BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00003061
         (531 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB74531.1| hypothetical protein L484_026228 [Morus notabilis]     117   2e-24
gb|AGV40503.1| hypothetical protein [Phaseolus vulgaris]              101   9e-20
ref|XP_004309472.1| PREDICTED: putative ribonuclease H protein A...   101   1e-19
ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein A...   100   2e-19
ref|XP_004308354.1| PREDICTED: putative ribonuclease H protein A...    97   2e-18
ref|XP_002522208.1| hypothetical protein RCOM_1732210 [Ricinus c...    97   3e-18
ref|XP_004292254.1| PREDICTED: putative ribonuclease H protein A...    95   9e-18
gb|EMJ14652.1| hypothetical protein PRUPE_ppa024777mg, partial [...    92   7e-17
ref|YP_008992387.1| hypothetical protein Salmi_Mp120 (mitochondr...    92   1e-16
ref|XP_004304923.1| PREDICTED: putative ribonuclease H protein A...    91   1e-16
ref|XP_004308308.1| PREDICTED: uncharacterized protein LOC101295...    89   5e-16
ref|XP_004309966.1| PREDICTED: putative ribonuclease H protein A...    87   2e-15
ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein A...    87   2e-15
ref|XP_004295654.1| PREDICTED: uncharacterized protein LOC101314...    87   3e-15
ref|XP_004289281.1| PREDICTED: putative ribonuclease H protein A...    86   4e-15
ref|XP_004308214.1| PREDICTED: putative ribonuclease H protein A...    86   7e-15
ref|XP_004305144.1| PREDICTED: putative ribonuclease H protein A...    86   7e-15
ref|XP_002531653.1| conserved hypothetical protein [Ricinus comm...    85   9e-15
ref|XP_004301904.1| PREDICTED: uncharacterized protein LOC101292...    84   2e-14
gb|EOY24339.1| RNA-directed DNA polymerase (Reverse transcriptas...    84   3e-14

>gb|EXB74531.1| hypothetical protein L484_026228 [Morus notabilis]
          Length = 203

 Score =  117 bits (292), Expect = 2e-24
 Identities = 61/156 (39%), Positives = 81/156 (51%)
 Frame = -3

Query: 469 FEESKFSNVAIRAQVLSFIRETRHAPMGFMHNDCLDLFILRMLGIPGCHRRAKSPVLVRW 290
           FE +  S  A  A +LS I+  +   +G+ +N   ++ IL  L +     R+    LV W
Sbjct: 4   FEGASVSPTAACAFILSHIKSFKIFKLGYSYNSAFEIRILNKLYVRQNFPRSPKIFLVYW 63

Query: 289 NLPPPGWIKINTDGSAMGSPGDSACGGVFRNCHGFVTGCFTLHLGTGFAFLAELQGAITA 110
             PP GW+K+N D SA G+    ACGG+FRN  GFV  CF++ LG GFAF AEL   I A
Sbjct: 64  IPPPSGWVKVNIDSSAKGALDPIACGGIFRNARGFVCDCFSVFLGNGFAFEAELWAVINA 123

Query: 109 CEIALDKGWQFIWLEADXXXXXXXXXXXSLNVPWVL 2
             I  + GW  +WLE+D            L V W L
Sbjct: 124 ISITFENGWHKLWLESDSSLIICLLSFKFLQVSWKL 159


>gb|AGV40503.1| hypothetical protein [Phaseolus vulgaris]
          Length = 234

 Score =  101 bits (252), Expect = 9e-20
 Identities = 61/170 (35%), Positives = 83/170 (48%), Gaps = 4/170 (2%)
 Frame = -3

Query: 499 VIWSCRNKAVFEESKFSNVAIRAQVLSFIRETR----HAPMGFMHNDCLDLFILRMLGIP 332
           +IW  RN A F++    + AI     S I++      ++    M ND LD  +++  GI 
Sbjct: 1   MIWRMRNYARFQDKIGVSKAI-----SIIKDLTCLVGNSSKASMKNDMLDFNVIKFFGIK 55

