BLASTX nr result
ID: Rehmannia25_contig00002942
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00002942
(1288 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOX98333.1| DNA-directed RNA polymerase family protein [Theob... 525 e-146
ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerase II su... 525 e-146
emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera] 523 e-146
ref|XP_006348609.1| PREDICTED: DNA-directed RNA polymerases II, ... 523 e-146
ref|XP_004238992.1| PREDICTED: DNA-directed RNA polymerase II su... 521 e-145
ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, puta... 518 e-144
ref|XP_006422955.1| hypothetical protein CICLE_v10028849mg [Citr... 517 e-144
ref|XP_004505300.1| PREDICTED: DNA-directed RNA polymerase II su... 509 e-142
ref|XP_002313865.2| DNA-directed RNA polymerase II 36 kDa polype... 508 e-141
gb|EMJ03015.1| hypothetical protein PRUPE_ppa008812mg [Prunus pe... 503 e-140
ref|XP_004304034.1| PREDICTED: DNA-directed RNA polymerase II su... 500 e-139
ref|XP_004138895.1| PREDICTED: DNA-directed RNA polymerase II su... 498 e-138
ref|XP_003529425.1| PREDICTED: DNA-directed RNA polymerases II, ... 498 e-138
ref|XP_003556247.1| PREDICTED: DNA-directed RNA polymerases II, ... 498 e-138
ref|XP_003607895.1| DNA-directed RNA polymerase II subunit RPB3-... 496 e-138
gb|ESW29765.1| hypothetical protein PHAVU_002G097400g [Phaseolus... 491 e-136
gb|AFK41039.1| unknown [Medicago truncatula] 491 e-136
ref|XP_002883895.1| RBP36A [Arabidopsis lyrata subsp. lyrata] gi... 488 e-135
ref|XP_006393120.1| hypothetical protein EUTSA_v10011661mg [Eutr... 487 e-135
ref|XP_006409557.1| hypothetical protein EUTSA_v10022739mg [Eutr... 487 e-135
>gb|EOX98333.1| DNA-directed RNA polymerase family protein [Theobroma cacao]
Length = 318
Score = 525 bits (1351), Expect = e-146
Identities = 266/314 (84%), Positives = 286/314 (91%)
Frame = -3
Query: 1229 YQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSSVLNDE 1050
YQRFPK+KIR ++DD+ KFELR+TDAS+ANALRRVMIAEVPTIAIDLVEIEVNSSVLNDE
Sbjct: 6 YQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDE 65
Query: 1049 FIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVTSKDL 870
FIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEFHLRAKC+ DQTLDVTSKDL
Sbjct: 66 FIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDQTLDVTSKDL 125
Query: 869 YSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKWSPAAT 690
YSSDHTVVPVDF DS+ G D+++ RGIIIVKLRRGQEL LRAIARKGIGKDHAKWSPAAT
Sbjct: 126 YSSDHTVVPVDFTDSA-GYDSSEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAAT 184
Query: 689 VTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVFDINANTQQVYIYDAEAYTYDDEVL 510
VTFMYEPEI+IN FVESSPT+VFDI+ NTQQV + D EAYTYDDEVL
Sbjct: 185 VTFMYEPEIHINEDMMETLTLEEKQSFVESSPTRVFDIDPNTQQVVVVDPEAYTYDDEVL 244
Query: 509 KKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSADTVEA 330
KKAEAMGKPGLVEI+AKEDSFIFTVE+TGAIKASQL LNAIEVLKQKLDAVRLS DTVEA
Sbjct: 245 KKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEVLKQKLDAVRLSEDTVEA 304
Query: 329 DEQFGELGAHMRGG 288
D+QFGELGAHMRGG
Sbjct: 305 DDQFGELGAHMRGG 318
>ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A [Vitis
vinifera]
Length = 318
Score = 525 bits (1351), Expect = e-146
Identities = 268/314 (85%), Positives = 287/314 (91%)
Frame = -3
Query: 1229 YQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSSVLNDE 1050
YQRFPKIKIR V+DD+ KFELRETDAS+ANALRRVMIAEVPT+AIDLVEIEVNSSVLNDE
Sbjct: 6 YQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSSVLNDE 65
Query: 1049 FIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVTSKDL 870
FIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCE+CSVEFHLRAKC+ D+TLDVTSKDL
Sbjct: 66 FIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDETLDVTSKDL 125
Query: 869 YSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKWSPAAT 690
