BLASTX nr result
ID: Rehmannia25_contig00001674
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00001674
(566 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004506980.1| PREDICTED: mediator of RNA polymerase II tra... 137 1e-30
gb|EPS63045.1| hypothetical protein M569_11742, partial [Genlise... 128 1e-27
ref|XP_006416880.1| hypothetical protein EUTSA_v10008460mg [Eutr... 119 7e-25
ref|XP_006416879.1| hypothetical protein EUTSA_v10008460mg [Eutr... 119 7e-25
ref|XP_003604335.1| hypothetical protein MTR_4g009710 [Medicago ... 119 7e-25
ref|XP_004486634.1| PREDICTED: uncharacterized protein LOC101503... 117 2e-24
ref|XP_004486633.1| PREDICTED: uncharacterized protein LOC101503... 117 2e-24
ref|XP_004236821.1| PREDICTED: uncharacterized protein LOC101257... 112 6e-23
ref|XP_006359328.1| PREDICTED: mediator of RNA polymerase II tra... 111 1e-22
ref|XP_006359327.1| PREDICTED: mediator of RNA polymerase II tra... 111 1e-22
ref|XP_006359326.1| PREDICTED: mediator of RNA polymerase II tra... 111 1e-22
ref|XP_006389363.1| hypothetical protein POPTR_0027s00370g [Popu... 110 2e-22
ref|XP_006385271.1| hypothetical protein POPTR_0003s02320g [Popu... 110 3e-22
ref|XP_002303194.2| hypothetical protein POPTR_0003s01980g, part... 109 4e-22
ref|XP_006389371.1| hypothetical protein POPTR_0027s00430g [Popu... 109 4e-22
ref|XP_006389370.1| hypothetical protein POPTR_0027s00430g [Popu... 109 4e-22
ref|XP_006389369.1| hypothetical protein POPTR_0027s00430g [Popu... 109 4e-22
gb|ABK95291.1| unknown [Populus trichocarpa] 108 1e-21
ref|XP_002530460.1| transcription cofactor, putative [Ricinus co... 107 2e-21
ref|XP_002298205.2| hypothetical protein POPTR_0001s21210g [Popu... 106 5e-21
>ref|XP_004506980.1| PREDICTED: mediator of RNA polymerase II transcription subunit
15a-like [Cicer arietinum]
Length = 1503
Score = 137 bits (346), Expect = 1e-30
Identities = 91/224 (40%), Positives = 125/224 (55%), Gaps = 37/224 (16%)
Frame = -2
Query: 562 SWADYLRKISLKMLTMETITADT------------SXXXXXXXXXXPMVSNQSQLVIGSD 419
S +DYLRKIS+KMLTMET + + S M SN + G++
Sbjct: 73 SQSDYLRKISMKMLTMETKSQSSIANNMPSNEGGPSNKPPDQDNSHLMDSNNWRPNPGTE 132
Query: 418 AMAAPDIDGGDWRTQIRPDFRERIVNKIVETLKRHISSSGQAELLQELEEISVRFEEKIY 239
P ID +WR Q++PD R+RIVNKI++TLK+H+ SG LL EL +I+ RFEEKI+
Sbjct: 133 ----PTIDTSEWRAQLQPDSRQRIVNKIMDTLKKHLPVSGSEGLL-ELWKIAQRFEEKIF 187
Query: 238 MEAETQNDYLRKISLKMLTLGPQIQNRV-QRLPI--------PAVSDQSQVIG------- 107
A +Q+DYLRKIS+KMLT+ + Q+ + +P P D S ++
Sbjct: 188 TAATSQSDYLRKISMKMLTMETKSQSSIANNMPSNEGGPSNKPPDQDNSHLMDSNNWRPN 247
Query: 106 ---------GDWRTQLQPDTRQRIVNRILETLMRHSPFSGQAQL 2
+WR QLQPD+RQRIVN+I++TL +H P SG L
Sbjct: 248 PGTEPTIDTSEWRAQLQPDSRQRIVNKIMDTLKKHLPVSGSEGL 291
Score = 121 bits (303), Expect = 1e-25
Identities = 70/160 (43%), Positives = 97/160 (60%), Gaps = 25/160 (15%)
Frame = -2
Query: 406 PDIDGGDWRTQIRPDFRERIVNKIVETLKRHISSSGQAELLQELEEISVRFEEKIYMEAE 227
P ID +WR Q++PD R+RIVNKI++T K+H+ SG LL EL +I+ RFEEKI+ A