Query: 331 GCHRRAKSPVLVRWNLPPPGWIKINTDGSAMGSPGDSACGGVFRNCHGFVTGCFTLHLGT 152
               +   P+ +RW  P PGW+KINTDG+A G PG + CGG+FR   G   G F+  L  
Sbjct: 56  TRSGKVLRPLPIRWEFPSPGWVKINTDGAARGYPGLATCGGIFRGSMGEFIGAFSAFLEV 115

Query: 151 GFAFLAELQGAITACEIALDKGWQFIWLEADXXXXXXXXXXXSLNVPWVL 2
             A +AE  G I A E A   G   +WLE D             NVPW+L
Sbjct: 116 QTALVAEFYGVIHAMEEAQKMGLTNVWLECD-SALVCAAFTARTNVPWML 164


>ref|XP_004309472.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 364

 Score =  101 bits (251), Expect = 1e-19
 Identities = 58/176 (32%), Positives = 82/176 (46%)
 Frame = -3

Query: 529 WKLTLITFLWVIWSCRNKAVFEESKFSNVAIRAQVLSFIRETRHAPMGFMHNDCLDLFIL 350
           W +   T LW IW  RNK   +       A+R  ++  ++      +G M N   +L +L
Sbjct: 134 WLICYTTTLWFIWKARNKMRHDNCTIVVDAVRQLIMGHVKTASKLALGCMSNSLTELRVL 193

Query: 349 RMLGIPGCHRRAKSPVLVRWNLPPPGWIKINTDGSAMGSPGDSACGGVFRNCHGFVTGCF 170
           +  G+     RA     V W+ P  GWIK+NTDG+   + G S  GG+FR+ HG   G F
Sbjct: 194 KKFGLLCRPHRAPRITEVNWHPPLFGWIKVNTDGAWQKTTGKSGYGGIFRDFHGSFLGAF 253

Query: 169 TLHLGTGFAFLAELQGAITACEIALDKGWQFIWLEADXXXXXXXXXXXSLNVPWVL 2
             +L    +  AE+   I A E+A  + W+ IWLE D            L VPW L
Sbjct: 254 ASNLEILNSVDAEVMAVIQAIELAWVRDWEHIWLEVDSIIVLNFLQDPHL-VPWRL 308


>ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 872

 Score =  100 bits (249), Expect = 2e-19
 Identities = 61/176 (34%), Positives = 80/176 (45%)
 Frame = -3

Query: 529  WKLTLITFLWVIWSCRNKAVFEESKFSNVAIRAQVLSFIRETRHAPMGFMHNDCLDLFIL 350
            W +   + LW IW  RN+  F+   FS   +   V   I+ +     G MHN   DL IL
Sbjct: 629  WLICFTSILWYIWHARNQIRFDSRTFSVAGVCRLVSRHIQASSRLATGHMHNTIHDLCIL 688

Query: 349  RMLGIPGCHRRAKSPVLVRWNLPPPGWIKINTDGSAMGSPGDSACGGVFRNCHGFVTGCF 170
            +  G     RR    V V W+ P  GWIKIN+DG+     G    G VFR   G   G F
Sbjct: 689  KSFGACCRSRRIPRMVEVIWHPPSIGWIKINSDGAWKHEEGIGGFGAVFRYYKGQFVGAF 748

Query: 169  TLHLGTGFAFLAELQGAITACEIALDKGWQFIWLEADXXXXXXXXXXXSLNVPWVL 2
              H+    +  A++   ITA E+A  + W+ +WLE D           SL VPW L
Sbjct: 749  ASHIDIPSSIAAKVMVVITAIELAWVRDWKHVWLEVDFSTVLDYIRSPSL-VPWQL 803


>ref|XP_004308354.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 235

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 55/146 (37%), Positives = 78/146 (53%)
 Frame = -3