SSDHTVVPVDF DSS G D+AD +GIIIVKLRRGQEL LRAIARKGIGKDHAKWSPAAT
Sbjct: 126 ISSDHTVVPVDFSDSS-GYDSADKKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAAT 184
Query: 689 VTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVFDINANTQQVYIYDAEAYTYDDEVL 510
VTFMYEPEI+IN +VESSPTKVFDI+A++QQV + DAEAYTYDDEVL
Sbjct: 185 VTFMYEPEIHINEDLMESLTLEEKTSWVESSPTKVFDIDASSQQVVVADAEAYTYDDEVL 244
Query: 509 KKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSADTVEA 330
KKAEAMGKPGLVEI+AKEDSFIFTVE+TGAIKASQL LNAI+VLKQKLDAVRLS DTVEA
Sbjct: 245 KKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVLKQKLDAVRLSEDTVEA 304
Query: 329 DEQFGELGAHMRGG 288
D+QFGELGAHMRGG
Sbjct: 305 DDQFGELGAHMRGG 318
>emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]
Length = 318
Score = 523 bits (1348), Expect = e-146
Identities = 267/314 (85%), Positives = 287/314 (91%)
Frame = -3
Query: 1229 YQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSSVLNDE 1050
YQRFPKIKIR V+DD+ KFELRETDAS+ANALRRVMIAEVPT+AIDLVEIEVNSSVLNDE
Sbjct: 6 YQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSSVLNDE 65
Query: 1049 FIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVTSKDL 870
FIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEFHLRAKC+ D+TLDVTSKDL
Sbjct: 66 FIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDETLDVTSKDL 125
Query: 869 YSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKWSPAAT 690
SSDHTVVPVDF DSS G D+AD +GIIIVKLRRGQEL LRAIARKGIGKDHAKWSPAAT
Sbjct: 126 ISSDHTVVPVDFSDSS-GYDSADKKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAAT 184
Query: 689 VTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVFDINANTQQVYIYDAEAYTYDDEVL 510
VTFMYEPEI+IN +VESSPTKVFDI+A++QQV + DAEAYTYDDEVL
Sbjct: 185 VTFMYEPEIHINEDLMESLTLEEKTSWVESSPTKVFDIDASSQQVVVADAEAYTYDDEVL 244
Query: 509 KKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSADTVEA 330
KKAEAMGKPGLVEI+AKEDSFIFTVE+TGAIKASQL LNAI+VLKQKLDAVRLS DTVEA
Sbjct: 245 KKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVLKQKLDAVRLSEDTVEA 304
Query: 329 DEQFGELGAHMRGG 288
D+QFGELGAHMRGG
Sbjct: 305 DDQFGELGAHMRGG 318
>ref|XP_006348609.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
[Solanum tuberosum]
Length = 319
Score = 523 bits (1347), Expect = e-146
Identities = 264/314 (84%), Positives = 282/314 (89%)
Frame = -3
Query: 1229 YQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSSVLNDE 1050
YQRFPKIKIR V+DDFMKFELRETDASIANALRR+MIAEVPTIAIDLVEIEVNSSVLNDE
Sbjct: 6 YQRFPKIKIREVKDDFMKFELRETDASIANALRRIMIAEVPTIAIDLVEIEVNSSVLNDE 65
Query: 1049 FIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVTSKDL 870
FI+HRLGL+PLTSERAM+MRFSRDCDACDGDGQCEYCSVEF+LR KC++DQTLDVTSKDL
Sbjct: 66 FISHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFYLRVKCLSDQTLDVTSKDL 125
Query: 869 YSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKWSPAAT 690
SSDHTVVPVD+ D+S+ DN N+GIIIVKLRRGQEL LRAIARKGIGKDHAKWSPAAT
Sbjct: 126 LSSDHTVVPVDYSDTSSSFDNTPNKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAAT 185
Query: 689 VTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVFDINANTQQVYIYDAEAYTYDDEVL 510
VTFMYEPEIYIN E VESSPTKVF I+ +QV + D EAYTYDDEVL
Sbjct: 186 VTFMYEPEIYINEDMMESLTLEEKTELVESSPTKVFGIDPENKQVIVVDPEAYTYDDEVL 245
Query: 509 KKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSADTVEA 330
KKAEAMGKPG+VEIHAKEDSFIFTVETTGA+KASQL LNAIEVLKQKLDAVRLS DTVEA
Sbjct: 246 KKAEAMGKPGVVEIHAKEDSFIFTVETTGAVKASQLVLNAIEVLKQKLDAVRLSDDTVEA 305
Query: 329 DEQFGELGAHMRGG 288
D+QFGELGAHMRGG
Sbjct: 306 DDQFGELGAHMRGG 319
>ref|XP_004238992.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like
[Solanum lycopersicum]
Length = 319
Score = 521 bits (1343), Expect = e-145
Identities = 262/314 (83%), Positives = 282/314 (89%)
Frame = -3
Query: 1229 YQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSSVLNDE 1050