Sbjct: 14 PTIDTSEWRAQLQPDSRQRIVNKIMDTSKKHLPVSGSEGLL-ELWKIAQRFEEKIFTAAT 72
Query: 226 TQNDYLRKISLKMLTLGPQIQNRV-QRLPI--------PAVSDQSQVIG----------- 107
+Q+DYLRKIS+KMLT+ + Q+ + +P P D S ++
Sbjct: 73 SQSDYLRKISMKMLTMETKSQSSIANNMPSNEGGPSNKPPDQDNSHLMDSNNWRPNPGTE 132
Query: 106 -----GDWRTQLQPDTRQRIVNRILETLMRHSPFSGQAQL 2
+WR QLQPD+RQRIVN+I++TL +H P SG L
Sbjct: 133 PTIDTSEWRAQLQPDSRQRIVNKIMDTLKKHLPVSGSEGL 172
Score = 106 bits (265), Expect = 4e-21
Identities = 66/148 (44%), Positives = 91/148 (61%), Gaps = 12/148 (8%)
Frame = -2
Query: 562 SWADYLRKISLKMLTMETITADT------------SXXXXXXXXXXPMVSNQSQLVIGSD 419
S +DYLRKIS+KMLTMET + + S M SN + G++
Sbjct: 192 SQSDYLRKISMKMLTMETKSQSSIANNMPSNEGGPSNKPPDQDNSHLMDSNNWRPNPGTE 251
Query: 418 AMAAPDIDGGDWRTQIRPDFRERIVNKIVETLKRHISSSGQAELLQELEEISVRFEEKIY 239
P ID +WR Q++PD R+RIVNKI++TLK+H+ SG LL EL +I+ RFEEKI+
Sbjct: 252 ----PTIDTSEWRAQLQPDSRQRIVNKIMDTLKKHLPVSGSEGLL-ELWKIAQRFEEKIF 306
Query: 238 MEAETQNDYLRKISLKMLTLGPQIQNRV 155
A +Q+DYLRKIS+KMLT+ + Q+ +
Sbjct: 307 TAATSQSDYLRKISMKMLTMETKSQSSI 334
>gb|EPS63045.1| hypothetical protein M569_11742, partial [Genlisea aurea]
Length = 216
Score = 128 bits (321), Expect = 1e-27
Identities = 70/135 (51%), Positives = 94/135 (69%), Gaps = 28/135 (20%)
Frame = -2
Query: 433 VIGSDAMAAPDIDGGDWRTQIRPDFRERIVNKIVETLKRHISSSGQAELLQELEEISVRF 254
VIG++++A P+I+GGDWRTQ++PD R+RIVNKI+ETLKRH+ SG AE LQEL++I+++F
Sbjct: 19 VIGTESLAMPNIEGGDWRTQLQPDSRQRIVNKILETLKRHLPFSG-AEGLQELKKIALKF 77
Query: 253 EEKIYMEAETQNDYLRKISLKMLT----------------------------LGPQIQNR 158
EEKI+ A +Q DYLRKIS+KMLT + Q+QN+
Sbjct: 78 EEKIFTAASSQQDYLRKISMKMLTMEAKSQNPITNSMQPSGGSNLQDHASQSIQSQMQNQ 137
Query: 157 VQRLPIPAVSDQSQV 113
VQ+LPIP VS+QSQV
Sbjct: 138 VQQLPIPMVSNQSQV 152
Score = 63.5 bits (153), Expect = 3e-08
Identities = 28/32 (87%), Positives = 30/32 (93%)
Frame = -2
Query: 109 GGDWRTQLQPDTRQRIVNRILETLMRHSPFSG 14
GGDWRTQLQPD+RQRIVN+ILETL RH PFSG
Sbjct: 32 GGDWRTQLQPDSRQRIVNKILETLKRHLPFSG 63
>ref|XP_006416880.1| hypothetical protein EUTSA_v10008460mg [Eutrema salsugineum]
gi|557094651|gb|ESQ35233.1| hypothetical protein
EUTSA_v10008460mg [Eutrema salsugineum]
Length = 272
Score = 119 bits (297), Expect = 7e-25
Identities = 70/164 (42%), Positives = 94/164 (57%), Gaps = 24/164 (14%)
Frame = -2
Query: 430 IGSDAMAAPDIDGGDWRTQIRPDFRERIVNKIVETLKRHISSSGQAELLQELEEISVRFE 251
+G + + DWRTQ+ PD R++I+NKI ETLK+HI S + E EL IS+RFE
Sbjct: 1 MGPSGEPTMETNTNDWRTQLPPDARQKIINKIWETLKKHIPFS-KPEGDNELRRISIRFE 59
Query: 250 EKIYMEAETQNDYLRKISLKMLTLGPQIQNRVQRLP-IPAVSD----------------- 125
EKIY A +NDYLRKIS+KML++ + QN + IPA D
Sbjct: 60 EKIYSGAVDKNDYLRKISMKMLSMEAKSQNAAGSVSSIPAADDSLPLDLRHLVIDNGNSE 119
Query: 124 ------QSQVIGGDWRTQLQPDTRQRIVNRILETLMRHSPFSGQ 11
+ + DWRT L PD+RQR VN+++ETL +H P+SGQ
Sbjct: 120 PCLPKEEPAMNISDWRTHLPPDSRQRNVNKLMETLKKHVPYSGQ 163
Score = 70.1 bits (170), Expect = 4e-10
Identities = 48/132 (36%), Positives = 71/132 (53%), Gaps = 7/132 (5%)
Frame = -2
