BLASTX nr result
ID: Rehmannia25_contig00001581
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00001581
(1070 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004245997.1| PREDICTED: DNA-directed RNA polymerase III s... 284 4e-74
ref|XP_006366884.1| PREDICTED: DNA-directed RNA polymerase III s... 281 4e-73
emb|CBI33284.3| unnamed protein product [Vitis vinifera] 277 6e-72
ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III s... 273 1e-70
ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III s... 272 1e-70
ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Popu... 269 1e-69
ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III s... 266 8e-69
ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, p... 266 8e-69
ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III s... 266 1e-68
ref|XP_002324707.1| hypothetical protein POPTR_0018s04220g [Popu... 265 2e-68
gb|EMJ10006.1| hypothetical protein PRUPE_ppa024742mg [Prunus pe... 265 3e-68
gb|ESW11339.1| hypothetical protein PHAVU_008G021700g [Phaseolus... 262 2e-67
emb|CBI36309.3| unnamed protein product [Vitis vinifera] 259 2e-66
ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III s... 258 4e-66
ref|XP_006427248.1| hypothetical protein CICLE_v10026399mg [Citr... 256 8e-66
ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III s... 255 2e-65
ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III s... 255 2e-65
gb|EOY25790.1| DNA-directed RNA polymerase III subunit rpc6, put... 252 2e-64
gb|EXB67305.1| DNA-directed RNA polymerase III subunit RPC6 [Mor... 251 5e-64
dbj|BAJ53222.1| JHL06P13.1 [Jatropha curcas] 251 5e-64
>ref|XP_004245997.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like isoform
1 [Solanum lycopersicum] gi|460400960|ref|XP_004245998.1|
PREDICTED: DNA-directed RNA polymerase III subunit
rpc6-like isoform 2 [Solanum lycopersicum]
Length = 237
Score = 284 bits (727), Expect = 4e-74
Identities = 141/241 (58%), Positives = 186/241 (77%), Gaps = 1/241 (0%)
Frame = +1
Query: 325 MSRSLVSPSSLKRKRPETQLPGLVDAEHAILNLIKSKKDLGIWTREIKLETKLADNVVTK 504
MSRS + ++LKRKRP++ GLVDAE +LN++KSKK+ G+W ++K E +A +V K
Sbjct: 1 MSRSSEA-AALKRKRPDSSTQGLVDAELVVLNVVKSKKNQGVWVADVKKEANIAPALVDK 59
Query: 505 SVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCF 684
+ SL+ K LIK+V +IQNKAKK YMAVE+EPS+E++GG WY+ G+LDK+ I L+ C
Sbjct: 60 CLTSLVKKNLIKKVPSIQNKAKKYYMAVEYEPSEELTGGAWYSEGKLDKEFITVLRETCL 119
Query: 685 RYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSI 864
+ + M KVAT+EG+H+ +KK VV +SQQ+GEILNSMVLD+ IIEVKSTGLG+Y+SI
Sbjct: 120 KVIGMMKVATVEGIHDFLKKRKVVEC-CTSQQVGEILNSMVLDDSIIEVKSTGLGEYHSI 178
Query: 865 PIGKTCYRVAGGAGVAKGPR-MGAFATIPCGACPRISLCTSDGVISPSTCVYYTKWLGID 1041
PIG CYR+A GV GP+ +G A+IPCGACPRIS+CT DG+ISP TCVY+TKWL I+
Sbjct: 179 PIGSVCYRIA--VGVTSGPKTIGPMASIPCGACPRISVCTPDGIISPKTCVYFTKWLDIE 236
Query: 1042 F 1044
F
Sbjct: 237 F 237
>ref|XP_006366884.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Solanum
