BLASTX nr result
ID: Rehmannia25_contig00002412
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00002412
(4237 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II su... 2103 0.0
ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II su... 2102 0.0
ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su... 2085 0.0
ref|XP_006828844.1| hypothetical protein AMTR_s00001p00152770 [A... 2045 0.0
ref|XP_006659128.1| PREDICTED: DNA-directed RNA polymerase II su... 2040 0.0
gb|EMJ04257.1| hypothetical protein PRUPE_ppa000093mg [Prunus pe... 2038 0.0
gb|EXC35292.1| DNA-directed RNA polymerase II subunit rpb1 [Moru... 2034 0.0
ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II su... 2027 0.0
ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 2027 0.0
ref|XP_004287766.1| PREDICTED: DNA-directed RNA polymerase II su... 2026 0.0
ref|XP_004972809.1| PREDICTED: DNA-directed RNA polymerase II su... 2024 0.0
ref|XP_004972810.1| PREDICTED: DNA-directed RNA polymerase II su... 2022 0.0
gb|EOX90745.1| DNA-directed RNA polymerase II subunit RPB1 isofo... 2019 0.0
gb|EOX90744.1| DNA-directed RNA polymerase II subunit RPB1 isofo... 2019 0.0
gb|EOX90741.1| DNA-directed RNA polymerase II subunit RPB1 isofo... 2019 0.0
ref|XP_006467031.1| PREDICTED: DNA-directed RNA polymerase II su... 2018 0.0
ref|XP_006467030.1| PREDICTED: DNA-directed RNA polymerase II su... 2018 0.0
ref|XP_006467029.1| PREDICTED: DNA-directed RNA polymerase II su... 2018 0.0
ref|XP_006467027.1| PREDICTED: DNA-directed RNA polymerase II su... 2018 0.0
ref|XP_006425357.1| hypothetical protein CICLE_v10024686mg [Citr... 2018 0.0
>ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1 [Solanum
lycopersicum]
Length = 1846
Score = 2103 bits (5448), Expect = 0.0
Identities = 1046/1104 (94%), Positives = 1079/1104 (97%)
Frame = -2
Query: 4236 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 4057
KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN
Sbjct: 433 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 492
Query: 4056 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 3877
ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRK+TKRDT
Sbjct: 493 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKVTKRDT 552
Query: 3876 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQENE 3697
FIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQINLLRYSAWH ++E
Sbjct: 553 FIEKDVFMNILMWWEDFDGKVPAPVILKPRPLWTGKQVFNLIIPKQINLLRYSAWHNDSE 612
Query: 3696 KGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 3517
KG+ITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 613 KGYITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 672
Query: 3516 YWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTMMESF 3337
YWLLQ AFSIGIGDTIADA+TMEKINETISNAK +VKELI+AAQEK LEAEPGRTMMESF
Sbjct: 673 YWLLQQAFSIGIGDTIADASTMEKINETISNAKAKVKELIKAAQEKLLEAEPGRTMMESF 732
Query: 3336 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 3157
ENRVNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 733 ENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 792
Query: 3156 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 2977
IPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 793 IPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 852
Query: 2976 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLKRTDFN 2797
GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIE+Q L+SLK K+ F+
Sbjct: 853 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIETQKLDSLKAKKGTFD 912
Query: 2796 DMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNS 2617
DMY YEID+PNWNP+YMLPEAVEDLK IREIRSVFDAEVQKLEADR QLGTEIA TGDNS
Sbjct: 913 DMYAYEIDDPNWNPSYMLPEAVEDLKGIREIRSVFDAEVQKLEADRHQLGTEIAVTGDNS 972
Query: 2616 WPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQKN 2437
WPLPVNI+RLVLNAQKTFK+DFRRPSDMHPMEIVEAVDKLQERLKVV GDDYLSMEAQKN
Sbjct: 973 WPLPVNIQRLVLNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVPGDDYLSMEAQKN 1032
Query: 2436 ATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSIG 2257
ATLFFNILLRSALASKRVLKEYRL+REAFEWV+GEIESRFLQSLVA GEMIGCVAAQSIG
Sbjct: 1033 ATLFFNILLRSALASKRVLKEYRLSREAFEWVVGEIESRFLQSLVAPGEMIGCVAAQSIG 1092
Query: 2256 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKN 2077
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKP+V KTKERAK
Sbjct: 1093 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVGKTKERAKT 1152
Query: 2076 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 1897
VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI
Sbjct: 1153 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 1212
Query: 1896 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDE 1717
ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL DE
Sbjct: 1213 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL-DE 1271
Query: 1716 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGVN 1537
SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSK+ KFD+N+GFKAENEWMLDTEGVN
Sbjct: 1272 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKAENEWMLDTEGVN 1331
Query: 1536 LLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILC 1357
LLAVM HEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILC
Sbjct: 1332 LLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILC 1391
Query: 1356 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLGQ 1177
DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAE+D LRGVTENIMLGQ
Sbjct: 1392 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDHLRGVTENIMLGQ 1451
Query: 1176 LAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGTPYHDGMMSPNYL 997
LAPIGTG C+L LNEEMLKQAIEIPLPSYMEGGL+FGMTP RSP++GTPYHDGMMSPNYL
Sbjct: 1452 LAPIGTGGCSLYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGTPYHDGMMSPNYL 1511
Query: 996 LSPNLRLSPVTDAQFSPYVGGMAF 925
LSPN+R+SP+TDAQFSPYVGGMAF
Sbjct: 1512 LSPNMRMSPITDAQFSPYVGGMAF 1535
>ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Solanum
tuberosum]
Length = 1839
Score = 2102 bits (5446), Expect = 0.0
Identities = 1045/1104 (94%), Positives = 1079/1104 (97%)
Frame = -2
Query: 4236 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 4057
KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN
Sbjct: 433 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 492
Query: 4056 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 3877
ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRK+TKRDT
Sbjct: 493 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKVTKRDT 552
Query: 3876 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQENE 3697
FIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQINLLRYSAWH ++E
Sbjct: 553 FIEKDVFMNILMWWEDFDGKVPAPVILKPRPLWTGKQVFNLIIPKQINLLRYSAWHNDSE 612
Query: 3696 KGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 3517
KG+ITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 613 KGYITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 672
Query: 3516 YWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTMMESF 3337
YWLLQ AFSIGIGDTIADA+TMEKINETISNAK +VKELI+AAQEK LEAEPGRTMMESF
Sbjct: 673 YWLLQQAFSIGIGDTIADASTMEKINETISNAKAKVKELIKAAQEKLLEAEPGRTMMESF 732
Query: 3336 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 3157
ENRVNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 733 ENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 792
Query: 3156 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 2977
IPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 793 IPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 852
Query: 2976 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLKRTDFN 2797
GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIE+Q L+SLK K+ F+
Sbjct: 853 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIETQKLDSLKAKKGTFD 912
Query: 2796 DMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNS 2617
DMY YEID+PNWNP+YMLPEAVEDLK IREIRSVFDAEVQKLEADR QLGTEIA TGDNS
Sbjct: 913 DMYAYEIDDPNWNPSYMLPEAVEDLKGIREIRSVFDAEVQKLEADRHQLGTEIAVTGDNS 972
Query: 2616 WPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQKN 2437
WPLPVNI+RLVLNAQKTFK+DFRRPSDMHPMEIVEAVDKLQERLKVV GDDYLSMEAQKN
Sbjct: 973 WPLPVNIQRLVLNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVPGDDYLSMEAQKN 1032
Query: 2436 ATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSIG 2257
ATLFFNILLRSALASKRVLKEYRL+REAFEWV+GEIESRFLQSLVA GEMIGCVAAQSIG
Sbjct: 1033 ATLFFNILLRSALASKRVLKEYRLSREAFEWVVGEIESRFLQSLVAPGEMIGCVAAQSIG 1092
Query: 2256 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKN 2077
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKP+V KTKERAK
Sbjct: 1093 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVGKTKERAKT 1152
Query: 2076 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 1897
VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI
Sbjct: 1153 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 1212
Query: 1896 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDE 1717
ELNREMMVDKKLSMADIAEKIN+EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL DE
Sbjct: 1213 ELNREMMVDKKLSMADIAEKINVEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL-DE 1271
Query: 1716 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGVN 1537
SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSK+ KFD+N+GFKAENEWMLDTEGVN
Sbjct: 1272 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKAENEWMLDTEGVN 1331
Query: 1536 LLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILC 1357
LLAVM HEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILC
Sbjct: 1332 LLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILC 1391
Query: 1356 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLGQ 1177
DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAE+D LRGVTENIMLGQ
Sbjct: 1392 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDHLRGVTENIMLGQ 1451
Query: 1176 LAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGTPYHDGMMSPNYL 997
LAPIGTG C+L LNEEMLKQAIEIPLPSYMEGGL+FGMTP RSP++GTPYHDGMMSPNYL
Sbjct: 1452 LAPIGTGSCSLYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGTPYHDGMMSPNYL 1511
Query: 996 LSPNLRLSPVTDAQFSPYVGGMAF 925
LSPN+R+SP+TDAQFSPYVGGMAF
Sbjct: 1512 LSPNMRMSPITDAQFSPYVGGMAF 1535
>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Vitis
vinifera]
Length = 1848
Score = 2085 bits (5403), Expect = 0.0
Identities = 1034/1104 (93%), Positives = 1075/1104 (97%)
Frame = -2
Query: 4236 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 4057
KSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN
Sbjct: 433 KSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 492
Query: 4056 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 3877
ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDT
Sbjct: 493 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDT 552
Query: 3876 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQENE 3697
FIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQINLLR SAWH E+E
Sbjct: 553 FIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSESE 612
Query: 3696 KGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 3517