Query: 553 DYLRKISLKMLTMETITADTSXXXXXXXXXXPMVS-NQSQLVIGSD------AMAAPDID 395
DYLRKIS+KML+ME + + + + + LVI + P ++
Sbjct: 71 DYLRKISMKMLSMEAKSQNAAGSVSSIPAADDSLPLDLRHLVIDNGNSEPCLPKEEPAMN 130
Query: 394 GGDWRTQIRPDFRERIVNKIVETLKRHISSSGQAELLQELEEISVRFEEKIYMEAETQND 215
DWRT + PD R+R VNK++ETLK+H+ SGQ E + EL I+V FE+ I+ A Q
Sbjct: 131 ISDWRTHLPPDSRQRNVNKLMETLKKHVPYSGQ-EGIDELMRIAVSFEDLIFNTAINQVS 189
Query: 214 YLRKISLKMLTL 179
L K++ + L
Sbjct: 190 LLIKLTCALTYL 201
>ref|XP_006416879.1| hypothetical protein EUTSA_v10008460mg [Eutrema salsugineum]
gi|557094650|gb|ESQ35232.1| hypothetical protein
EUTSA_v10008460mg [Eutrema salsugineum]
Length = 196
Score = 119 bits (297), Expect = 7e-25
Identities = 70/164 (42%), Positives = 94/164 (57%), Gaps = 24/164 (14%)
Frame = -2
Query: 430 IGSDAMAAPDIDGGDWRTQIRPDFRERIVNKIVETLKRHISSSGQAELLQELEEISVRFE 251
+G + + DWRTQ+ PD R++I+NKI ETLK+HI S + E EL IS+RFE
Sbjct: 1 MGPSGEPTMETNTNDWRTQLPPDARQKIINKIWETLKKHIPFS-KPEGDNELRRISIRFE 59
Query: 250 EKIYMEAETQNDYLRKISLKMLTLGPQIQNRVQRLP-IPAVSD----------------- 125
EKIY A +NDYLRKIS+KML++ + QN + IPA D
Sbjct: 60 EKIYSGAVDKNDYLRKISMKMLSMEAKSQNAAGSVSSIPAADDSLPLDLRHLVIDNGNSE 119
Query: 124 ------QSQVIGGDWRTQLQPDTRQRIVNRILETLMRHSPFSGQ 11
+ + DWRT L PD+RQR VN+++ETL +H P+SGQ
Sbjct: 120 PCLPKEEPAMNISDWRTHLPPDSRQRNVNKLMETLKKHVPYSGQ 163
Score = 82.8 bits (203), Expect = 5e-14
Identities = 53/127 (41%), Positives = 73/127 (57%), Gaps = 7/127 (5%)
Frame = -2
Query: 553 DYLRKISLKMLTMETITADTSXXXXXXXXXXPMVS-NQSQLVIGSD------AMAAPDID 395
DYLRKIS+KML+ME + + + + + LVI + P ++
Sbjct: 71 DYLRKISMKMLSMEAKSQNAAGSVSSIPAADDSLPLDLRHLVIDNGNSEPCLPKEEPAMN 130
Query: 394 GGDWRTQIRPDFRERIVNKIVETLKRHISSSGQAELLQELEEISVRFEEKIYMEAETQND 215
DWRT + PD R+R VNK++ETLK+H+ SGQ E + EL I+V FE+ I+ A Q D
Sbjct: 131 ISDWRTHLPPDSRQRNVNKLMETLKKHVPYSGQ-EGIDELMRIAVSFEDLIFNTAINQED 189
Query: 214 YLRKISL 194
YLRKISL
Sbjct: 190 YLRKISL 196
>ref|XP_003604335.1| hypothetical protein MTR_4g009710 [Medicago truncatula]
gi|355505390|gb|AES86532.1| hypothetical protein
MTR_4g009710 [Medicago truncatula]
Length = 314
Score = 119 bits (297), Expect = 7e-25
Identities = 74/155 (47%), Positives = 90/155 (58%), Gaps = 25/155 (16%)
Frame = -2
Query: 406 PDIDGGDWRTQIRPDFRERIVNKIVETLKRHISSSGQAELLQELEEISVRFEEKIYMEAE 227
P D DWRTQ++PD R+RIVNKI++TL+RHI SG LL EL EIS RFE+KIY A
Sbjct: 14 PTTDTVDWRTQLQPDQRQRIVNKIMDTLRRHIPVSGSEGLL-ELLEISQRFEDKIYTSAT 72
Query: 226 TQNDYLRKISLKMLTLGPQIQNRV------------QRLP---IPAVSDQSQVIGG---- 104
+Q DYLR IS KMLT+ + QN + LP + D S +
Sbjct: 73 SQTDYLRTISTKMLTMEIKSQNTMANNMPSNEGGPRNNLPDQDTKDLMDSSNWVANQGTE 132
Query: 103 ------DWRTQLQPDTRQRIVNRILETLMRHSPFS 17
DWRTQLQPD RQRIVN I++TL + P S
Sbjct: 133 SIADTIDWRTQLQPDQRQRIVNNIMDTLRKRLPVS 167
Score = 97.1 bits (240), Expect = 3e-18
Identities = 69/186 (37%), Positives = 101/186 (54%), Gaps = 8/186 (4%)
Frame = -2
Query: 562 SWADYLRKISLKMLTMETITADT---SXXXXXXXXXXPMVSNQSQLVIGSDAMAAPD--- 401
S DYLR IS KMLTME + +T + + ++ ++ S A
Sbjct: 73 SQTDYLRTISTKMLTMEIKSQNTMANNMPSNEGGPRNNLPDQDTKDLMDSSNWVANQGTE 132