tuberosum]
Length = 237
Score = 281 bits (718), Expect = 4e-73
Identities = 140/241 (58%), Positives = 184/241 (76%), Gaps = 1/241 (0%)
Frame = +1
Query: 325 MSRSLVSPSSLKRKRPETQLPGLVDAEHAILNLIKSKKDLGIWTREIKLETKLADNVVTK 504
MSRS + +++KRKR ++ GLVDAE +LN++KSKK+LG+W ++K E +A +V K
Sbjct: 1 MSRSSEA-AAMKRKRLDSSTQGLVDAEFVVLNVVKSKKNLGVWVADVKKEANIAPALVDK 59
Query: 505 SVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCF 684
+ SL+ K LIK+V IQNKAKK YMAVE+EPS+E++GG WY+ G+LDK+ I L+ C
Sbjct: 60 CLTSLVKKNLIKKVPTIQNKAKKHYMAVEYEPSEELTGGAWYSEGKLDKEFITVLRETCL 119
Query: 685 RYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSI 864
+ + M KVAT+EG+H+ +KK VV +SQQ+GEILNSMVLD+ IIEVKSTGLG+Y+SI
Sbjct: 120 KVIGMMKVATVEGIHDFLKKRKVVEC-CTSQQVGEILNSMVLDDAIIEVKSTGLGEYHSI 178
Query: 865 PIGKTCYRVAGGAGVAKGPR-MGAFATIPCGACPRISLCTSDGVISPSTCVYYTKWLGID 1041
PIG CYR+A G GP+ +G A+IPCGACPRIS+CT DG+ISP TCVYYTKWL I+
Sbjct: 179 PIGSACYRIA--VGDTSGPKTIGPMASIPCGACPRISVCTPDGIISPKTCVYYTKWLNIE 236
Query: 1042 F 1044
F
Sbjct: 237 F 237
>emb|CBI33284.3| unnamed protein product [Vitis vinifera]
Length = 300
Score = 277 bits (708), Expect = 6e-72
Identities = 140/241 (58%), Positives = 174/241 (72%), Gaps = 3/241 (1%)
Frame = +1
Query: 319 EGMSRSLVSPSSLKRKRPETQLPG--LVDAEHAILNLIKSKKDLGIWTREIKLETKLADN 492
EGMSRS SSLKRKRP+T L+DAE + +LI+SK+D+GIWTR++K ET L DN
Sbjct: 60 EGMSRS--QGSSLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDN 117
Query: 493 VVTKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALK 672
VVTKS+K+L K LIKEVVNIQ+K +K YMAVEFEPSKE++GG WY G LD + I LK
Sbjct: 118 VVTKSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILK 177
Query: 673 LVCFRYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGD 852
C R + KVAT EG+ I K G+ + S+QQI EIL ++VLDN+I+EV+S+G G+
Sbjct: 178 KTCVRVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGE 237
Query: 853 YYSIPIGKTCYRVAGGAGV-AKGPRMGAFATIPCGACPRISLCTSDGVISPSTCVYYTKW 1029
+ SIPIG CYR G+ GP +GA A+IPCG CPRI+ CT DG+ISP TC YYTKW
Sbjct: 238 FSSIPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKW 297
Query: 1030 L 1032
L
Sbjct: 298 L 298
>ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 273 bits (697), Expect = 1e-70
Identities = 138/239 (57%), Positives = 172/239 (71%), Gaps = 3/239 (1%)
Frame = +1
Query: 325 MSRSLVSPSSLKRKRPETQLPG--LVDAEHAILNLIKSKKDLGIWTREIKLETKLADNVV 498
MSRS SSLKRKRP+T L+DAE + +LI+SK+D+GIWTR++K ET L DNVV
Sbjct: 1 MSRS--QGSSLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVV 58
Query: 499 TKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLV 678
TKS+K+L K LIKEVVNIQ+K +K YMAVEFEPSKE++GG WY G LD + I LK
Sbjct: 59 TKSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKT 118
Query: 679 CFRYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYY 858
C R + KVAT EG+ I K G+ + S+QQI EIL ++VLDN+I+EV+S+G G++
Sbjct: 119 CVRVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFS 178