YQRFPKIK+R V+DDFMKFELR+TDASIANALRR+MIAEVPTIAIDLVEIEVNSSVLNDE
Sbjct: 6 YQRFPKIKVREVKDDFMKFELRDTDASIANALRRIMIAEVPTIAIDLVEIEVNSSVLNDE 65
Query: 1049 FIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVTSKDL 870
FI+HRLGL+PLTSERAM+MRFSRDCDACDGDGQCEYCSVEF+LR KC++DQTLDVTSKDL
Sbjct: 66 FISHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFYLRVKCLSDQTLDVTSKDL 125
Query: 869 YSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKWSPAAT 690
SSDHTVVPVD+ D+S+ DN N+GIIIVKLRRGQEL LRAIARKGIGKDHAKWSPAAT
Sbjct: 126 LSSDHTVVPVDYSDASSSFDNTPNKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAAT 185
Query: 689 VTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVFDINANTQQVYIYDAEAYTYDDEVL 510
VTFMYEPEIYIN E VESSPTKVF I+ +QV + D EAYTYDDEVL
Sbjct: 186 VTFMYEPEIYINEDMMESLTLEEKTELVESSPTKVFGIDPENKQVIVVDPEAYTYDDEVL 245
Query: 509 KKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSADTVEA 330
KKAEAMGKPG+VEIHAKEDSFIFTVETTGA+KASQL LNAIEVLKQKLDAVRLS DTVEA
Sbjct: 246 KKAEAMGKPGVVEIHAKEDSFIFTVETTGAVKASQLVLNAIEVLKQKLDAVRLSDDTVEA 305
Query: 329 DEQFGELGAHMRGG 288
D+QFGELGAHMRGG
Sbjct: 306 DDQFGELGAHMRGG 319
>ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
gi|223542081|gb|EEF43625.1| DNA-directed RNA polymerase
II subunit, putative [Ricinus communis]
Length = 318
Score = 518 bits (1333), Expect = e-144
Identities = 261/314 (83%), Positives = 284/314 (90%)
Frame = -3
Query: 1229 YQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSSVLNDE 1050
YQRFP+IKIR ++DD+ KFELR+TDAS+ANALRRVMIAEVPT+AIDLVEIEVNSSVLNDE
Sbjct: 6 YQRFPRIKIRELKDDYCKFELRDTDASMANALRRVMIAEVPTVAIDLVEIEVNSSVLNDE 65
Query: 1049 FIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVTSKDL 870
FIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQC+YCSVEFHLRAKCI DQTLDVTSKDL
Sbjct: 66 FIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCDYCSVEFHLRAKCITDQTLDVTSKDL 125
Query: 869 YSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKWSPAAT 690
YSSDHTVVPVDF DSS G D+++ RGIIIVKLRRGQEL LRAIARKGIGKDHAKWSPAAT
Sbjct: 126 YSSDHTVVPVDFSDSS-GYDSSEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAAT 184
Query: 689 VTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVFDINANTQQVYIYDAEAYTYDDEVL 510
VTFMYEP+I+IN +VESSPTKVFDI+ NTQQV + D EAYTYD+EV+
Sbjct: 185 VTFMYEPDIHINEDLMESLSLEEKQSWVESSPTKVFDIDPNTQQVVVVDPEAYTYDEEVI 244
Query: 509 KKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSADTVEA 330
KKAE+MGKPGLV I AKEDSFIFTVE+TGAIKASQL LNAIE+LKQKLDAVRLS DTVEA
Sbjct: 245 KKAESMGKPGLVNIQAKEDSFIFTVESTGAIKASQLVLNAIEILKQKLDAVRLSEDTVEA 304
Query: 329 DEQFGELGAHMRGG 288
D+QFGELGAHMRGG
Sbjct: 305 DDQFGELGAHMRGG 318
>ref|XP_006422955.1| hypothetical protein CICLE_v10028849mg [Citrus clementina]
gi|568867393|ref|XP_006487022.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 3-like [Citrus
sinensis] gi|557524889|gb|ESR36195.1| hypothetical
protein CICLE_v10028849mg [Citrus clementina]
Length = 319
Score = 517 bits (1331), Expect = e-144
Identities = 265/315 (84%), Positives = 285/315 (90%), Gaps = 1/315 (0%)
Frame = -3
Query: 1229 YQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSSVLNDE 1050
YQRFPK+KIR ++DD+ KFELR+TDAS+ANALRRVMIAEVPTIAIDLVEIEVNSSVLNDE
Sbjct: 6 YQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDE 65
Query: 1049 FIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVTSKDL 870
FIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEFHLRAKC +DQTLDVTSKDL
Sbjct: 66 FIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTSKDL 125
Query: 869 YSSDHTVVPVDFPDSSTGLDNAD-NRGIIIVKLRRGQELGLRAIARKGIGKDHAKWSPAA 693
YSSDH+VVPVDF D + G D+ D RGIIIVKLRRGQEL LRAIARKGIGKDHAKWSPAA
Sbjct: 126 YSSDHSVVPVDFVDPA-GYDSTDQQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAA 184
Query: 692 TVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVFDINANTQQVYIYDAEAYTYDDEV 513
TVTFMYEPEI+IN +VESSPTKVFDI+ NT QVY+ DAEAYTYDDEV