GFITPGDTQVRIEKGELL+GTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 613 TGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 672
Query: 3516 YWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTMMESF 3337
YWLLQN FSIGIGDTIADAATMEKINETIS AKNEVKELIRAAQE+QLEAEPGRTMMESF
Sbjct: 673 YWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQLEAEPGRTMMESF 732
Query: 3336 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 3157
ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 733 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 792
Query: 3156 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 2977
IP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 793 IPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 852
Query: 2976 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLKRTDFN 2797
GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+Q L+SLK+K+ +F+
Sbjct: 853 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQKLDSLKMKKGEFD 912
Query: 2796 DMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNS 2617
++KYEID+ NWNP+YMLPE VEDLKTIRE R+VFDAEVQKLEADRFQLGTEIATTGDNS
Sbjct: 913 RVFKYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRFQLGTEIATTGDNS 972
Query: 2616 WPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQKN 2437
WP+PVN+KRL+ NAQKTFKVD RRPSDMHPMEIVEAVDKLQERLKVV GDD +SMEAQKN
Sbjct: 973 WPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVPGDDLISMEAQKN 1032
Query: 2436 ATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSIG 2257
ATLFFNILLRS ASKRVLKEYRLTREAFEWVIGEIESRFLQSLVA GEMIGCVAAQSIG
Sbjct: 1033 ATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 1092
Query: 2256 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKN 2077
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKN
Sbjct: 1093 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKN 1152
Query: 2076 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 1897
VQCALEYTTLRSVTQATEVWYDPDPMST+IEEDV+FVKSYYEMPDEE+ P+KISPWLLRI
Sbjct: 1153 VQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEVAPEKISPWLLRI 1212
Query: 1896 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDE 1717
ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL DE
Sbjct: 1213 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELQDE 1272
Query: 1716 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGVN 1537
SAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K+NKFDE++GFK E EWMLDTEGVN
Sbjct: 1273 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDESEGFKPEVEWMLDTEGVN 1332
Query: 1536 LLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILC 1357
LLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILC
Sbjct: 1333 LLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILC 1392
Query: 1356 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLGQ 1177
DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETD LRGVTENIMLGQ
Sbjct: 1393 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDFLRGVTENIMLGQ 1452
Query: 1176 LAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGTPYHDGMMSPNYL 997
LAPIGTGDCAL LN++ML+ AIE+ LPSYME GLDFGMTP+RSP+TGTPYHDGMMSPNYL
Sbjct: 1453 LAPIGTGDCALYLNDQMLQHAIELQLPSYME-GLDFGMTPSRSPITGTPYHDGMMSPNYL 1511
Query: 996 LSPNLRLSPVTDAQFSPYVGGMAF 925
LSPNLRLSP+TDAQFSPYVGGMAF
Sbjct: 1512 LSPNLRLSPITDAQFSPYVGGMAF 1535
>ref|XP_006828844.1| hypothetical protein AMTR_s00001p00152770 [Amborella trichopoda]
gi|548833823|gb|ERM96260.1| hypothetical protein
AMTR_s00001p00152770 [Amborella trichopoda]
Length = 1844
Score = 2045 bits (5298), Expect = 0.0
Identities = 1014/1104 (91%), Positives = 1065/1104 (96%)
Frame = -2
Query: 4236 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 4057
KS D HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN
Sbjct: 436 KSGDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 495
Query: 4056 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 3877
ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDT
Sbjct: 496 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDT 555
Query: 3876 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQENE 3697
FIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQINL+RYSAWH E+E
Sbjct: 556 FIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQINLIRYSAWHSESE 615
Query: 3696 KGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 3517
GFITPGDT VRIE+GELLSGTLCKKTLGTS+GSLIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 616 SGFITPGDTCVRIERGELLSGTLCKKTLGTSSGSLIHVIWEEVGPDAARKFLGHTQWLVN 675
Query: 3516 YWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTMMESF 3337
YWLLQ AFSIGIGDTIADAATMEKINETIS AKNEVKELI+AAQEKQLEAEPGRTMMESF
Sbjct: 676 YWLLQQAFSIGIGDTIADAATMEKINETISKAKNEVKELIKAAQEKQLEAEPGRTMMESF 735
Query: 3336 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 3157
ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 736 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 795
Query: 3156 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 2977
IPFGF DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 796 IPFGFNDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 855
Query: 2976 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLKRTDFN 2797
GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ L+SLK+KR +F
Sbjct: 856 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKRAEFE 915
Query: 2796 DMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNS 2617
++YKYEID NW+P+YMLPE VEDLKTIRE ++VFDAEVQKLEADR QLGTEI TTGDNS
Sbjct: 916 NVYKYEIDQENWSPSYMLPEHVEDLKTIREFQNVFDAEVQKLEADRHQLGTEITTTGDNS 975
Query: 2616 WPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQKN 2437
WP+PVN+KRL+ NAQK FKVD RRPSDMHPMEIVEAVDKLQERLKVV GDD +S+EAQKN
Sbjct: 976 WPMPVNLKRLIWNAQKMFKVDLRRPSDMHPMEIVEAVDKLQERLKVVPGDDLMSIEAQKN 1035
Query: 2436 ATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSIG 2257
ATLFFNILLRS ASKRVLKEYRLTREAF+WVIGEIESRFLQSLVA GEMIGCVAAQSIG
Sbjct: 1036 ATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 1095
Query: 2256 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKN 2077
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK +V+KTKE+AKN
Sbjct: 1096 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKHEVNKTKEKAKN 1155
Query: 2076 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 1897
VQCALEYTTLRSVT+ATEVWYDPDPMST+IEEDV+FV+SYYEMPDEE+ P+KISPWLLRI
Sbjct: 1156 VQCALEYTTLRSVTEATEVWYDPDPMSTIIEEDVDFVRSYYEMPDEEVAPEKISPWLLRI 1215
Query: 1896 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDE 1717
ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL DE
Sbjct: 1216 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELQDE 1275
Query: 1716 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGVN 1537
S+EDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K+NKFDEN+GFK E EWMLDTEGVN
Sbjct: 1276 SSEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINKFDENEGFKPEIEWMLDTEGVN 1335
Query: 1536 LLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILC 1357
LLAVMC+E+VDA RTTSNHLIEVI+VLGIEAVR+ALLDELRVVISFDGSYVNYRHLAILC
Sbjct: 1336 LLAVMCNEEVDATRTTSNHLIEVIQVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILC 1395
Query: 1356 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLGQ 1177
DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE D LRGVTENIMLGQ
Sbjct: 1396 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEADHLRGVTENIMLGQ 1455
Query: 1176 LAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGTPYHDGMMSPNYL 997
LAPIGTGDCAL LN++ML+QAIE+ LPSYME G+DFGMTP+RSP+TGTPYH+GMMSP YL
Sbjct: 1456 LAPIGTGDCALYLNDQMLQQAIELQLPSYME-GMDFGMTPSRSPMTGTPYHEGMMSP-YL 1513
Query: 996 LSPNLRLSPVTDAQFSPYVGGMAF 925
LSPN+R SP+TDAQFSPYVGGMAF
Sbjct: 1514 LSPNMRSSPITDAQFSPYVGGMAF 1537
>ref|XP_006659128.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Oryza
brachyantha]
Length = 1855
Score = 2040 bits (5284), Expect = 0.0
Identities = 1002/1104 (90%), Positives = 1062/1104 (96%)
Frame = -2
Query: 4236 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 4057
KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN
Sbjct: 433 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 492
Query: 4056 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 3877
ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDT
Sbjct: 493 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDT 552
Query: 3876 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQENE 3697
IEKDVFMNILMWWEDFDGKVPAPAILKPRP+WTGKQVFNLIIPK INL+R+SAWH E E
Sbjct: 553 LIEKDVFMNILMWWEDFDGKVPAPAILKPRPIWTGKQVFNLIIPKPINLIRFSAWHSEAE 612
Query: 3696 KGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 3517
GFITPGDT VRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 613 TGFITPGDTMVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 672
Query: 3516 YWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTMMESF 3337
YWLLQN FSIGIGDTIADAATMEKINETIS AKNEVKELI+ A +K LEAEPGRTMMESF
Sbjct: 673 YWLLQNGFSIGIGDTIADAATMEKINETISTAKNEVKELIKQAHDKHLEAEPGRTMMESF 732
Query: 3336 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 3157
ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 733 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 792
Query: 3156 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 2977
IPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 793 IPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 852
Query: 2976 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLKRTDFN 2797
GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ L+SLK+K+ +F+
Sbjct: 853 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKGEFD 912
Query: 2796 DMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNS 2617
+++YE+D+ NW PNYMLPE VEDLKTIRE R+VF+AEVQKLEADRFQLGTEIATTGDN+
Sbjct: 913 TVFRYELDDENWRPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRFQLGTEIATTGDNT 972
Query: 2616 WPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQKN 2437
WP+PVN+KRL+ NAQKTFK+D RRPSDMHPMEIVEA+DKLQERLKVV GDD +S+EAQKN
Sbjct: 973 WPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVVPGDDAMSIEAQKN 1032
Query: 2436 ATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSIG 2257
ATLFFNILLRS ASKRVLKEYRLT+EAFEWVIGEIESRFLQSLVA GEMIGCVAAQSIG
Sbjct: 1033 ATLFFNILLRSTFASKRVLKEYRLTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 1092
Query: 2256 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKN 2077
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKP+V+K KE AKN
Sbjct: 1093 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVNKKKELAKN 1152
Query: 2076 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 1897
VQCALEYTTLRSVT ATE+WYDPDP+ T+IEEDVEFV+SYYEMPDE++DPDKISPWLLRI
Sbjct: 1153 VQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDVEFVRSYYEMPDEDVDPDKISPWLLRI 1212
Query: 1896 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDE 1717
ELNREMMVDKKLSMADIAEKIN EFDDDL+CIFNDDNA+KLILR+RI NDEAPKGE+ DE
Sbjct: 1213 ELNREMMVDKKLSMADIAEKINHEFDDDLSCIFNDDNADKLILRVRITNDEAPKGEIQDE 1272
Query: 1716 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGVN 1537
SAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K+NKF++NDGFK +NEWMLDTEGVN
Sbjct: 1273 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKYGKVNKFEDNDGFKPDNEWMLDTEGVN 1332
Query: 1536 LLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILC 1357
LLAVMCHEDVDA RTTSNHLIEVIEVLGIEAVR+ALLDELRVVISFDGSYVNYRHLAILC
Sbjct: 1333 LLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILC 1392
Query: 1356 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLGQ 1177
DTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAV+AE+D LRGVTENIMLGQ
Sbjct: 1393 DTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAESDYLRGVTENIMLGQ 1452
Query: 1176 LAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGTPYHDGMMSPNYL 997
LAPIGTG CAL LN++ML+QAIE+ LPSY+E GLDFGMTPARSP++GTPYH+GMMSP+YL
Sbjct: 1453 LAPIGTGGCALYLNDQMLQQAIELQLPSYVE-GLDFGMTPARSPISGTPYHEGMMSPSYL 1511
Query: 996 LSPNLRLSPVTDAQFSPYVGGMAF 925
LSPN+R SP+TDAQFSPYVGGMAF
Sbjct: 1512 LSPNIRASPITDAQFSPYVGGMAF 1535
>gb|EMJ04257.1| hypothetical protein PRUPE_ppa000093mg [Prunus persica]
Length = 1844
Score = 2038 bits (5280), Expect = 0.0
Identities = 1008/1104 (91%), Positives = 1060/1104 (96%)
Frame = -2
Query: 4236 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 4057
KSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN
Sbjct: 433 KSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 492
Query: 4056 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 3877
ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDT
Sbjct: 493 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDT 552
Query: 3876 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQENE 3697
FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINL R SAWH E E
Sbjct: 553 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLQRTSAWHSEAE 612
Query: 3696 KGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 3517
G ITPGDT VRIEKGELL+GTLCKK LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 613 SGNITPGDTFVRIEKGELLAGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 672
Query: 3516 YWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTMMESF 3337
YWLLQNAFSIGIGDTIADAATMEKINETIS AKNEVK+LI AQ KQLEAEPGRTMM+SF
Sbjct: 673 YWLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKDLISKAQSKQLEAEPGRTMMDSF 732
Query: 3336 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 3157
EN+VNQVLN+ARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 733 ENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 792
Query: 3156 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 2977
IP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 793 IPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 852
Query: 2976 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLKRTDFN 2797
GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ L+SLK+K+++F+
Sbjct: 853 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFD 912
Query: 2796 DMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNS 2617
+ YE+D+ NWNP+YML E VEDLKTIRE R+VFDAEVQKLE DR QLGTEIA TGDNS
Sbjct: 913 KTFSYELDDENWNPDYMLHEHVEDLKTIREFRNVFDAEVQKLETDRLQLGTEIAVTGDNS 972
Query: 2616 WPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQKN 2437
WPLPVN+KRL+ NAQKTFK+DFRR SDMHPMEIVEA+DKLQERLKVV GDD LS+EAQKN
Sbjct: 973 WPLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLKVVPGDDLLSVEAQKN 1032
Query: 2436 ATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSIG 2257
ATLFF+ILLRS ASKRVL EYRLTREAFEWVIGEIESRFLQSLVA GEMIGCVAAQSIG
Sbjct: 1033 ATLFFSILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 1092
Query: 2256 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKN 2077
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLKP+ +KTKERAKN
Sbjct: 1093 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKN 1152
Query: 2076 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 1897
VQCALEYTTLRSVTQATEVWYDPDPMST+IEEDV+FV SYYEMPDEE++PDKISPWLLRI
Sbjct: 1153 VQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVNSYYEMPDEEVNPDKISPWLLRI 1212
Query: 1896 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDE 1717
ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMN EAPKGEL DE
Sbjct: 1213 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNAEAPKGELVDE 1272
Query: 1716 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGVN 1537
SAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K+NKFD N+GFKAE EWMLDTEGVN
Sbjct: 1273 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHGKVNKFDPNEGFKAEQEWMLDTEGVN 1332
Query: 1536 LLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILC 1357
LLAV+CH+DVDARRTTSNHLIE++E+LGIEAVR++LLDELRVVISFDGSYVNYRHLAILC
Sbjct: 1333 LLAVLCHDDVDARRTTSNHLIEILEILGIEAVRRSLLDELRVVISFDGSYVNYRHLAILC 1392
Query: 1356 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLGQ 1177
DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETD LRGVTENIMLGQ
Sbjct: 1393 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDYLRGVTENIMLGQ 1452
Query: 1176 LAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGTPYHDGMMSPNYL 997
LAPIGTGDCAL LN+EMLK AIE+ LPSYM+ GLDFGMTP+RSP++GTPYH+GMMSPNYL
Sbjct: 1453 LAPIGTGDCALYLNDEMLKNAIELQLPSYMD-GLDFGMTPSRSPVSGTPYHEGMMSPNYL 1511
Query: 996 LSPNLRLSPVTDAQFSPYVGGMAF 925
LSPNLRLSP++DAQFSPYVGGMAF
Sbjct: 1512 LSPNLRLSPISDAQFSPYVGGMAF 1535
>gb|EXC35292.1| DNA-directed RNA polymerase II subunit rpb1 [Morus notabilis]
Length = 1866
Score = 2034 bits (5269), Expect = 0.0
Identities = 1010/1124 (89%), Positives = 1064/1124 (94%), Gaps = 20/1124 (1%)
Frame = -2
Query: 4236 KSSDQHLELGYK--------------------VERHLNDGDFVLFNRQPSLHKMSIMGHR 4117
KSSD HLELGYK VERHLNDGDFVLFNRQPSLHKMSIMGHR
Sbjct: 428 KSSDHHLELGYKARLPILLLLLLFLGPWSGSVVERHLNDGDFVLFNRQPSLHKMSIMGHR 487
Query: 4116 IKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRP 3937
IKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRP
Sbjct: 488 IKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRP 547
Query: 3936 VMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFN 3757
VMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFN
Sbjct: 548 VMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFN 607
Query: 3756 LIIPKQINLLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIW 3577
LIIPKQINL R SAWH E+E G+ITPGDT VRIEKGELLSGTLCKKTLGTS+GSLIHVIW
Sbjct: 608 LIIPKQINLNRTSAWHAESESGYITPGDTLVRIEKGELLSGTLCKKTLGTSSGSLIHVIW 667
Query: 3576 EEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELI 3397
EEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADA+TMEKINETIS AKN+VKELI
Sbjct: 668 EEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINETISRAKNDVKELI 727
Query: 3396 RAAQEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGS 3217
R AQ K+LEAEPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGS
Sbjct: 728 RKAQAKELEAEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGS 787
Query: 3216 FINISQMTACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFF 3037
FINISQMTACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFF
Sbjct: 788 FINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFF 847
Query: 3036 FHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD 2857
FHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD
Sbjct: 848 FHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD 907
Query: 2856 SVWIESQPLESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQ 2677
SVWIESQ L+SLK+K+T+F +++YE DN WNP YMLPE VEDLKTIRE R+VFDAEVQ
Sbjct: 908 SVWIESQKLDSLKMKKTEFERVFRYEFDNETWNPTYMLPEHVEDLKTIREFRNVFDAEVQ 967
Query: 2676 KLEADRFQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKL 2497
KLE+DR QLGTEIATTGDNSWPLPVN+KRL+ NAQKTFK+DFRR SDMHPMEIVEA+DKL
Sbjct: 968 KLESDRLQLGTEIATTGDNSWPLPVNLKRLIQNAQKTFKIDFRRTSDMHPMEIVEAIDKL 1027
Query: 2496 QERLKVVVGDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRF 2317
QERLKVV G+D LS+EAQKNATLFFNILLRS ASKRVL+EYRLTRE FEWVIGEIESRF
Sbjct: 1028 QERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLEEYRLTREGFEWVIGEIESRF 1087
Query: 2316 LQSLVAAGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKT 2137
LQSLVA GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKT
Sbjct: 1088 LQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKT 1147
Query: 2136 PSLSVYLKPDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSY 1957
PSLSV+LKP+ SKTKERAK VQCALEYTTLRSVTQATEVWYDPDPMST+I+EDV+FV+SY
Sbjct: 1148 PSLSVFLKPEASKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIDEDVDFVRSY 1207
Query: 1956 YEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEK 1777
YEMPDEEI+PDKISPWLLRIELNREMMVDKKLSMADIAEKIN+EFDDDLTCIFNDDNAEK
Sbjct: 1208 YEMPDEEINPDKISPWLLRIELNREMMVDKKLSMADIAEKINVEFDDDLTCIFNDDNAEK 1267
Query: 1776 LILRIRIMNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKF 1597
LILRIRIMNDEAPKG+L DE+AEDDVFLKKIESNMLTEM+LRGIPDINKVFIK+ K+NKF
Sbjct: 1268 LILRIRIMNDEAPKGDLTDEAAEDDVFLKKIESNMLTEMSLRGIPDINKVFIKHGKVNKF 1327
Query: 1596 DENDGFKAENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDEL 1417
DENDGFK ENEWMLDTEGVNLLAV+CHEDVDA+RTTSNHLIEVIEVLGIEAVR++LLDEL
Sbjct: 1328 DENDGFKPENEWMLDTEGVNLLAVICHEDVDAKRTTSNHLIEVIEVLGIEAVRRSLLDEL 1387
Query: 1416 RVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDA 1237
RVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDA
Sbjct: 1388 RVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDA 1447
Query: 1236 AVFAETDCLRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTP 1057
AV+AETD LRGVTENIMLGQLAPIGTG CAL LN+EMLK AIE+ LPSYM+ GLDFGMTP
Sbjct: 1448 AVYAETDYLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYMD-GLDFGMTP 1506
Query: 1056 ARSPLTGTPYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 925
+RSP++GTPYH+GMMSP YLLSPNLRLSP++DAQFSPYVGGMAF
Sbjct: 1507 SRSPVSGTPYHEGMMSPGYLLSPNLRLSPISDAQFSPYVGGMAF 1550
>ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cucumis
sativus]
Length = 1853
Score = 2027 bits (5251), Expect = 0.0
Identities = 1004/1104 (90%), Positives = 1057/1104 (95%)
Frame = -2
Query: 4236 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 4057
KSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN
Sbjct: 433 KSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 492
Query: 4056 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 3877
ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDT
Sbjct: 493 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDT 552
Query: 3876 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQENE 3697
FI KDVFMN LMWWEDFDGK+PAPAILKP+PLWTGKQVFNLIIPKQINL R SAWH E+E
Sbjct: 553 FITKDVFMNTLMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQINLTRTSAWHSESE 612
Query: 3696 KGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 3517
G ITPGDT VRIEKGELLSGTLCKK LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 613 TGHITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 672
Query: 3516 YWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTMMESF 3337
YWLLQNAFSIGIGDTIADAATMEKINETIS AKNEVK LI+ AQE+ LE EPGRTMM+SF
Sbjct: 673 YWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSLEPEPGRTMMDSF 732
Query: 3336 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 3157
EN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 733 ENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 792
Query: 3156 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 2977
IPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 793 IPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 852
Query: 2976 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLKRTDFN 2797
GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ L+SLK+K+ +F
Sbjct: 853 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFE 912
Query: 2796 DMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNS 2617
+++YE ++ NW PNYMLPE VEDLKTIRE R+VF+AEVQKLEADR+QLGTEIATTG+NS
Sbjct: 913 RIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENS 972
Query: 2616 WPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQKN 2437
WP+PVN+KRL+ NAQKTFK+DFRR SDMHPMEIVEA+DKLQERLKVV G+D LS+EAQKN
Sbjct: 973 WPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKN 1032
Query: 2436 ATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSIG 2257
ATLFFNILLRS ASKRVL EYRLTREAFEWVIGEIESRFLQSLVA GEMIGCVAAQSIG
Sbjct: 1033 ATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 1092
Query: 2256 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKN 2077
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLKP+ +KTKERAK
Sbjct: 1093 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKT 1152
Query: 2076 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 1897
VQCALEYTTLRSVTQATEVWYDPDPMST+IEED++FVKSYYEMPDEEI P+KISPWLLRI
Sbjct: 1153 VQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRI 1212
Query: 1896 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDE 1717
ELNREMMVDKKLSMA+IAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL DE
Sbjct: 1213 ELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDE 1272
Query: 1716 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGVN 1537
SAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K+NKFDEN+GFK E EWMLDTEGVN
Sbjct: 1273 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVN 1332
Query: 1536 LLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILC 1357
LLAVM HEDVDARRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILC
Sbjct: 1333 LLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILC 1392
Query: 1356 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLGQ 1177
DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETD LRGVTENIMLGQ
Sbjct: 1393 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQ 1452
Query: 1176 LAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGTPYHDGMMSPNYL 997
LAPIGTG CAL LN+EMLK AIE+ LPSY++ GLDFGMTP+RSP++GTPYH+GMMSPNYL
Sbjct: 1453 LAPIGTGGCALYLNDEMLKNAIELQLPSYID-GLDFGMTPSRSPISGTPYHEGMMSPNYL 1511
Query: 996 LSPNLRLSPVTDAQFSPYVGGMAF 925
LSPNLRLSP++DAQFSPYVGGMAF
Sbjct: 1512 LSPNLRLSPISDAQFSPYVGGMAF 1535
>ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
subunit RPB1-like [Cucumis sativus]
Length = 1832
Score = 2027 bits (5251), Expect = 0.0
Identities = 1004/1104 (90%), Positives = 1057/1104 (95%)
Frame = -2
Query: 4236 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 4057
KSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN
Sbjct: 433 KSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 492
Query: 4056 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 3877
ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDT
Sbjct: 493 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDT 552
Query: 3876 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQENE 3697
FI KDVFMN LMWWEDFDGK+PAPAILKP+PLWTGKQVFNLIIPKQINL R SAWH E+E
Sbjct: 553 FITKDVFMNTLMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQINLTRTSAWHSESE 612
Query: 3696 KGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 3517
G ITPGDT VRIEKGELLSGTLCKK LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 613 TGHITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 672
Query: 3516 YWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTMMESF 3337
YWLLQNAFSIGIGDTIADAATMEKINETIS AKNEVK LI+ AQE+ LE EPGRTMM+SF
Sbjct: 673 YWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSLEPEPGRTMMDSF 732
Query: 3336 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 3157
EN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 733 ENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 792
Query: 3156 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 2977
IPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 793 IPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 852
Query: 2976 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLKRTDFN 2797
GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ L+SLK+K+ +F
Sbjct: 853 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFE 912
Query: 2796 DMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNS 2617
+++YE ++ NW PNYMLPE VEDLKTIRE R+VF+AEVQKLEADR+QLGTEIATTG+NS
Sbjct: 913 RIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENS 972
Query: 2616 WPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQKN 2437
WP+PVN+KRL+ NAQKTFK+DFRR SDMHPMEIVEA+DKLQERLKVV G+D LS+EAQKN
Sbjct: 973 WPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKN 1032
Query: 2436 ATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSIG 2257
ATLFFNILLRS ASKRVL EYRLTREAFEWVIGEIESRFLQSLVA GEMIGCVAAQSIG
Sbjct: 1033 ATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 1092
Query: 2256 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKN 2077
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLKP+ +KTKERAK
Sbjct: 1093 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKT 1152
Query: 2076 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 1897
VQCALEYTTLRSVTQATEVWYDPDPMST+IEED++FVKSYYEMPDEEI P+KISPWLLRI
Sbjct: 1153 VQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRI 1212
Query: 1896 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDE 1717
ELNREMMVDKKLSMA+IAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL DE
Sbjct: 1213 ELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDE 1272
Query: 1716 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGVN 1537
SAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K+NKFDEN+GFK E EWMLDTEGVN
Sbjct: 1273 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVN 1332
Query: 1536 LLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILC 1357
LLAVM HEDVDARRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILC
Sbjct: 1333 LLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILC 1392
Query: 1356 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLGQ 1177
DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETD LRGVTENIMLGQ
Sbjct: 1393 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQ 1452
Query: 1176 LAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGTPYHDGMMSPNYL 997
LAPIGTG CAL LN+EMLK AIE+ LPSY++ GLDFGMTP+RSP++GTPYH+GMMSPNYL
Sbjct: 1453 LAPIGTGGCALYLNDEMLKNAIELQLPSYID-GLDFGMTPSRSPISGTPYHEGMMSPNYL 1511
Query: 996 LSPNLRLSPVTDAQFSPYVGGMAF 925
LSPNLRLSP++DAQFSPYVGGMAF
Sbjct: 1512 LSPNLRLSPISDAQFSPYVGGMAF 1535
>ref|XP_004287766.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Fragaria
vesca subsp. vesca]
Length = 1842
Score = 2026 bits (5248), Expect = 0.0
Identities = 999/1104 (90%), Positives = 1056/1104 (95%)
Frame = -2
Query: 4236 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 4057
KSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN
Sbjct: 431 KSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 490
Query: 4056 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 3877
ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDT
Sbjct: 491 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDT 550
Query: 3876 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQENE 3697
FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINL R SAWH E+E
Sbjct: 551 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLQRTSAWHSESE 610
Query: 3696 KGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 3517
G ITPGDT VRIEKGELLSGTLCKK LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 611 TGNITPGDTHVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 670
Query: 3516 YWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTMMESF 3337
YWLLQNAFSIGIGDTIADAATMEKINETIS AKNEVKELI AQ K LE EPGRTMM+SF
Sbjct: 671 YWLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKELISKAQSKSLEPEPGRTMMDSF 730
Query: 3336 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 3157
EN+VNQVLN+ARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 731 ENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 790
Query: 3156 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 2977
IP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 791 IPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 850
Query: 2976 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLKRTDFN 2797
GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ L+SLK+K+ +F+
Sbjct: 851 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFD 910
Query: 2796 DMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNS 2617
+ Y D+ NWNP+YMLPE VEDLKTIRE R+VFDAEV KLE DR QLGTEIA TGDNS
Sbjct: 911 KTFAYVFDDENWNPDYMLPEHVEDLKTIREFRNVFDAEVSKLETDRLQLGTEIAVTGDNS 970
Query: 2616 WPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQKN 2437
WPLPVN+KRL+ NAQKTFK+DFRR SDMHPMEIVEA+DKLQERL+VV GDD LS+EAQKN
Sbjct: 971 WPLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLRVVPGDDLLSVEAQKN 1030
Query: 2436 ATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSIG 2257
ATLFFNILLRS ASKRVL+EYRLTREAFEWVIGEIESRFLQSLVA GEMIGCVAAQSIG
Sbjct: 1031 ATLFFNILLRSTFASKRVLEEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 1090
Query: 2256 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKN 2077
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLKP+ +KTKERAKN
Sbjct: 1091 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKN 1150
Query: 2076 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 1897
VQCALEYTTLRSVTQATEVWYDPDPMSTLIEED++FV+SYYEMPDEE++PDKISPWLLRI
Sbjct: 1151 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDLDFVRSYYEMPDEEVNPDKISPWLLRI 1210
Query: 1896 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDE 1717
ELNREMMVDKKLSMADIAEKINLEFD DLTCIFNDDNAEKLILRIRIMN+E PKG+ DE
Sbjct: 1211 ELNREMMVDKKLSMADIAEKINLEFDGDLTCIFNDDNAEKLILRIRIMNEETPKGDSQDE 1270
Query: 1716 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGVN 1537
SAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K+NKFD+N+GFKAE EWMLDTEGVN
Sbjct: 1271 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHGKVNKFDQNEGFKAEQEWMLDTEGVN 1330
Query: 1536 LLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILC 1357
LLAV+CH+DVDA+RTTSNHLIE+IEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILC
Sbjct: 1331 LLAVLCHDDVDAKRTTSNHLIEIIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILC 1390
Query: 1356 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLGQ 1177
DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDA+VFAETD LRGVTENIMLGQ