Query: 400 --IDGGDWRTQIRPDFRERIVNKIVETLKRHISSSGQAELLQELEEISVRFEEKIYMEAE 227
D DWRTQ++PD R+RIVN I++TL++ + S L+ EL++I+ RFE+KIY A
Sbjct: 133 SIADTIDWRTQLQPDQRQRIVNNIMDTLRKRLPVSSYEGLI-ELQKIAQRFEDKIYTSAT 191
Query: 226 TQNDYLRKISLKMLTLGPQIQNRVQRLPIPAVSDQSQVIGGDWRTQLQPDTRQRIVNRIL 47
+++DYLRKIS KMLT+ + QN V +S SQ GG Q +T Q N +L
Sbjct: 192 SKSDYLRKISTKMLTMENRSQNSVNTQQTNIISLPSQ--GGVNVIQPNLNTHQPGFNMLL 249
Query: 46 ETLMRH 29
+ ++H
Sbjct: 250 QQQLKH 255
>ref|XP_004486634.1| PREDICTED: uncharacterized protein LOC101503108 isoform X2 [Cicer
arietinum]
Length = 215
Score = 117 bits (294), Expect = 2e-24
Identities = 70/162 (43%), Positives = 98/162 (60%), Gaps = 25/162 (15%)
Frame = -2
Query: 412 AAPDIDGGDWRTQIRPDFRERIVNKIVETLKRHISSSGQAELLQELEEISVRFEEKIYME 233
A ++D DWR Q++P+ R+R+VNKI++TLKRH+ SGQ E L EL +I+ RFEEKI+
Sbjct: 12 AENNMDSSDWRGQLQPESRQRVVNKIMDTLKRHLPDSGQ-EGLFELWKIAQRFEEKIFTA 70
Query: 232 AETQNDYLRKISLKMLTLGPQ----IQNRV--------QRLPIPA-------------VS 128
A +Q DYL KISLKMLT+ + + N + + P+P
Sbjct: 71 ATSQPDYLWKISLKMLTMEIKSHGTLANNIPSNQGGPSNKPPVPVNLNLMNSNNWRLNQG 130
Query: 127 DQSQVIGGDWRTQLQPDTRQRIVNRILETLMRHSPFSGQAQL 2
+ + DWR QLQP++RQR+VN+I++TL RH P SGQ L
Sbjct: 131 AEPNMDSSDWRGQLQPESRQRVVNKIMDTLKRHLPDSGQEGL 172
Score = 84.0 bits (206), Expect = 2e-14
Identities = 56/133 (42%), Positives = 74/133 (55%), Gaps = 12/133 (9%)
Frame = -2
Query: 562 SWADYLRKISLKMLTMETITADT------------SXXXXXXXXXXPMVSNQSQLVIGSD 419
S DYL KISLKMLTME + T S M SN +L G++
Sbjct: 73 SQPDYLWKISLKMLTMEIKSHGTLANNIPSNQGGPSNKPPVPVNLNLMNSNNWRLNQGAE 132
Query: 418 AMAAPDIDGGDWRTQIRPDFRERIVNKIVETLKRHISSSGQAELLQELEEISVRFEEKIY 239
P++D DWR Q++P+ R+R+VNKI++TLKRH+ SGQ E L EL +I+ RFEEKI+
Sbjct: 133 ----PNMDSSDWRGQLQPESRQRVVNKIMDTLKRHLPDSGQ-EGLFELRKIAQRFEEKIF 187
Query: 238 MEAETQNDYLRKI 200
A +Q I
Sbjct: 188 TAATSQGTMTNNI 200
>ref|XP_004486633.1| PREDICTED: uncharacterized protein LOC101503108 isoform X1 [Cicer
arietinum]
Length = 234
Score = 117 bits (294), Expect = 2e-24
Identities = 70/162 (43%), Positives = 98/162 (60%), Gaps = 25/162 (15%)
Frame = -2
Query: 412 AAPDIDGGDWRTQIRPDFRERIVNKIVETLKRHISSSGQAELLQELEEISVRFEEKIYME 233
A ++D DWR Q++P+ R+R+VNKI++TLKRH+ SGQ E L EL +I+ RFEEKI+
Sbjct: 12 AENNMDSSDWRGQLQPESRQRVVNKIMDTLKRHLPDSGQ-EGLFELWKIAQRFEEKIFTA 70
Query: 232 AETQNDYLRKISLKMLTLGPQ----IQNRV--------QRLPIPA-------------VS 128
A +Q DYL KISLKMLT+ + + N + + P+P
Sbjct: 71 ATSQPDYLWKISLKMLTMEIKSHGTLANNIPSNQGGPSNKPPVPVNLNLMNSNNWRLNQG 130
Query: 127 DQSQVIGGDWRTQLQPDTRQRIVNRILETLMRHSPFSGQAQL 2
+ + DWR QLQP++RQR+VN+I++TL RH P SGQ L
Sbjct: 131 AEPNMDSSDWRGQLQPESRQRVVNKIMDTLKRHLPDSGQEGL 172
Score = 106 bits (265), Expect = 4e-21
Identities = 68/145 (46%), Positives = 88/145 (60%), Gaps = 12/145 (8%)
Frame = -2
Query: 562 SWADYLRKISLKMLTMETITADT------------SXXXXXXXXXXPMVSNQSQLVIGSD 419
S DYL KISLKMLTME + T S M SN +L G++
Sbjct: 73 SQPDYLWKISLKMLTMEIKSHGTLANNIPSNQGGPSNKPPVPVNLNLMNSNNWRLNQGAE 132