Sbjct: 185 TVTFMYEPEIHINEDLMESLSLEEKQSWVESSPTKVFDIDPNTGQVYVVDAEAYTYDDEV 244
Query: 512 LKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSADTVE 333
+KKAEAMGKPGLVEI+AKEDSFIFTVE+TGAIKASQL LNAIEVLKQKLDAVRLS DTVE
Sbjct: 245 IKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEVLKQKLDAVRLSEDTVE 304
Query: 332 ADEQFGELGAHMRGG 288
AD+QFGELGAHMRGG
Sbjct: 305 ADDQFGELGAHMRGG 319
>ref|XP_004505300.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like [Cicer
arietinum]
Length = 319
Score = 509 bits (1311), Expect = e-142
Identities = 255/314 (81%), Positives = 281/314 (89%)
Frame = -3
Query: 1229 YQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSSVLNDE 1050
Y R P++KIR ++DD+MKFELR+TDAS+ANALRRVMI+EVPTIAIDLVEIEVNSSVLNDE
Sbjct: 6 YARMPRVKIRELKDDYMKFELRDTDASVANALRRVMISEVPTIAIDLVEIEVNSSVLNDE 65
Query: 1049 FIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVTSKDL 870
FIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLR KCI DQTLDVTSKDL
Sbjct: 66 FIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRVKCITDQTLDVTSKDL 125
Query: 869 YSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKWSPAAT 690
YSSDHTVVPVDF + L+++D RGIIIVKLRRGQEL LRAIARKGIGKDHAKWSPAAT
Sbjct: 126 YSSDHTVVPVDFSADPSSLESSDGRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAAT 185
Query: 689 VTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVFDINANTQQVYIYDAEAYTYDDEVL 510
VTFMYEP+I+IN E+V+SSPT+VFDI+ TQQV + D EAY+YDDEV+
Sbjct: 186 VTFMYEPDIHINEDLMESLTLEEKREWVDSSPTRVFDIDPVTQQVMVVDPEAYSYDDEVI 245
Query: 509 KKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSADTVEA 330
KKAEAMGKPGLVEI AK+DSFIFTVE+TGA+KASQL LNAIE+LKQKLDAVRLS DTVEA
Sbjct: 246 KKAEAMGKPGLVEITAKQDSFIFTVESTGAVKASQLLLNAIEILKQKLDAVRLSEDTVEA 305
Query: 329 DEQFGELGAHMRGG 288
D+QFGELGAHMRGG
Sbjct: 306 DDQFGELGAHMRGG 319
>ref|XP_002313865.2| DNA-directed RNA polymerase II 36 kDa polypeptide B family protein
[Populus trichocarpa] gi|550331423|gb|EEE87820.2|
DNA-directed RNA polymerase II 36 kDa polypeptide B
family protein [Populus trichocarpa]
Length = 323
Score = 508 bits (1307), Expect = e-141
Identities = 259/318 (81%), Positives = 278/318 (87%), Gaps = 4/318 (1%)
Frame = -3
Query: 1229 YQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSSVLNDE 1050
YQRFPKIKIR ++DD++KFELRETDAS+ANALRRVMIAEVPTIAIDLVEIEVNSSVLNDE
Sbjct: 6 YQRFPKIKIREMKDDYLKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDE 65
Query: 1049 FIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVTSKDL 870
FIAHRLGLIPLTSERAM MRFSRDCDACDGDGQCEYCSVEFHLRAKCI DQTLDVTSKDL
Sbjct: 66 FIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDVTSKDL 125
Query: 869 YSSDHTVVPVDFPDSSTGLDNADN----RGIIIVKLRRGQELGLRAIARKGIGKDHAKWS 702
YSSDH V+PVDF D S D D+ RGIIIVKLRRGQEL LRAIARKGIGKDHAKWS
Sbjct: 126 YSSDHAVIPVDFSDPSDANDPFDHTETQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWS 185
Query: 701 PAATVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVFDINANTQQVYIYDAEAYTYD 522
PAATVTFMYEPEI+IN ++ESSPTKVFDI+ TQQV + D EAYTYD
Sbjct: 186 PAATVTFMYEPEIHINEDLMETLTLEEKLSWIESSPTKVFDIDKVTQQVVVVDPEAYTYD 245
Query: 521 DEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSAD 342
DEV+KKAEAMGK GL++I AKEDSFIFTVE+TGA+KASQL LNAIE+LKQKLDAVRLS D
Sbjct: 246 DEVIKKAEAMGKRGLIDIRAKEDSFIFTVESTGAVKASQLVLNAIEILKQKLDAVRLSDD 305
Query: 341 TVEADEQFGELGAHMRGG 288
TVEAD+QFGELG HMRGG
Sbjct: 306 TVEADDQFGELGVHMRGG 323
>gb|EMJ03015.1| hypothetical protein PRUPE_ppa008812mg [Prunus persica]
Length = 318
Score = 503 bits (1296), Expect = e-140
Identities = 251/314 (79%), Positives = 282/314 (89%)
Frame = -3
Query: 1229 YQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSSVLNDE 1050
YQR P++KIR +RDD+MKFELR+TDAS+ANALRRVMIAEVPT+AIDLVEIE+NSSVLNDE
Sbjct: 6 YQRLPRVKIREMRDDYMKFELRDTDASVANALRRVMIAEVPTVAIDLVEIEINSSVLNDE 65
Query: 1049 FIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVTSKDL 870