Query: 859 SIPIGKTCYRVAGGAGV-AKGPRMGAFATIPCGACPRISLCTSDGVISPSTCVYYTKWL 1032
SIPIG CYR G+ GP +GA A+IPCG CPRI+ CT DG+ISP TC YYTKWL
Sbjct: 179 SIPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWL 237
>ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 272 bits (696), Expect = 1e-70
Identities = 138/239 (57%), Positives = 172/239 (71%), Gaps = 3/239 (1%)
Frame = +1
Query: 325 MSRSLVSPSSLKRKRPETQLPG--LVDAEHAILNLIKSKKDLGIWTREIKLETKLADNVV 498
MSRS SSLKRKRP+T L+DAE + +LI+SK+D+GIWTR++K ET L DNVV
Sbjct: 1 MSRS--QGSSLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVV 58
Query: 499 TKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLV 678
TKS+K+L K LIKEVVNIQ+K +K YMAVEFEPSKE++GG WY G LD + I LK
Sbjct: 59 TKSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKET 118
Query: 679 CFRYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYY 858
C R + KVAT EG+ I K G+ + S+QQI EIL ++VLDN+I+EV+S+G G++
Sbjct: 119 CVRVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFS 178
Query: 859 SIPIGKTCYRVAGGAGV-AKGPRMGAFATIPCGACPRISLCTSDGVISPSTCVYYTKWL 1032
SIPIG CYR G+ GP +GA A+IPCG CPRI+ CT DG+ISP TC YYTKWL
Sbjct: 179 SIPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWL 237
>ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Populus trichocarpa]
gi|550346475|gb|EEE82426.2| hypothetical protein
POPTR_0001s04090g [Populus trichocarpa]
Length = 291
Score = 269 bits (688), Expect = 1e-69
Identities = 140/258 (54%), Positives = 176/258 (68%), Gaps = 2/258 (0%)
Frame = +1
Query: 265 RTHAILSGEFFRPFAVEIEGMSRSLVSPSSLKRKRPETQLP--GLVDAEHAILNLIKSKK 438
R A +G FR F V GMSR + PSSLKRKRPE P L + E + ++I+SK+
Sbjct: 34 RVPAYCTGCLFR-FDVLSVGMSR-VQGPSSLKRKRPELNSPVQSLTEHERILYDVIRSKQ 91
Query: 439 DLGIWTREIKLETKLADNVVTKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISG 618
D+GIWTR++K E KL DNVV KS+K+L K LIKEVVNIQNK +K +MA EFEPSKEISG
Sbjct: 92 DIGIWTRDMKKEAKLPDNVVNKSLKALRVKNLIKEVVNIQNKGRKHFMATEFEPSKEISG 151
Query: 619 GEWYNNGELDKQLIDALKLVCFRYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILN 798
G WY G LD + I++L+ +C R + + VATLE V + I D++ QQI EIL
Sbjct: 152 GAWYLEGSLDTEFIESLRQLCKRQIEKKGVATLEEVTDSINSYPAFNVDVTKQQIEEILR 211
Query: 799 SMVLDNDIIEVKSTGLGDYYSIPIGKTCYRVAGGAGVAKGPRMGAFATIPCGACPRISLC 978
+++LDN I+EVKS G+G++ SIP GK CYR + P+ GA A+IPCG CPRIS C
Sbjct: 212 TLILDNAIMEVKSNGMGEFASIPFGKVCYRYISKGALGGEPKAGALASIPCGVCPRISHC 271
Query: 979 TSDGVISPSTCVYYTKWL 1032
T DG+ISP TCVYY KWL
Sbjct: 272 TPDGIISPKTCVYYQKWL 289
>ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 266 bits (681), Expect = 8e-69
Identities = 134/239 (56%), Positives = 171/239 (71%), Gaps = 3/239 (1%)
Frame = +1
Query: 325 MSRSLVSPSSLKRKRPETQLPG--LVDAEHAILNLIKSKKDLGIWTREIKLETKLADNVV 498
MSRS SLKRKRP+T L+DAE + +LI+SK+D+GIWTR++K ET L DNVV
Sbjct: 1 MSRS--QGLSLKRKRPDTNAASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVV 58
Query: 499 TKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLV 678