Query: 418 AMAAPDIDGGDWRTQIRPDFRERIVNKIVETLKRHISSSGQAELLQELEEISVRFEEKIY 239
P++D DWR Q++P+ R+R+VNKI++TLKRH+ SGQ E L EL +I+ RFEEKI+
Sbjct: 133 ----PNMDSSDWRGQLQPESRQRVVNKIMDTLKRHLPDSGQ-EGLFELRKIAQRFEEKIF 187
Query: 238 MEAETQNDYLRKISLKMLTLGPQIQ 164
A +Q DYLRKISLKMLT+ + Q
Sbjct: 188 TAATSQPDYLRKISLKMLTMDTKSQ 212
>ref|XP_004236821.1| PREDICTED: uncharacterized protein LOC101257852 [Solanum
lycopersicum]
Length = 1342
Score = 112 bits (280), Expect = 6e-23
Identities = 70/160 (43%), Positives = 95/160 (59%), Gaps = 31/160 (19%)
Frame = -2
Query: 412 AAPDIDGGDWRTQIRPDFRERIVNKIVETLKRHISSSGQAELLQELEEISVRFEEKIYME 233
AA ++ GDWRTQ+ PD R+RIVNKI+ETLKRH+ SGQ E +QEL++I+VRFEEKIY
Sbjct: 23 AAGAMESGDWRTQLMPDSRQRIVNKIMETLKRHLPVSGQ-EGVQELKKIAVRFEEKIYSA 81
Query: 232 AETQNDYLRKISLKMLT------------------------LGP-------QIQNRVQRL 146
A +Q DYLRKISLKMLT LGP Q+ ++ Q+L
Sbjct: 82 ATSQQDYLRKISLKMLTMETKSQPPMTNSVQPNPASSGQNALGPGSHSMQSQVNSQAQQL 141
Query: 145 PIPAVSDQSQVIGGDWRTQLQPDTRQRIVNRILETLMRHS 26
P+P V++Q+Q QP +Q + N + T +++S
Sbjct: 142 PVPMVANQTQT--------RQPLLQQNLQNNMASTGLQNS 173
Score = 57.8 bits (138), Expect = 2e-06
Identities = 25/32 (78%), Positives = 28/32 (87%)
Frame = -2
Query: 106 GDWRTQLQPDTRQRIVNRILETLMRHSPFSGQ 11
GDWRTQL PD+RQRIVN+I+ETL RH P SGQ
Sbjct: 30 GDWRTQLMPDSRQRIVNKIMETLKRHLPVSGQ 61
>ref|XP_006359328.1| PREDICTED: mediator of RNA polymerase II transcription subunit
15a-like isoform X3 [Solanum tuberosum]
Length = 1349
Score = 111 bits (278), Expect = 1e-22
Identities = 70/155 (45%), Positives = 90/155 (58%), Gaps = 31/155 (20%)
Frame = -2
Query: 412 AAPDIDGGDWRTQIRPDFRERIVNKIVETLKRHISSSGQAELLQELEEISVRFEEKIYME 233
AA +D GDWRTQ+ PD R+RIVNKI+ETLKRH+ SGQ E +QEL++I+VRFEEKIY
Sbjct: 21 AAGAMDSGDWRTQLLPDSRQRIVNKIMETLKRHLPVSGQ-EGVQELKKIAVRFEEKIYSA 79
Query: 232 AETQNDYLRKISLKMLT------------------------LGP-------QIQNRVQRL 146
A +Q DYLRKISLKMLT LGP Q+ + Q+L
Sbjct: 80 ATSQQDYLRKISLKMLTMETKSQTPMTNSVQPNPASSGQNALGPGSHGMQSQVNGQAQQL 139
Query: 145 PIPAVSDQSQVIGGDWRTQLQPDTRQRIVNRILET 41
P+P V++Q+Q QP +Q + N + T
Sbjct: 140 PVPMVANQTQT--------RQPLLQQNLQNNMAST 166
Score = 57.0 bits (136), Expect = 3e-06
Identities = 25/32 (78%), Positives = 28/32 (87%)
Frame = -2
Query: 106 GDWRTQLQPDTRQRIVNRILETLMRHSPFSGQ 11
GDWRTQL PD+RQRIVN+I+ETL RH P SGQ
Sbjct: 28 GDWRTQLLPDSRQRIVNKIMETLKRHLPVSGQ 59
>ref|XP_006359327.1| PREDICTED: mediator of RNA polymerase II transcription subunit
15a-like isoform X2 [Solanum tuberosum]
Length = 1352
Score = 111 bits (278), Expect = 1e-22
Identities = 70/155 (45%), Positives = 90/155 (58%), Gaps = 31/155 (20%)
Frame = -2
Query: 412 AAPDIDGGDWRTQIRPDFRERIVNKIVETLKRHISSSGQAELLQELEEISVRFEEKIYME 233
AA +D GDWRTQ+ PD R+RIVNKI+ETLKRH+ SGQ E +QEL++I+VRFEEKIY
Sbjct: 21 AAGAMDSGDWRTQLLPDSRQRIVNKIMETLKRHLPVSGQ-EGVQELKKIAVRFEEKIYSA 79
Query: 232 AETQNDYLRKISLKMLT------------------------LGP-------QIQNRVQRL 146
A +Q DYLRKISLKMLT LGP Q+ + Q+L
Sbjct: 80 ATSQQDYLRKISLKMLTMETKSQTPMTNSVQPNPASSGQNALGPGSHGMQSQVNGQAQQL 139
