BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00002530
         (1936 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   407   e-111
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664...   405   e-110
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   376   e-101
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]             347   1e-92
ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268...   340   1e-90
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665...   330   2e-87
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298...   330   2e-87
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   321   6e-85
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...   319   2e-84
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]       309   2e-81
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...   309   2e-81
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                306   2e-80
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...   306   3e-80
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]           306   3e-80
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]               303   1e-79
ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663...   301   9e-79
gb|ABD96948.1| hypothetical protein [Cleome spinosa]                  301   9e-79
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,...   298   7e-78
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta...   296   3e-77
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   294   1e-76

>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  407 bits (1046), Expect = e-111
 Identities = 213/557 (38%), Positives = 316/557 (56%), Gaps = 9/557 (1%)
 Frame = -2

Query: 1935 SVLDSLIDEAQAAFVRGRSMIDNIHLMQELLRQYNRKRTTPRCTIKVDLRKAFDSVSWSF 1756
            +V+  ++D AQ  F+  R + DNI L  EL+R YNR+  +PRC IKVD+RKA+DSV W F
Sbjct: 540  AVITEVVDCAQTGFIPERHIGDNILLATELIRGYNRRHVSPRCVIKVDIRKAYDSVEWVF 599

Query: 1755 LRDMLIGLNFPPIFVGWIMECVTTTSYSISINGGLHGIFKGEKGIRQGDPLSPYLFVLCM 1576
            L  ML  L FP +F+ WIM CV T SYSI +NG     F  +KG+RQGDPLSP+LF L M
Sbjct: 600  LESMLKELGFPSMFIRWIMACVKTVSYSILLNGIPSIPFDAQKGLRQGDPLSPFLFALSM 659

Query: 1575 EYFSRLLRMKTTNSHFNYHPKCGLLKITHLVYADDLMLLSRGDPISIRILMDCLKDFGHK 1396
            EY SR +     +  FN+HPKC  +K+THL++ADDL++ +R D  SI  +M     F   
Sbjct: 660  EYLSRCMGNMCKDPEFNFHPKCERIKLTHLMFADDLLMFARADASSISKIMAAFNSFSKA 719

Query: 1395 SGMNMNISKSNIFMAGICESDTRQILDLSQLARGTMPFRYLGIPLAAEKLKVVYYEELVG 1216
            SG+  +I KS I+  G+C  +  Q+ D  Q+  G++PFRYLG+PLA++KL     + L+ 
Sbjct: 720  SGLQASIEKSCIYFGGVCHEEAEQLADRIQMPIGSLPFRYLGVPLASKKLNFSQCKPLID 779

Query: 1215 KIRTYVDGWSANTLSYAGRTELVRSVLQGVECFWLSILPIPAVVRSKIISICRSFLW-GS 1039
            KI T   GW A+ LSYAGR +LV+++L  ++ +W  I P+P  +   + + CR FLW G+
Sbjct: 780  KITTRAQGWVAHLLSYAGRLQLVKTILYSMQNYWGQIFPLPKKLIKAVETTCRKFLWTGT 839

Query: 1038 VNPS----VAWSTLCLPKSEGGLGLRDFQSWNHALLAKTLWNIQGNKDTLWYKWIHQVYL 871
            V+ S    VAW  L  PKS GGL + +   WN A + K LW I   +D LW +W++  Y+
Sbjct: 840  VDTSYKAPVAWDFLQQPKSTGGLNVTNMVLWNKAAILKLLWAITFKQDKLWVRWVNAYYI 899

Query: 870  RGRNIWDWELRRDDSPLFKNLHSIRDIIVQKCGSQERAAQLLASWNA--NHRVKGPNNPY 697
            + +NI +  +  + S + + +   R+++ +  G           W A  NH        Y
Sbjct: 900  KRQNIENVTVSSNTSWILRKIFESRELLTRTGG-----------WEAVSNHMNFSIKKTY 948

Query: 696  NFFRPHQPEVPWSNVIWSSCIMPKHSFHLWLCKQSRIRTRDRI-RW-MDVDKLCVFCGTK 523
               +     V W  +I ++   PK  F LWL   +R+ T +R+ RW  DV  LC  CG +
Sbjct: 949  KLLQEDYENVVWKRLICNNKATPKSQFILWLAMLNRLATAERVSRWNRDVSPLCKMCGNE 1008

Query: 522  PETCQHLYFECAFTRAVWTGIRGWIGIDRQMTTFSSAIKWLKKEAKGTSWHSRGQKIAFA 343
             ET QHL+F C +++ +W  +  ++ +  Q    +     +KK A+ T   ++   + F 
Sbjct: 1009 IETIQHLFFNCIYSKEIWGKVLLYLNLQPQADAQAKKELAIKK-ARSTKDRNKLYVMMFT 1067

Query: 342  TTVYQLWNARNRLIFEG 292
             +VY +W  RN  +F G
Sbjct: 1068 ESVYAIWLLRNAKVFRG 1084


>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
          Length = 939

 Score =  405 bits (1040), Expect = e-110
 Identities = 206/568 (36%), Positives = 323/568 (56%), Gaps = 7/568 (1%)
 Frame = -2

Query: 1917 IDEAQAAFVRGRSMIDNIHLMQELLRQYNRKRTTPRCTIKVDLRKAFDSVSWSFLRDMLI 1738
            + + QAAFV G+ + D++ L  ELLR Y RK  TP+C +++D++KA+D+V W  L  +L 
Sbjct: 371  VGKNQAAFVPGQQLHDHVMLAFELLRGYERKHGTPKCMLQIDIQKAYDTVHWDALEHILR 430

Query: 1737 GLNFPPIFVGWIMECVTTTSYSISINGGLHGIFKGEKGIRQGDPLSPYLFVLCMEYFSRL 1558
             L FP  F+ WIM  V + +Y  +ING      +  +GIRQGDP+SP LF+L MEY +R+
Sbjct: 431  ELGFPDQFIKWIMIAVRSVTYVFNINGRFTRRLEARRGIRQGDPISPLLFILVMEYLNRI 490

Query: 1557 LRMKTTNSHFNYHPKCGLLKITHLVYADDLMLLSRGDPISIRILMDCLKDFGHKSGMNMN 1378
            L       +FNYH KC  +KIT+L +ADDL+L SRGD  S++I++D    F    G+++N
Sbjct: 491  LSQLDKIPNFNYHSKCEKMKITNLCFADDLLLFSRGDIGSVQIMLDKFNTFLRSMGLHVN 550

Query: 1377 ISKSNIFMAGICESDTRQILDLSQLARGTMPFRYLGIPLAAEKLKVVYYEELVGKIRTYV 1198
             SK NI+   +  +   Q+L +S    G MPFRYLGIPL+++KL + +Y+ L+ KI   +
Sbjct: 551  PSKCNIYCGSVDINVKEQLLLISGFKEGKMPFRYLGIPLSSKKLNIKHYQVLIDKIVGRI 610

Query: 1197 DGWSANTLSYAGRTELVRSVLQGVECFWLSILPIPAVVRSKIISICRSFLW-GSVNPS-- 1027
              WSA  LSYAGR +L++SV+     FW+  LP+P  V  +I +ICRSFLW G+ N S  
Sbjct: 611  THWSAGLLSYAGRVQLIQSVIFATINFWMQCLPLPKFVIMRINAICRSFLWIGNSNISRK 670

Query: 1026 --VAWSTLCLPKSEGGLGLRDFQSWNHALLAKTLWNIQGNKDTLWYKWIHQVYLRGRNIW 853
              +AW  +C PK  GGL + +   WN   + K LWN+    D LW KW+H  Y+RG++IW
Sbjct: 671  SPIAWEKVCSPKINGGLNIINLAIWNKISILKLLWNVCNKSDNLWIKWLHTYYIRGQSIW 730

Query: 852  DWELRRDDSPLFKNLHSIRDIIVQKCGSQERAAQLLASWNANHRVKGPNNPYNFFRPHQP 673
               L++  S +  ++  +R +++Q     +   ++                Y        
Sbjct: 731  SMVLKKSHSWIMSSMMKLRPLLLQYQSRMQDVFKM-------------KKIYLALFEESE 777

Query: 672  EVPWSNVIWSSCIMPKHSFHLWLCKQSRIRTRDRI--RWMDVDKLCVFCGTKPETCQHLY 499
            ++ W  ++ ++   P+  F LW     R+ ++DR+    ++VD  C FC +  E+ +HL+
Sbjct: 778  KMSWRTLMCNNLARPRALFCLWQACHFRLASKDRLIKFGLNVDANCAFCSSM-ESHEHLF 836

Query: 498  FECAFTRAVWTGIRGWIGIDRQMTTFSSAIKWLKKEAKGTSWHSRGQKIAFATTVYQLWN 319
            F C   + +WT +  W+ I    +T+S  + W+ ++ KG  W +   K AF  T+Y +W 
Sbjct: 837  FGCIELKTIWTAVLNWLQIIHMPSTWSEELNWITRKCKGKGWRAMLLKCAFTETIYHIWA 896

Query: 318  ARNRLIFEGEVSHIDLVIHKIKTHVYKV 235
             RN  +F G V++  +    I T +Y+V
Sbjct: 897  YRNHRVFGGNVNNRKVEDSIINTIIYRV 924


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  376 bits (965), Expect = e-101
 Identities = 205/568 (36%), Positives = 301/568 (52%), Gaps = 9/568 (1%)
 Frame = -2

Query: 1932 VLDSLIDEAQAAFVRGRSMIDNIHLMQELLRQYNRKRTTPRCTIKVDLRKAFDSVSWSFL 1753
            ++  +++EAQ+ F+ GR + DNI L  EL+R Y RK  +PRC +KVD+RKA+DSV WSFL
Sbjct: 538  IIGEVVNEAQSGFIPGRHIADNILLASELIRGYTRKHMSPRCIMKVDIRKAYDSVEWSFL 597

