BLASTX nr result
ID: Rehmannia25_contig00002511
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00002511
(360 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ13473.1| hypothetical protein PRUPE_ppa013712mg [Prunus pe... 67 2e-09
ref|NP_001235677.1| uncharacterized protein LOC100527666 [Glycin... 65 1e-08
gb|AFK47048.1| unknown [Lotus japonicus] 64 3e-08
ref|XP_003599257.1| Photosystem II 5 kDa protein [Medicago trunc... 63 4e-08
ref|XP_002314076.1| photosystem II 5 kD family protein [Populus ... 62 6e-08
ref|XP_006369585.1| hypothetical protein POPTR_0001s26410g [Popu... 62 8e-08
sp|P31336.1|PST2_GOSHI RecName: Full=Photosystem II 5 kDa protei... 62 8e-08
ref|XP_004291777.1| PREDICTED: photosystem II 5 kDa protein, chl... 60 3e-07
ref|NP_001238741.1| uncharacterized protein LOC100305919 [Glycin... 60 3e-07
ref|XP_004143237.1| PREDICTED: photosystem II 5 kDa protein, chl... 60 4e-07
ref|XP_002298398.1| predicted protein [Populus trichocarpa] gi|1... 60 4e-07
ref|XP_006304787.1| hypothetical protein CARUB_v10012335mg [Caps... 59 7e-07
gb|AAM61462.1| photosystem II [Arabidopsis thaliana] 59 7e-07
gb|EOX96667.1| Photosystem II 5 kDa protein, chloroplastic [Theo... 59 9e-07
gb|AFK48333.1| unknown [Medicago truncatula] 58 1e-06
ref|XP_006598270.1| PREDICTED: photosystem II 5 kDa protein, chl... 58 1e-06
ref|NP_564589.1| photosystem II 5 kD protein [Arabidopsis thalia... 58 1e-06
ref|XP_006446137.1| hypothetical protein CICLE_v10017247mg [Citr... 57 2e-06
ref|XP_002894313.1| photosystem II 5 kD protein [Arabidopsis lyr... 57 2e-06
gb|ESW03384.1| hypothetical protein PHAVU_011G009700g [Phaseolus... 57 3e-06
>gb|EMJ13473.1| hypothetical protein PRUPE_ppa013712mg [Prunus persica]
Length = 107
Score = 67.4 bits (163), Expect = 2e-09
Identities = 32/52 (61%), Positives = 35/52 (67%)
Frame = +1
Query: 1 GRRELMFXXXXXXXXXXXXXXXXDEPKRGSAEAKKKYAPICVTMPTARICRN 156
GRR+LMF DEPKRGS EAK+KYAP+CVTMPTARICRN
Sbjct: 56 GRRDLMFAAAAAAACSIAKAAMADEPKRGSKEAKEKYAPVCVTMPTARICRN 107
>ref|NP_001235677.1| uncharacterized protein LOC100527666 [Glycine max]
gi|255632908|gb|ACU16808.1| unknown [Glycine max]
Length = 104
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/52 (61%), Positives = 33/52 (63%)
Frame = +1
Query: 1 GRRELMFXXXXXXXXXXXXXXXXDEPKRGSAEAKKKYAPICVTMPTARICRN 156
GRR LMF DEPK G+ EAKKKYAPICVTMPTARICRN
Sbjct: 53 GRRNLMFAAAAAAVCSVAGMAVADEPKPGTPEAKKKYAPICVTMPTARICRN 104
>gb|AFK47048.1| unknown [Lotus japonicus]
Length = 107
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/51 (58%), Positives = 32/51 (62%)
Frame = +1
Query: 1 GRRELMFXXXXXXXXXXXXXXXXDEPKRGSAEAKKKYAPICVTMPTARICR 153
