fragaria moschata]
Length = 40
Score = 74.7 bits (182), Expect = 2e-11
Identities = 37/39 (94%), Positives = 37/39 (94%)
Frame = -2
Query: 119 IDTYRILRKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 3
IDTY IL KAVFDESRMYGLEGDLSYLSRSTLQYGVKKP
Sbjct: 1 IDTYIILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 39
>ref|XP_002449659.1| hypothetical protein SORBIDRAFT_05g021128 [Sorghum bicolor]
gi|241935502|gb|EES08647.1| hypothetical protein
SORBIDRAFT_05g021128 [Sorghum bicolor]
Length = 67
Score = 66.2 bits (160), Expect(2) = 4e-11
Identities = 34/40 (85%), Positives = 36/40 (90%)
Frame = -1
Query: 372 SILK*FQRFSLTLSVSTNNSKYLDFFRTGPSQIAMIRSTS 253
SI K F+RFSLTLSVSTN+SKYLDF R GPSQIAMIRSTS
Sbjct: 9 SIWKLFERFSLTLSVSTNSSKYLDFLRIGPSQIAMIRSTS 48
Score = 27.3 bits (59), Expect(2) = 4e-11
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -2
Query: 260 ALLFTQFRKPKDSIIWICKI 201
+L T F+K KDSI+WI KI
Sbjct: 48 SLSITLFQKCKDSIVWIWKI 67
>ref|YP_001152253.1| ORF40x [Pinus koraiensis] gi|145048878|gb|ABP35493.1| ORF40x [Pinus
koraiensis]
Length = 40
Score = 68.9 bits (167), Expect = 9e-10
Identities = 30/38 (78%), Positives = 31/38 (81%)
Frame = -3
Query: 115 IHIEFCGKPYSMKVVCTAWREIFHIFRDPPYNMG*KSQ 2
+ IE CGKPYS KVVCT WREIFH FRDPPYNM KSQ
Sbjct: 1 MQIESCGKPYSTKVVCTVWREIFHTFRDPPYNMESKSQ 38
>ref|YP_001312254.1| hypothetical protein CYtaCp089 [Cycas taitungensis]
gi|150251552|ref|YP_001312284.1| hypothetical protein
CYtaCp120 [Cycas taitungensis]
gi|149941571|dbj|BAF64995.1| hypothetical protein
(chloroplast) [Cycas taitungensis]
gi|149941602|dbj|BAF65026.1| hypothetical protein
(chloroplast) [Cycas taitungensis]
Length = 64
Score = 67.4 bits (163), Expect = 3e-09
Identities = 34/46 (73%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Frame = +1
Query: 178 SC*DWKSCILHIHMIESLGFRNCVKR-SASNHCYLTRTCSKKVEVF 312
SC DWKS ILHI I+SLG + VK+ S SNHCYLTRTCSKKVEVF
Sbjct: 19 SCYDWKSRILHICTIKSLGSQKSVKKKSVSNHCYLTRTCSKKVEVF 64
>ref|YP_007474607.1| hypothetical_protein (chloroplast) [Cycas revoluta]
gi|372863084|gb|AEX99157.1| hypothetical_protein
(chloroplast) [Cycas revoluta]
Length = 60
Score = 62.4 bits (150), Expect = 8e-08
Identities = 32/45 (71%), Positives = 34/45 (75%)
Frame = +1
Query: 178 SC*DWKSCILHIHMIESLGFRNCVKRSASNHCYLTRTCSKKVEVF 312
SC DWKS ILHI I+SLG + V SNHCYLTRTCSKKVEVF
Sbjct: 19 SCYDWKSRILHICTIKSLGSQKSV---VSNHCYLTRTCSKKVEVF 60