Query: 1752 RDMLIGLNFPPIFVGWIMECVTTTSYSISINGGLHGIFKGEKGIRQGDPLSPYLFVLCME 1573
              +L    FP  FVGWIMECV+T SYS+ +NG     F+  KG+RQGDP+SP+LF LCME
Sbjct: 598  ETLLYEFGFPSRFVGWIMECVSTVSYSVLVNGIPTQPFQARKGLRQGDPMSPFLFALCME 657

Query: 1572 YFSRLLRMKTTNSHFNYHPKCGLLKITHLVYADDLMLLSRGDPISIRILMDCLKDFGHKS 1393
            Y SR L     +  FN+HPKC  L ITHL++ADDL++  R D  S+  +    + F H S
Sbjct: 658  YLSRCLEELKGSPDFNFHPKCERLNITHLMFADDLLMFCRADKSSLDHMNVAFQKFSHAS 717

Query: 1392 GMNMNISKSNIFMAGICESDTRQILDLSQLARGTMPFRYLGIPLAAEKLKVVYYEELVGK 1213
            G+  +  KSNI+  G+ +   R++ D   +  G +PFRYLG+PL ++KL     + LV  
Sbjct: 718  GLAASHEKSNIYFCGVDDETARELADYVHMQLGELPFRYLGVPLTSKKLTYAQCKPLVEM 777

Query: 1212 IRTYVDGWSANTLSYAGRTELVRSVLQGVECFWLSILPIPAVVRSKIISICRSFLWGSVN 1033
            I      W A  LSYAGR +L++S+L  ++ +W  I P+   V   +  +CR FLW    
Sbjct: 778  ITNRAQTWMAKLLSYAGRLQLIKSILSSMQNYWAHIFPLSKKVIQAVEKVCRKFLWTGKT 837

Query: 1032 PS-----VAWSTLCLPKSEGGLGLRDFQSWNHALLAKTLWNIQGNKDTLWYKWIHQVYLR 868
                   VAW+T+  PKS GG  + + + WN A + K LW I+  +D LW +WIH  Y++
Sbjct: 838  EETKKAPVAWATIQRPKSRGGWNVINMKYWNRAAMLKLLWAIEFKRDKLWVRWIHSYYIK 897

Query: 867  GRNIWDWELRRDDSPLFKNLHSIRDIIVQKCGSQERAAQLLASWNANHRVKGPNNPYNFF 688
             ++I    +    + + + +   RD +       E       S    ++    N      
Sbjct: 898  RQDILTVNISNQTTWILRKIVKARDHLSNIGDWDEICIGDKFSMKKAYKKISENGE---- 953

Query: 687  RPHQPEVPWSNVIWSSCIMPKHSFHLWLCKQSRIRTRDRI-RW-MDVDKLCVFCGTKPET 514
                  V W  +I ++   PK  F LW+    R+ T DRI RW +  D     C    ET
Sbjct: 954  -----RVRWRRLICNNYATPKSKFILWMMLHERLPTVDRISRWGVQCDLNYRLCRNDGET 1008

Query: 513  CQHLYFECAFTRAVWTGIRGWIGIDRQMTTFSSAIKWLKKEAKGTSWHSRGQKIAFATT- 337
             QHL+F C+++  VW+ I   +       +    I  +  +A+      +G+ I    T 
Sbjct: 1009 IQHLFFSCSYSAGVWSKICYIMRFPNSGVSHQEIISSVCGQAR----KKKGKLIVMLYTE 1064

Query: 336  -VYQLWNARNRLIFEGEVSHIDLVIHKI 256
             VY +W  RN+  F GE    + V+ KI
Sbjct: 1065 FVYAIWKQRNKRTFTGENKDENEVLRKI 1092


>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
          Length = 653

 Score =  347 bits (889), Expect = 1e-92
 Identities = 192/553 (34%), Positives = 297/553 (53%), Gaps = 12/553 (2%)
 Frame = -2

Query: 1932 VLDSLIDEAQAAFVRGRSMIDNIHLMQELLRQYNRKRTTPRCTIKVDLRKAFDSVSWSFL 1753
            VL   I   Q AFV+ R +I+N+ L  EL++ Y+++  + RC IK+D+ KAF+SV WSF+
Sbjct: 80   VLPKFIAGNQTAFVKDRLLIENLLLATELVKDYHKESVSSRCAIKIDISKAFNSVQWSFI 139

Query: 1752 RDMLIGLNFPPIFVGWIMECVTTTSYSISINGGLHGIFKGEKGIRQGDPLSPYLFVLCME 1573
            R++L+ ++FP  FV WIM C++T S+S+ +NG L G F+ ++G+RQG  LSPYLFV+ M+
Sbjct: 140  RNILLSMDFPMEFVHWIMLCISTASFSVQVNGELVGFFQSKRGLRQGCSLSPYLFVMSMD 199

Query: 1572 YFSRLLRMKTTNSHFNYHPKCGLLKITHLVYADDLMLLSRGDPISIRILMDCLKDFGHKS 1393
              S+LL    +   F YH +C  L +THL +ADDLM+LS G   SI  +++    F   S
Sbjct: 200  VLSKLLDQAASAKKFGYHSRCKELSLTHLSFADDLMVLSDGKVRSIDGIVEVFDIFAKFS 259

Query: 1392 GMNMNISKSNIFMAGICESDTRQILDLSQLARGTMPFRYLGIPLAAEKLKVVYYEELVGK 1213
            G+ +++ KS I++AG+ E    +I +  Q   G +P RYLG+PL  ++L    Y  L+  
Sbjct: 260  GLKISMEKSTIYLAGVTEDVYHEIQNRYQFDVGQLPVRYLGLPLVTKRLTATDYSPLLEH 319

Query: 1212 IRTYVDGWSANTLSYAGRTELVRSVLQGVECFWLSILPIPAVVRSKIISICRSFLWG--S 1039
            I+  +  W+   LSYAGR  L+ SVL  +  FWL+   +P     +I  IC +FLW    
Sbjct: 320  IKKKIGTWTTRYLSYAGRLNLITSVLWSICNFWLAAFRLPRECIREIDKICSAFLWSGPD 379

Query: 1038 VNP---SVAWSTLCLPKSEGGLGLRDFQSWNHALLAKTLWNIQGNKDTLWYKWIHQVYLR 868
            +NP    V W  +C PK EGGLGLR  +  N     K +W I  + ++LW +WI Q  L+
Sbjct: 380  LNPRKTRVCWGDVCKPKQEGGLGLRSLKEMNEVSCLKLIWRIVSHTNSLWVRWIEQYLLK 439

Query: 867  GRNIWDWELRRD-DSPLFKNLHSIRDIIVQKCGSQERAAQLLASWNANHRVKGPNNPYNF 691
                W  +   + DS L++  +   D  + K  +++       +WN       P      
Sbjct: 440  HDTFWSVQTTTNMDSVLWRGRN---DEYMPKFSTRD-------TWNQTRNTSTP------ 483

Query: 690  FRPHQPEVPWSNVIWSSCIMPKHSFHLWLCKQSRIRTRDR-IRW-MDVDKLCVFCGTKPE 517
                   V W   IW +   PK SF  WL  Q+R+ T D+ ++W   +   CV C    E
Sbjct: 484  -------VTWHMGIWFAHATPKFSFCAWLAVQNRLSTGDKMLQWNRRLSPTCVLCNNNIE 536

Query: 516  TCQHLYFECAFTRAVWTGIRGWIGIDRQMTTFSSAIKWLKKEAKGTSWHSRGQ----KIA 349
            T  HL+F C +T  +W  +   I   +  T +S+ +      +  T+W +R +    +  
Sbjct: 537  TRNHLFFSCCYTAEIWENLAKNIYKAKFSTNWSTIL-----TSVSTTWRNRTESFLARYI 591

Query: 348  FATTVYQLWNARN 310
            F  T++ +W+ RN
Sbjct: 592  FQATIHTIWHERN 604


>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
            lycopersicum]
          Length = 717

 Score =  340 bits (872), Expect = 1e-90
 Identities = 156/365 (42%), Positives = 229/365 (62%), Gaps = 5/365 (1%)
 Frame = -2

Query: 1932 VLDSLIDEAQAAFVRGRSMIDNIHLMQELLRQYNRKRTTPRCTIKVDLRKAFDSVSWSFL 1753
            V+ ++I ++QA F+ GR + DNI L  EL++ Y RK  +PRC +K+DL KA+DSV W FL
Sbjct: 346  VIHTIISDSQAGFIPGRKIGDNIILAHELVKAYTRKNVSPRCMLKIDLHKAYDSVEWPFL 405

Query: 1752 RDMLIGLNFPPIFVGWIMECVTTTSYSISINGGLHGIFKGEKGIRQGDPLSPYLFVLCME 1573
              ++ GL FP +F  W+M+CV T +Y+I +NG     F   KG+RQGDP+SP+LF + ME
Sbjct: 406  EQVMEGLGFPDLFTKWVMKCVKTVNYTIVVNGQNTQRFDAAKGLRQGDPMSPFLFAIAME 465

Query: 1572 YFSRLLRMKTTNSHFNYHPKCGLLKITHLVYADDLMLLSRGDPISIRILMDCLKDFGHKS 1393
            Y SRLL+    +  F YHPK   L +THL +ADDL+L SRGD  SI+ L  C  +F   S
Sbjct: 466  YLSRLLKGLKEDKSFKYHPKYAKLDVTHLCFADDLLLFSRGDLNSIKALQKCFTEFSQAS 525

Query: 1392 GMNMNISKSNIFMAGICESDTRQILDLSQLARGTMPFRYLGIPLAAEKLKVVYYEELVGK 1213
            G+  N++KS+I+  G+     +QI+         +PF+YLG+PL+++KL  + +  L+ K
Sbjct: 526  GLQANLNKSSIYCGGVQMEVRQQIIQQLGYTIEELPFKYLGVPLSSKKLNTIQWYPLIEK 585