GRR LMF DEPK GS EAKKKYAP+CVTMPTAR+CR
Sbjct: 52 GRRNLMFVSAAAAVCSVAGIALADEPKNGSPEAKKKYAPVCVTMPTARVCR 102
>ref|XP_003599257.1| Photosystem II 5 kDa protein [Medicago truncatula]
gi|355488305|gb|AES69508.1| Photosystem II 5 kDa protein
[Medicago truncatula]
Length = 106
Score = 63.2 bits (152), Expect = 4e-08
Identities = 32/53 (60%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Frame = +1
Query: 1 GRRELMFXXXXXXXXXXXXXXXXDE-PKRGSAEAKKKYAPICVTMPTARICRN 156
GRR+LMF DE PKRG+ EAKKKYAP+CVTMPTARICRN
Sbjct: 54 GRRDLMFAAAAAAVSTFAGVAMADEEPKRGTPEAKKKYAPVCVTMPTARICRN 106
>ref|XP_002314076.1| photosystem II 5 kD family protein [Populus trichocarpa]
gi|222850484|gb|EEE88031.1| photosystem II 5 kD family
protein [Populus trichocarpa]
Length = 105
Score = 62.4 bits (150), Expect = 6e-08
Identities = 32/53 (60%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Frame = +1
Query: 1 GRRELMFXXXXXXXXXXXXXXXXDE-PKRGSAEAKKKYAPICVTMPTARICRN 156
GRR+LMF DE P+RG+ EAKKKYAPICVTMPTARICRN
Sbjct: 53 GRRDLMFAAAAAAAYSIARVAIADEEPRRGTPEAKKKYAPICVTMPTARICRN 105
>ref|XP_006369585.1| hypothetical protein POPTR_0001s26410g [Populus trichocarpa]
gi|550348232|gb|ERP66154.1| hypothetical protein
POPTR_0001s26410g [Populus trichocarpa]
Length = 110
Score = 62.0 bits (149), Expect = 8e-08
Identities = 32/53 (60%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Frame = +1
Query: 1 GRRELMFXXXXXXXXXXXXXXXXDE-PKRGSAEAKKKYAPICVTMPTARICRN 156
GRR+LMF DE P+RG+ EAKKKYAPICVTMPTARICRN
Sbjct: 10 GRRDLMFAAAAAAAYSIARVAIADEEPERGTPEAKKKYAPICVTMPTARICRN 62
>sp|P31336.1|PST2_GOSHI RecName: Full=Photosystem II 5 kDa protein, chloroplastic;
Short=PSII-T; AltName: Full=Light-regulated unknown 11
kDa protein; Flags: Precursor gi|18512|emb|CAA38027.1|
hypothetical protein [Gossypium hirsutum]
Length = 105
Score = 62.0 bits (149), Expect = 8e-08
Identities = 32/52 (61%), Positives = 34/52 (65%)
Frame = +1
Query: 1 GRRELMFXXXXXXXXXXXXXXXXDEPKRGSAEAKKKYAPICVTMPTARICRN 156
GRRE+MF EPKRGSAEAKK YAP+CVTMPTARICRN
Sbjct: 55 GRREMMFAAAAAAICSVAGVATA-EPKRGSAEAKKAYAPVCVTMPTARICRN 105
>ref|XP_004291777.1| PREDICTED: photosystem II 5 kDa protein, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 104
Score = 60.1 bits (144), Expect = 3e-07
Identities = 28/51 (54%), Positives = 33/51 (64%)
Frame = +1
Query: 1 GRRELMFXXXXXXXXXXXXXXXXDEPKRGSAEAKKKYAPICVTMPTARICR 153
GRR+L+F DEP+RG+ AKKKYAP+CVTMPTARICR
Sbjct: 53 GRRDLIFAAAAAAACSIAKVAMADEPERGTPAAKKKYAPVCVTMPTARICR 103
>ref|NP_001238741.1| uncharacterized protein LOC100305919 [Glycine max]
gi|255626973|gb|ACU13831.1| unknown [Glycine max]
Length = 101
Score = 60.1 bits (144), Expect = 3e-07