Sbjct: 1391 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDASVFAETDHLRGVTENIMLGQ 1450
Query: 1176 LAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGTPYHDGMMSPNYL 997
LAPIGTGDCAL LN+EMLK AIE+ LPSY++ GLDFGMTP+RSP++GTP+ DGMMSPNYL
Sbjct: 1451 LAPIGTGDCALYLNDEMLKNAIELQLPSYVD-GLDFGMTPSRSPVSGTPFRDGMMSPNYL 1509
Query: 996 LSPNLRLSPVTDAQFSPYVGGMAF 925
LSPN+R+SP++DAQFSPYVGGMAF
Sbjct: 1510 LSPNMRMSPISDAQFSPYVGGMAF 1533
>ref|XP_004972809.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like isoform
X1 [Setaria italica]
Length = 1852
Score = 2024 bits (5244), Expect = 0.0
Identities = 993/1105 (89%), Positives = 1060/1105 (95%), Gaps = 1/1105 (0%)
Frame = -2
Query: 4236 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 4057
KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN
Sbjct: 433 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 492
Query: 4056 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 3877
ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDT
Sbjct: 493 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDT 552
Query: 3876 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQENE 3697
IEKDVFMN LMWW+DFDGK+PAPAILKPRP+WTGKQVFNLIIPKQINL+R+SAWH E E
Sbjct: 553 LIEKDVFMNTLMWWQDFDGKIPAPAILKPRPIWTGKQVFNLIIPKQINLIRFSAWHSETE 612
Query: 3696 KGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 3517
GFITPGDT VRIEKGELLSGTLCKK+LGT +GSLIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 613 TGFITPGDTMVRIEKGELLSGTLCKKSLGTGSGSLIHVIWEEVGPDAARKFLGHTQWLVN 672
Query: 3516 YWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTMMESF 3337
YWLLQ FSIGIGDTIADAATMEKINETIS AKNEVKELI+ AQ+K LEAEPGRTMMESF
Sbjct: 673 YWLLQQGFSIGIGDTIADAATMEKINETISKAKNEVKELIKQAQDKHLEAEPGRTMMESF 732
Query: 3336 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 3157
ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 733 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 792
Query: 3156 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 2977
IPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 793 IPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 852
Query: 2976 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLKRTDFN 2797
GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ L+SLK+K+ +F+
Sbjct: 853 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKGEFD 912
Query: 2796 DMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNS 2617
++++YE+D+ NW PNYMLPE V+DLKTIRE R+VF+AEVQKLEADRFQLGTEI TTGDNS
Sbjct: 913 NVFRYELDDENWRPNYMLPEHVDDLKTIREFRNVFEAEVQKLEADRFQLGTEITTTGDNS 972
Query: 2616 WPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQKN 2437
WP+PVN+KRL+ NAQKTFK+DFRRPSDMHPMEIVEA+DKLQERLKVV GDD +S+EAQKN
Sbjct: 973 WPMPVNLKRLIWNAQKTFKIDFRRPSDMHPMEIVEAIDKLQERLKVVPGDDAMSIEAQKN 1032
Query: 2436 ATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSIG 2257
ATLFFNILLRS ASKRVLKEYRLT+EAFEWVIGEIESRFLQSLVA GEMIGCVAAQSIG
Sbjct: 1033 ATLFFNILLRSTFASKRVLKEYRLTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 1092
Query: 2256 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKN 2077
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKP+V+K KE AKN
Sbjct: 1093 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVNKKKELAKN 1152
Query: 2076 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 1897
VQCALEYTTLRSVT ATE+WYDPDP+ T+IEEDVEFV+SYYEMPDE+IDPDKISPWLLRI
Sbjct: 1153 VQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDVEFVRSYYEMPDEDIDPDKISPWLLRI 1212
Query: 1896 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDE 1717
ELNREMM+DKKLSMADIAEKIN EFDDDL+CIFNDDNA+KLILRIRI ND+APKGE+ DE
Sbjct: 1213 ELNREMMIDKKLSMADIAEKINREFDDDLSCIFNDDNADKLILRIRITNDDAPKGEIQDE 1272
Query: 1716 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGVN 1537
SAEDDVFLKKIE NMLTEMALRGIPDINKVFIK+ K+NKFD+++GFKA+NEWMLDTEGVN
Sbjct: 1273 SAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKHGKVNKFDQSEGFKADNEWMLDTEGVN 1332
Query: 1536 LLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILC 1357
LLAVMCHEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILC
Sbjct: 1333 LLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILC 1392
Query: 1356 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLGQ 1177
DTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAV+AE D LRGVTENIMLGQ
Sbjct: 1393 DTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAEADLLRGVTENIMLGQ 1452
Query: 1176 LAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGTPYHDGMMSPNYL 997
LAPIGTG CAL LN++ML+QAIE+ LPSY+E GLDFGMTPARSP++GTPYH+GMMSP+YL
Sbjct: 1453 LAPIGTGGCALYLNDQMLQQAIELQLPSYVE-GLDFGMTPARSPISGTPYHEGMMSPSYL 1511
Query: 996 LSPNLRLSPV-TDAQFSPYVGGMAF 925
LSPN+R SP+ TDA FSPYVG MAF
Sbjct: 1512 LSPNIRASPINTDASFSPYVGHMAF 1536
>ref|XP_004972810.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like isoform
X2 [Setaria italica]
Length = 1852
Score = 2022 bits (5239), Expect = 0.0
Identities = 992/1105 (89%), Positives = 1059/1105 (95%), Gaps = 1/1105 (0%)
Frame = -2
Query: 4236 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 4057
KSSDQHL+LGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN
Sbjct: 433 KSSDQHLDLGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 492
Query: 4056 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 3877
ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDT
Sbjct: 493 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDT 552
Query: 3876 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQENE 3697
IEKDVFMNILMWW+DFDGK+PAPAILKPRP+WTGKQVFNLIIPKQINL+R+SAWH E E
Sbjct: 553 LIEKDVFMNILMWWQDFDGKIPAPAILKPRPIWTGKQVFNLIIPKQINLIRFSAWHSETE 612
Query: 3696 KGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 3517
GFITPGDT VRIEKGELLSGTLCKK+LGT +GSLIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 613 TGFITPGDTMVRIEKGELLSGTLCKKSLGTGSGSLIHVIWEEVGPDAARKFLGHTQWLVN 672
Query: 3516 YWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTMMESF 3337
YWLLQ FSIGIGDTIADAATMEKINETIS AKNEVKELI+ A E LEAEPGRTMMESF
Sbjct: 673 YWLLQQGFSIGIGDTIADAATMEKINETISKAKNEVKELIKQAHENHLEAEPGRTMMESF 732
Query: 3336 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 3157
ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 733 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 792
Query: 3156 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 2977
IPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 793 IPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 852
Query: 2976 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLKRTDFN 2797
GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ L+SLK+K+ +F+
Sbjct: 853 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKGEFD 912
Query: 2796 DMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNS 2617
++++YE+D+ NW PNYMLPE V+DLKTIRE R+VF+AEVQKLEADRFQLGTEI TTGDNS
Sbjct: 913 NVFRYELDDENWRPNYMLPEHVDDLKTIREFRNVFEAEVQKLEADRFQLGTEITTTGDNS 972
Query: 2616 WPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQKN 2437
WP+PVN+KRL+ NAQKTFK+DFRRPSDMHPMEIVEA+DKLQERLKVV GDD +S+EAQKN
Sbjct: 973 WPMPVNLKRLIWNAQKTFKIDFRRPSDMHPMEIVEAIDKLQERLKVVPGDDAMSIEAQKN 1032
Query: 2436 ATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSIG 2257
ATLFFNILLRS ASKRVLKEYRLT+EAFEWVIGEIESRFLQSLVA GEMIGCVAAQSIG
Sbjct: 1033 ATLFFNILLRSTFASKRVLKEYRLTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 1092
Query: 2256 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKN 2077
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKP+V+K KE AKN
Sbjct: 1093 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVNKKKELAKN 1152
Query: 2076 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 1897
VQCALEYTTLRSVT ATE+WYDPDP+ T+IEEDVEFV+SYYEMPDE+IDPDKISPWLLRI
Sbjct: 1153 VQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDVEFVRSYYEMPDEDIDPDKISPWLLRI 1212
Query: 1896 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDE 1717
ELNREMM+DKKLSMADIAEKIN EFDDDL+CIFNDDNA+KLILRIRI ND+APKGE+ DE
Sbjct: 1213 ELNREMMIDKKLSMADIAEKINREFDDDLSCIFNDDNADKLILRIRITNDDAPKGEIQDE 1272
Query: 1716 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGVN 1537
SAEDDVFLKKIE NMLTEMALRGIPDINKVFIK+ K+NKFD+++GFKA+NEWMLDTEGVN
Sbjct: 1273 SAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKHGKVNKFDQSEGFKADNEWMLDTEGVN 1332
Query: 1536 LLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILC 1357
LLAVMCHEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILC
Sbjct: 1333 LLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILC 1392
Query: 1356 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLGQ 1177
DTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAV+AE D LRGVTENIMLGQ
Sbjct: 1393 DTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAEADLLRGVTENIMLGQ 1452
Query: 1176 LAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGTPYHDGMMSPNYL 997
LAPIGTG CAL LN++ML+QAIE+ LPSY+E GLDFGMTPARSP++GTPYH+GMMSP+YL
Sbjct: 1453 LAPIGTGGCALYLNDQMLQQAIELQLPSYVE-GLDFGMTPARSPISGTPYHEGMMSPSYL 1511
Query: 996 LSPNLRLSPV-TDAQFSPYVGGMAF 925
LSPN+R SP+ TDA FSPYVG MAF
Sbjct: 1512 LSPNIRASPINTDASFSPYVGHMAF 1536
>gb|EOX90745.1| DNA-directed RNA polymerase II subunit RPB1 isoform 5 [Theobroma
cacao]
Length = 1512
Score = 2019 bits (5230), Expect = 0.0
Identities = 1000/1105 (90%), Positives = 1060/1105 (95%), Gaps = 1/1105 (0%)
Frame = -2
Query: 4236 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 4057
KSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYSTFRLNLSVTSPYN
Sbjct: 83 KSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYSTFRLNLSVTSPYN 142
Query: 4056 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 3877
ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDT
Sbjct: 143 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDT 202
Query: 3876 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQENE 3697
FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLR SAWH E E
Sbjct: 203 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRNSAWHSETE 262
Query: 3696 KGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 3517
GFITPGDTQVRIEKGELLSGTLCKK LGTS+GSLIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 263 TGFITPGDTQVRIEKGELLSGTLCKKALGTSSGSLIHVIWEEVGPDAARKFLGHTQWLVN 322
Query: 3516 YWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTMMESF 3337
YWLLQNAFSIGIGDTIADAATMEKINETIS AK EVK LI AQ K LE EPGRTMMESF
Sbjct: 323 YWLLQNAFSIGIGDTIADAATMEKINETISKAKEEVKNLIVKAQNKDLEPEPGRTMMESF 382
Query: 3336 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 3157
EN+VNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 383 ENKVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 442
Query: 3156 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 2977
IPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 443 IPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 502
Query: 2976 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLKRTDFN 2797
GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQ L+SLK+K+++F+
Sbjct: 503 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQKLDSLKMKKSEFD 562
Query: 2796 DMYKYEIDNPNWNP-NYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDN 2620
+++Y ID+ +WNP +YMLPE +EDL+TI+E+R VF+AEVQKL+ADR+QLGTEIA TGD+
Sbjct: 563 RVFRYNIDDESWNPTSYMLPEHIEDLRTIQELRDVFEAEVQKLDADRYQLGTEIAVTGDS 622
Query: 2619 SWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQK 2440
+WPLPVN+KRL+ NAQKTFKVDFRR SD+HP+EIV++VDKLQERLKVV G D LS+EAQK
Sbjct: 623 NWPLPVNLKRLIWNAQKTFKVDFRRVSDLHPVEIVDSVDKLQERLKVVPGTDPLSVEAQK 682
Query: 2439 NATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSI 2260
NATLFF+ILLRS LASKRVL+EYRLT+EAFEWVIGEIESRFLQSLVA GEMIGCVAAQSI
Sbjct: 683 NATLFFSILLRSTLASKRVLQEYRLTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSI 742
Query: 2259 GEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAK 2080
GEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL P+ SKTKE+AK
Sbjct: 743 GEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLSPEASKTKEKAK 802
Query: 2079 NVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLR 1900
NVQCALEYTTLRSVT ATEVWYDPDP ST+IEED++FVKSYYEMPDEE+ P+KISPWLLR
Sbjct: 803 NVQCALEYTTLRSVTHATEVWYDPDPTSTIIEEDIDFVKSYYEMPDEEVAPEKISPWLLR 862
Query: 1899 IELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELND 1720
IELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDE PKGELND
Sbjct: 863 IELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEGPKGELND 922
Query: 1719 ESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGV 1540
ESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+SK +KFDE DG+K EW+LDTEGV
Sbjct: 923 ESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHSKASKFDEADGYKTGEEWVLDTEGV 982
Query: 1539 NLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAIL 1360
NLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAIL
Sbjct: 983 NLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAIL 1042
Query: 1359 CDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLG 1180
CDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE+D LRGVTENIMLG
Sbjct: 1043 CDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESDYLRGVTENIMLG 1102
Query: 1179 QLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGTPYHDGMMSPNY 1000
QLAPIGTGDCAL LN+EMLK AIE+ LPSYME GL+FGMTPARSP++GTPYH+GMMSP+Y
Sbjct: 1103 QLAPIGTGDCALYLNDEMLKNAIELQLPSYME-GLEFGMTPARSPVSGTPYHEGMMSPSY 1161
Query: 999 LLSPNLRLSPVTDAQFSPYVGGMAF 925
LLSPNLRLSP+TDAQFSPYVGGMAF
Sbjct: 1162 LLSPNLRLSPITDAQFSPYVGGMAF 1186
>gb|EOX90744.1| DNA-directed RNA polymerase II subunit RPB1 isoform 4 [Theobroma
cacao]
Length = 1511
Score = 2019 bits (5230), Expect = 0.0
Identities = 1000/1105 (90%), Positives = 1060/1105 (95%), Gaps = 1/1105 (0%)
Frame = -2
Query: 4236 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 4057
KSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYSTFRLNLSVTSPYN
Sbjct: 83 KSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYSTFRLNLSVTSPYN 142
Query: 4056 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 3877
ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDT
Sbjct: 143 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDT 202
Query: 3876 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQENE 3697
FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLR SAWH E E
Sbjct: 203 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRNSAWHSETE 262
Query: 3696 KGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 3517
GFITPGDTQVRIEKGELLSGTLCKK LGTS+GSLIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 263 TGFITPGDTQVRIEKGELLSGTLCKKALGTSSGSLIHVIWEEVGPDAARKFLGHTQWLVN 322
Query: 3516 YWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTMMESF 3337
YWLLQNAFSIGIGDTIADAATMEKINETIS AK EVK LI AQ K LE EPGRTMMESF
Sbjct: 323 YWLLQNAFSIGIGDTIADAATMEKINETISKAKEEVKNLIVKAQNKDLEPEPGRTMMESF 382
Query: 3336 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 3157
EN+VNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 383 ENKVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 442
Query: 3156 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 2977
IPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 443 IPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 502
Query: 2976 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLKRTDFN 2797
GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQ L+SLK+K+++F+
Sbjct: 503 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQKLDSLKMKKSEFD 562
Query: 2796 DMYKYEIDNPNWNP-NYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDN 2620
+++Y ID+ +WNP +YMLPE +EDL+TI+E+R VF+AEVQKL+ADR+QLGTEIA TGD+
Sbjct: 563 RVFRYNIDDESWNPTSYMLPEHIEDLRTIQELRDVFEAEVQKLDADRYQLGTEIAVTGDS 622
Query: 2619 SWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQK 2440
+WPLPVN+KRL+ NAQKTFKVDFRR SD+HP+EIV++VDKLQERLKVV G D LS+EAQK
Sbjct: 623 NWPLPVNLKRLIWNAQKTFKVDFRRVSDLHPVEIVDSVDKLQERLKVVPGTDPLSVEAQK 682
Query: 2439 NATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSI 2260
NATLFF+ILLRS LASKRVL+EYRLT+EAFEWVIGEIESRFLQSLVA GEMIGCVAAQSI
Sbjct: 683 NATLFFSILLRSTLASKRVLQEYRLTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSI 742
Query: 2259 GEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAK 2080
GEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL P+ SKTKE+AK
Sbjct: 743 GEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLSPEASKTKEKAK 802
Query: 2079 NVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLR 1900
NVQCALEYTTLRSVT ATEVWYDPDP ST+IEED++FVKSYYEMPDEE+ P+KISPWLLR
Sbjct: 803 NVQCALEYTTLRSVTHATEVWYDPDPTSTIIEEDIDFVKSYYEMPDEEVAPEKISPWLLR 862
Query: 1899 IELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELND 1720
IELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDE PKGELND
Sbjct: 863 IELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEGPKGELND 922
Query: 1719 ESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGV 1540
ESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+SK +KFDE DG+K EW+LDTEGV
Sbjct: 923 ESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHSKASKFDEADGYKTGEEWVLDTEGV 982
Query: 1539 NLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAIL 1360
NLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAIL
Sbjct: 983 NLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAIL 1042
Query: 1359 CDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLG 1180
CDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE+D LRGVTENIMLG
Sbjct: 1043 CDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESDYLRGVTENIMLG 1102
Query: 1179 QLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGTPYHDGMMSPNY 1000
QLAPIGTGDCAL LN+EMLK AIE+ LPSYME GL+FGMTPARSP++GTPYH+GMMSP+Y
Sbjct: 1103 QLAPIGTGDCALYLNDEMLKNAIELQLPSYME-GLEFGMTPARSPVSGTPYHEGMMSPSY 1161
Query: 999 LLSPNLRLSPVTDAQFSPYVGGMAF 925
LLSPNLRLSP+TDAQFSPYVGGMAF
Sbjct: 1162 LLSPNLRLSPITDAQFSPYVGGMAF 1186
>gb|EOX90741.1| DNA-directed RNA polymerase II subunit RPB1 isoform 1 [Theobroma
cacao] gi|508698846|gb|EOX90742.1| DNA-directed RNA
polymerase II subunit RPB1 isoform 1 [Theobroma cacao]
gi|508698847|gb|EOX90743.1| DNA-directed RNA polymerase
II subunit RPB1 isoform 1 [Theobroma cacao]
Length = 1861
Score = 2019 bits (5230), Expect = 0.0
Identities = 1000/1105 (90%), Positives = 1060/1105 (95%), Gaps = 1/1105 (0%)
Frame = -2
Query: 4236 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 4057
KSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYSTFRLNLSVTSPYN
Sbjct: 433 KSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYSTFRLNLSVTSPYN 492
Query: 4056 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 3877
ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDT
Sbjct: 493 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDT 552
Query: 3876 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQENE 3697
FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLR SAWH E E
Sbjct: 553 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRNSAWHSETE 612
Query: 3696 KGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 3517
GFITPGDTQVRIEKGELLSGTLCKK LGTS+GSLIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 613 TGFITPGDTQVRIEKGELLSGTLCKKALGTSSGSLIHVIWEEVGPDAARKFLGHTQWLVN 672
Query: 3516 YWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTMMESF 3337
YWLLQNAFSIGIGDTIADAATMEKINETIS AK EVK LI AQ K LE EPGRTMMESF
Sbjct: 673 YWLLQNAFSIGIGDTIADAATMEKINETISKAKEEVKNLIVKAQNKDLEPEPGRTMMESF 732
Query: 3336 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 3157
EN+VNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 733 ENKVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 792
Query: 3156 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 2977
IPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 793 IPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 852
Query: 2976 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLKRTDFN 2797
GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQ L+SLK+K+++F+
Sbjct: 853 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQKLDSLKMKKSEFD 912
Query: 2796 DMYKYEIDNPNWNP-NYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDN 2620
+++Y ID+ +WNP +YMLPE +EDL+TI+E+R VF+AEVQKL+ADR+QLGTEIA TGD+
Sbjct: 913 RVFRYNIDDESWNPTSYMLPEHIEDLRTIQELRDVFEAEVQKLDADRYQLGTEIAVTGDS 972
Query: 2619 SWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQK 2440
+WPLPVN+KRL+ NAQKTFKVDFRR SD+HP+EIV++VDKLQERLKVV G D LS+EAQK
Sbjct: 973 NWPLPVNLKRLIWNAQKTFKVDFRRVSDLHPVEIVDSVDKLQERLKVVPGTDPLSVEAQK 1032
Query: 2439 NATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSI 2260
NATLFF+ILLRS LASKRVL+EYRLT+EAFEWVIGEIESRFLQSLVA GEMIGCVAAQSI
Sbjct: 1033 NATLFFSILLRSTLASKRVLQEYRLTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSI 1092
Query: 2259 GEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAK 2080
GEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL P+ SKTKE+AK
Sbjct: 1093 GEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLSPEASKTKEKAK 1152
Query: 2079 NVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLR 1900
NVQCALEYTTLRSVT ATEVWYDPDP ST+IEED++FVKSYYEMPDEE+ P+KISPWLLR
Sbjct: 1153 NVQCALEYTTLRSVTHATEVWYDPDPTSTIIEEDIDFVKSYYEMPDEEVAPEKISPWLLR 1212
Query: 1899 IELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELND 1720
IELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDE PKGELND
Sbjct: 1213 IELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEGPKGELND 1272
Query: 1719 ESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGV 1540
ESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+SK +KFDE DG+K EW+LDTEGV
Sbjct: 1273 ESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHSKASKFDEADGYKTGEEWVLDTEGV 1332
Query: 1539 NLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAIL 1360
NLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAIL
Sbjct: 1333 NLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAIL 1392
Query: 1359 CDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLG 1180
CDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE+D LRGVTENIMLG
Sbjct: 1393 CDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESDYLRGVTENIMLG 1452
Query: 1179 QLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGTPYHDGMMSPNY 1000
QLAPIGTGDCAL LN+EMLK AIE+ LPSYME GL+FGMTPARSP++GTPYH+GMMSP+Y
Sbjct: 1453 QLAPIGTGDCALYLNDEMLKNAIELQLPSYME-GLEFGMTPARSPVSGTPYHEGMMSPSY 1511
Query: 999 LLSPNLRLSPVTDAQFSPYVGGMAF 925
LLSPNLRLSP+TDAQFSPYVGGMAF
Sbjct: 1512 LLSPNLRLSPITDAQFSPYVGGMAF 1536
>ref|XP_006467031.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X5
[Citrus sinensis]
Length = 1963
Score = 2018 bits (5228), Expect = 0.0
Identities = 998/1104 (90%), Positives = 1053/1104 (95%)
Frame = -2
Query: 4236 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 4057
KSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN
Sbjct: 433 KSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 492
Query: 4056 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 3877
ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDT
Sbjct: 493 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDT 552
Query: 3876 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQENE 3697
FIEKDVFMNILMWWEDFDGKVP P ILKPRPLWTGKQVFNLIIPKQINL R +AWH +N+
Sbjct: 553 FIEKDVFMNILMWWEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQINLFRTAAWHADND 612
Query: 3696 KGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 3517
KG +T GDT VRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 613 KGILTAGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 672
Query: 3516 YWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTMMESF 3337
YWLLQNAFSIGIGDTIADA TME IN+TIS AKN VK LI+ AQ+K LE EPGRTMMESF
Sbjct: 673 YWLLQNAFSIGIGDTIADAKTMETINDTISKAKNNVKNLIKQAQDKSLEPEPGRTMMESF 732
Query: 3336 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 3157
EN+VNQVLN ARD+AGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 733 ENKVNQVLNTARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 792
Query: 3156 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 2977
IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 793 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 852
Query: 2976 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLKRTDFN 2797
GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQ L+SLK+K+++F+
Sbjct: 853 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQTLDSLKMKKSEFD 912
Query: 2796 DMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNS 2617
+++E+D NWNPNYML E ++DLKTI+E+R VFDAEVQKLEADR+QL TEIAT+GD+S
Sbjct: 913 KAFRFEMDEENWNPNYMLQEYIDDLKTIKELRDVFDAEVQKLEADRYQLATEIATSGDSS 972
Query: 2616 WPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQKN 2437
WPLPVN+KRL+ NAQKTFKVD RRPSDMHPME+VEAVDKLQERLKVV G+D LS+EAQKN
Sbjct: 973 WPLPVNLKRLIWNAQKTFKVDPRRPSDMHPMEVVEAVDKLQERLKVVPGEDPLSVEAQKN 1032
Query: 2436 ATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSIG 2257
ATLFFNILLRS ASKRVLKE+RLTREAFEWVIGEIESRFLQSLVA GEMIGCVAAQSIG
Sbjct: 1033 ATLFFNILLRSTFASKRVLKEHRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 1092
Query: 2256 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKN 2077
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+LKP V+ TKERAKN
Sbjct: 1093 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLKPGVNSTKERAKN 1152
Query: 2076 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 1897
VQCALEYTTLRSVT+ATEVWYDPDPM T+IEEDVEFVKSYYEMPDE+I P+KISPWLLRI
Sbjct: 1153 VQCALEYTTLRSVTEATEVWYDPDPMGTIIEEDVEFVKSYYEMPDEDIAPEKISPWLLRI 1212
Query: 1896 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDE 1717
ELNREMMVDKKLSMA +AEKIN EFDDDLTCIFNDDNA+KLILRIRIMNDEAPKGELNDE
Sbjct: 1213 ELNREMMVDKKLSMAAVAEKINQEFDDDLTCIFNDDNADKLILRIRIMNDEAPKGELNDE 1272
Query: 1716 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGVN 1537
SAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K K+D+N+GFK+E+EWMLDTEGVN
Sbjct: 1273 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKKGKTTKYDDNEGFKSEDEWMLDTEGVN 1332
Query: 1536 LLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILC 1357
LLAVMCHEDVDARRTTSNHLIE+IEVLGIEAVR+ALLDELRVVISFDGSYVNYRHLAILC
Sbjct: 1333 LLAVMCHEDVDARRTTSNHLIEIIEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILC 1392
Query: 1356 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLGQ 1177
DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAE+D LRGVTENIMLGQ
Sbjct: 1393 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDYLRGVTENIMLGQ 1452
Query: 1176 LAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGTPYHDGMMSPNYL 997
LAPIGTGDC+L LN+EMLK AIE+ LPSYME GL+FGMTPARSP++GTPYHDGMMSP YL
Sbjct: 1453 LAPIGTGDCSLYLNDEMLKNAIELQLPSYME-GLEFGMTPARSPVSGTPYHDGMMSPGYL 1511
Query: 996 LSPNLRLSPVTDAQFSPYVGGMAF 925
SPNLRLSPVTDAQFSPYVGGMAF
Sbjct: 1512 FSPNLRLSPVTDAQFSPYVGGMAF 1535
>ref|XP_006467030.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X4
[Citrus sinensis]
Length = 1853
Score = 2018 bits (5228), Expect = 0.0
Identities = 998/1104 (90%), Positives = 1053/1104 (95%)
Frame = -2
Query: 4236 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 4057
KSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN
Sbjct: 433 KSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 492
Query: 4056 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 3877
ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDT
Sbjct: 493 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDT 552
Query: 3876 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQENE 3697
FIEKDVFMNILMWWEDFDGKVP P ILKPRPLWTGKQVFNLIIPKQINL R +AWH +N+
Sbjct: 553 FIEKDVFMNILMWWEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQINLFRTAAWHADND 612
Query: 3696 KGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 3517
KG +T GDT VRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 613 KGILTAGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 672
Query: 3516 YWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTMMESF 3337
YWLLQNAFSIGIGDTIADA TME IN+TIS AKN VK LI+ AQ+K LE EPGRTMMESF
Sbjct: 673 YWLLQNAFSIGIGDTIADAKTMETINDTISKAKNNVKNLIKQAQDKSLEPEPGRTMMESF 732
Query: 3336 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 3157
EN+VNQVLN ARD+AGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 733 ENKVNQVLNTARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 792
Query: 3156 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 2977
IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 793 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 852
Query: 2976 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLKRTDFN 2797
GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQ L+SLK+K+++F+
Sbjct: 853 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQTLDSLKMKKSEFD 912
Query: 2796 DMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNS 2617
+++E+D NWNPNYML E ++DLKTI+E+R VFDAEVQKLEADR+QL TEIAT+GD+S
Sbjct: 913 KAFRFEMDEENWNPNYMLQEYIDDLKTIKELRDVFDAEVQKLEADRYQLATEIATSGDSS 972
Query: 2616 WPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQKN 2437
WPLPVN+KRL+ NAQKTFKVD RRPSDMHPME+VEAVDKLQERLKVV G+D LS+EAQKN
Sbjct: 973 WPLPVNLKRLIWNAQKTFKVDPRRPSDMHPMEVVEAVDKLQERLKVVPGEDPLSVEAQKN 1032
Query: 2436 ATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSIG 2257
ATLFFNILLRS ASKRVLKE+RLTREAFEWVIGEIESRFLQSLVA GEMIGCVAAQSIG
Sbjct: 1033 ATLFFNILLRSTFASKRVLKEHRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 1092
Query: 2256 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKN 2077
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+LKP V+ TKERAKN
Sbjct: 1093 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLKPGVNSTKERAKN 1152
Query: 2076 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 1897
VQCALEYTTLRSVT+ATEVWYDPDPM T+IEEDVEFVKSYYEMPDE+I P+KISPWLLRI
Sbjct: 1153 VQCALEYTTLRSVTEATEVWYDPDPMGTIIEEDVEFVKSYYEMPDEDIAPEKISPWLLRI 1212
Query: 1896 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDE 1717
ELNREMMVDKKLSMA +AEKIN EFDDDLTCIFNDDNA+KLILRIRIMNDEAPKGELNDE
Sbjct: 1213 ELNREMMVDKKLSMAAVAEKINQEFDDDLTCIFNDDNADKLILRIRIMNDEAPKGELNDE 1272
Query: 1716 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGVN 1537
SAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K K+D+N+GFK+E+EWMLDTEGVN
Sbjct: 1273 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKKGKTTKYDDNEGFKSEDEWMLDTEGVN 1332
Query: 1536 LLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILC 1357
LLAVMCHEDVDARRTTSNHLIE+IEVLGIEAVR+ALLDELRVVISFDGSYVNYRHLAILC
Sbjct: 1333 LLAVMCHEDVDARRTTSNHLIEIIEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILC 1392
Query: 1356 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLGQ 1177
DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAE+D LRGVTENIMLGQ
Sbjct: 1393 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDYLRGVTENIMLGQ 1452
Query: 1176 LAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGTPYHDGMMSPNYL 997
LAPIGTGDC+L LN+EMLK AIE+ LPSYME GL+FGMTPARSP++GTPYHDGMMSP YL
Sbjct: 1453 LAPIGTGDCSLYLNDEMLKNAIELQLPSYME-GLEFGMTPARSPVSGTPYHDGMMSPGYL 1511
Query: 996 LSPNLRLSPVTDAQFSPYVGGMAF 925
SPNLRLSPVTDAQFSPYVGGMAF
Sbjct: 1512 FSPNLRLSPVTDAQFSPYVGGMAF 1535
>ref|XP_006467029.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X3
[Citrus sinensis]
Length = 1790
Score = 2018 bits (5228), Expect = 0.0
Identities = 998/1104 (90%), Positives = 1053/1104 (95%)
Frame = -2
Query: 4236 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 4057
KSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN
Sbjct: 433 KSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 492
Query: 4056 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 3877
ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDT
Sbjct: 493 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDT 552
Query: 3876 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQENE 3697
FIEKDVFMNILMWWEDFDGKVP P ILKPRPLWTGKQVFNLIIPKQINL R +AWH +N+
Sbjct: 553 FIEKDVFMNILMWWEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQINLFRTAAWHADND 612
Query: 3696 KGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 3517
KG +T GDT VRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 613 KGILTAGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 672
Query: 3516 YWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTMMESF 3337
YWLLQNAFSIGIGDTIADA TME IN+TIS AKN VK LI+ AQ+K LE EPGRTMMESF
Sbjct: 673 YWLLQNAFSIGIGDTIADAKTMETINDTISKAKNNVKNLIKQAQDKSLEPEPGRTMMESF 732
Query: 3336 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 3157
EN+VNQVLN ARD+AGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 733 ENKVNQVLNTARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 792
Query: 3156 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 2977
IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 793 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 852
Query: 2976 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLKRTDFN 2797
GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQ L+SLK+K+++F+
Sbjct: 853 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQTLDSLKMKKSEFD 912
Query: 2796 DMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNS 2617
+++E+D NWNPNYML E ++DLKTI+E+R VFDAEVQKLEADR+QL TEIAT+GD+S