Query: 1212 IRTYVDGWSANTLSYAGRTELVRSVLQGVECFWLSILPIPAVVRSKIISICRSFLWGSV- 1036
            +   ++ W+A  LSYAGR +LV++VL GV+  W  +  IPA +   I  +CRS+LW  V 
Sbjct: 586  VMARINSWTAKKLSYAGRAQLVKTVLFGVQALWAQLFIIPAKIIKLIEGLCRSYLWSGVG 645

Query: 1035 ----NPSVAWSTLCLPKSEGGLGLRDFQSWNHALLAKTLWNIQGNKDTLWYKWIHQVYLR 868
                   +AW  +C PK EGGLGL + + WN + + K  W++   +D LW KWIH  Y++
Sbjct: 646  YVTKKALIAWDKVCSPKYEGGLGLINLKIWNRSAVTKLCWDLANKEDKLWIKWIHAYYIK 705

Query: 867  GRNIW 853
            G+  W
Sbjct: 706  GQREW 710


>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
          Length = 506

 Score =  330 bits (845), Expect = 2e-87
 Identities = 180/492 (36%), Positives = 269/492 (54%), Gaps = 10/492 (2%)
 Frame = -2

Query: 1701 MECVTTTSYSISINGGLHGIFKGEKGIRQGDPLSPYLFVLCMEYFSRLLRMKTTNSHFNY 1522
            M  V+T SY  ++NG    I    +G+RQGDP+SP LFV+ ME  +R L     +  FNY
Sbjct: 1    MIAVSTVSYRFNVNGYKTEIMGARRGLRQGDPISPMLFVIVMECLNRYLYKMQKDGDFNY 60

Query: 1521 HPKCGLLKITHLVYADDLMLLSRGDPISIRILMDCLKDFGHKSGMNMNISKSNIFMAGIC 1342
            HPKC  LKIT+L +ADDL+L SRGD IS+ ++M   + F   +G+ +N  K ++  AGI 
Sbjct: 61   HPKCDKLKITNLCFADDLLLFSRGDKISVGMMMRAYESFSKATGLLVNPQKCSLLCAGID 120

Query: 1341 ESDTRQILDLSQLARGTMPFRYLGIPLAAEKLKVVYYEELVGKIRTYVDGWSANTLSYAG 1162
                R+IL++S    G +PF+YLG+P+ ++KL  ++Y  L+ KI   +  W+A  LSYAG
Sbjct: 121  AVTKREILEVSGFQEGQLPFKYLGVPVTSKKLSTIHYSPLIDKIVGKIKHWTARLLSYAG 180

Query: 1161 RTELVRSVLQGVECFWLSILPIPAVVRSKIISICRSFLW-----GSVNPSVAWSTLCLPK 997
            R +LV SV+  +  +WL+  P P  V  KI +ICR FLW     GS    VAW  +C P+
Sbjct: 181  RLQLVNSVMFALTNYWLNCFPFPKSVLQKIEAICRIFLWTGGFEGSRKSPVAWKQICSPR 240

Query: 996  SEGGLGLRDFQSWNHALLAKTLWNIQGNKDTLWYKWIHQVYLRGRNIWDWELRRDDSPLF 817
            S GGL + D   WN A L K LWN+   +D+LW KWI   Y++   +   E++  DS + 
Sbjct: 241  SCGGLNIIDIDIWNKANLMKLLWNLSSKEDSLWVKWIQAYYVKRSELMHIEMKNTDSWIM 300

Query: 816  KNLHSIRDIIVQKCGSQERAAQLLASWNANHRVKGPNNPYNFFRPHQ---PEVPWSNVIW 646
            K +   R+ + +K  + E              ++G  N    +R  Q       W N+++
Sbjct: 301  KAILKQREDL-EKIDNMEEL-----------MIRGSINMGKLYRKLQDCGQRKEWKNLLY 348

Query: 645  SSCIMPKHSFHLWLCKQSRIRTRDRI--RWMDVDKLCVFCGTKPETCQHLYFECAFTRAV 472
             +   P+ +F LWL    R+ T+DR+    M  DK C FC ++ E+  HL+F C  ++ V
Sbjct: 349  GNTARPRANFILWLACHGRLSTKDRLCKYGMIDDKSCCFC-SEEESMNHLFFVCDNSKRV 407

Query: 471  WTGIRGWIGIDRQMTTFSSAIKWLKKEAKGTSWHSRGQKIAFATTVYQLWNARNRLIFEG 292
            W  +  W+ I    + + + + WL    KG    +   K+A A T+Y++WN RN  IF G
Sbjct: 408  WMEVLQWVQIRHDPSDWPNELHWLTHHTKGKGTRAAVLKMAIAETIYEIWNIRNNKIF-G 466

Query: 291  EVSHIDLVIHKI 256
            +   I+ V  KI
Sbjct: 467  QAIDINTVGKKI 478


>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
            subsp. vesca]
          Length = 958

 Score =  330 bits (845), Expect = 2e-87
 Identities = 186/560 (33%), Positives = 286/560 (51%), Gaps = 13/560 (2%)
 Frame = -2

Query: 1929 LDSLIDEAQAAFVRGRSMIDNIHLMQELLRQYNRKRTTPRCTIKVDLRKAFDSVSWSFLR 1750
            L  ++  +Q+ F+ GR + DNI L QE++  Y++    PRCT  VD+ KA D+V W F+ 
Sbjct: 375  LHLIVGPSQSTFIPGRRIGDNILLAQEIICDYHKADGQPRCTFMVDMMKANDTVEWDFII 434

Query: 1749 DMLIGLNFPPIFVGWIMECVTTTSYSISINGGLHGIFKGEKGIRQGDPLSPYLFVLCMEY 1570
              L   N P   +GWI  C+++  +S+ +NG L G F   +G+RQGDPLSPYLFV+ ME 
Sbjct: 435  ATLQAFNIPSTLIGWIKSCISSAKFSVCVNGELAGFFARRRGLRQGDPLSPYLFVIAMEV 494

Query: 1569 FSRLLRMKTTNSH-FNYHPKCGLLKITHLVYADDLMLLSRGDPISIRILMDCLKDFGHKS 1393
             S  ++ +   S  F YH +C  L ++HL +ADDL++   GD  S+R L D   +F   S
Sbjct: 495  LSLCIQRRINCSPCFRYHWRCDQLNLSHLCFADDLLMFCNGDENSVRTLHDAFSNFESLS 554

Query: 1392 GMNMNISKSNIFMAGICESDTRQILDLSQLARGTMPFRYLGIPLAAEKLKVVYYEELVGK 1213
             +  N+S+S IF+AG+  + +  +L ++  + GT P RYLGIPL   KL++     L+ +
Sbjct: 555  SLKANVSESKIFLAGVDGNSSDSVLQVTNFSLGTCPVRYLGIPLITSKLRMQDCSPLLDR 614

Query: 1212 IRTYVDGWSANTLSYAGRTELVRSVLQGVECFWLSILPIPAVVRSKIISICRSFLW---- 1045
            I T +  W    LS+AGR +L++SVL  ++ +W S L +P  V   I    R FLW    
Sbjct: 615  IETRIKSWENKVLSFAGRLQLIQSVLSSIQVYWASHLILPKKVLKDIEKRLRCFLWAGNC 674

Query: 1044 -GSVNPSVAWSTLCLPKSEGGLGLRDFQSWNHALLAKTLWNIQGNKDTLWYKWIHQVYLR 868
             G     VAWS +CLPK EGGLG++D   WN AL+   +WN+  +    W  W+    L+
Sbjct: 675  SGRAATKVAWSEICLPKCEGGLGIKDLHCWNKALMISHIWNLVSSSSNFWTDWVKVYLLK 734

Query: 867  GRNIWDWELRRDDSPLFKNLHSIRDIIVQKCGSQERAAQLLASWNANHRVKGPNNPYNFF 688
            G + W+  L    S  ++ L  IR++      +     +  + W  N    GP       
Sbjct: 735  GNSFWNAPLPSICSWNWRKLLKIRELCCSFFVNIIGDGRATSLWFDNWHPLGPLT----- 789

Query: 687  RPHQPEVPW-SNVIW-----SSCIMPKHSFHLWLCKQSRIR-TRDRIRWMDVDKLCVFCG 529
                  + W SN+I       S ++  + F+      + +R +R  + W    +L  F  
Sbjct: 790  ------LRWSSNIIGESGLSKSAMLTPNGFYSTSSAWNTLRPSRFIVPWY---RLVWFVA 840

Query: 528  TKPETCQHLYFECAFTRAVWTGIRGWIGIDRQMTTFSSAIKWLKKEAKGTSWHSRGQKIA 349
               ET  HL+F+CA++  +WT +     + + +  +S  I W+    KG S      K+A
Sbjct: 841  ---ETHNHLFFDCAYSFGIWTHVLSKCDVSKPLLPWSDFIFWVATNWKGNSLPVVILKLA 897

Query: 348  FATTVYQLWNARNRLIFEGE 289
                VY +W  RN   F  E
Sbjct: 898  LQAVVYAIWRERNNRRFRNE 917


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  321 bits (823), Expect = 6e-85
 Identities = 189/577 (32%), Positives = 287/577 (49%), Gaps = 86/577 (14%)
 Frame = -2

Query: 1932 VLDSLIDEAQAAFVRGRSMIDNIHLMQELLRQYNRKRTTPRCTIKVDLRKAFDSVSWSFL 1753
            +L S I + Q+AFV+ R +++N+ L  EL++ Y+++  TPRC +K+D+ KAFDSV W FL
Sbjct: 850  LLPSFILQNQSAFVKERLLMENVLLATELVKDYHKESVTPRCAMKIDISKAFDSVQWQFL 909

Query: 1752 RDMLIGLNFPPIFVGWIMECVTTTSYSISINGGLHGIFKGEKGIRQGDPLSPYLFVLCME 1573
             + L  LNFP  F  WI  C++T ++S+ +NG L G F   +G+RQG  LSPYLFV+CM 
Sbjct: 910  LNTLEALNFPETFRHWIKLCISTATFSVQVNGELAGFFGSSRGLRQGCALSPYLFVICMN 969