Identities = 29/52 (55%), Positives = 32/52 (61%)
Frame = +1
Query: 1 GRRELMFXXXXXXXXXXXXXXXXDEPKRGSAEAKKKYAPICVTMPTARICRN 156
GRR LMF DEPK G++EAKKKYAP+CVT PTA ICRN
Sbjct: 50 GRRNLMFAVAAAAVPSVAGMAVADEPKPGTSEAKKKYAPVCVTNPTASICRN 101
>ref|XP_004143237.1| PREDICTED: photosystem II 5 kDa protein, chloroplastic-like
[Cucumis sativus]
Length = 106
Score = 59.7 bits (143), Expect = 4e-07
Identities = 30/51 (58%), Positives = 32/51 (62%)
Frame = +1
Query: 1 GRRELMFXXXXXXXXXXXXXXXXDEPKRGSAEAKKKYAPICVTMPTARICR 153
GRREL+ DEP RGS EAK+KYAPICVTMPTARICR
Sbjct: 55 GRRELVAAAVTVAAATLAKAAMADEPARGSPEAKQKYAPICVTMPTARICR 105
>ref|XP_002298398.1| predicted protein [Populus trichocarpa] gi|118487685|gb|ABK95667.1|
unknown [Populus trichocarpa]
gi|118488853|gb|ABK96236.1| unknown [Populus trichocarpa
x Populus deltoides] gi|118488867|gb|ABK96243.1| unknown
[Populus trichocarpa x Populus deltoides]
gi|118489821|gb|ABK96710.1| unknown [Populus trichocarpa
x Populus deltoides] gi|118489889|gb|ABK96742.1| unknown
[Populus trichocarpa x Populus deltoides]
Length = 105
Score = 59.7 bits (143), Expect = 4e-07
Identities = 31/52 (59%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = +1
Query: 1 GRRELMFXXXXXXXXXXXXXXXXDE-PKRGSAEAKKKYAPICVTMPTARICR 153
GRR+LMF DE P+RG+ EAKKKYAPICVTMPTARICR
Sbjct: 53 GRRDLMFAAAAAAAYSIARVAIADEEPERGTPEAKKKYAPICVTMPTARICR 104
>ref|XP_006304787.1| hypothetical protein CARUB_v10012335mg [Capsella rubella]
gi|482573498|gb|EOA37685.1| hypothetical protein
CARUB_v10012335mg [Capsella rubella]
Length = 106
Score = 58.9 bits (141), Expect = 7e-07
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = +1
Query: 70 DEPKRGSAEAKKKYAPICVTMPTARICRN 156
DEPKRG+ AKKKYAP+CVTMPTARICRN
Sbjct: 78 DEPKRGTEAAKKKYAPVCVTMPTARICRN 106
>gb|AAM61462.1| photosystem II [Arabidopsis thaliana]
Length = 106
Score = 58.9 bits (141), Expect = 7e-07
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = +1
Query: 70 DEPKRGSAEAKKKYAPICVTMPTARICRN 156
DEPKRG+ AKKKYAP+CVTMPTARICRN
Sbjct: 78 DEPKRGTEAAKKKYAPVCVTMPTARICRN 106
>gb|EOX96667.1| Photosystem II 5 kDa protein, chloroplastic [Theobroma cacao]
Length = 106
Score = 58.5 bits (140), Expect = 9e-07
Identities = 29/50 (58%), Positives = 31/50 (62%)
Frame = +1
Query: 1 GRRELMFXXXXXXXXXXXXXXXXDEPKRGSAEAKKKYAPICVTMPTARIC 150
GRRELMF DEPK G+ EA+K YAPICVTMPTARIC
Sbjct: 55 GRRELMFAAAAAAVCSVAGVAAADEPKPGTPEARKVYAPICVTMPTARIC 104
>gb|AFK48333.1| unknown [Medicago truncatula]
Length = 108
Score = 58.2 bits (139), Expect = 1e-06
Identities = 30/52 (57%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = +1
Query: 1 GRRELMFXXXXXXXXXXXXXXXX-DEPKRGSAEAKKKYAPICVTMPTARICR 153