Query: 496 IWSCRNKAVFEESKFSNVAIRAQVLSFIRETRHAPMGFMHNDCLDLFILRMLGIPGCHRR 317
           +W  RNK  F+    +   +   ++++IR+      G  +   LD  +L  LG+     +
Sbjct: 3   LWKARNKLRFDNRPPNFYTMCCSIMAWIRQISLFAPGH-YKGVLDARLLASLGVASKGGK 61

Query: 316 AKSPVLVRWNLPPPGWIKINTDGSAMGSPGDSACGGVFRNCHGFVTGCFTLHLGTGFAFL 137
           A     V W  P   WIK+NT+G A G+PG +ACGGVFR+  G   G F   LG   +F 
Sbjct: 62  APRIQHVLWQPPFFPWIKVNTNGLAKGNPGPAACGGVFRDASGGFLGSFCHSLGWKTSFY 121

Query: 136 AELQGAITACEIALDKGWQFIWLEAD 59
           +EL   I A EIA DKGW ++WLE+D
Sbjct: 122 SELYVVILAIEIAHDKGWVYLWLESD 147


>ref|XP_002522208.1| hypothetical protein RCOM_1732210 [Ricinus communis]
           gi|223538579|gb|EEF40183.1| hypothetical protein
           RCOM_1732210 [Ricinus communis]
          Length = 95

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 39/80 (48%), Positives = 57/80 (71%)
 Frame = -3

Query: 298 VRWNLPPPGWIKINTDGSAMGSPGDSACGGVFRNCHGFVTGCFTLHLGTGFAFLAELQGA 119
           ++W+ PPP WIK+N++G+  G+PG +  GG+FRNC G V GCF + L T +AF+AE++ A
Sbjct: 7   IKWHPPPPSWIKLNSNGATRGAPGTTGVGGLFRNCRGVVKGCFIVPLSTTYAFVAEIKAA 66

Query: 118 ITACEIALDKGWQFIWLEAD 59
           I   + A + GW  IWLE+D
Sbjct: 67  IYGIDKAYNFGWNKIWLESD 86


>ref|XP_004292254.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 197

 Score = 95.1 bits (235), Expect = 9e-18
 Identities = 50/125 (40%), Positives = 71/125 (56%)
 Frame = -3

Query: 382 MHNDCLDLFILRMLGIPGCHRRAKSPVLVRWNLPPPGWIKINTDGSAMGSPGDSACGGVF 203
           M N   +L IL  +GI G   +A   V V W++P    +K+NTDG+A GSPG +  GG+F
Sbjct: 1   MKNTVGELCILHRIGIKGRPSKAPKIVEVMWHVPSIYQVKLNTDGAARGSPGLAGFGGIF 60

Query: 202 RNCHGFVTGCFTLHLGTGFAFLAELQGAITACEIALDKGWQFIWLEADXXXXXXXXXXXS 23
           R+  G V GCF+ +LG   A  AELQ  I A ++A  +GW  +W+E+D            
Sbjct: 61  RDHLGHVLGCFSGNLGIANALEAELQTVIHAIQMASQRGWHSLWIESDSTLVIHFLSSFQ 120

Query: 22  LNVPW 8
           ++VPW
Sbjct: 121 VDVPW 125


>gb|EMJ14652.1| hypothetical protein PRUPE_ppa024777mg, partial [Prunus persica]
          Length = 465

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 60/177 (33%), Positives = 83/177 (46%), Gaps = 1/177 (0%)
 Frame = -3

Query: 529 WKLTLITFLWVIWSCRNKAVFEESKFSNVAIRAQ-VLSFIRETRHAPMGFMHNDCLDLFI 353
           W L   T +W+IW  RNK  FEE K S V+   + +++ +  +     G + N   DL I
Sbjct: 227 WLLMFRTIVWLIWDLRNKLRFEE-KVSTVSSNCRTIINHVPASSPLARGHILNKVHDLCI 285

Query: 352 LRMLGIPGCHRRAKSPVLVRWNLPPPGWIKINTDGSAMGSPGDSACGGVFRNCHGFVTGC 173
           +R +G+    R     V V W+ P  G++KI  DG+     G +  GGVFRN  G V G 
Sbjct: 286 IRSIGVHYRPRPNSKIVEVTWHPPCFGFVKIKIDGACKRDSGKAGSGGVFRNYQGHVLGA 345