FIAHRLGLIPLTS+RAM+MRFSRDCDACDGDGQCE+CSVEFHLRAKC +DQTLDVTSKDL
Sbjct: 66 FIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTSKDL 125
Query: 869 YSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKWSPAAT 690
SSDHTVVPVDF DS+ G+++++ +GIIIVKLRRGQEL LRAIARKGIGKDHAKWSPAAT
Sbjct: 126 LSSDHTVVPVDFSDSA-GMESSEQKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAAT 184
Query: 689 VTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVFDINANTQQVYIYDAEAYTYDDEVL 510
VTFMYEP+I IN +VESSPTKVFD + T++V + D EAYTYDDEV+
Sbjct: 185 VTFMYEPDIRINEELMDMLTLDEKKAWVESSPTKVFDFDPKTEKVMVVDPEAYTYDDEVI 244
Query: 509 KKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSADTVEA 330
KKAEAMGKPGLV+I AKEDSFIFTVE+TGA+KASQL LNAIE+LKQKLDAVRLS DTVEA
Sbjct: 245 KKAEAMGKPGLVDIIAKEDSFIFTVESTGAVKASQLLLNAIEILKQKLDAVRLSEDTVEA 304
Query: 329 DEQFGELGAHMRGG 288
D+QFGELGAHMRGG
Sbjct: 305 DDQFGELGAHMRGG 318
>ref|XP_004304034.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like
[Fragaria vesca subsp. vesca]
Length = 318
Score = 500 bits (1287), Expect = e-139
Identities = 251/314 (79%), Positives = 281/314 (89%)
Frame = -3
Query: 1229 YQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSSVLNDE 1050
YQRFP++KIR +R D++KFELR+TDAS+ANALRRVMIAEVPT+AIDLVEIE+NSSVLNDE
Sbjct: 6 YQRFPRVKIREMRHDYLKFELRDTDASVANALRRVMIAEVPTVAIDLVEIEINSSVLNDE 65
Query: 1049 FIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVTSKDL 870
FIAHRLGLIPLTS+RAM+MRFSRDCDACDGDGQCEYCSVEFHLRA+C +DQTLDVTSK+L
Sbjct: 66 FIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEYCSVEFHLRARCHSDQTLDVTSKEL 125
Query: 869 YSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKWSPAAT 690
SSDHTVVPVDF D+S G + ++ RGIIIVKLRRGQEL LRAIARKGIGKDHAKWSPAAT
Sbjct: 126 LSSDHTVVPVDFSDAS-GYEASEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAAT 184
Query: 689 VTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVFDINANTQQVYIYDAEAYTYDDEVL 510
VTFMYEP+I IN +V+SSPTKVF+I+ NT +V + D EAYTYDDEV+
Sbjct: 185 VTFMYEPDIRINEEMMDTLSLEDKAAWVDSSPTKVFEIDPNTGKVVVVDPEAYTYDDEVI 244
Query: 509 KKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSADTVEA 330
KKAEAMGKPGLV+I AKEDSFIFTVE+TGAIKASQL LNAIE+LKQKLDAVRLS DTVEA
Sbjct: 245 KKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLLLNAIEILKQKLDAVRLSEDTVEA 304
Query: 329 DEQFGELGAHMRGG 288
D+QFGELGAHMRGG
Sbjct: 305 DDQFGELGAHMRGG 318
>ref|XP_004138895.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like
[Cucumis sativus]
Length = 320
Score = 498 bits (1283), Expect = e-138
Identities = 253/315 (80%), Positives = 277/315 (87%), Gaps = 1/315 (0%)
Frame = -3
Query: 1229 YQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSSVLNDE 1050
YQRFPK+KIR +RDD+ KFELR+TDAS+ANALRRVMIAEVPTIAIDLVEIEVNSSVLNDE
Sbjct: 6 YQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDE 65
Query: 1049 FIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVTSKDL 870
FIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEFHLRAKC +DQTLDVTSKDL
Sbjct: 66 FIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTSKDL 125
Query: 869 YSSDHTVVPVDFPDSSTGLDNA-DNRGIIIVKLRRGQELGLRAIARKGIGKDHAKWSPAA 693
YSSDHTVVPVDF DS+ A D +GIIIVKLRRGQEL LRAIARKGIGKDHAKWSPAA
Sbjct: 126 YSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAA 185
Query: 692 TVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVFDINANTQQVYIYDAEAYTYDDEV 513
TVTFMYEP I+IN +VES PT+VF+++ T QV + D EAYTYDDEV
Sbjct: 186 TVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDTVTHQVMVVDPEAYTYDDEV 245
Query: 512 LKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSADTVE 333
+KKAEAMGK GLV+I A+EDSFIFTVE+TGAIKASQL LNAI++LKQKLDAVRLS DTVE
Sbjct: 246 IKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLSDDTVE 305
Query: 332 ADEQFGELGAHMRGG 288
AD+QFGELGAHMRGG
Sbjct: 306 ADDQFGELGAHMRGG 320
>ref|XP_003529425.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