GRR +MF DEPKRGS EAKK YAP+CVTMPTARICR
Sbjct: 56 GRRNIMFAAAAAAVCSVAGMALAADEPKRGSPEAKKAYAPVCVTMPTARICR 107
>ref|XP_006598270.1| PREDICTED: photosystem II 5 kDa protein, chloroplastic-like
[Glycine max]
Length = 133
Score = 57.8 bits (138), Expect = 1e-06
Identities = 31/53 (58%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +1
Query: 1 GRRELMFXXXXXXXXXXXXXXXX-DEPKRGSAEAKKKYAPICVTMPTARICRN 156
GRR LMF DEPK G+ AKKKYAPICVTMPTARICRN
Sbjct: 81 GRRNLMFAAAAAAAVCSVAGMAVADEPKPGTPAAKKKYAPICVTMPTARICRN 133
>ref|NP_564589.1| photosystem II 5 kD protein [Arabidopsis thaliana]
gi|4836947|gb|AAD30649.1|AC006085_22 Putative
photosystem II 5 KD protein [Arabidopsis thaliana]
gi|12325362|gb|AAG52621.1|AC024261_8 unknown protein;
88255-88575 [Arabidopsis thaliana]
gi|14326535|gb|AAK60312.1|AF385721_1 At1g51400/F5D21_10
[Arabidopsis thaliana] gi|15215584|gb|AAK91337.1|
At1g51400/F5D21_10 [Arabidopsis thaliana]
gi|22137316|gb|AAM91503.1| At1g51400/F5D21_10
[Arabidopsis thaliana] gi|332194541|gb|AEE32662.1|
photosystem II 5 kD protein [Arabidopsis thaliana]
Length = 106
Score = 57.8 bits (138), Expect = 1e-06
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +1
Query: 70 DEPKRGSAEAKKKYAPICVTMPTARICRN 156
DEPKRG+ AKKKYAP+CVTMPTA+ICRN
Sbjct: 78 DEPKRGTEAAKKKYAPVCVTMPTAKICRN 106
>ref|XP_006446137.1| hypothetical protein CICLE_v10017247mg [Citrus clementina]
gi|568832832|ref|XP_006470630.1| PREDICTED: photosystem
II 5 kDa protein, chloroplastic-like [Citrus sinensis]
gi|557548748|gb|ESR59377.1| hypothetical protein
CICLE_v10017247mg [Citrus clementina]
Length = 111
Score = 57.4 bits (137), Expect = 2e-06
Identities = 29/53 (54%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Frame = +1
Query: 1 GRRELMFXXXXXXXXXXXXXXXXD--EPKRGSAEAKKKYAPICVTMPTARICR 153
GRREL+F + EPKRG+ +AKKKYAP+CVTMPTARICR
Sbjct: 58 GRRELVFAAAAAAACSIAKVAMAESEEPKRGTPDAKKKYAPVCVTMPTARICR 110
>ref|XP_002894313.1| photosystem II 5 kD protein [Arabidopsis lyrata subsp. lyrata]
gi|297340155|gb|EFH70572.1| photosystem II 5 kD protein
[Arabidopsis lyrata subsp. lyrata]
Length = 106
Score = 57.4 bits (137), Expect = 2e-06
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +1
Query: 70 DEPKRGSAEAKKKYAPICVTMPTARICRN 156
+EPKRG+ AKKKYAP+CVTMPTARICRN
Sbjct: 78 EEPKRGTEAAKKKYAPVCVTMPTARICRN 106
>gb|ESW03384.1| hypothetical protein PHAVU_011G009700g [Phaseolus vulgaris]
Length = 106
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/50 (56%), Positives = 30/50 (60%)
Frame = +1
Query: 1 GRRELMFXXXXXXXXXXXXXXXXDEPKRGSAEAKKKYAPICVTMPTARIC 150
GRR +MF DEPKRG+ EAKK Y PICVTMPTARIC
Sbjct: 55 GRRNMMFAAAAAAVCSVAGMSMADEPKRGTPEAKKIYYPICVTMPTARIC 104