Query: 1572 YFSRLLRMKTTNSHFNYHPKCGLLKITHLVYADDLMLLSRGDPISIRILMDCLKDFGHKS 1393
              S ++     + +  YHPKC  + +THL +ADDLM+   G   SI  +++  K+F  +S
Sbjct: 970  VLSHMIDEAAVHRNIGYHPKCEKIGLTHLCFADDLMVFVDGHQWSIEGVINVFKEFAGRS 1029

Query: 1392 GMNMNISKSNIFMAGICESDTRQILDLSQLARGTMPFRYLGIPLAAEKLKVVYYEELVGK 1213
            G+ +++ KS I++AG+  SD  Q L     A G +P RYLG+PL  +++    Y  L+  
Sbjct: 1030 GLQISLEKSTIYLAGVSASDRVQTLSSFPFANGQLPVRYLGLPLLTKQMTTADYSPLIEA 1089

Query: 1212 IRTYVDGWSANTLSYAGRTELVRSVLQGVECFWLSILPIPAVVRSKIISICRSFLWGS-- 1039
            ++T +  W+A +LSYAGR  L+ SV+  +  FW+S   +PA    +I  +C +FLW    
Sbjct: 1090 VKTKISSWTARSLSYAGRLALLNSVIVSIANFWMSAYRLPAGCIREIEKLCSAFLWSGPV 1149

Query: 1038 VNPS---VAWSTLCLPKSEGGLGLRDFQSWNHALLAKT---------------LWNIQGN 913
            +NP    +AWS++C PK EGGLG++     N     K                +W     
Sbjct: 1150 LNPKKAKIAWSSICQPKKEGGLGIKSLAEANKVSCLKLIWRLLSTQPSLWVTWIWTFIIR 1209

Query: 912  KDTLWY--------KWIHQVYLRGRNI----WDWELRRDDS------------------- 826
            K T W          W+ +  L+ R +       E+R   S                   
Sbjct: 1210 KGTFWSANERSSLGSWMWKKLLKYRELAKSMHKVEVRNGSSTSFWYDHWSHLGRLLDITG 1269

Query: 825  ---------PLFKNLHSIR----------------DIIVQKCGSQER-AAQLLASWNANH 724
                     PL  NL ++                 +  +Q+   QER A   ++ W +  
Sbjct: 1270 TRRVIDLGIPLETNLETVLRTHQHRQHRAAIYNRINAEIQRLQQQEREAGPDISLWRS-- 1327

Query: 723  RVKGPNNP-------YNFFRPHQPEVPWSNVIWSSCIMPKHSFHLWLCKQSRIRTRDRIR 565
             +K   N        +N  R HQP+  W   +W     PK+SF LWL  Q+R+ T DRI+
Sbjct: 1328 -LKNDFNKRFITKVTWNNVRTHQPQQNWYKGVWFPYSTPKYSFLLWLTVQNRLSTGDRIK 1386

Query: 564  WMDVDKL--CVFCGTKPETCQHLYFECAFTRAVWTGI 460
              +  +L  C  C    ET  HL+F C +T  VW  +
Sbjct: 1387 AWNSGQLVTCTLCNNAEETRDHLFFSCQYTSYVWEAL 1423


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score =  319 bits (818), Expect = 2e-84
 Identities = 166/414 (40%), Positives = 240/414 (57%), Gaps = 5/414 (1%)
 Frame = -2

Query: 1935 SVLDSLIDEAQAAFVRGRSMIDNIHLMQELLRQYNRKRTTPRCTIKVDLRKAFDSVSWSF 1756
            ++L   I  +Q+AFV+GR + +N+ L  EL++ + +   + R  +KVDLRKAFDSV W F
Sbjct: 545  NILPLWISPSQSAFVKGRLLTENVLLATELVQGFGQANISSRGVLKVDLRKAFDSVGWGF 604

Query: 1755 LRDMLIGLNFPPIFVGWIMECVTTTSYSISINGGLHGIFKGEKGIRQGDPLSPYLFVLCM 1576
            + + L   N PP FV WI +C+T+TS+SI+++G L G FKG KG+RQGDPLSP LFV+ M
Sbjct: 605  IIETLKAANAPPRFVNWIKQCITSTSFSINVSGSLCGYFKGSKGLRQGDPLSPSLFVIAM 664

Query: 1575 EYFSRLLRMKTTNSHFNYHPKCGLLKITHLVYADDLMLLSRGDPISIRILMDCLKDFGHK 1396
            E  SRLL  K ++    YHPK   ++I+ L +ADDLM+   G   S+R +   L+ F + 
Sbjct: 665  EILSRLLENKFSDGSIGYHPKASEVRISSLAFADDLMIFYDGKASSLRGIKSVLESFKNL 724

Query: 1395 SGMNMNISKSNIFMAGICESDTRQILDLSQLARGTMPFRYLGIPLAAEKLKVVYYEELVG 1216
            SG+ MN  KS ++ AG+ ++D    L       GT PFRYLG+PL   KL+   Y +L+ 
Sbjct: 725  SGLEMNTEKSAVYTAGLEDTDKEDTLAFG-FVNGTFPFRYLGLPLLHRKLRRSDYSQLID 783

Query: 1215 KIRTYVDGWSANTLSYAGRTELVRSVLQGVECFWLSILPIPAVVRSKIISICRSFLWGS- 1039
            KI    + W+  TLS+AGR +L+ SV+     FWLS   +P      I  +C  FLWG+ 
Sbjct: 784  KIAARFNHWATKTLSFAGRLQLISSVIYSTVNFWLSSFILPKCCLKTIEQMCNRFLWGND 843

Query: 1038 ----VNPSVAWSTLCLPKSEGGLGLRDFQSWNHALLAKTLWNIQGNKDTLWYKWIHQVYL 871
                 +  V+W   CLPK+EGGLGLR+F +WN  L  + +W +   +D+LW  W H   L
Sbjct: 844  ITRRGDIKVSWQNSCLPKAEGGLGLRNFWTWNKTLNLRLIWMLFARRDSLWVAWNHANRL 903

Query: 870  RGRNIWDWELRRDDSPLFKNLHSIRDIIVQKCGSQERAAQLLASWNANHRVKGP 709
            R  N W+ E     S ++K +  +R +  +         QLL+ W  +    GP
Sbjct: 904  RHVNFWNAEAASHHSWIWKAILGLRPLAKRFLRGAVGNGQLLSYWYDHWSNLGP 957



 Score = 61.2 bits (147), Expect = 2e-06
 Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 2/120 (1%)
 Frame = -2

Query: 663  WSNVIWSSCIMPKHSFHLWLCKQSRIRTRDRIRWMDVDK--LCVFCGTKPETCQHLYFEC 490
            W+  +W    +PK++F+ W+   +R+  R R      ++  LC  C  + ET  HL+  C
Sbjct: 1051 WAAAVWYKGCIPKYAFNFWVAHLNRLPVRARTTHWSTNRPSLCCVCQRETETRDHLFIHC 1110

Query: 489  AFTRAVWTGIRGWIGIDRQMTTFSSAIKWLKKEAKGTSWHSRGQKIAFATTVYQLWNARN 310
                 +W  +    G  +    +   I+W+   +   S+    +K+A  T ++ +W  RN
Sbjct: 1111 TLGSLIWQQVLARFGRSQMFREWKDIIEWML--SNQGSFSGTLKKLAVQTAIFHIWKERN 1168


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score =  309 bits (792), Expect = 2e-81
 Identities = 165/410 (40%), Positives = 241/410 (58%), Gaps = 9/410 (2%)
 Frame = -2

Query: 1932 VLDSLIDEAQAAFVRGRSMIDNIHLMQELLRQYNRKRTTPRCTIKVDLRKAFDSVSWSFL 1753
            +L  +I  AQ+AF+ GRS+ +N+ L  +L+  YN    +PR  +KVDL+KAFDSV W F+
Sbjct: 547  LLSGVISSAQSAFLPGRSLAENVLLATDLVHGYNWSNISPRGMLKVDLKKAFDSVRWEFV 606

Query: 1752 RDMLIGLNFPPIFVGWIMECVTTTSYSISINGGLHGIFKGEKGIRQGDPLSPYLFVLCME 1573
               L  L  P  F+ WI +C++T ++++SINGG  G FK  KG+RQGDPLSPYLFVL ME
Sbjct: 607  IAALRALAIPEKFINWISQCISTPTFTVSINGGNGGFFKSTKGLRQGDPLSPYLFVLAME 666

Query: 1572 YFSRLLRMKTTNSHFNYHPKCGLLKITHLVYADDLMLLSRGDPISIRILMDCLKDFGHKS 1393
             FS LL  +  +   +YHPK   L I+HL++ADD+M+   G   S+  + + L DF   S
Sbjct: 667  AFSNLLHSRYESGLIHYHPKASNLSISHLMFADDVMIFFDGGSFSLHGICETLDDFASWS 726

Query: 1392 GMNMNISKSNIFMAGICESDTRQILDLSQLARGTMPFRYLGIPLAAEKLKVVYYEELVGK 1213
            G+ +N  KS++++AG+ + ++           GT+P RYLG+PL   KL++  YE L+ K
Sbjct: 727  GLKVNKDKSHLYLAGLNQLESNANAAYG-FPIGTLPIRYLGLPLMNRKLRIAEYEPLLEK 785

Query: 1212 IRTYVDGWSANTLSYAGRTELVRSVLQGVECFWLSILPIPAVVRSKIISICRSFLW-GSV 1036
            I      W    LS+AGR +L+ SV+ G   FW+S   +P     +I S+C  FLW G++
Sbjct: 786  ITARFRSWVNKCLSFAGRIQLISSVIFGSINFWMSTFLLPKGCIKRIESLCSRFLWSGNI 845