TKS+K+L K LIKEVVNIQ+K +K YMAVEFEPSKE++GG WY G LD + I LK
Sbjct: 59 TKSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKET 118
Query: 679 CFRYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYY 858
C + + KVAT EG+ I K G+ + S+QQI EIL ++VLDN+I+EV+S+G G++
Sbjct: 119 CVKVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFS 178
Query: 859 SIPIGKTCYRVAGGAGV-AKGPRMGAFATIPCGACPRISLCTSDGVISPSTCVYYTKWL 1032
SIPIG CYR G+ GP++GA A+IPCG CPRI+ CT DG+ISP +C YY KWL
Sbjct: 179 SIPIGAVCYRCTNKGGLGGGGPKIGAMASIPCGVCPRITQCTPDGIISPKSCAYYAKWL 237
>ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, putative [Ricinus
communis] gi|223549406|gb|EEF50894.1| DNA-directed RNA
polymerase III subunit F, putative [Ricinus communis]
Length = 236
Score = 266 bits (681), Expect = 8e-69
Identities = 131/229 (57%), Positives = 167/229 (72%), Gaps = 2/229 (0%)
Frame = +1
Query: 352 SLKRKRPETQLPG--LVDAEHAILNLIKSKKDLGIWTREIKLETKLADNVVTKSVKSLLA 525
+LKRK+PE+ P L + E + N+I SK+D+GIWTR++K ET L DNVV KS+K L A
Sbjct: 6 ALKRKQPESSSPAQSLTEHECTLYNVIWSKQDMGIWTRDMKRETNLPDNVVNKSLKVLQA 65
Query: 526 KGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCFRYMRMQK 705
K LIKEVVNIQNK +K YMA EFEPSKEI+GG WY G LD + I LK VC + + K
Sbjct: 66 KNLIKEVVNIQNKGRKHYMATEFEPSKEITGGAWYVEGNLDTEFIKLLKEVCTKQVLKLK 125
Query: 706 VATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSIPIGKTCY 885
VATLEG+ + IK++G+ +++ QQI EI+ ++VLDN +IEVKS G+ ++ IPIGK CY
Sbjct: 126 VATLEGITDSIKRSGIFNTELTKQQIEEIVKALVLDNALIEVKSNGMLEFSFIPIGKVCY 185
Query: 886 RVAGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISPSTCVYYTKWL 1032
+ G A PR+GA A+IPCG CPRIS CT DG+ISP TCVYY+KWL
Sbjct: 186 KCVGKGSTAGEPRIGAMASIPCGVCPRISQCTPDGIISPQTCVYYSKWL 234
>ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Glycine
max]
Length = 239
Score = 266 bits (680), Expect = 1e-68
Identities = 131/234 (55%), Positives = 166/234 (70%), Gaps = 2/234 (0%)
Frame = +1
Query: 337 LVSPSSLKRKRPETQLP--GLVDAEHAILNLIKSKKDLGIWTREIKLETKLADNVVTKSV 510
L SSLKRKR + L L D E + NLI SKKD+GIWT ++K ET L D++V KS+
Sbjct: 4 LQGSSSLKRKRQDLALVTGSLTDGERVLYNLIHSKKDMGIWTGDMKRETNLPDSIVKKSL 63
Query: 511 KSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCFRY 690
K L +K LIKEVVNIQNK +K YMA EFEPSKEI+GG WYN G LD I+ +K VC +Y
Sbjct: 64 KLLQSKNLIKEVVNIQNKGRKHYMAAEFEPSKEITGGVWYNQGRLDTDFINLVKDVCLKY 123
Query: 691 MRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSIPI 870
+ QKVAT +GV +K+GV ++++QQI EIL ++VLD++I+EVKSTG GD+ S+P+
Sbjct: 124 IFRQKVATRDGVMEWSRKSGVFNVEVTTQQIDEILRTLVLDDEIVEVKSTGFGDFSSVPV 183
Query: 871 GKTCYRVAGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISPSTCVYYTKWL 1032
G+ CYR G + GA A+IPCG CPRI+ CT DG+ISP TCVYY KWL
Sbjct: 184 GRICYRCKSKGGNRGEQKPGAMASIPCGVCPRINFCTPDGIISPRTCVYYQKWL 237
>ref|XP_002324707.1| hypothetical protein POPTR_0018s04220g [Populus trichocarpa]
gi|222866141|gb|EEF03272.1| hypothetical protein
POPTR_0018s04220g [Populus trichocarpa]
Length = 239