Query: 172 FTLHLGTGFAFLAELQGAITACEIALDKGWQFIWLEADXXXXXXXXXXXSLNVPWVL 2
           F+ +L       AE+   I A E+A    W  IW+E D            L VPW L
Sbjct: 346 FSANLDVPSGVHAEVLAVIKAIELAWLHAWHNIWIETDSLLVTKFFRSPHL-VPWRL 401


>ref|YP_008992387.1| hypothetical protein Salmi_Mp120 (mitochondrion) [Salvia
           miltiorrhiza] gi|534292356|gb|AGU16648.1| hypothetical
           protein Salmi_Mp120 (mitochondrion) [Salvia
           miltiorrhiza]
          Length = 224

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 53/128 (41%), Positives = 72/128 (56%), Gaps = 1/128 (0%)
 Frame = -3

Query: 529 WKLTLITFLWVIWSCRNKAVFEESKFSNVAIRAQVLSFIRETR-HAPMGFMHNDCLDLFI 353
           WK   I  +W+IW+ RNK +FE  + +  +  + + S +R    HAPM   +N   DL I
Sbjct: 95  WKSATIGVIWLIWTVRNKHIFEGVRPNVFSAISYLWSSLRSCPVHAPM---NNSVSDLLI 151

Query: 352 LRMLGIPGCHRRAKSPVLVRWNLPPPGWIKINTDGSAMGSPGDSACGGVFRNCHGFVTGC 173
           L  L + G  R+A     V W  PP G IK+N+DGSAMG+PG  ACG VFR+  G V G 
Sbjct: 152 LHNLHVRGIPRKAPVITSVTWLPPPEGVIKMNSDGSAMGAPGVMACGAVFRDWKGRVLGS 211

Query: 172 FTLHLGTG 149
           F+  +  G
Sbjct: 212 FSKQMEQG 219


>ref|XP_004304923.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 209

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 51/122 (41%), Positives = 64/122 (52%)
 Frame = -3

Query: 367 LDLFILRMLGIPGCHRRAKSPVLVRWNLPPPGWIKINTDGSAMGSPGDSACGGVFRNCHG 188
           LD  +L  LG+     +A     V W  P   WIK+NTDG A G+P  +ACGGVFR+  G
Sbjct: 19  LDARLLAFLGVAPKGGKAPRIQHVLWQPPFFPWIKVNTDGLAKGNPSPAACGGVFRDASG 78

Query: 187 FVTGCFTLHLGTGFAFLAELQGAITACEIALDKGWQFIWLEADXXXXXXXXXXXSLNVPW 8
              G F   LG   +F +EL   I A EIA DKGW ++WLE+D           S + PW
Sbjct: 79  GFLGSFCQSLGWKTSFYSELYAVILAIEIAHDKGWVYLWLESDSVSVVACFSSKSFSPPW 138

Query: 7   VL 2
            L
Sbjct: 139 NL 140


>ref|XP_004308308.1| PREDICTED: uncharacterized protein LOC101295087 [Fragaria vesca
           subsp. vesca]
          Length = 227

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 58/181 (32%), Positives = 86/181 (47%), Gaps = 5/181 (2%)
 Frame = -3

Query: 529 WKLTLITFLWVIWSCRNKAVFEE-----SKFSNVAIRAQVLSFIRETRHAPMGFMHNDCL 365
           W    +  L+ IW  RN+A F+      SK  N+ I  QV++    +       M+N   
Sbjct: 31  WLTAFVVTLYCIWKFRNQARFDGVQPNVSKACNL-IFGQVVA----SNKISSSCMNNGVF 85