Query: 145 PIPAVSDQSQVIGGDWRTQLQPDTRQRIVNRILET 41
P+P V++Q+Q QP +Q + N + T
Sbjct: 140 PVPMVANQTQT--------RQPLLQQNLQNNMAST 166
Score = 57.0 bits (136), Expect = 3e-06
Identities = 25/32 (78%), Positives = 28/32 (87%)
Frame = -2
Query: 106 GDWRTQLQPDTRQRIVNRILETLMRHSPFSGQ 11
GDWRTQL PD+RQRIVN+I+ETL RH P SGQ
Sbjct: 28 GDWRTQLLPDSRQRIVNKIMETLKRHLPVSGQ 59
>ref|XP_006359326.1| PREDICTED: mediator of RNA polymerase II transcription subunit
15a-like isoform X1 [Solanum tuberosum]
Length = 1355
Score = 111 bits (278), Expect = 1e-22
Identities = 70/155 (45%), Positives = 90/155 (58%), Gaps = 31/155 (20%)
Frame = -2
Query: 412 AAPDIDGGDWRTQIRPDFRERIVNKIVETLKRHISSSGQAELLQELEEISVRFEEKIYME 233
AA +D GDWRTQ+ PD R+RIVNKI+ETLKRH+ SGQ E +QEL++I+VRFEEKIY
Sbjct: 21 AAGAMDSGDWRTQLLPDSRQRIVNKIMETLKRHLPVSGQ-EGVQELKKIAVRFEEKIYSA 79
Query: 232 AETQNDYLRKISLKMLT------------------------LGP-------QIQNRVQRL 146
A +Q DYLRKISLKMLT LGP Q+ + Q+L
Sbjct: 80 ATSQQDYLRKISLKMLTMETKSQTPMTNSVQPNPASSGQNALGPGSHGMQSQVNGQAQQL 139
Query: 145 PIPAVSDQSQVIGGDWRTQLQPDTRQRIVNRILET 41
P+P V++Q+Q QP +Q + N + T
Sbjct: 140 PVPMVANQTQT--------RQPLLQQNLQNNMAST 166
Score = 57.0 bits (136), Expect = 3e-06
Identities = 25/32 (78%), Positives = 28/32 (87%)
Frame = -2
Query: 106 GDWRTQLQPDTRQRIVNRILETLMRHSPFSGQ 11
GDWRTQL PD+RQRIVN+I+ETL RH P SGQ
Sbjct: 28 GDWRTQLLPDSRQRIVNKIMETLKRHLPVSGQ 59
>ref|XP_006389363.1| hypothetical protein POPTR_0027s00370g [Populus trichocarpa]
gi|550312134|gb|ERP48277.1| hypothetical protein
POPTR_0027s00370g [Populus trichocarpa]
Length = 1005
Score = 110 bits (275), Expect = 2e-22
Identities = 64/122 (52%), Positives = 78/122 (63%), Gaps = 25/122 (20%)
Frame = -2
Query: 406 PDIDGGDWRTQIRPDFRERIVNKIVETLKRHISSSGQAELLQELEEISVRFEEKIYMEAE 227
P +D GDWRTQ++PD R+RIVNKI+ETLKRH+ SGQ E LQEL++I+VRFEEKIY A
Sbjct: 15 PVMDTGDWRTQLQPDSRQRIVNKIMETLKRHLPFSGQ-EGLQELKKIAVRFEEKIYTAAT 73
Query: 226 TQNDYLRKISLKMLT-------------------------LGPQIQNRVQRLPIPAVSDQ 122
Q+DYLRKISLKMLT + PQ+ N+ Q LPI S+Q
Sbjct: 74 NQSDYLRKISLKMLTMETKSQNTIPTGNGNKPLDPGASHSMPPQVHNQGQSLPISLSSNQ 133
Query: 121 SQ 116
Q
Sbjct: 134 PQ 135
Score = 62.8 bits (151), Expect = 6e-08
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = -2
Query: 106 GDWRTQLQPDTRQRIVNRILETLMRHSPFSGQAQL 2
GDWRTQLQPD+RQRIVN+I+ETL RH PFSGQ L
Sbjct: 20 GDWRTQLQPDSRQRIVNKIMETLKRHLPFSGQEGL 54
>ref|XP_006385271.1| hypothetical protein POPTR_0003s02320g [Populus trichocarpa]
gi|550342211|gb|ERP63068.1| hypothetical protein
POPTR_0003s02320g [Populus trichocarpa]
Length = 1293
Score = 110 bits (274), Expect = 3e-22
Identities = 56/84 (66%), Positives = 69/84 (82%)
Frame = -2
Query: 406 PDIDGGDWRTQIRPDFRERIVNKIVETLKRHISSSGQAELLQELEEISVRFEEKIYMEAE 227
P +D GDWRTQ++PD R+RIVNKI+ETLKRH+ SGQ E LQEL++I+VRFEEKIY A
Sbjct: 15 PVMDTGDWRTQLQPDSRQRIVNKIMETLKRHLPFSGQ-EGLQELKKIAVRFEEKIYTAAT 73
Query: 226 TQNDYLRKISLKMLTLGPQIQNRV 155
Q+DYLRKISLKMLT+ + QN +
Sbjct: 74 NQSDYLRKISLKMLTMETKSQNTI 97
Score = 62.8 bits (151), Expect = 6e-08
