BLASTX nr result

ID: Rehmannia25_contig00002375 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00002375
         (453 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006349883.1| PREDICTED: uncharacterized protein C1235.01-...    53   7e-10

>ref|XP_006349883.1| PREDICTED: uncharacterized protein C1235.01-like [Solanum
           tuberosum]
          Length = 234

 Score = 48.1 bits (113), Expect(2) = 7e-10
 Identities = 30/67 (44%), Positives = 35/67 (52%)
 Frame = -3

Query: 211 CSSREAEVMAMVVVGTCNSKVVVEMEMAVEGTYSSMAEEETTMVVEGICSSXXXXXXXXX 32
           CSS+   VM MV  GTC+SKVV  M M V  T +SM EEE  MVV  I +S         
Sbjct: 131 CSSKVGVVMEMVEEGTCSSKVVGVMAMVVVETCNSMVEEEMVMVVVVIYNSIQVQVLVMV 190

Query: 31  XXETCSS 11
               C+S
Sbjct: 191 VVVICNS 197



 Score = 40.8 bits (94), Expect(2) = 7e-10
 Identities = 25/49 (51%), Positives = 26/49 (53%)
 Frame = -2

Query: 452 SREVVVKGMEVVETCSSREVEEMAMVAGETCSSRXXXXXXXXXXVTCSS 306
           S+  VVK M   ETCSSR VEEM MV   TCSS            TCSS
Sbjct: 69  SKVGVVKVMVEEETCSSRVVEEMKMVVVVTCSSMVEGEKAMEVGETCSS 117



 Score = 52.8 bits (125), Expect(2) = 1e-08
 Identities = 34/70 (48%), Positives = 35/70 (50%)
 Frame = -3

Query: 211 CSSREAEVMAMVVVGTCNSKVVVEMEMAVEGTYSSMAEEETTMVVEGICSSXXXXXXXXX 32
           CSSR  E M MVVV TC+S V  E  M V  T SSM   E   V E  CSS         
Sbjct: 83  CSSRVVEEMKMVVVVTCSSMVEGEKAMEVGETCSSMEVVEKVTVEEATCSSKVGVVMEMV 142

Query: 31  XXETCSSKVV 2
              TCSSKVV
Sbjct: 143 EEGTCSSKVV 152



 Score = 32.0 bits (71), Expect(2) = 1e-08
 Identities = 19/44 (43%), Positives = 22/44 (50%)
 Frame = -2

Query: 419 VETCSSREVEEMAMVAGETCSSRXXXXXXXXXXVTCSSTVEGEM 288
           VE+ SS+EV E   V   TCSS+           TCSS V  EM
Sbjct: 48  VESDSSKEVVEKVTVEEATCSSKVGVVKVMVEEETCSSRVVEEM 91



 Score = 40.4 bits (93), Expect(2) = 3e-07
 Identities = 26/54 (48%), Positives = 28/54 (51%)
 Frame = -2

Query: 452 SREVVVKGMEVVETCSSREVEEMAMVAGETCSSRXXXXXXXXXXVTCSSTVEGE 291
           S+EVV K      TCSS+      MV  ETCSSR          VTCSS VEGE
Sbjct: 53  SKEVVEKVTVEEATCSSKVGVVKVMVEEETCSSRVVEEMKMVVVVTCSSMVEGE 106



 Score = 39.7 bits (91), Expect(2) = 3e-07
 Identities = 24/51 (47%), Positives = 26/51 (50%)
 Frame = -3

Query: 211 CSSREAEVMAMVVVGTCNSKVVVEMEMAVEGTYSSMAEEETTMVVEGICSS 59
           CSS E      V   TC+SKV V MEM  EGT SS       MVV   C+S
Sbjct: 115 CSSMEVVEKVTVEEATCSSKVGVVMEMVEEGTCSSKVVGVMAMVVVETCNS 165



 Score = 52.4 bits (124), Expect(2) = 8e-07
 Identities = 32/69 (46%), Positives = 36/69 (52%)
 Frame = -3

Query: 211 CSSREAEVMAMVVVGTCNSKVVVEMEMAVEGTYSSMAEEETTMVVEGICSSXXXXXXXXX 32
           CSS+   V  MV   TC+S+VV EM+M V  T SSM E E  M V   CSS         
Sbjct: 67  CSSKVGVVKVMVEEETCSSRVVEEMKMVVVVTCSSMVEGEKAMEVGETCSSMEVVEKVTV 126

Query: 31  XXETCSSKV 5
              TCSSKV
Sbjct: 127 EEATCSSKV 135



 Score = 26.2 bits (56), Expect(2) = 8e-07
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = -2

Query: 446 EVVVKGMEVVETCSSREVEEMAMVAGETCSSRXXXXXXXXXXVTCSSTV 300
           E V+  +E V +CS++E EE   V  E+ SS+           TCSS V
Sbjct: 24  EEVISLVEEV-SCSNKEEEETLRVEVESDSSKEVVEKVTVEEATCSSKV 71


Top