Query: 364 DLFILRMLGIPGCHRRAKSPVLVRWNLPPPGWIKINTDGSAMGSPGDSACGGVFRNCHGF 185
            L IL+ +G+P    +A   V V W+ P  GW+K+NTDG+   S G +  GG+FR+  G 
Sbjct: 86  YLSILKKVGVPCKPSKAPCIVEVNWHPPLFGWVKVNTDGAWRSSSGQAGYGGIFRDFRGG 145

Query: 184 VTGCFTLHLGTGFAFLAELQGAITACEIALDKGWQFIWLEADXXXXXXXXXXXSLNVPWV 5
           V G F  +     +  AE+   I A E++  + W+ +WLE D            L VPW 
Sbjct: 146 VLGVFCSNFNMASSVAAEVMAVIKAIELSWVRDWKHVWLEVDSSLVITFLRSPHL-VPWK 204

Query: 4   L 2
           L
Sbjct: 205 L 205


>ref|XP_004309966.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 197

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 47/125 (37%), Positives = 69/125 (55%)
 Frame = -3

Query: 382 MHNDCLDLFILRMLGIPGCHRRAKSPVLVRWNLPPPGWIKINTDGSAMGSPGDSACGGVF 203
           M N   +L IL  +GI G   +    V V W++     +K+NTDG+A GSPG +  GG+F
Sbjct: 1   MKNTVGELCILHRIGIKGRPSKVPKIVEVMWHVLSIYQVKLNTDGAARGSPGLAGFGGIF 60

Query: 202 RNCHGFVTGCFTLHLGTGFAFLAELQGAITACEIALDKGWQFIWLEADXXXXXXXXXXXS 23
           R+  G V  CF+ +LG   A  AELQ  I A ++A  +GW+ +W+E+D            
Sbjct: 61  RDHLGQVLCCFSGNLGIATALEAELQAVIHAIQMASQRGWRSLWIESDSTLVIHFLSSFQ 120

Query: 22  LNVPW 8
           ++VPW
Sbjct: 121 VDVPW 125


>ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 751

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 53/174 (30%), Positives = 80/174 (45%)
 Frame = -3

Query: 529  WKLTLITFLWVIWSCRNKAVFEESKFSNVAIRAQVLSFIRETRHAPMGFMHNDCLDLFIL 350
            W  + +  L  IW   NK  F+  + S + +   V +++R       G +    LD  +L
Sbjct: 574  WFASCLFALMAIWKSHNKLRFDNKQPSLMRVFRSVKAWVRYIAPYTPGCVRG-VLDSKVL 632

Query: 349  RMLGIPGCHRRAKSPVLVRWNLPPPGWIKINTDGSAMGSPGDSACGGVFRNCHGFVTGCF 170
              +G+    +   +  +V W+ P   W+K+NT+G + G+PG + CGGVFR+  G + G +
Sbjct: 633  SSMGVILVLKCQSALRIVLWHPPLIPWLKLNTNGFSKGNPGLAGCGGVFRDSFGRLIGGY 692

Query: 169  TLHLGTGFAFLAELQGAITACEIALDKGWQFIWLEADXXXXXXXXXXXSLNVPW 8
               LGT   F  EL   I   E A   GW  IWLE+D           S   PW
Sbjct: 693  CQGLGTQTTFFVELMTVILGVEFAFHFGWHHIWLESDSTTILQCISSSSFAPPW 746


>ref|XP_004295654.1| PREDICTED: uncharacterized protein LOC101314263 [Fragaria vesca
            subsp. vesca]
          Length = 839

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 52/137 (37%), Positives = 68/137 (49%)
 Frame = -3

Query: 496  IWSCRNKAVFEESKFSNVAIRAQVLSFIRETRHAPMGFMHNDCLDLFILRMLGIPGCHRR 317
            IW  RN   F E   +   +   + S IRE     +G MHN   +L   R LGI G   R
Sbjct: 703  IWDARNSIRFHERHSTPDCLIHSIKSQIREIDSWGLGTMHNSAGELCTFRALGIKGRASR 762