Score = 265 bits (678), Expect = 2e-68
Identities = 133/238 (55%), Positives = 168/238 (70%), Gaps = 2/238 (0%)
Frame = +1
Query: 325 MSRSLVSPSSLKRKRPETQLPG--LVDAEHAILNLIKSKKDLGIWTREIKLETKLADNVV 498
MSR L PSSLKRKRPE P L + E + ++I+SK+D+GIWTR++K E KL DNVV
Sbjct: 1 MSR-LQGPSSLKRKRPEVNSPAQSLTEHERLLYDVIRSKQDIGIWTRDMKKEAKLPDNVV 59
Query: 499 TKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLV 678
KS+K+L K LIKEVVNIQNK +K +MA EFEPSKEISGG WY G LD + I++LK +
Sbjct: 60 NKSLKALQVKKLIKEVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIESLKQL 119
Query: 679 CFRYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYY 858
C R + + VATLE V + I D++ QQI EIL +++LDN I+EVKS G+G++
Sbjct: 120 CKRQIERRGVATLEEVTDSINSYPAFNVDVTKQQIEEILRTLILDNVIMEVKSNGMGEFA 179
Query: 859 SIPIGKTCYRVAGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISPSTCVYYTKWL 1032
SIP G+ CY+ G+ P+ GA A+IPCG CPRIS CT DG+ISP TCVYY KWL
Sbjct: 180 SIPFGEVCYKYISKVGLGGEPKAGALASIPCGVCPRISQCTPDGIISPKTCVYYQKWL 237
>gb|EMJ10006.1| hypothetical protein PRUPE_ppa024742mg [Prunus persica]
Length = 236
Score = 265 bits (676), Expect = 3e-68
Identities = 125/231 (54%), Positives = 169/231 (73%), Gaps = 2/231 (0%)
Frame = +1
Query: 346 PSSLKRKRPETQLPG--LVDAEHAILNLIKSKKDLGIWTREIKLETKLADNVVTKSVKSL 519
PS+LKRK+P++ P L + E + ++I+SK+D+GIWTR++K E L DN+V KS+KSL
Sbjct: 4 PSALKRKQPDSSSPSESLTEHEKIVYSVIRSKQDMGIWTRDMKKEANLPDNLVGKSIKSL 63
Query: 520 LAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCFRYMRM 699
AK LIKEVVN+Q+K +K YMA EFEPSKE++GG+WY+NG LDK I +K + +
Sbjct: 64 QAKNLIKEVVNVQSKGRKHYMAAEFEPSKELTGGDWYSNGTLDKYYISCVKDGFAKIIYQ 123
Query: 700 QKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSIPIGKT 879
KVATLEG+ +E+KK+G+ + QQI EIL +VLD + EVKSTG+G++ S P+GK
Sbjct: 124 LKVATLEGISDEVKKSGIFKTSFTKQQIEEILRVLVLDKRVTEVKSTGMGEFGSFPVGKV 183
Query: 880 CYRVAGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISPSTCVYYTKWL 1032
CY+ G + P++GA A+IPCG CPRIS CT DG+ISP TCVY+TKWL
Sbjct: 184 CYKSTSKGGSKREPKVGAMASIPCGVCPRISQCTPDGIISPRTCVYFTKWL 234
>gb|ESW11339.1| hypothetical protein PHAVU_008G021700g [Phaseolus vulgaris]
Length = 239
Score = 262 bits (669), Expect = 2e-67
Identities = 130/234 (55%), Positives = 166/234 (70%), Gaps = 2/234 (0%)
Frame = +1
Query: 337 LVSPSSLKRKRPETQLPG--LVDAEHAILNLIKSKKDLGIWTREIKLETKLADNVVTKSV 510
L SSLKRKR + L + D E + NLI SKKD+GIWT ++K ET L D++V KS+
Sbjct: 4 LQESSSLKRKRQDLALVSGSMTDGERVLYNLIHSKKDMGIWTGDMKRETNLPDSIVKKSL 63
Query: 511 KSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCFRY 690
K L +K LIKEVVNIQNK +K YMA EFEPSKEI+GG+WY G LD I+ +K VC +
Sbjct: 64 KLLQSKNLIKEVVNIQNKGRKHYMAAEFEPSKEITGGDWYTQGSLDTDFINLVKEVCLKC 123
Query: 691 MRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSIPI 870
+ QKVAT +GV +K+GV T ++++QQI EIL ++VLD++I EVKSTGLGD+ S+P+
Sbjct: 124 IFRQKVATHDGVLEWSRKSGVFTVEVTAQQIDEILRALVLDDEIEEVKSTGLGDFSSVPV 183
Query: 871 GKTCYRVAGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISPSTCVYYTKWL 1032