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = -2
Query: 106 GDWRTQLQPDTRQRIVNRILETLMRHSPFSGQAQL 2
GDWRTQLQPD+RQRIVN+I+ETL RH PFSGQ L
Sbjct: 20 GDWRTQLQPDSRQRIVNKIMETLKRHLPFSGQEGL 54
>ref|XP_002303194.2| hypothetical protein POPTR_0003s01980g, partial [Populus
trichocarpa] gi|550342176|gb|EEE78173.2| hypothetical
protein POPTR_0003s01980g, partial [Populus trichocarpa]
Length = 145
Score = 109 bits (273), Expect = 4e-22
Identities = 56/82 (68%), Positives = 69/82 (84%)
Frame = -2
Query: 406 PDIDGGDWRTQIRPDFRERIVNKIVETLKRHISSSGQAELLQELEEISVRFEEKIYMEAE 227
P +D GDWRTQ++PD R+RIVNKI+ETLKRH+ SGQ E LQEL++I+VRFEEKIY A
Sbjct: 43 PVMDTGDWRTQLQPDSRQRIVNKIMETLKRHLPFSGQ-EGLQELKKIAVRFEEKIYTAAT 101
Query: 226 TQNDYLRKISLKMLTLGPQIQN 161
+Q+DYLRKISLKMLT+ + QN
Sbjct: 102 SQSDYLRKISLKMLTIETRSQN 123
Score = 62.8 bits (151), Expect = 6e-08
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = -2
Query: 106 GDWRTQLQPDTRQRIVNRILETLMRHSPFSGQAQL 2
GDWRTQLQPD+RQRIVN+I+ETL RH PFSGQ L
Sbjct: 48 GDWRTQLQPDSRQRIVNKIMETLKRHLPFSGQEGL 82
>ref|XP_006389371.1| hypothetical protein POPTR_0027s00430g [Populus trichocarpa]
gi|550312142|gb|ERP48285.1| hypothetical protein
POPTR_0027s00430g [Populus trichocarpa]
Length = 981
Score = 109 bits (273), Expect = 4e-22
Identities = 55/84 (65%), Positives = 69/84 (82%)
Frame = -2
Query: 406 PDIDGGDWRTQIRPDFRERIVNKIVETLKRHISSSGQAELLQELEEISVRFEEKIYMEAE 227
P +D GDWRTQ++PD R+RIVNKI+ETLKRH+ SGQ E LQEL++++VRFEEKIY A
Sbjct: 15 PVMDTGDWRTQLQPDSRQRIVNKIMETLKRHLPFSGQ-EGLQELKKVAVRFEEKIYTAAT 73
Query: 226 TQNDYLRKISLKMLTLGPQIQNRV 155
Q+DYLRKISLKMLT+ + QN +
Sbjct: 74 NQSDYLRKISLKMLTMETKSQNTI 97
Score = 62.8 bits (151), Expect = 6e-08
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = -2
Query: 106 GDWRTQLQPDTRQRIVNRILETLMRHSPFSGQAQL 2
GDWRTQLQPD+RQRIVN+I+ETL RH PFSGQ L
Sbjct: 20 GDWRTQLQPDSRQRIVNKIMETLKRHLPFSGQEGL 54
>ref|XP_006389370.1| hypothetical protein POPTR_0027s00430g [Populus trichocarpa]
gi|550312141|gb|ERP48284.1| hypothetical protein
POPTR_0027s00430g [Populus trichocarpa]
Length = 942
Score = 109 bits (273), Expect = 4e-22
Identities = 55/84 (65%), Positives = 69/84 (82%)
Frame = -2
Query: 406 PDIDGGDWRTQIRPDFRERIVNKIVETLKRHISSSGQAELLQELEEISVRFEEKIYMEAE 227
P +D GDWRTQ++PD R+RIVNKI+ETLKRH+ SGQ E LQEL++++VRFEEKIY A
Sbjct: 15 PVMDTGDWRTQLQPDSRQRIVNKIMETLKRHLPFSGQ-EGLQELKKVAVRFEEKIYTAAT 73
Query: 226 TQNDYLRKISLKMLTLGPQIQNRV 155
Q+DYLRKISLKMLT+ + QN +
Sbjct: 74 NQSDYLRKISLKMLTMETKSQNTI 97
Score = 62.8 bits (151), Expect = 6e-08
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = -2
Query: 106 GDWRTQLQPDTRQRIVNRILETLMRHSPFSGQAQL 2
GDWRTQLQPD+RQRIVN+I+ETL RH PFSGQ L
Sbjct: 20 GDWRTQLQPDSRQRIVNKIMETLKRHLPFSGQEGL 54
>ref|XP_006389369.1| hypothetical protein POPTR_0027s00430g [Populus trichocarpa]
gi|550312140|gb|ERP48283.1| hypothetical protein
POPTR_0027s00430g [Populus trichocarpa]
Length = 874
Score = 109 bits (273), Expect = 4e-22
Identities = 55/84 (65%), Positives = 69/84 (82%)