Query: 316  AKSPVLVRWNLPPPGWIKINTDGSAMGSPGDSACGGVFRNCHGFVTGCFTLHLGTGFAFL 137
            +     V W+ P    +K+NTDG+A G+PG +  GG+FR+  G   GCF   +G   A  
Sbjct: 763  SHQIREVHWHAPSVFQVKVNTDGAARGTPGLAGFGGIFRDHLGNCMGCFAGSMGIATALE 822

Query: 136  AELQGAITACEIALDKG 86
            AELQ  I A  +A  KG
Sbjct: 823  AELQAIIHAASMAARKG 839


>ref|XP_004289281.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 215

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 53/136 (38%), Positives = 66/136 (48%), Gaps = 3/136 (2%)
 Frame = -3

Query: 400 HAPMGFMHNDC---LDLFILRMLGIPGCHRRAKSPVLVRWNLPPPGWIKINTDGSAMGSP 230
           HAP      DC   LD  +L  +G+    R  K   LV W+ P   WIK+NTDG A G+P
Sbjct: 17  HAP-----GDCSGILDAQLLVKMGVTPS-RAQKRIRLVLWHPPLSPWIKLNTDGLAKGNP 70

Query: 229 GDSACGGVFRNCHGFVTGCFTLHLGTGFAFLAELQGAITACEIALDKGWQFIWLEADXXX 50
           G + CGGVFR+  G   G F+  +G    F +EL   I   E+A   GWQ +WLE D   
Sbjct: 71  GPATCGGVFRDYQGHFIGGFSTPIGHHNDFFSELLAVIIGIELAFQLGWQHVWLECDSTS 130

Query: 49  XXXXXXXXSLNVPWVL 2
                   S   PW L
Sbjct: 131 VVECFSKSSFVPPWQL 146


>ref|XP_004308214.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 409

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 56/177 (31%), Positives = 79/177 (44%), Gaps = 1/177 (0%)
 Frame = -3

Query: 529 WKLTLITFLWVIWSCRNKAVFEESKFSNVAIRAQVLSFIRETRHAPMGFMHNDCLDLFIL 350
           W +   T LW I   RNK   +       A+   ++  ++       G M N    L +L
Sbjct: 166 WLICYTTTLWFIGKARNKIRHDNCTIVVDAVHQLIMGHVKAVSKLASGCMSNSLTKLRVL 225

Query: 349 RMLGIPGCHR-RAKSPVLVRWNLPPPGWIKINTDGSAMGSPGDSACGGVFRNCHGFVTGC 173
           +  G+  CH  +A     V W+ P  GWIK+NTDG+   + G S  GG+FR+ HG   G 
Sbjct: 226 KKFGLL-CHPCQALRITKVNWHPPLFGWIKVNTDGAWQKTTGKSGYGGIFRDFHGSFLGA 284

Query: 172 FTLHLGTGFAFLAELQGAITACEIALDKGWQFIWLEADXXXXXXXXXXXSLNVPWVL 2
           F  +L    +  AE+   I A E+A  + W+ I LE D            L VPW L
Sbjct: 285 FASNLEIPNSVDAEVMAVIQAIELAWVRDWKHILLEVDSAIVLNFLHDPHL-VPWRL 340


>ref|XP_004305144.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 183

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 45/114 (39%), Positives = 57/114 (50%)
 Frame = -3

Query: 343 LGIPGCHRRAKSPVLVRWNLPPPGWIKINTDGSAMGSPGDSACGGVFRNCHGFVTGCFTL 164
           +G+    R  K   LV W+ P   WIK+NTDG A G+ G +ACGGVFR+  G   G F+ 
Sbjct: 1   MGVTPTSRAQKGIRLVLWHPPLSPWIKLNTDGLAKGNSGPAACGGVFRDYQGHFIGGFST 60

Query: 163 HLGTGFAFLAELQGAITACEIALDKGWQFIWLEADXXXXXXXXXXXSLNVPWVL 2
            +G   AF +EL   I   E+    GWQ +WLE D           S   PW L
Sbjct: 61  PIGHHNAFFSELLAVIIGIELTFQLGWQHVWLECDSTSVVECFSKSSFVPPWQL 114