G+ CYR G + GA A+IPCG CPRI+ CT DG+ISP TCVYY KWL
Sbjct: 184 GRICYRCKSKGGNRGEQKPGAMASIPCGVCPRINFCTPDGIISPRTCVYYQKWL 237
>emb|CBI36309.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 259 bits (661), Expect = 2e-66
Identities = 133/243 (54%), Positives = 172/243 (70%), Gaps = 3/243 (1%)
Frame = +1
Query: 301 PFAVEIEGMSRSLVSPSSLKRKRPETQLPG--LVDAEHAILNLIKSKKDLGIWTREIKLE 474
P + I GMSRS SLKRKRP+T L+DAE + +LI+SK+D+GIWTR++K E
Sbjct: 83 PQVILILGMSRS--QGLSLKRKRPDTNAASQPLLDAERVLYDLIRSKEDMGIWTRDMKRE 140
Query: 475 TKLADNVVTKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQ 654
T L DNVVTKS+K+L K LIKEVVNIQ+K +K YMAVEFEPSKE++GG WY G LD +
Sbjct: 141 TNLPDNVVTKSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTE 200
Query: 655 LIDALKLVCFRYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVK 834
I LK C + + KVAT EG+ I K G+ + S+QQI EIL ++VLDN+I+EV+
Sbjct: 201 YIKILKETCVKVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVR 260
Query: 835 STGLGDYYSIPIGKTCYRVAGGAGV-AKGPRMGAFATIPCGACPRISLCTSDGVISPSTC 1011
S+G G++ SIPIG CYR G+ GP++GA A+IPCG CPRI+ CT DG+ISP +
Sbjct: 261 SSGSGEFSSIPIGAVCYRCTNKGGLGGGGPKIGAMASIPCGVCPRITQCTPDGIISPKSS 320
Query: 1012 VYY 1020
V+Y
Sbjct: 321 VHY 323
>ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Citrus
sinensis]
Length = 233
Score = 258 bits (658), Expect = 4e-66
Identities = 126/229 (55%), Positives = 164/229 (71%), Gaps = 4/229 (1%)
Frame = +1
Query: 358 KRKRPETQLPG--LVDAEHAILNLIKSKKDLGIWTREIKLETK--LADNVVTKSVKSLLA 525
KRKRPE+ P L D E I ++I+SK+D+GIWTR++K E + L DN+VTKS+KSL
Sbjct: 3 KRKRPESNAPSDSLTDHERLIYDVIRSKQDMGIWTRDMKRELRVNLPDNIVTKSIKSLQN 62
Query: 526 KGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCFRYMRMQK 705
K LIKEVVNI +K KK MAVEFEPSKEISGG WY+ G LD + I +K C + + K
Sbjct: 63 KSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKLK 122
Query: 706 VATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSIPIGKTCY 885
VATLEG+ + IK++G D++ QQI EI+ ++VLDN I+EVKS G G++ +IP+GK CY
Sbjct: 123 VATLEGISDSIKRSGAFKVDLTKQQIEEIVRALVLDNQIMEVKSNGSGEFTNIPVGKVCY 182
Query: 886 RVAGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISPSTCVYYTKWL 1032
+ G P+ G+ A+IPCG CP+I++CT DGVISP TCVYYT WL
Sbjct: 183 KNVSKGGGGGEPKTGSLASIPCGVCPQINICTPDGVISPKTCVYYTTWL 231
>ref|XP_006427248.1| hypothetical protein CICLE_v10026399mg [Citrus clementina]
gi|557529238|gb|ESR40488.1| hypothetical protein
CICLE_v10026399mg [Citrus clementina]
Length = 233
Score = 256 bits (655), Expect = 8e-66
Identities = 125/229 (54%), Positives = 164/229 (71%), Gaps = 4/229 (1%)
Frame = +1
Query: 358 KRKRPETQLPG--LVDAEHAILNLIKSKKDLGIWTREIKLETK--LADNVVTKSVKSLLA 525
KRKRP++ P L D E I ++I+SK+D+GIWTR++K E + L DN+VTKS+KSL
Sbjct: 3 KRKRPDSNAPSDSLTDHERLIYDVIRSKQDMGIWTRDMKRELRVNLPDNIVTKSIKSLQN 62
Query: 526 KGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCFRYMRMQK 705
K LIKEVVNI +K KK MAVEFEPSKEISGG WY+ G LD + I +K C + + K