Frame = -2
Query: 406 PDIDGGDWRTQIRPDFRERIVNKIVETLKRHISSSGQAELLQELEEISVRFEEKIYMEAE 227
P +D GDWRTQ++PD R+RIVNKI+ETLKRH+ SGQ E LQEL++++VRFEEKIY A
Sbjct: 15 PVMDTGDWRTQLQPDSRQRIVNKIMETLKRHLPFSGQ-EGLQELKKVAVRFEEKIYTAAT 73
Query: 226 TQNDYLRKISLKMLTLGPQIQNRV 155
Q+DYLRKISLKMLT+ + QN +
Sbjct: 74 NQSDYLRKISLKMLTMETKSQNTI 97
Score = 62.8 bits (151), Expect = 6e-08
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = -2
Query: 106 GDWRTQLQPDTRQRIVNRILETLMRHSPFSGQAQL 2
GDWRTQLQPD+RQRIVN+I+ETL RH PFSGQ L
Sbjct: 20 GDWRTQLQPDSRQRIVNKIMETLKRHLPFSGQEGL 54
>gb|ABK95291.1| unknown [Populus trichocarpa]
Length = 101
Score = 108 bits (269), Expect = 1e-21
Identities = 55/80 (68%), Positives = 68/80 (85%)
Frame = -2
Query: 400 IDGGDWRTQIRPDFRERIVNKIVETLKRHISSSGQAELLQELEEISVRFEEKIYMEAETQ 221
+D GDWRTQ++PD R+RIVNKI+ETLKRH+ SGQ E LQEL++I+VRFEEKIY A +Q
Sbjct: 1 MDTGDWRTQLQPDSRQRIVNKIMETLKRHLPFSGQ-EGLQELKKIAVRFEEKIYTAATSQ 59
Query: 220 NDYLRKISLKMLTLGPQIQN 161
+DYLRKISLKMLT+ + QN
Sbjct: 60 SDYLRKISLKMLTIETRSQN 79
Score = 62.8 bits (151), Expect = 6e-08
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = -2
Query: 106 GDWRTQLQPDTRQRIVNRILETLMRHSPFSGQAQL 2
GDWRTQLQPD+RQRIVN+I+ETL RH PFSGQ L
Sbjct: 4 GDWRTQLQPDSRQRIVNKIMETLKRHLPFSGQEGL 38
>ref|XP_002530460.1| transcription cofactor, putative [Ricinus communis]
gi|223530005|gb|EEF31930.1| transcription cofactor,
putative [Ricinus communis]
Length = 1382
Score = 107 bits (268), Expect = 2e-21
Identities = 73/174 (41%), Positives = 95/174 (54%), Gaps = 40/174 (22%)
Frame = -2
Query: 406 PDIDGGDWRTQIRPDFRERIVNKIVETLKRHISSSGQAELLQELEEISVRFEEKIYMEAE 227
P +D GDWR ++PD R+RIVNKI+ETLKRH+ SGQ E L+EL++I+VRFEEKIY A
Sbjct: 15 PAVDTGDWRATLQPDSRQRIVNKIMETLKRHLPFSGQ-EGLEELKKIAVRFEEKIYTAAT 73
Query: 226 TQNDYLRKISLKMLT--------------------------------LGPQIQNRVQRLP 143
+Q+DYLRKISLKMLT + PQ+ N+ Q LP
Sbjct: 74 SQSDYLRKISLKMLTMESKSQNNVPNSVPPNPFGNNNRPPDPGASQSMQPQVHNQGQSLP 133
Query: 142 IPAVSDQSQVIGGDWRTQLQPDTRQRIVNRILETLMRHS--------PFSGQAQ 5
+P ++Q+Q R QL Q I N + T ++ S P SG AQ
Sbjct: 134 VPLSANQTQT-----RQQL---LSQNIQNNMASTGIQSSAGLTSALPPVSGLAQ 179
>ref|XP_002298205.2| hypothetical protein POPTR_0001s21210g [Populus trichocarpa]
gi|550347800|gb|EEE83010.2| hypothetical protein
POPTR_0001s21210g [Populus trichocarpa]
Length = 540
Score = 106 bits (264), Expect = 5e-21
Identities = 54/84 (64%), Positives = 69/84 (82%)
Frame = -2
Query: 406 PDIDGGDWRTQIRPDFRERIVNKIVETLKRHISSSGQAELLQELEEISVRFEEKIYMEAE 227
P +D GDWRTQ++PD R+RIVNKI+ETLKRH+ SGQ E LQEL++I+VRFEEKIY A
Sbjct: 15 PVMDTGDWRTQLQPDARQRIVNKIMETLKRHLPFSGQ-EGLQELKKIAVRFEEKIYTAAT 73
Query: 226 TQNDYLRKISLKMLTLGPQIQNRV 155
+Q+DYLRKISLKML + + Q+ +
Sbjct: 74 SQSDYLRKISLKMLAMENKSQSTI 97
Score = 62.4 bits (150), Expect = 8e-08
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = -2
Query: 106 GDWRTQLQPDTRQRIVNRILETLMRHSPFSGQAQL 2
GDWRTQLQPD RQRIVN+I+ETL RH PFSGQ L
Sbjct: 20 GDWRTQLQPDARQRIVNKIMETLKRHLPFSGQEGL 54