[Glycine max]
Length = 319
Score = 498 bits (1283), Expect = e-138
Identities = 254/314 (80%), Positives = 279/314 (88%)
Frame = -3
Query: 1229 YQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSSVLNDE 1050
Y R P++KIR ++DD+ KFELR+TDASIANALRRVMIAEVPT+AIDLVEIEVNSSVLNDE
Sbjct: 7 YARMPRVKIRELKDDYAKFELRDTDASIANALRRVMIAEVPTVAIDLVEIEVNSSVLNDE 66
Query: 1049 FIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVTSKDL 870
FIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEFHLR KC+ DQTLDVTSKDL
Sbjct: 67 FIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRVKCMTDQTLDVTSKDL 126
Query: 869 YSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKWSPAAT 690
YSSD TV PVDF D S D+ +NRGIIIVKLRRGQEL LRAIARKGIGKDHAKWSPAAT
Sbjct: 127 YSSDPTVSPVDFSDPSA-TDSDNNRGIIIVKLRRGQELKLRAIARKGIGKDHAKWSPAAT 185
Query: 689 VTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVFDINANTQQVYIYDAEAYTYDDEVL 510
VTFMYEPEI+IN E+V+SSPT+VF+I+ TQQV + DAEAYTYDDEVL
Sbjct: 186 VTFMYEPEIHINEDLMETLTLEEKREWVDSSPTRVFEIDPVTQQVMVVDAEAYTYDDEVL 245
Query: 509 KKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSADTVEA 330
KKAEAMGKPGLVEI A++DSFIFTVE+TGA+KASQL LNAIE+LKQKLDAVRLS DTVEA
Sbjct: 246 KKAEAMGKPGLVEIIARQDSFIFTVESTGAVKASQLVLNAIEILKQKLDAVRLSEDTVEA 305
Query: 329 DEQFGELGAHMRGG 288
D+QFGELGAHMRGG
Sbjct: 306 DDQFGELGAHMRGG 319
>ref|XP_003556247.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
[Glycine max]
Length = 320
Score = 498 bits (1281), Expect = e-138
Identities = 253/314 (80%), Positives = 277/314 (88%)
Frame = -3
Query: 1229 YQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSSVLNDE 1050
Y R P++KIR ++DD+ KFELR+TDASIANALRRVMIAEVPT+AIDLVEIEVNSSVLNDE
Sbjct: 7 YARMPRVKIRELKDDYAKFELRDTDASIANALRRVMIAEVPTVAIDLVEIEVNSSVLNDE 66
Query: 1049 FIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVTSKDL 870
FIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEFHLR KC+ DQTLDVTSKDL
Sbjct: 67 FIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRVKCMTDQTLDVTSKDL 126
Query: 869 YSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKWSPAAT 690
YSSD TV PVDF D S +NRGIIIVKLRRGQEL LRAIARKGIGKDHAKWSPAAT
Sbjct: 127 YSSDPTVSPVDFSDPSATDSPDNNRGIIIVKLRRGQELKLRAIARKGIGKDHAKWSPAAT 186
Query: 689 VTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVFDINANTQQVYIYDAEAYTYDDEVL 510
VTFMYEPEI+IN E+V+SSPT+VF+I+ TQQV + DAEAYTYDDEVL
Sbjct: 187 VTFMYEPEIHINEDLMETLTLEEKREWVDSSPTRVFEIDPVTQQVMVVDAEAYTYDDEVL 246
Query: 509 KKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSADTVEA 330
KKAEAMGKPGLVEI A++DSFIFTVE+TGA+KASQL LNAIE+LKQKLDAVRLS DTVEA
Sbjct: 247 KKAEAMGKPGLVEIIARQDSFIFTVESTGAVKASQLVLNAIEILKQKLDAVRLSEDTVEA 306
Query: 329 DEQFGELGAHMRGG 288
D+QFGELGAHMRGG
Sbjct: 307 DDQFGELGAHMRGG 320
>ref|XP_003607895.1| DNA-directed RNA polymerase II subunit RPB3-A [Medicago truncatula]
gi|85719360|gb|ABC75365.1| RNA polymerase, dimerisation
[Medicago truncatula] gi|355508950|gb|AES90092.1|
DNA-directed RNA polymerase II subunit RPB3-A [Medicago
truncatula]
Length = 318
Score = 496 bits (1277), Expect = e-138
Identities = 248/314 (78%), Positives = 277/314 (88%)
Frame = -3
Query: 1229 YQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSSVLNDE 1050
Y R P++KIR ++DD+MKFELR+TDAS+ANALRRVMI+EVPT+AIDLVEIEVNSSVLNDE
Sbjct: 6 YARMPRVKIRELKDDYMKFELRDTDASVANALRRVMISEVPTVAIDLVEIEVNSSVLNDE 65
Query: 1049 FIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVTSKDL 870
FIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLR KCI DQTLDV+SKDL
Sbjct: 66 FIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRVKCITDQTLDVSSKDL 125
Query: 869 YSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKWSPAAT 690
SSDHTV PVD P +++ D RGIIIVKLRRGQEL LRAIARKGIGKDHAKWSPAAT
Sbjct: 126 ISSDHTVTPVDVPGGDASIES-DGRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAAT 184