>ref|XP_002531653.1| conserved hypothetical protein [Ricinus communis]
           gi|223528711|gb|EEF30723.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 160

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 46/127 (36%), Positives = 62/127 (48%)
 Frame = -3

Query: 388 GFMHNDCLDLFILRMLGIPGCHRRAKSPVLVRWNLPPPGWIKINTDGSAMGSPGDSACGG 209
           G M N+     IL+ L I G    A S + V W   P  WIK+NTD SA GSP  ++ GG
Sbjct: 34  GTMFNNTSKFQILKSLHIAGKPSGAPSIISVFWRSSPLVWIKVNTDRSAFGSPRSASLGG 93

Query: 208 VFRNCHGFVTGCFTLHLGTGFAFLAELQGAITACEIALDKGWQFIWLEADXXXXXXXXXX 29
           +F    G+  GCF   +   FA +AEL  A+     A + GW+ +WLE D          
Sbjct: 94  IFEISRGYPAGCFVFSICNSFAHIAELCAAMFVVLKAKEFGWRQLWLECDSMYVVHLFKN 153

Query: 28  XSLNVPW 8
             + +PW
Sbjct: 154 IDMLIPW 160


>ref|XP_004301904.1| PREDICTED: uncharacterized protein LOC101292910 [Fragaria vesca
            subsp. vesca]
          Length = 851

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 48/144 (33%), Positives = 71/144 (49%)
 Frame = -3

Query: 529  WKLTLITFLWVIWSCRNKAVFEESKFSNVAIRAQVLSFIRETRHAPMGFMHNDCLDLFIL 350
            W +   + LW +W  RNK  F+   FS  +I   +L  IR       G M+N   DL I+
Sbjct: 706  WLICFTSILWFVWHARNKTRFDRKSFSVASICHLILGHIRAASRLANGPMNNSVQDLRII 765

Query: 349  RMLGIPGCHRRAKSPVLVRWNLPPPGWIKINTDGSAMGSPGDSACGGVFRNCHGFVTGCF 170
            +  G   C R  ++P+ V W+ P  GW+KIN+DG    + G      VFR+  G V G F
Sbjct: 766  KSFGAE-C-RLGRAPIEVVWHPPVIGWVKINSDGVWKHAEGVGGFSAVFRDFKGHVIGAF 823

Query: 169  TLHLGTGFAFLAELQGAITACEIA 98
            + ++    +  AE+   I A E+A
Sbjct: 824  SSNIDIPSSVAAEVMTVIVAIELA 847


>gb|EOY24339.1| RNA-directed DNA polymerase (Reverse transcriptase),
           Polynucleotidyl transferase, Ribonuclease H fold-like
           protein [Theobroma cacao]
          Length = 616

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 49/160 (30%), Positives = 72/160 (45%), Gaps = 3/160 (1%)
 Frame = -3

Query: 529 WKLTLITFLWVIWSCRNKAVFEESKFSNVAIRAQVLSFIRETRHAPMGFMHNDCLDLFIL 350
           W +      W IW  RN  VFE          + +   +  + HA               
Sbjct: 442 WVILFGFTCWYIWKWRNVKVFEGKLIPMDRKLSMIKGLVAASYHA--------------- 486

Query: 349 RMLGIPGCHRRA---KSPVLVRWNLPPPGWIKINTDGSAMGSPGDSACGGVFRNCHGFVT 179
             + IP  H R    K  +LV W  PP GW+ +NTDG+   +   +A GGVFR+C+ +  
Sbjct: 487 --VQIPCTHSRLNGYKREMLVGWQNPPQGWVAVNTDGALRRNTNMAAAGGVFRDCNEYWL 544

Query: 178 GCFTLHLGTGFAFLAELQGAITACEIALDKGWQFIWLEAD 59
           G F   LG  +++ AEL G + +  I  +KG+  IWL+ D
Sbjct: 545 GGFAAKLGKCYSYRAELWGVLHSLRIVKEKGFSKIWLQVD 584