Sbjct: 913 KAFRFEMDEENWNPNYMLQEYIDDLKTIKELRDVFDAEVQKLEADRYQLATEIATSGDSS 972
Query: 2616 WPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQKN 2437
WPLPVN+KRL+ NAQKTFKVD RRPSDMHPME+VEAVDKLQERLKVV G+D LS+EAQKN
Sbjct: 973 WPLPVNLKRLIWNAQKTFKVDPRRPSDMHPMEVVEAVDKLQERLKVVPGEDPLSVEAQKN 1032
Query: 2436 ATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSIG 2257
ATLFFNILLRS ASKRVLKE+RLTREAFEWVIGEIESRFLQSLVA GEMIGCVAAQSIG
Sbjct: 1033 ATLFFNILLRSTFASKRVLKEHRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 1092
Query: 2256 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKN 2077
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+LKP V+ TKERAKN
Sbjct: 1093 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLKPGVNSTKERAKN 1152
Query: 2076 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 1897
VQCALEYTTLRSVT+ATEVWYDPDPM T+IEEDVEFVKSYYEMPDE+I P+KISPWLLRI
Sbjct: 1153 VQCALEYTTLRSVTEATEVWYDPDPMGTIIEEDVEFVKSYYEMPDEDIAPEKISPWLLRI 1212
Query: 1896 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDE 1717
ELNREMMVDKKLSMA +AEKIN EFDDDLTCIFNDDNA+KLILRIRIMNDEAPKGELNDE
Sbjct: 1213 ELNREMMVDKKLSMAAVAEKINQEFDDDLTCIFNDDNADKLILRIRIMNDEAPKGELNDE 1272
Query: 1716 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGVN 1537
SAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K K+D+N+GFK+E+EWMLDTEGVN
Sbjct: 1273 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKKGKTTKYDDNEGFKSEDEWMLDTEGVN 1332
Query: 1536 LLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILC 1357
LLAVMCHEDVDARRTTSNHLIE+IEVLGIEAVR+ALLDELRVVISFDGSYVNYRHLAILC
Sbjct: 1333 LLAVMCHEDVDARRTTSNHLIEIIEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILC 1392
Query: 1356 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLGQ 1177
DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAE+D LRGVTENIMLGQ
Sbjct: 1393 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDYLRGVTENIMLGQ 1452
Query: 1176 LAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGTPYHDGMMSPNYL 997
LAPIGTGDC+L LN+EMLK AIE+ LPSYME GL+FGMTPARSP++GTPYHDGMMSP YL
Sbjct: 1453 LAPIGTGDCSLYLNDEMLKNAIELQLPSYME-GLEFGMTPARSPVSGTPYHDGMMSPGYL 1511
Query: 996 LSPNLRLSPVTDAQFSPYVGGMAF 925
SPNLRLSPVTDAQFSPYVGGMAF
Sbjct: 1512 FSPNLRLSPVTDAQFSPYVGGMAF 1535
>ref|XP_006467027.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X1
[Citrus sinensis] gi|568825318|ref|XP_006467028.1|
PREDICTED: DNA-directed RNA polymerase II subunit 1-like
isoform X2 [Citrus sinensis]
Length = 1860
Score = 2018 bits (5228), Expect = 0.0
Identities = 998/1104 (90%), Positives = 1053/1104 (95%)
Frame = -2
Query: 4236 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 4057
KSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN
Sbjct: 433 KSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 492
Query: 4056 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 3877
ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDT
Sbjct: 493 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDT 552
Query: 3876 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQENE 3697
FIEKDVFMNILMWWEDFDGKVP P ILKPRPLWTGKQVFNLIIPKQINL R +AWH +N+
Sbjct: 553 FIEKDVFMNILMWWEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQINLFRTAAWHADND 612
Query: 3696 KGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 3517
KG +T GDT VRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 613 KGILTAGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 672
Query: 3516 YWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTMMESF 3337
YWLLQNAFSIGIGDTIADA TME IN+TIS AKN VK LI+ AQ+K LE EPGRTMMESF
Sbjct: 673 YWLLQNAFSIGIGDTIADAKTMETINDTISKAKNNVKNLIKQAQDKSLEPEPGRTMMESF 732
Query: 3336 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 3157
EN+VNQVLN ARD+AGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 733 ENKVNQVLNTARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 792
Query: 3156 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 2977
IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 793 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 852
Query: 2976 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLKRTDFN 2797
GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQ L+SLK+K+++F+
Sbjct: 853 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQTLDSLKMKKSEFD 912
Query: 2796 DMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNS 2617
+++E+D NWNPNYML E ++DLKTI+E+R VFDAEVQKLEADR+QL TEIAT+GD+S
Sbjct: 913 KAFRFEMDEENWNPNYMLQEYIDDLKTIKELRDVFDAEVQKLEADRYQLATEIATSGDSS 972
Query: 2616 WPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQKN 2437
WPLPVN+KRL+ NAQKTFKVD RRPSDMHPME+VEAVDKLQERLKVV G+D LS+EAQKN
Sbjct: 973 WPLPVNLKRLIWNAQKTFKVDPRRPSDMHPMEVVEAVDKLQERLKVVPGEDPLSVEAQKN 1032
Query: 2436 ATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSIG 2257
ATLFFNILLRS ASKRVLKE+RLTREAFEWVIGEIESRFLQSLVA GEMIGCVAAQSIG
Sbjct: 1033 ATLFFNILLRSTFASKRVLKEHRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 1092
Query: 2256 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKN 2077
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+LKP V+ TKERAKN
Sbjct: 1093 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLKPGVNSTKERAKN 1152
Query: 2076 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 1897
VQCALEYTTLRSVT+ATEVWYDPDPM T+IEEDVEFVKSYYEMPDE+I P+KISPWLLRI
Sbjct: 1153 VQCALEYTTLRSVTEATEVWYDPDPMGTIIEEDVEFVKSYYEMPDEDIAPEKISPWLLRI 1212
Query: 1896 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDE 1717
ELNREMMVDKKLSMA +AEKIN EFDDDLTCIFNDDNA+KLILRIRIMNDEAPKGELNDE
Sbjct: 1213 ELNREMMVDKKLSMAAVAEKINQEFDDDLTCIFNDDNADKLILRIRIMNDEAPKGELNDE 1272
Query: 1716 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGVN 1537
SAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K K+D+N+GFK+E+EWMLDTEGVN
Sbjct: 1273 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKKGKTTKYDDNEGFKSEDEWMLDTEGVN 1332
Query: 1536 LLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILC 1357
LLAVMCHEDVDARRTTSNHLIE+IEVLGIEAVR+ALLDELRVVISFDGSYVNYRHLAILC
Sbjct: 1333 LLAVMCHEDVDARRTTSNHLIEIIEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILC 1392
Query: 1356 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLGQ 1177
DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAE+D LRGVTENIMLGQ
Sbjct: 1393 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDYLRGVTENIMLGQ 1452
Query: 1176 LAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGTPYHDGMMSPNYL 997
LAPIGTGDC+L LN+EMLK AIE+ LPSYME GL+FGMTPARSP++GTPYHDGMMSP YL
Sbjct: 1453 LAPIGTGDCSLYLNDEMLKNAIELQLPSYME-GLEFGMTPARSPVSGTPYHDGMMSPGYL 1511
Query: 996 LSPNLRLSPVTDAQFSPYVGGMAF 925
SPNLRLSPVTDAQFSPYVGGMAF
Sbjct: 1512 FSPNLRLSPVTDAQFSPYVGGMAF 1535
>ref|XP_006425357.1| hypothetical protein CICLE_v10024686mg [Citrus clementina]
gi|557527347|gb|ESR38597.1| hypothetical protein
CICLE_v10024686mg [Citrus clementina]
Length = 1860
Score = 2018 bits (5228), Expect = 0.0
Identities = 998/1104 (90%), Positives = 1053/1104 (95%)
Frame = -2
Query: 4236 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 4057
KSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN
Sbjct: 433 KSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 492
Query: 4056 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 3877
ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDT
Sbjct: 493 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDT 552
Query: 3876 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQENE 3697
FIEKDVFMNILMWWEDFDGKVP P ILKPRPLWTGKQVFNLIIPKQINL R +AWH +N+
Sbjct: 553 FIEKDVFMNILMWWEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQINLFRTAAWHADND 612
Query: 3696 KGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 3517
KG +T GDT VRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 613 KGILTAGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 672
Query: 3516 YWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTMMESF 3337
YWLLQNAFSIGIGDTIADA TME IN+TIS AKN VK LI+ AQ+K LE EPGRTMMESF
Sbjct: 673 YWLLQNAFSIGIGDTIADAKTMETINDTISKAKNNVKNLIKQAQDKSLEPEPGRTMMESF 732
Query: 3336 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 3157
EN+VNQVLN ARD+AGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 733 ENKVNQVLNTARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 792
Query: 3156 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 2977
IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 793 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 852
Query: 2976 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLKRTDFN 2797
GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQ L+SLK+K+++F+
Sbjct: 853 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQTLDSLKMKKSEFD 912
Query: 2796 DMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNS 2617
+++E+D NWNPNYML E ++DLKTI+E+R VFDAEVQKLEADR+QL TEIAT+GD+S
Sbjct: 913 KAFRFEMDEENWNPNYMLQEYIDDLKTIKELRDVFDAEVQKLEADRYQLATEIATSGDSS 972
Query: 2616 WPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQKN 2437
WPLPVN+KRL+ NAQKTFKVD RRPSDMHPME+VEAVDKLQERLKVV G+D LS+EAQKN
Sbjct: 973 WPLPVNLKRLIWNAQKTFKVDPRRPSDMHPMEVVEAVDKLQERLKVVPGEDPLSVEAQKN 1032
Query: 2436 ATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSIG 2257
ATLFFNILLRS ASKRVLKE+RLTREAFEWVIGEIESRFLQSLVA GEMIGCVAAQSIG
Sbjct: 1033 ATLFFNILLRSTFASKRVLKEHRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 1092
Query: 2256 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKN 2077
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+LKP V+ TKERAKN
Sbjct: 1093 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLKPGVNSTKERAKN 1152
Query: 2076 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 1897
VQCALEYTTLRSVT+ATEVWYDPDPM T+IEEDVEFVKSYYEMPDE+I P+KISPWLLRI
Sbjct: 1153 VQCALEYTTLRSVTEATEVWYDPDPMGTIIEEDVEFVKSYYEMPDEDIAPEKISPWLLRI 1212
Query: 1896 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDE 1717
ELNREMMVDKKLSMA +AEKIN EFDDDLTCIFNDDNA+KLILRIRIMNDEAPKGELNDE
Sbjct: 1213 ELNREMMVDKKLSMAAVAEKINQEFDDDLTCIFNDDNADKLILRIRIMNDEAPKGELNDE 1272
Query: 1716 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGVN 1537
SAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K K+D+N+GFK+E+EWMLDTEGVN
Sbjct: 1273 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKKGKTTKYDDNEGFKSEDEWMLDTEGVN 1332
Query: 1536 LLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILC 1357
LLAVMCHEDVDARRTTSNHLIE+IEVLGIEAVR+ALLDELRVVISFDGSYVNYRHLAILC
Sbjct: 1333 LLAVMCHEDVDARRTTSNHLIEIIEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILC 1392
Query: 1356 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLGQ 1177
DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAE+D LRGVTENIMLGQ
Sbjct: 1393 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDYLRGVTENIMLGQ 1452
Query: 1176 LAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGTPYHDGMMSPNYL 997
LAPIGTGDC+L LN+EMLK AIE+ LPSYME GL+FGMTPARSP++GTPYHDGMMSP YL
Sbjct: 1453 LAPIGTGDCSLYLNDEMLKNAIELQLPSYME-GLEFGMTPARSPVSGTPYHDGMMSPGYL 1511
Query: 996 LSPNLRLSPVTDAQFSPYVGGMAF 925
SPNLRLSPVTDAQFSPYVGGMAF
Sbjct: 1512 FSPNLRLSPVTDAQFSPYVGGMAF 1535