Query: 1035 NPS----VAWSTLCLPKSEGGLGLRDFQSWNHALLAKTLWNIQGNKDTLWYKWIHQVYLR 868
              +    V+W+ LCLPKSEGGLGLR    WN  L  + +W +   KD+LW  W H  +L 
Sbjct: 846  EQAKGIKVSWAALCLPKSEGGLGLRRLLEWNKTLSMRLIWRLFVAKDSLWADWQHLHHLS 905

Query: 867  GRNIWDWELRRDDSPLFKNLHSIRDI----IVQKCGSQERAAQLLASWNA 730
              + W  E  + DS  +K L S+R +    +V K G+  +A     +W +
Sbjct: 906  RGSFWAVEGGQSDSWTWKRLLSLRPLAHQFLVCKVGNGLKADYWYDNWTS 955



 Score = 64.3 bits (155), Expect = 2e-07
 Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 3/132 (2%)
 Frame = -2

Query: 687  RPHQPEVPWSNVIWSSCIMPKHSFHLWLCKQSRIRTRDRI-RWMDVDK-LCVFCGTKPET 514
            RP      W++ IW    +PK++F++W+   +R+ TR R+  W  +    CV C    E+
Sbjct: 1043 RPKATVKSWASSIWFKGAVPKYAFNMWVSHLNRLLTRQRLASWGHIQSDACVLCSFASES 1102

Query: 513  CQHLYFECAFTRAVWTGI-RGWIGIDRQMTTFSSAIKWLKKEAKGTSWHSRGQKIAFATT 337
              HL   C F+  VW  + R      R  +++S  + W+++ +       R  KI     
Sbjct: 1103 RDHLLLICEFSAQVWRLVFRRICPRQRLFSSWSELLSWVRQSSPEAPPLLR--KIVSQVV 1160

Query: 336  VYQLWNARNRLI 301
            VY LW  RN L+
Sbjct: 1161 VYNLWRQRNNLL 1172


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score =  309 bits (792), Expect = 2e-81
 Identities = 182/560 (32%), Positives = 276/560 (49%), Gaps = 18/560 (3%)
 Frame = -2

Query: 1932 VLDSLIDEAQAAFVRGRSMIDNIHLMQELLRQYNRKRTTPRCTIKVDLRKAFDSVSWSFL 1753
            +L   I   Q+AF+  R +++N+ L  EL++ Y++   +PRC +K+DL KAFDSV W FL
Sbjct: 819  LLPEFIAPNQSAFISDRLLMENLLLASELVKDYHKDGLSPRCAMKIDLSKAFDSVQWPFL 878

Query: 1752 RDMLIGLNFPPIFVGWIMECVTTTSYSISINGGLHGIFKGEKGIRQGDPLSPYLFVLCME 1573
             + L  L+ P  F+ WI  C++T S+S+ +NG           +RQG  LSPYLFV+CM 
Sbjct: 879  LNTLAALDIPEKFIHWINLCISTASFSVQVNG-----------LRQGCSLSPYLFVICMN 927

Query: 1572 YFSRLLRMKTTNSHFNYHPKCGLLKITHLVYADDLMLLSRGDPISIRILMDCLKDFGHKS 1393
              S +L        F YHP+C  + +THL +ADD+M+ S G   S+  ++   KDF   S
Sbjct: 928  VLSAMLDKGAVEKRFGYHPRCRNMGLTHLCFADDIMVFSAGSAHSLEGVLAIFKDFAAFS 987

Query: 1392 GMNMNISKSNIFMAGICESDTRQILDLSQLARGTMPFRYLGIPLAAEKLKVVYYEELVGK 1213
            G+N+++ KS +FMA I       IL       G++P RYLG+PL  +++ +     L+ K
Sbjct: 988  GLNISLEKSTLFMASISSETCASILARFPFDSGSLPVRYLGLPLMTKRMTLADCLPLLEK 1047

Query: 1212 IRTYVDGWSANTLSYAGRTELVRSVLQGVECFWLSILPIPAVVRSKIISICRSFLWG--S 1039
            IR+ +  W    LSYAGR +L+ SV+  +  FW+S   +P     +I  I  +FLW    
Sbjct: 1048 IRSRISSWKNRFLSYAGRLQLLNSVISSLTKFWISAFRLPRACIREIEQISAAFLWSGTD 1107

Query: 1038 VNP---SVAWSTLCLPKSEGGLGLRDFQSWNHALLAKTLWNIQGNKDTLWYKWIHQVYLR 868
            +NP    VAW  +C PKSEGGLGLR     N     K +W +   K +LW  WI    +R
Sbjct: 1108 LNPHKAKVAWHDVCKPKSEGGLGLRSLVDANKICCFKLIWRLVSAKHSLWVNWIQNNLIR 1167

Query: 867  --GRNIWDWELRRDDSPLFKNLHSIRDIIVQKCGSQERAAQLLASWNANHRVKGPNNPYN 694
                 +     R     +  ++    + ++ +    E+   L  S     + K       
Sbjct: 1168 TVAEALSSHRRRSHRDDILNDIEEELEKLLCRGICTEQDRSLCRSIGGQFKAK------- 1220

Query: 693  FFRP---HQPE-----VPWSNVIWSSCIMPKHSFHLWLCKQSRIRTRDRI-RW-MDVDKL 544
            FF P   HQ         W   IW S   PK +F  WL    R+ T D++  W   +  +
Sbjct: 1221 FFSPEIWHQIREQGLVKQWHKAIWFSGATPKFTFISWLAAHDRLTTGDKMASWNRGISSV 1280

Query: 543  CVFCGTKPETCQHLYFECAFTRAVWTGIRGWIGIDRQMTTFSSAIKWLK-KEAKGTSWHS 367
            CV C    E+  HL+F C F+  +W  +   + + R  T F + +  L  ++  GT    
Sbjct: 1281 CVLCNISAESRDHLFFSCNFSSHIWDRLTRRLLLCRYTTNFPALLLLLSGQDFSGTKRFL 1340

Query: 366  RGQKIAFATTVYQLWNARNR 307
               +  F  T++ LW  RN+
Sbjct: 1341 --LRYVFQATIHTLWRERNK 1358


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score =  306 bits (785), Expect = 2e-80
 Identities = 148/408 (36%), Positives = 236/408 (57%), Gaps = 6/408 (1%)
 Frame = -2

Query: 1932 VLDSLIDEAQAAFVRGRSMIDNIHLMQELLRQYNRKRTTPRCTIKVDLRKAFDSVSWSFL 1753
            +L + I + Q+AFVR R +I+N+ L  EL++ Y++   +PRC +K+D+ KAFDSV W FL
Sbjct: 126  MLPTFILQNQSAFVRERLLIENVLLATELVKDYHKDSISPRCAMKIDISKAFDSVQWQFL 185

Query: 1752 RDMLIGLNFPPIFVGWIMECVTTTSYSISINGGLHGIFKGEKGIRQGDPLSPYLFVLCME 1573
             + L  LNFP  F  WI  C++T ++S+ +NG L G F  ++G+RQG  LSPYLFV+CM 
Sbjct: 186  LNTLEALNFPENFCHWIKLCISTATFSVQVNGELAGFFGSKRGLRQGCALSPYLFVICMN 245

Query: 1572 YFSRLLRMKTTNSHFNYHPKCGLLKITHLVYADDLMLLSRGDPISIRILMDCLKDFGHKS 1393
              S ++ +   + +  YHPKC  L +THL +ADDLM+   G   S+  +++  K+F  KS
Sbjct: 246  VLSHMIDVAAVHRNIGYHPKCKKLSLTHLCFADDLMVFIDGQQRSVEGVINIFKEFAGKS 305

Query: 1392 GMNMNISKSNIFMAGICESDTRQILDLSQLARGTMPFRYLGIPLAAEKLKVVYYEELVGK 1213
            G+++++ KS +++AG+ E +   IL     A G +P RYLG+PL  +++    Y  L+ K
Sbjct: 306  GLHISLEKSTLYLAGVSELNRNNILSAFPFASGQLPVRYLGLPLLTKQMTTADYSPLLDK 365

Query: 1212 IRTYVDGWSANTLSYAGRTELVRSVLQGVECFWLSILPIPAVVRSKIISICRSFLWG--S 1039
            +R+ +  W+A +LSYAGR  L+ SV+  +  FW+S   +PA    +I  +C +FLW    
Sbjct: 366  VRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAFLWSGPE 425

Query: 1038 VNP---SVAWSTLCLPKSEGGLGLRDFQSWNHALLAKTLWNIQGNKDTLWYKWIHQVYLR 868
            +NP    + W++LC  K EGGLG++     N     K +W +   + +LW  W+    +R
Sbjct: 426  LNPKKAKITWTSLCKLKQEGGLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNWVWTYIIR 485

Query: 867  GRNIWDWELRRD-DSPLFKNLHSIRDIIVQKCGSQERAAQLLASWNAN 727
              + W    R    S ++K L   RD+    C  + ++    + W  N
Sbjct: 486  KGSFWSANDRSSLGSWMWKKLLKYRDVAKSMCKVEIKSGSSTSFWYDN 533


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score =  306 bits (783), Expect = 3e-80
 Identities = 157/386 (40%), Positives = 227/386 (58%), Gaps = 5/386 (1%)
 Frame = -2

Query: 1932 VLDSLIDEAQAAFVRGRSMIDNIHLMQELLRQYNRKRTTPRCTIKVDLRKAFDSVSWSFL 1753
            +L ++I  +Q+AF+ GRS+ +N+ L  E++  YNR   +PR  +KVDL+KAFDSV W F+
Sbjct: 407  LLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKWEFV 466

Query: 1752 RDMLIGLNFPPIFVGWIMECVTTTSYSISINGGLHGIFKGEKGIRQGDPLSPYLFVLCME 1573
               L  L  P  ++ WI +C+TT S++IS+NG   G F+  KG+RQGDPLSPYLFVL ME
Sbjct: 467  TAALRALAIPERYINWIHQCITTPSFTISVNGATGGFFRSTKGLRQGDPLSPYLFVLAME 526