Sbjct: 63 KSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKLK 122
Query: 706 VATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSIPIGKTCY 885
VATLEG+ + IK++G D++ QQI EI+ ++VLDN I+EVKS G G++ +IP+GK CY
Sbjct: 123 VATLEGISDSIKRSGAFKVDLTKQQIEEIVRALVLDNQIMEVKSNGSGEFTNIPVGKVCY 182
Query: 886 RVAGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISPSTCVYYTKWL 1032
+ G P+ G+ A+IPCG CP+I++C DGVISP TCVYYTKWL
Sbjct: 183 KNVSKGGGGGEPKTGSLASIPCGVCPQINICKPDGVISPKTCVYYTKWL 231
>ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like isoform
X2 [Citrus sinensis]
Length = 234
Score = 255 bits (651), Expect = 2e-65
Identities = 127/230 (55%), Positives = 164/230 (71%), Gaps = 5/230 (2%)
Frame = +1
Query: 358 KRKRPETQLPG--LVDAEHAILNLIKS-KKDLGIWTREIKLETK--LADNVVTKSVKSLL 522
KRKRP++ P L D E I ++I+S K+D+GIWTR++K E K L DN+VTKS+KSL
Sbjct: 3 KRKRPDSNAPSDSLTDHERLIYDVIRSNKQDMGIWTRDMKRELKVNLPDNIVTKSIKSLQ 62
Query: 523 AKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCFRYMRMQ 702
K LIKEVVNI NK KK MAVEFEPSKEISGG WY+ G LD + I +K C + +
Sbjct: 63 NKSLIKEVVNIHNKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKL 122
Query: 703 KVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSIPIGKTC 882
KVATLEG+ + IK++G D++ QQI EI+ ++VLDN I+EVKS G G++ +IP+GK C
Sbjct: 123 KVATLEGISDSIKRSGAFKVDLTKQQIEEIVRAVVLDNQIMEVKSNGSGEFTNIPVGKVC 182
Query: 883 YRVAGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISPSTCVYYTKWL 1032
Y+ G P+ G+ A++PCG CP+I+ CT DGVISP TCVYYTKWL
Sbjct: 183 YKNVSKGGGGGEPKTGSSASVPCGVCPQINFCTPDGVISPKTCVYYTKWL 232
>ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like isoform
X1 [Citrus sinensis]
Length = 252
Score = 255 bits (651), Expect = 2e-65
Identities = 127/230 (55%), Positives = 164/230 (71%), Gaps = 5/230 (2%)
Frame = +1
Query: 358 KRKRPETQLPG--LVDAEHAILNLIKS-KKDLGIWTREIKLETK--LADNVVTKSVKSLL 522
KRKRP++ P L D E I ++I+S K+D+GIWTR++K E K L DN+VTKS+KSL
Sbjct: 21 KRKRPDSNAPSDSLTDHERLIYDVIRSNKQDMGIWTRDMKRELKVNLPDNIVTKSIKSLQ 80
Query: 523 AKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCFRYMRMQ 702
K LIKEVVNI NK KK MAVEFEPSKEISGG WY+ G LD + I +K C + +
Sbjct: 81 NKSLIKEVVNIHNKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKL 140
Query: 703 KVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSIPIGKTC 882
KVATLEG+ + IK++G D++ QQI EI+ ++VLDN I+EVKS G G++ +IP+GK C
Sbjct: 141 KVATLEGISDSIKRSGAFKVDLTKQQIEEIVRAVVLDNQIMEVKSNGSGEFTNIPVGKVC 200
Query: 883 YRVAGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISPSTCVYYTKWL 1032
Y+ G P+ G+ A++PCG CP+I+ CT DGVISP TCVYYTKWL
Sbjct: 201 YKNVSKGGGGGEPKTGSSASVPCGVCPQINFCTPDGVISPKTCVYYTKWL 250
>gb|EOY25790.1| DNA-directed RNA polymerase III subunit rpc6, putative isoform 1
[Theobroma cacao] gi|508778535|gb|EOY25791.1|
DNA-directed RNA polymerase III subunit rpc6, putative
isoform 1 [Theobroma cacao]
Length = 237
Score = 252 bits (644), Expect = 2e-64
Identities = 124/236 (52%), Positives = 168/236 (71%)