Query: 689 VTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVFDINANTQQVYIYDAEAYTYDDEVL 510
VTFMYEP+I+IN E+V+SSPT+VFDI+ TQQV + D EAY+YDDEV+
Sbjct: 185 VTFMYEPDIHINEDLMESLTLEEKKEWVDSSPTRVFDIDPVTQQVMVVDPEAYSYDDEVI 244
Query: 509 KKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSADTVEA 330
KKAEAMGKPGL+EI AK+DSFIFTVE+TGA+KASQL LN+IE+LKQKLDAVRLS DTVEA
Sbjct: 245 KKAEAMGKPGLIEITAKQDSFIFTVESTGAVKASQLLLNSIEILKQKLDAVRLSEDTVEA 304
Query: 329 DEQFGELGAHMRGG 288
D+QFGELGAHMRGG
Sbjct: 305 DDQFGELGAHMRGG 318
>gb|ESW29765.1| hypothetical protein PHAVU_002G097400g [Phaseolus vulgaris]
Length = 318
Score = 491 bits (1265), Expect = e-136
Identities = 247/314 (78%), Positives = 282/314 (89%)
Frame = -3
Query: 1229 YQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSSVLNDE 1050
Y R P++KIR ++DD+ KFELR+TDASIANALRRVMIAEVPTIAIDLVEIEVNSSVLNDE
Sbjct: 6 YARMPRVKIRELKDDYAKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSSVLNDE 65
Query: 1049 FIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVTSKDL 870
FIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEFHLR KC+ DQTLDV+SKDL
Sbjct: 66 FIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRVKCMTDQTLDVSSKDL 125
Query: 869 YSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKWSPAAT 690
YSSD +VVPVDF D ++ D++++RG+IIVKLRRGQEL LRAIARKGIGKDHAKWSPAAT
Sbjct: 126 YSSDPSVVPVDFSDPAS-TDSSESRGVIIVKLRRGQELRLRAIARKGIGKDHAKWSPAAT 184
Query: 689 VTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVFDINANTQQVYIYDAEAYTYDDEVL 510
VTFMYEPEI++N E+V+SSPT+VF+I+ TQQV + D+EAY+YDDEV+
Sbjct: 185 VTFMYEPEIHLNEDLMETLTLEEKREWVDSSPTRVFEIDPVTQQVMVVDSEAYSYDDEVI 244
Query: 509 KKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSADTVEA 330
KKAEAMGKPGLVEI A++DSFIFTVE+TGAIK+SQL LNAIE+LKQKLDAVRLS DTVEA
Sbjct: 245 KKAEAMGKPGLVEIIARQDSFIFTVESTGAIKSSQLVLNAIEILKQKLDAVRLSEDTVEA 304
Query: 329 DEQFGELGAHMRGG 288
D+QFGELGAHMRGG
Sbjct: 305 DDQFGELGAHMRGG 318
>gb|AFK41039.1| unknown [Medicago truncatula]
Length = 318
Score = 491 bits (1265), Expect = e-136
Identities = 247/314 (78%), Positives = 276/314 (87%)
Frame = -3
Query: 1229 YQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSSVLNDE 1050
Y R P++KIR ++DD+MKFELR+TDAS+ANALRRVMI+EVPT+AIDLVEIEVNSSVLNDE
Sbjct: 6 YARMPRVKIRELKDDYMKFELRDTDASVANALRRVMISEVPTVAIDLVEIEVNSSVLNDE 65
Query: 1049 FIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVTSKDL 870
FIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLR K I DQTLDV+SKDL
Sbjct: 66 FIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRVKRITDQTLDVSSKDL 125
Query: 869 YSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKWSPAAT 690
SSDHTV PVD P +++ D RGIIIVKLRRGQEL LRAIARKGIGKDHAKWSPAAT
Sbjct: 126 ISSDHTVTPVDVPGGDASIES-DGRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAAT 184
Query: 689 VTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVFDINANTQQVYIYDAEAYTYDDEVL 510
VTFMYEP+I+IN E+V+SSPT+VFDI+ TQQV + D EAY+YDDEV+
Sbjct: 185 VTFMYEPDIHINEDLMESLTLEEKKEWVDSSPTRVFDIDPVTQQVMVVDPEAYSYDDEVI 244
Query: 509 KKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSADTVEA 330
KKAEAMGKPGL+EI AK+DSFIFTVE+TGA+KASQL LN+IE+LKQKLDAVRLS DTVEA
Sbjct: 245 KKAEAMGKPGLIEITAKQDSFIFTVESTGAVKASQLLLNSIEILKQKLDAVRLSEDTVEA 304
Query: 329 DEQFGELGAHMRGG 288
D+QFGELGAHMRGG
Sbjct: 305 DDQFGELGAHMRGG 318
>ref|XP_002883895.1| RBP36A [Arabidopsis lyrata subsp. lyrata] gi|297329735|gb|EFH60154.1|
RBP36A [Arabidopsis lyrata subsp. lyrata]
Length = 319
Score = 488 bits (1257), Expect = e-135
Identities = 243/314 (77%), Positives = 274/314 (87%)
Frame = -3
Query: 1229 YQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSSVLNDE 1050
YQRFPKI IR ++DD+ KFELRETD S+ANALRRVMI+EVPT+AIDLVEIEVNSSVLNDE
Sbjct: 6 YQRFPKITIRELKDDYAKFELRETDVSMANALRRVMISEVPTVAIDLVEIEVNSSVLNDE 65
Query: 1049 FIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVTSKDL 870
FIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEF L AKC+ DQTLDVTS+DL
Sbjct: 66 FIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFRLSAKCVTDQTLDVTSRDL 125
Query: 869 YSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKWSPAAT 690
YS+D TV PVDF S+ D+++ +GIIIVKLRRGQEL LRAIARKGIGKDHAKWSPAAT
Sbjct: 126 YSADPTVTPVDFTIDSSASDSSEQKGIIIVKLRRGQELKLRAIARKGIGKDHAKWSPAAT 185
Query: 689 VTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVFDINANTQQVYIYDAEAYTYDDEVL 510
VTFMYEP+I IN + +ESSPTKVF I+ T+QV + D EAYTYD+EV+
Sbjct: 186 VTFMYEPDIIINEDMMDTLSDEEKIDLIESSPTKVFGIDPVTRQVVVVDPEAYTYDEEVI 245
Query: 509 KKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSADTVEA 330
KKAEAMGKPGL+EIH K+DSFIFTVE+TGA+KASQL LNAI++LKQKLDAVRLS DTVEA
Sbjct: 246 KKAEAMGKPGLIEIHPKDDSFIFTVESTGAVKASQLVLNAIDILKQKLDAVRLSDDTVEA 305
Query: 329 DEQFGELGAHMRGG 288
D+QFGELGAHMRGG
Sbjct: 306 DDQFGELGAHMRGG 319
>ref|XP_006393120.1| hypothetical protein EUTSA_v10011661mg [Eutrema salsugineum]
gi|557089698|gb|ESQ30406.1| hypothetical protein
EUTSA_v10011661mg [Eutrema salsugineum]
Length = 320
Score = 487 bits (1254), Expect = e-135
Identities = 241/314 (76%), Positives = 273/314 (86%)
Frame = -3
Query: 1229 YQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSSVLNDE 1050
YQRFPK+KIR ++DD+ KFELRETD S+ANALRRVMI+EVPT+AIDLVEI +NSSVLNDE
Sbjct: 7 YQRFPKVKIRELKDDYAKFELRETDVSMANALRRVMISEVPTVAIDLVEIMINSSVLNDE 66
Query: 1049 FIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVTSKDL 870
FIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEF L AKC+ DQTLDVTS+DL
Sbjct: 67 FIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFQLGAKCVTDQTLDVTSRDL 126
Query: 869 YSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKWSPAAT 690
YS+D TV PVDF + D+++ RGIIIVKLRRGQEL LRAIARKGIGKDHAKWSPAAT
Sbjct: 127 YSADPTVTPVDFATDPSATDSSEQRGIIIVKLRRGQELKLRAIARKGIGKDHAKWSPAAT 186
Query: 689 VTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVFDINANTQQVYIYDAEAYTYDDEVL 510
VTFMYEP+I IN + +ESSPTKVF I+ T+QV + D EAYTYD+EV+
Sbjct: 187 VTFMYEPDININEDMVDTLTDEEKFDLIESSPTKVFGIDPVTRQVVVVDPEAYTYDEEVI 246
Query: 509 KKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSADTVEA 330
KKAEA+GKPGL+EIH K+DSFIFTVETTGA+KASQL LNAI++LKQKLDAVRLS DTVEA
Sbjct: 247 KKAEALGKPGLIEIHPKDDSFIFTVETTGAVKASQLVLNAIDILKQKLDAVRLSDDTVEA 306
Query: 329 DEQFGELGAHMRGG 288
D+QFGELGAHMRGG
Sbjct: 307 DDQFGELGAHMRGG 320
>ref|XP_006409557.1| hypothetical protein EUTSA_v10022739mg [Eutrema salsugineum]
gi|557110719|gb|ESQ51010.1| hypothetical protein
EUTSA_v10022739mg [Eutrema salsugineum]
Length = 369
Score = 487 bits (1253), Expect = e-135
Identities = 239/314 (76%), Positives = 276/314 (87%)
Frame = -3
Query: 1229 YQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSSVLNDE 1050
YQRFPK+KIR ++DD+ KFELRETD S+ANALRRVMI+EVPT+AIDLVEI++NSSVLNDE
Sbjct: 56 YQRFPKVKIRELKDDYAKFELRETDVSMANALRRVMISEVPTVAIDLVEIDINSSVLNDE 115
Query: 1049 FIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVTSKDL 870
FIAHRLGLIPLTSERAM+MR SRDCD+CDGDGQCE+CSVEF L+AKC+ DQTLDVTS+DL
Sbjct: 116 FIAHRLGLIPLTSERAMSMRLSRDCDSCDGDGQCEFCSVEFRLQAKCVTDQTLDVTSRDL 175
Query: 869 YSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKWSPAAT 690
YS+D TV PVDF S+G D+++ RGIIIVKLRRGQEL LRAIARKGIGKDHAKWSPA+T
Sbjct: 176 YSTDPTVTPVDFTLDSSGTDSSEQRGIIIVKLRRGQELKLRAIARKGIGKDHAKWSPAST 235
Query: 689 VTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVFDINANTQQVYIYDAEAYTYDDEVL 510
VTFMYEP+I IN + +ESSPTKVF I+ T+QV + D EAYTYD+EV+
Sbjct: 236 VTFMYEPDININEDMMDTLTEDEKIDLIESSPTKVFGIDPVTRQVVVVDPEAYTYDEEVI 295
Query: 509 KKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSADTVEA 330
KKAEAMGKPGL+EIH K+DSFIFTVE+TGA+KASQL LNAI++LKQKLDAVRLS DTVEA
Sbjct: 296 KKAEAMGKPGLIEIHPKDDSFIFTVESTGAVKASQLVLNAIDILKQKLDAVRLSDDTVEA 355
Query: 329 DEQFGELGAHMRGG 288
D+QFGELGAH+RGG
Sbjct: 356 DDQFGELGAHLRGG 369