Query: 1572 YFSRLLRMKTTNSHFNYHPKCGLLKITHLVYADDLMLLSRGDPISIRILMDCLKDFGHKS 1393
             FS+LL  +  + + +YHPK G L I+HL++ADD+M+   G   S+  + + L DF   S
Sbjct: 527  VFSKLLYSRYDSGYIHYHPKAGDLSISHLMFADDVMIFFDGGSSSMHGICETLDDFADWS 586

Query: 1392 GMNMNISKSNIFMAGICESDTRQILDLSQLARGTMPFRYLGIPLAAEKLKVVYYEELVGK 1213
            G+ +N  KS +F AG+  S+ R          GT P RYLG+PL   KL++  Y  L+ K
Sbjct: 587  GLKVNKDKSQLFQAGLDLSE-RITSAAYGFPAGTFPIRYLGLPLMCRKLRIADYGPLLEK 645

Query: 1212 IRTYVDGWSANTLSYAGRTELVRSVLQGVECFWLSILPIPAVVRSKIISICRSFLW---- 1045
            +   +  W +  LS+AGRT+L+ SV+ G+  FW+S   +P     KI S+C  FLW    
Sbjct: 646  LSARLRSWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSI 705

Query: 1044 -GSVNPSVAWSTLCLPKSEGGLGLRDFQSWNHALLAKTLWNIQGNKDTLWYKWIHQVYLR 868
             G  +  V+W   CLPKSEGGLG R F  WN  LL + +W +     +LW +W     L 
Sbjct: 706  DGRKSSKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQWQRHHRLG 765

Query: 867  GRNIWDWELRRDDSPLFKNLHSIRDI 790
              + W     + D   +K L ++R +
Sbjct: 766  HASFWQVNALQTDPWTWKMLLNLRPL 791



 Score = 65.5 bits (158), Expect = 8e-08
 Identities = 40/161 (24%), Positives = 67/161 (41%), Gaps = 3/161 (1%)
 Frame = -2

Query: 699  YNFFRPHQPEVPWSNVIWSSCIMPKHSFHLWLCKQSRIRTRDR-IRWMDVDKL-CVFCGT 526
            +   RP +P   W+  +W    +PKH+F+ W  + +R+ TR R + W  V    C  C  
Sbjct: 898  WEVLRPRRPVKRWAKSVWFKGAVPKHAFNFWTAQLNRLPTRQRLVSWGLVSSAECCLCSF 957

Query: 525  KPETCQHLYFECAFTRAVWTGI-RGWIGIDRQMTTFSSAIKWLKKEAKGTSWHSRGQKIA 349
              ET  HL   C F+  VW  +        R + T++  + W ++        S  +K+ 
Sbjct: 958  DTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCTWAELLSWTRQSTAAAP--SLLRKVV 1015

Query: 348  FATTVYQLWNARNRLIFEGEVSHIDLVIHKIKTHVYKVMFS 226
                VY LW  RN ++         +V   +   +  V+ S
Sbjct: 1016 AQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRELRNVILS 1056


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score =  306 bits (783), Expect = 3e-80
 Identities = 157/386 (40%), Positives = 227/386 (58%), Gaps = 5/386 (1%)
 Frame = -2

Query: 1932 VLDSLIDEAQAAFVRGRSMIDNIHLMQELLRQYNRKRTTPRCTIKVDLRKAFDSVSWSFL 1753
            +L ++I  +Q+AF+ GRS+ +N+ L  E++  YNR   +PR  +KVDL+KAFDSV W F+
Sbjct: 407  LLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKWEFV 466

Query: 1752 RDMLIGLNFPPIFVGWIMECVTTTSYSISINGGLHGIFKGEKGIRQGDPLSPYLFVLCME 1573
               L  L  P  ++ WI +C+TT S++IS+NG   G F+  KG+RQGDPLSPYLFVL ME
Sbjct: 467  TAALRALAIPERYINWIHQCITTPSFTISVNGATGGFFRSTKGLRQGDPLSPYLFVLAME 526

Query: 1572 YFSRLLRMKTTNSHFNYHPKCGLLKITHLVYADDLMLLSRGDPISIRILMDCLKDFGHKS 1393
             FS+LL  +  + + +YHPK G L I+HL++ADD+M+   G   S+  + + L DF   S
Sbjct: 527  VFSKLLYSRYDSGYIHYHPKAGDLSISHLMFADDVMIFFDGGSSSMHGICETLDDFADWS 586

Query: 1392 GMNMNISKSNIFMAGICESDTRQILDLSQLARGTMPFRYLGIPLAAEKLKVVYYEELVGK 1213
            G+ +N  KS +F AG+  S+ R          GT P RYLG+PL   KL++  Y  L+ K
Sbjct: 587  GLKVNKDKSQLFQAGLDLSE-RITSAAYGFPAGTFPIRYLGLPLMCRKLRIADYGPLLEK 645

Query: 1212 IRTYVDGWSANTLSYAGRTELVRSVLQGVECFWLSILPIPAVVRSKIISICRSFLW---- 1045
            +   +  W +  LS+AGRT+L+ SV+ G+  FW+S   +P     KI S+C  FLW    
Sbjct: 646  LSARLRSWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSI 705

Query: 1044 -GSVNPSVAWSTLCLPKSEGGLGLRDFQSWNHALLAKTLWNIQGNKDTLWYKWIHQVYLR 868
             G  +  V+W   CLPKSEGGLG R F  WN  LL + +W +     +LW +W     L 
Sbjct: 706  DGRKSSKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQWQRHHRLG 765

Query: 867  GRNIWDWELRRDDSPLFKNLHSIRDI 790
              + W     + D   +K L ++R +
Sbjct: 766  HASFWQVNALQTDPWTWKMLLNLRPL 791



 Score = 65.5 bits (158), Expect = 8e-08
 Identities = 40/161 (24%), Positives = 67/161 (41%), Gaps = 3/161 (1%)
 Frame = -2

Query: 699  YNFFRPHQPEVPWSNVIWSSCIMPKHSFHLWLCKQSRIRTRDR-IRWMDVDKL-CVFCGT 526
            +   RP +P   W+  +W    +PKH+F+ W  + +R+ TR R + W  V    C  C  
Sbjct: 898  WEVLRPRRPVKRWARSVWFKGAVPKHAFNFWTAQLNRLPTRQRLVSWGLVSSAECCLCSF 957

Query: 525  KPETCQHLYFECAFTRAVWTGI-RGWIGIDRQMTTFSSAIKWLKKEAKGTSWHSRGQKIA 349
              ET  HL   C F+  VW  +        R + T++  + W ++        S  +K+ 
Sbjct: 958  DTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCTWAELLSWTRQSTAAAP--SLLRKVV 1015

Query: 348  FATTVYQLWNARNRLIFEGEVSHIDLVIHKIKTHVYKVMFS 226
                VY LW  RN ++         +V   +   +  V+ S
Sbjct: 1016 AQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRELRNVILS 1056


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score =  303 bits (777), Expect = 1e-79
 Identities = 189/631 (29%), Positives = 302/631 (47%), Gaps = 90/631 (14%)
 Frame = -2

Query: 1932 VLDSLIDEAQAAFVRGRSMIDNIHLMQELLRQYNRKRTTPRCTIKVDLRKAFDSVSWSFL 1753
            +L   I E Q+AFV+ R +I+N+ L  EL++ Y++   + RC IK+D+ KAFDSV WSFL
Sbjct: 200  LLPRFIAENQSAFVKDRLLIENLLLATELVKDYHKDSISARCAIKIDISKAFDSVQWSFL 259

Query: 1752 RDMLIGLNFPPIFVGWIMECVTTTSYSISINGGLHGIFKGEKGIRQGDPLSPYLFVLCME 1573
             + L+ +NF P F+ WI  C+TT S+S+ +NG L G F+ ++G+RQG  LSPYLFV+CM+
Sbjct: 260  TNTLVAMNFSPTFIHWINLCITTASFSVQVNGDLVGYFQSKRGLRQGCSLSPYLFVICMD 319

Query: 1572 YFSRLLRMKTTNSHFNYHPKCGLLKITHLVYADDLMLLSRGDPISIRILMDCLKDFGHKS 1393
              S++L        F +HPKC  L +THL +ADDLM+LS G   SI  +++   +F  +S
Sbjct: 320  VLSKMLDKAAGVRKFGFHPKCQRLGLTHLSFADDLMVLSDGKTRSIEGILEVFDEFCKRS 379

Query: 1392 GMNMNISKSNIFMAGICESDTRQILDLSQLARGTMPFRYLGIPLAAEKLKVVYYEELVGK 1213
            G+ +++ KS ++MAG+     ++I        G +P RYLG+PL  ++L    Y  L+ +
Sbjct: 380  GLRISLEKSTLYMAGVSPIIKQEIAAKFLFDVGQLPVRYLGLPLVTKRLTSADYSPLLEQ 439

Query: 1212 IRTYVDGWSANTLSYAGRTELVRSVLQGVECFWLSILPIPAVVRSKIISICRSFLWGSVN 1033
            I+  +  W+    S+AGR  L++SVL  +  FWL+   +P     +I  +C SFLW    
Sbjct: 440  IKKRIATWTFRFFSFAGRFNLIKSVLWSICNFWLAAFRLPRQCIREIDKLCSSFLWSGSE 499

Query: 1032 PS-----VAWSTLCLPKSEGGLGLRDFQSWN-------------------------HALL 943
             S     ++W  +C PK+EGGLGLR+ +  N                         + + 
Sbjct: 500  MSSHKAKISWDIVCKPKAEGGLGLRNLKEANDVSCLKLVWRIISNSNSLWTKWVAEYLIR 559