Frame = +1
Query: 325 MSRSLVSPSSLKRKRPETQLPGLVDAEHAILNLIKSKKDLGIWTREIKLETKLADNVVTK 504
MSR L P++LKRKRP L + E + ++I+ K+D+GI R++K E L DN+VTK
Sbjct: 1 MSR-LQGPNALKRKRPGATSDSLTEHERIVHDVIQGKQDMGISQRDMKREINLPDNLVTK 59
Query: 505 SVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCF 684
+KSLLAK LIKEV NIQN+ +K +++ EFEPS EI+GG WY G LD + I+ LK C+
Sbjct: 60 CLKSLLAKNLIKEVKNIQNRGRKHFISAEFEPSNEITGGAWYVEGSLDTEYINVLKEQCW 119
Query: 685 RYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSI 864
R + KVATLEGV + IK++ V ++S QQI EI+ ++VLDN+++EVKS+G G++ SI
Sbjct: 120 RKIYGLKVATLEGVTDAIKRSNVSQIELSKQQIEEIVKALVLDNEVMEVKSSGTGEFASI 179
Query: 865 PIGKTCYRVAGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISPSTCVYYTKWL 1032
P+GK CY+ G G P++G A+IPCG CP+IS CT DG+ISP TCVYY KWL
Sbjct: 180 PVGKVCYKCIGKRGYGGEPKVGTMASIPCGVCPQISHCTPDGIISPKTCVYYKKWL 235
>gb|EXB67305.1| DNA-directed RNA polymerase III subunit RPC6 [Morus notabilis]
Length = 238
Score = 251 bits (640), Expect = 5e-64
Identities = 120/238 (50%), Positives = 177/238 (74%), Gaps = 2/238 (0%)
Frame = +1
Query: 325 MSRSLVSPSSLKRKRPETQLP--GLVDAEHAILNLIKSKKDLGIWTREIKLETKLADNVV 498
MSR L PSSLKRK+P+++ P L + E I N+I+SK+D+GIW +++K K+ DNV
Sbjct: 1 MSR-LQEPSSLKRKQPDSRSPLDSLTEHERIIYNVIRSKQDMGIWMQDMKRVAKVPDNVA 59
Query: 499 TKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLV 678
K++KSL K LIKEVVNIQ + KK Y+A EFEP+ EI+GG WY+NG++D +I+ LK
Sbjct: 60 NKALKSLETKKLIKEVVNIQKRGKKHYVAAEFEPATEITGGAWYSNGKMDFVVINILKDQ 119
Query: 679 CFRYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYY 858
C +++ Q+VATLEG+ + I+K+G+ ++++ QI E++ ++VLDN+++EVKS G+G++
Sbjct: 120 CLKWIYKQRVATLEGILDAIRKSGISNVELTTVQIEELVRALVLDNEVVEVKSNGMGEFD 179
Query: 859 SIPIGKTCYRVAGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISPSTCVYYTKWL 1032
SIP+GK CY+ + G P++GA ++IPCG CPRIS CT DG+ISP TC YY++WL
Sbjct: 180 SIPVGKVCYK-STSKGSRGDPKIGAMSSIPCGVCPRISDCTPDGIISPKTCKYYSQWL 236
>dbj|BAJ53222.1| JHL06P13.1 [Jatropha curcas]
Length = 235
Score = 251 bits (640), Expect = 5e-64
Identities = 126/227 (55%), Positives = 160/227 (70%), Gaps = 2/227 (0%)
Frame = +1
Query: 358 KRKRPETQ--LPGLVDAEHAILNLIKSKKDLGIWTREIKLETKLADNVVTKSVKSLLAKG 531
KRK+PE+ L + E A+ N I+SK+D+GIWTR++K ET L D VV KS+K L AK
Sbjct: 8 KRKQPESNSSAQSLTEHEQALYNAIRSKQDMGIWTRDMKRETNLPDTVVNKSLKVLQAKN 67
Query: 532 LIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCFRYMRMQKVA 711
LIKEVVNIQNK +K YMA EFEPSKEI+GG WY G LD I LK C + + KVA
Sbjct: 68 LIKEVVNIQNKGRKYYMATEFEPSKEITGGTWYVEGNLDTMFIGVLKDQCKKQIEKLKVA 127
Query: 712 TLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSIPIGKTCYRV 891
T+E V + I + GV T ++ QQI EIL ++VLDN + EVKS G+G++ SIP+GK CY+
Sbjct: 128 TVEAVTDFINRTGVSTVHLTKQQIEEILKALVLDNKVTEVKSNGMGEFASIPVGKVCYK- 186
Query: 892 AGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISPSTCVYYTKWL 1032
+ G G + P++GA A+IPCG CPRI CT +G+ISP TCVYY KWL
Sbjct: 187 SIGKGSSGDPKIGAMASIPCGVCPRIKHCTPNGIISPQTCVYYGKWL 233