BLASTX nr result

ID: Rehmannia25_contig00002376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00002376
         (474 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006349883.1| PREDICTED: uncharacterized protein C1235.01-...    79   8e-13
emb|CBI16392.3| unnamed protein product [Vitis vinifera]               60   2e-07

>ref|XP_006349883.1| PREDICTED: uncharacterized protein C1235.01-like [Solanum
           tuberosum]
          Length = 234

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 53/131 (40%), Positives = 61/131 (46%)
 Frame = -3

Query: 460 TCNSREVVVKGMEVVETCSSREVEEMVMVAGEICSSTVEVVKEMEEVGTCSNXXXXXXXX 281
           TC+S+  VVK M   ETCSSR VEEM MV    CSS VE  K ME   TCS+        
Sbjct: 66  TCSSKVGVVKVMVEEETCSSRVVEEMKMVVVVTCSSMVEGEKAMEVGETCSSMEVVEKVT 125

Query: 280 XXVGTCSSXXXXXXXXXXXETCNSREAEVMVMVVVGTCNSKXXXXXXXXXEGTCSSMAEE 101
               TCSS            TC+S+   VM MVVV TCNS              +S+  +
Sbjct: 126 VEEATCSSKVGVVMEMVEEGTCSSKVVGVMAMVVVETCNSMVEEEMVMVVVVIYNSIQVQ 185

Query: 100 ETTMVVEGTCN 68
              MVV   CN
Sbjct: 186 VLVMVVVVICN 196



 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 52/134 (38%), Positives = 61/134 (45%)
 Frame = -3

Query: 469 VVETCNSREVVVKGMEVVETCSSREVEEMVMVAGEICSSTVEVVKEMEEVGTCSNXXXXX 290
           VV TC+S     K MEV ETCSS EV E V V    CSS V VV EM E GTCS+     
Sbjct: 95  VVVTCSSMVEGEKAMEVGETCSSMEVVEKVTVEEATCSSKVGVVMEMVEEGTCSSKVVGV 154

Query: 289 XXXXXVGTCSSXXXXXXXXXXXETCNSREAEVMVMVVVGTCNSKXXXXXXXXXEGTCSSM 110
                V TC+S              NS + +V+VMVVV  CNS              +S+
Sbjct: 155 MAMVVVETCNSMVEEEMVMVVVVIYNSIQVQVLVMVVVVICNSIQVQVLAMVEVEIYNSI 214

Query: 109 AEEETTMVVEGTCN 68
             +   MV    CN
Sbjct: 215 PVQVLVMVEVEICN 228



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 51/131 (38%), Positives = 60/131 (45%)
 Frame = -3

Query: 460 TCNSREVVVKGMEVVETCSSREVEEMVMVAGEICSSTVEVVKEMEEVGTCSNXXXXXXXX 281
           +C+++E        VE+ SS+EV E V V    CSS V VVK M E  TCS+        
Sbjct: 34  SCSNKEEEETLRVEVESDSSKEVVEKVTVEEATCSSKVGVVKVMVEEETCSSRVVEEMKM 93

Query: 280 XXVGTCSSXXXXXXXXXXXETCNSREAEVMVMVVVGTCNSKXXXXXXXXXEGTCSSMAEE 101
             V TCSS           ETC+S E    V V   TC+SK         EGTCSS    
Sbjct: 94  VVVVTCSSMVEGEKAMEVGETCSSMEVVEKVTVEEATCSSKVGVVMEMVEEGTCSSKVVG 153

Query: 100 ETTMVVEGTCN 68
              MVV  TCN
Sbjct: 154 VMAMVVVETCN 164


>emb|CBI16392.3| unnamed protein product [Vitis vinifera]
          Length = 253

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 48/132 (36%), Positives = 52/132 (39%)
 Frame = -3

Query: 469 VVETCNSREVVVKGMEVVETCSSREVEEMVMVAGEICSSTVEVVKEMEEVGTCSNXXXXX 290
           VVE C  +E  V  ME V T    E   MV V   IC   VE VKEMEEV  C +     
Sbjct: 19  VVEICEYKEGEVMVMEEVGTYRYMEEVVMVKVVVVICRCKVEEVKEMEEVVNCKHTEEEV 78

Query: 289 XXXXXVGTCSSXXXXXXXXXXXETCNSREAEVMVMVVVGTCNSKXXXXXXXXXEGTCSSM 110
                V  C                  +E EVMVM  V  C+SK           TCSS 
Sbjct: 79  REMVVVVNCKHTEVEVREMVVVGIYKCKEGEVMVMEEVVICSSKVVAEREMEEVETCSSN 138

Query: 109 AEEETTMVVEGT 74
             EE  M V GT
Sbjct: 139 EVEEMVMRVVGT 150



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 50/149 (33%), Positives = 57/149 (38%), Gaps = 16/149 (10%)
 Frame = -3

Query: 469 VVETCNSREVVVKGMEVVETCSSREVEEMVMVAGEICSSTVEVVKEMEEVGTCSNXXXXX 290
           VV  C   EV V+ M VV     +E E MVM    ICSS V   +EMEEV TCS+     
Sbjct: 83  VVVNCKHTEVEVREMVVVGIYKCKEGEVMVMEEVVICSSKVVAEREMEEVETCSSNEVEE 142

Query: 289 XXXXXVGTCSSXXXXXXXXXXXETCNSR----------------EAEVMVMVVVGTCNSK 158
                VGT SS             C+++                E EVM M VVG    K
Sbjct: 143 MVMRVVGTYSSMENVVMVMVVEVICSNKVGEAMEKVVVETYRHMEEEVMGMEVVGIYKCK 202

Query: 157 XXXXXXXXXEGTCSSMAEEETTMVVEGTC 71
                     G C  M E E   VV   C
Sbjct: 203 EAEVMKKVVVGICRHMEEVEMERVVVVIC 231


Top