Query: 942  AKTLWNIQGNKDTLWYKWIHQVYLRGRNIWDW----ELRRDDSPLFKNLH-SIRDIIVQK 778
             K++W+++  + T    WI +  L+ R++       E+   +S  F   H S    ++  
Sbjct: 560  KKSIWSLK--QSTSMGSWIWRKILKIRDVAKSFSRVEVGNGESASFWYDHWSAHGRLIDT 617

Query: 777  CGSQ-------ERAAQLLASWNANHRVKGPNNPYN------------------------- 694
             G +        R A +  +W    R +   +  N                         
Sbjct: 618  VGDKGTIDLGIPREASVADAWTRRSRRRHRTSLLNEIEEMMAYQRIHHSDAEDTVLWRGK 677

Query: 693  --FFRPH-------------QPEVPWSNVIWSSCIMPKHSFHLWLCKQSRIRTRDR-IRW 562
               F+PH                V W   +W     PK++   WL   +R+ T DR ++W
Sbjct: 678  NDVFKPHFSTRDTWHLIKATSSTVSWHKGVWFRHATPKYALCTWLAIHNRLPTGDRMLKW 737

Query: 561  MD---VDKLCVFCGTKPETCQHLYFECAFTRAVWTGIRGWIGIDRQMTTFSSAIKWLKKE 391
                 V   CV C    +T +HL+F C++   VW  +   I   R  T +S  +  +   
Sbjct: 738  NSSGSVSGNCVLCTNNSKTLEHLFFSCSYASTVWAALAKGIWKTRYSTRWSHLLTHI--- 794

Query: 390  AKGTSWHSRGQ----KIAFATTVYQLWNARN 310
               T +  R +    +  F  T+Y +W  RN
Sbjct: 795  --STHFQDRVEGFLTRYIFQATIYHVWRERN 823


>ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663533 [Glycine max]
          Length = 514

 Score =  301 bits (770), Expect = 9e-79
 Identities = 160/448 (35%), Positives = 243/448 (54%), Gaps = 7/448 (1%)
 Frame = -2

Query: 1791 LRKAFDSVSWSFLRDMLIGLNFPPIFVGWIMECVTTTSYSISINGGLHGIFKGEKGIRQG 1612
            + + +D V W  L  +L     P  F+GW+M+ +TT +Y  +ING L  + + + GI QG
Sbjct: 74   VEETYDMVDWGALEGVLTEFGLPKKFIGWVMKVITTVNYRFNINGELSNVLETKIGIWQG 133

Query: 1611 DPLSPYLFVLCMEYFSRLLRMKTTNSHFNYHPKCGLLKITHLVYADDLMLLSRGDPISIR 1432
            DP+SP LFVL MEYF+R++     N  FN+H +C  L ITHL +ADD+ LL RGD  SI+
Sbjct: 134  DPISPLLFVLMMEYFNRIMVKMQRNPSFNHHSQCERLGITHLSFADDVFLLCRGDKKSIK 193

Query: 1431 ILMDCLKDFGHKSGMNMNISKSNIFMAGICESDTRQILDLSQLARGTMPFRYLGIPLAAE 1252
            +++     F   +G+ +N +K  +F  G+     + I  ++    GT+P RYLG+PL+ +
Sbjct: 194  MIIKAFSFFSKSTGLQINPAKCKVFCGGLNCDSIQVITKITGFEEGTLPVRYLGVPLSCK 253

Query: 1251 KLKVVYYEELVGKIRTYVDGWSANTLSYAGRTELVRSVLQGVECFWLSILPIPAVVRSKI 1072
            KL V +Y  LV KI   +  WS+  LS AGR +LVRS++  +  +W+S+ P+P  V  KI
Sbjct: 254  KLNVHHYLPLVEKIVGKIRHWSSKLLSIAGRIQLVRSIITAIAQYWMSVFPMPKKVIQKI 313

Query: 1071 ISICRSFLW-GSVNPS----VAWSTLCLPKSEGGLGLRDFQSWNHALLAKTLWNIQGNKD 907
             SICRSF+W GS        VAW  +C P   GGL L + + WN   + K LWNI   +D
Sbjct: 314  DSICRSFIWSGSAEVKRKSLVAWKQVCKPARCGGLNLINLELWNVTAMLKCLWNICSKED 373

Query: 906  TLWYKWIHQVYLRGRNIWDWELRRDDSPLFKNLHSIRDIIVQKCGSQERAAQLLASWNAN 727
             LW KWIH  +L+G N+    ++ + + + K+        V K   Q    QL+      
Sbjct: 374  NLWVKWIHAYFLKGDNVMSATIKSNSTWILKS--------VMKQRPQVNNLQLVWIEMLR 425

Query: 726  HRVKGPNNPYNFFRPHQPEVPWSNVIWSSCIMPKHSFHLWLCKQSRIRTRDRIRWMDVDK 547
             R       Y        ++ W  ++  +   P+ +  LWL  Q+R+ T+ R++ M++ +
Sbjct: 426  KRKFSMKQVYMELVEDHNKIDWFRLLRYNRARPRANVTLWLACQNRLATKTRLKNMNMIQ 485

Query: 546  --LCVFCGTKPETCQHLYFECAFTRAVW 469
              LC  C  + E   HL F C  T+A+W
Sbjct: 486  CSLCSLCKEQDEDLDHLMFSCRVTKAIW 513


>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
          Length = 539

 Score =  301 bits (770), Expect = 9e-79
 Identities = 170/499 (34%), Positives = 259/499 (51%), Gaps = 20/499 (4%)
 Frame = -2

Query: 1905 QAAFVRGRSMIDNIHLMQELLRQYNRKRTTPRCTIKVDLRKAFDSVSWSFLRDMLIGLNF 1726
            Q AF+ GR M++N+ L  EL+ +YNR  T+ R  +K+DLRKAFD+VSW F+  ++  LN 
Sbjct: 9    QGAFLEGRLMVENVLLATELVHEYNRPNTSKRAMLKIDLRKAFDTVSWEFITKIMQALNL 68

Query: 1725 PPIFVGWIMECVTTTSYSISINGGLHGIFKGEKGIRQGDPLSPYLFVLCMEYFSRLLRMK 1546
            P  FV W+  C+ T  +S+SING L G FKG +G+RQGDPLSPYLF++ ME  SR+L   
Sbjct: 69   PRTFVTWVKVCMETPKFSVSINGELAGYFKGRRGLRQGDPLSPYLFIMSMEVLSRMLDRC 128

Query: 1545 TTNSHFNYHPKCGLLKITHLVYADDLMLLSRGDPISIRILMDCLKDFGHKSGMNMNISKS 1366
               S  + HPKC    ITHL +ADD+M+ + G+  S+  + + L  F   SG+ +N  K+
Sbjct: 129  AAESRLSLHPKCHSPVITHLAFADDIMIFTSGETRSLLEVKNTLDSFSRASGLYLNTEKT 188

Query: 1365 NIFMAGICESDTRQILDLSQLARGTMPFRYLGIPLAAEKLKVVYYEELVGKIRTYVDGWS 1186
             IF+ G+  ++   +  +    RG +P RYLG+ L+  +L    Y+ L+ +++  ++ W+
Sbjct: 189  EIFLRGLNGTEASTLCAVIGFTRGYLPVRYLGVSLSPVRLTKSDYQPLLDRVKAKINSWT 248

Query: 1185 ANTLSYAGRTELVRSVLQGVECFWLSILPIPAVVRSKIISICRSFLWGS-VNPSVAWSTL 1009
               LSYAGR +LV +V+ G+   W  I  +P     ++  +C  FLWG+     V+W T 
Sbjct: 249  TRYLSYAGRLQLVGTVIYGMVNAWGMIFMLPKFFTKQVDRLCAGFLWGAGTTHRVSWDTC 308

Query: 1008 CLPKSEGGLGLRDFQSWNHALLAKTLWNIQGNKDTLWYKWIHQVYLRGRNIWDWELRRD- 832
            C P+ EGGLGLR    +N     +  W I G+        +  V L G       L    
Sbjct: 309  CRPRKEGGLGLRKIAEFN-----QDPWTIYGS-------LLRYVGLTGPRSLRIPLPSSV 356

Query: 831  ------DSPLFKNLHSIR------DIIVQKCGSQERAAQLLASWNANHRVKGP----NNP 700
                  DS +F  + S R       I      S +  +   A W        P    +  
Sbjct: 357  SQAVAGDSWIFPGVRSDRLQQVLAHISTIPPPSPDGPSD-SALWKYKEEDFRPYFSSSRT 415

Query: 699  YNFFRPHQPEVPWSNVIWSSCIMPKHSFHLWLCKQSRIRTRDRIRWMDV--DKLCVFCGT 526
            +N  R      PWS+++W    +P+H+F  W     R+ T+DR++   +  D  C  C  
Sbjct: 416  WNLTRTVHVIAPWSSIVWFPLAIPRHAFLHWQVMLFRLPTKDRLQQWGITSDATCRLCDG 475

Query: 525  KPETCQHLYFECAFTRAVW 469
            + E+ QHL+F C +   +W
Sbjct: 476  EDESHQHLFFGCTYASHLW 494


>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
            [Arabidopsis thaliana]
          Length = 1164

 Score =  298 bits (762), Expect = 7e-78
 Identities = 156/384 (40%), Positives = 228/384 (59%), Gaps = 6/384 (1%)
 Frame = -2

Query: 1929 LDSLIDEAQAAFVRGRSMIDNIHLMQELLRQYNRKRTTPRCTIKVDLRKAFDSVSWSFLR 1750
            L + I  +Q+AF+ GR  ++N+ L  EL+  YN+K   P   +KVDLRKAFDSV W F+ 
Sbjct: 445  LPAAISHSQSAFMPGRLFLENVLLATELVHGYNKKNIAPSSMLKVDLRKAFDSVRWDFIV 504

Query: 1749 DMLIGLNFPPIFVGWIMECVTTTSYSISINGGLHGIFKGEKGIRQGDPLSPYLFVLCMEY 1570
              L  LN P  F  WI+EC++T S+S+ +NG   G F   KG+RQGDP+SPYLFVL ME 
Sbjct: 505  SALRALNVPEKFTCWILECLSTASFSVILNGHSAGHFWSSKGLRQGDPMSPYLFVLAMEV 564

Query: 1569 FSRLLRMKTTNSHFNYHPKCGLLKITHLVYADDLMLLSRGDPISIRILMDCLKDFGHKSG 1390
            FS LL+ + T+ +  YHPK   L+I+HL++ADD+M+   G   S+  +++ L+DF   SG
Sbjct: 565  FSGLLQSRYTSGYIAYHPKTSQLEISHLMFADDVMIFFDGKSSSLHGIVESLEDFAGWSG 624

Query: 1389 MNMNISKSNIFMAGICESDTRQILDLSQLARGTMPFRYLGIPLAAEKLKVVYYEELVGKI 1210
            + MN +K+ ++ AG+ +S++  +        G++P RYLG+PL + KL +  Y  L+ KI
Sbjct: 625  LLMNTNKTQLYHAGLSQSESDSMASYG-FKLGSLPVRYLGLPLMSRKLTIAEYAPLIEKI 683

Query: 1209 RTYVDGWSANTLSYAGRTELVRSVLQGVECFWLSILPIPAVVRSKIISICRSFLWGS--- 1039
                + W    LS+AGR +L+ SV+ G+  FW+S   +P     KI S+C  FLW S   
Sbjct: 684  TARFNSWVVRLLSFAGRVQLLASVISGIVNFWISSFILPLGCIKKIESLCSRFLWSSRID 743

Query: 1038 --VNPSVAWSTLCLPKSEGGLGLRDFQSWNHALLAKTLWNIQGNKDTLWYKWIHQVYL-R 868
                  VAWS +CLPK+EGG+GLR F   N  L  + +W +  N  +LW  W  Q  L +
Sbjct: 744  KKGIAKVAWSQVCLPKAEGGIGLRRFAVSNRTLYLRMIWLLFSNSGSLWVAWHKQHSLGK 803

Query: 867  GRNIWDWELRRDDSPLFKNLHSIR 796
              + W+   +  DS  +K L  +R
Sbjct: 804  STSFWNQPEKPHDSWNWKCLLRLR 827



 Score = 64.3 bits (155), Expect = 2e-07
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
 Frame = -2

Query: 699  YNFFRPHQPEVPWSNVIWSSCIMPKHSFHLWLCKQSRIRTRDRI-RW-MDVDKLCVFCGT 526
            ++  RP    VPW+  +W     PKH+FHLW     R+ T+ R+  W M +D  C  C  
Sbjct: 936  WSALRPSSAPVPWARAVWFKGATPKHAFHLWTAHLDRLPTKVRLASWGMQIDTTCGLCSL 995

Query: 525  KPETCQHLYFECAF 484
             PET  HL+  C F
Sbjct: 996  HPETRDHLFLSCDF 1009


>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1277

 Score =  296 bits (757), Expect = 3e-77
 Identities = 144/408 (35%), Positives = 232/408 (56%), Gaps = 6/408 (1%)
 Frame = -2

Query: 1932 VLDSLIDEAQAAFVRGRSMIDNIHLMQELLRQYNRKRTTPRCTIKVDLRKAFDSVSWSFL 1753
            +L + I + Q+AFVR R +++N+ L  EL++ Y++   +PRC +K+D+ KAFDSV W FL
Sbjct: 695  MLPTFILQNQSAFVRERLLMENVLLATELVKDYHKDSISPRCAMKIDISKAFDSVQWQFL 754

Query: 1752 RDMLIGLNFPPIFVGWIMECVTTTSYSISINGGLHGIFKGEKGIRQGDPLSPYLFVLCME 1573
             + L  L FP  F  WI  C++T ++S+ +N    G F  ++G+RQG  LSPYLFV+CM 
Sbjct: 755  LNTLEALKFPEKFRHWIKLCISTATFSVQVNSEQAGFFGSKRGLRQGCALSPYLFVICMN 814

Query: 1572 YFSRLLRMKTTNSHFNYHPKCGLLKITHLVYADDLMLLSRGDPISIRILMDCLKDFGHKS 1393
              S ++ +   + +  YHPKC  L +THL +ADDLM+   G   S+  +++  KDF  KS
Sbjct: 815  VLSHMIDVAAVHRNIGYHPKCKKLSLTHLCFADDLMVFIDGQQRSVEGVINIFKDFAGKS 874

Query: 1392 GMNMNISKSNIFMAGICESDTRQILDLSQLARGTMPFRYLGIPLAAEKLKVVYYEELVGK 1213
            G+++++ KS +++A + E +   IL     A G +P RYLG PL  +++    Y  L+ K
Sbjct: 875  GLHISLEKSTLYLAEVSELNRNNILSAFPFASGQLPVRYLGFPLLTKQMTTADYSPLLDK 934

Query: 1212 IRTYVDGWSANTLSYAGRTELVRSVLQGVECFWLSILPIPAVVRSKIISICRSFLWG--S 1039
            +R+ +  W+A +LSYAGR  L+ SV+  +  FW+S   +PA    +I  +C +FLW    
Sbjct: 935  VRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAFLWSGPE 994

Query: 1038 VNP---SVAWSTLCLPKSEGGLGLRDFQSWNHALLAKTLWNIQGNKDTLWYKWIHQVYLR 868
            +NP    + W++LC  K EGGLG++     N     K +W +   + +LW  W+    +R
Sbjct: 995  LNPKKAKITWTSLCKLKQEGGLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNWVWTYIIR 1054

Query: 867  GRNIWDWELRRD-DSPLFKNLHSIRDIIVQKCGSQERAAQLLASWNAN 727
              + W    R    S ++K L + RD+    C  + ++    + W  N
Sbjct: 1055 KGSFWSANDRSSLGSWMWKKLLNYRDVAKSMCKVEIKSGSSTSFWYDN 1102


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  294 bits (752), Expect = 1e-76
 Identities = 141/366 (38%), Positives = 215/366 (58%), Gaps = 5/366 (1%)
 Frame = -2

Query: 1932 VLDSLIDEAQAAFVRGRSMIDNIHLMQELLRQYNRKRTTPRCTIKVDLRKAFDSVSWSFL 1753
            VL   I   Q+AFV+ R +I+N+ L  EL++ Y++   + RC IK+D+ KAFDSV W FL
Sbjct: 553  VLPKFIAGNQSAFVKDRLLIENLLLATELVKDYHKDTISTRCAIKIDISKAFDSVQWPFL 612

Query: 1752 RDMLIGLNFPPIFVGWIMECVTTTSYSISINGGLHGIFKGEKGIRQGDPLSPYLFVLCME 1573
             ++   L FP  F+ WI  C+TT S+S+ +NG L G F+  +G+RQG  LSPYLFV+CM+
Sbjct: 613  INVFTILGFPREFIHWINICITTASFSVQVNGELAGYFQSSRGLRQGCALSPYLFVICMD 672

Query: 1572 YFSRLLRMKTTNSHFNYHPKCGLLKITHLVYADDLMLLSRGDPISIRILMDCLKDFGHKS 1393
              S++L       HF YHPKC  + +THL +ADDLM+LS G   SI  ++    +F   S
Sbjct: 673  VLSKMLDKAAAARHFGYHPKCKTMGLTHLSFADDLMVLSDGKIRSIERIIKVFDEFAKWS 732

Query: 1392 GMNMNISKSNIFMAGICESDTRQILDLSQLARGTMPFRYLGIPLAAEKLKVVYYEELVGK 1213
            G+ +++ KS +++AG+  +   ++ D    + G +P RYLG+PL  ++L       L+ +
Sbjct: 733  GLRISLEKSTVYLAGLSATARNEVADRFPFSSGQLPVRYLGLPLITKRLSTTDCLPLLEQ 792

Query: 1212 IRTYVDGWSANTLSYAGRTELVRSVLQGVECFWLSILPIPAVVRSKIISICRSFLW---- 1045
            +R  +  W++  LSYAGR  L+ SVL  +  FWL+   +P     ++  +C +FLW    
Sbjct: 793  VRKRIGSWTSRFLSYAGRLNLISSVLWSICNFWLAAFRLPRKCIRELEKMCSAFLWSGTE 852

Query: 1044 -GSVNPSVAWSTLCLPKSEGGLGLRDFQSWNHALLAKTLWNIQGNKDTLWYKWIHQVYLR 868
              S    ++W  +C PK EGGLGLR  +  N     K +W I  + ++LW KW+ Q  LR
Sbjct: 853  MNSNKAKISWHMVCKPKDEGGLGLRSLKEANDVCCLKLVWKIVSHSNSLWVKWVDQHLLR 912

Query: 867  GRNIWD 850
              + W+
Sbjct: 913  NASFWE 918



 Score = 74.7 bits (182), Expect = 1e-10
 Identities = 46/132 (34%), Positives = 62/132 (46%), Gaps = 6/132 (4%)
 Frame = -2

Query: 687  RPHQPEVPWSNVIWSSCIMPKHSFHLWLCKQSRIRTRDR-IRWMD-VDKLCVFCGTKPET 514
            R     VPW  VIW S   PK+SF  WL    R+ T DR I W + +   C+FC    ET
Sbjct: 1048 RSTSARVPWHKVIWFSHATPKYSFCSWLAAHGRLPTGDRMINWANGIATDCIFCQGTLET 1107

Query: 513  CQHLYFECAFTRAVWTGIRGWIGIDRQMTTFSSAIKWLKKEAKGTSWHSRGQ----KIAF 346
              HL+F C+FT  +W  +   I   +  + + S I     EA   S H R +    +  F
Sbjct: 1108 RDHLFFTCSFTSVIWVDLARGIFKTQYTSHWQSII-----EAITNSQHHRVEWFLRRYVF 1162

Query: 345  ATTVYQLWNARN 310
              T+Y +W  RN
Sbjct: 1163 QATIYIVWRERN 1174