BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00001229
         (558 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ26294.1| hypothetical protein PRUPE_ppa016563mg, partial [...   117   3e-24
gb|EMJ18520.1| hypothetical protein PRUPE_ppa019733mg [Prunus pe...   114   1e-23
gb|EMJ04651.1| hypothetical protein PRUPE_ppa022115mg [Prunus pe...   114   1e-23
ref|XP_002444973.1| hypothetical protein SORBIDRAFT_07g002160 [S...   106   4e-21
gb|EPS73861.1| hypothetical protein M569_00896, partial [Genlise...   105   6e-21
ref|XP_004301837.1| PREDICTED: putative ribonuclease H protein A...   105   8e-21
gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japo...   105   1e-20
ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group] g...   105   1e-20
gb|EMS68524.1| Cyclopropane-fatty-acyl-phospholipid synthase [Tr...   104   1e-20
gb|EEE69154.1| hypothetical protein OsJ_28290 [Oryza sativa Japo...   104   1e-20
gb|EAZ40370.1| hypothetical protein OsJ_24816 [Oryza sativa Japo...   104   1e-20
ref|XP_004959141.1| PREDICTED: putative ribonuclease H protein A...   103   2e-20
ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein A...   103   3e-20
ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein A...   103   3e-20
ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein A...   103   3e-20
gb|AEJ07916.1| putative ZmL1 non-LTR retrotransposon protein [Ze...   103   4e-20
gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold ...   103   4e-20
gb|EPS69206.1| hypothetical protein M569_05560, partial [Genlise...   102   5e-20
gb|EPS63383.1| hypothetical protein M569_11401 [Genlisea aurea]       102   5e-20
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...   102   5e-20

>gb|EMJ26294.1| hypothetical protein PRUPE_ppa016563mg, partial [Prunus persica]
          Length = 925

 Score =  117 bits (292), Expect = 3e-24
 Identities = 67/186 (36%), Positives = 98/186 (52%), Gaps = 1/186 (0%)
 Frame = +1

Query: 4    SWIWKSWIHALYALKIGLCYRIGDGKSVRMWNHAWVSGIHAFIPAPHPSHPTNLICVSDL 183
            S +WKS   A   L++G  ++IGDGKSVR+W   WV    AF+    P        VS+L
Sbjct: 474  SCVWKSIWTARKVLEMGSRFQIGDGKSVRIWGDKWVPRPAAFVVITSPLDGMENTKVSEL 533

Query: 184  MDSSGC-SWNLNLINQIFNVYEAKAILSIPLNSSRSRDRLI*IPCSSGKFTVKSSYQAIM 360
            + + G   W+L  +N +F   +    + IPL+     DR++      G FTVKS+Y+  +
Sbjct: 534  ICNEGSPQWDLQKLNNLFLPVDVVDFVRIPLSIRAPPDRIVWNYDKHGLFTVKSAYRVAL 593

Query: 361  IKKLRELDNPSSSSEISLVKKMWKGTWKLQVKGKIKHFLWRCFHDIVPTKVNLSRKGIEL 540
              ++   D   SSS  S    +W+  W   V  K+K F WR  HDI+PTK NL +KG+++
Sbjct: 594  --RVTSGDEDESSSSNSDTSMLWRHIWNATVPTKLKIFAWRVAHDILPTKANLIKKGVDM 651

Query: 541  DIMCQF 558
              MC F
Sbjct: 652  QDMCMF 657


>gb|EMJ18520.1| hypothetical protein PRUPE_ppa019733mg [Prunus persica]
          Length = 1275

 Score =  114 bits (286), Expect = 1e-23
 Identities = 67/186 (36%), Positives = 97/186 (52%), Gaps = 1/186 (0%)
 Frame = +1

Query: 4    SWIWKSWIHALYALKIGLCYRIGDGKSVRMWNHAWVSGIHAFIPAPHPSHPTNLICVSDL 183
            S +WKS   A   L++G  ++IGDGKSVR+W   WV     F     P        VS+L
Sbjct: 843  SCVWKSIWTARKVLEMGSRFQIGDGKSVRIWGDKWVPRPATFAVITSPLDGMENTKVSEL 902

Query: 184  MDSSGC-SWNLNLINQIFNVYEAKAILSIPLNSSRSRDRLI*IPCSSGKFTVKSSYQAIM 360
            + + G   W+L  +N +F   +   I+ IPL+     DR++      G FTVKS+Y+  +
Sbjct: 903  ICNEGSPQWDLQKLNNLFLPVDVVDIVRIPLSIRAPPDRIVWNYDKHGLFTVKSAYRVAL 962

Query: 361  IKKLRELDNPSSSSEISLVKKMWKGTWKLQVKGKIKHFLWRCFHDIVPTKVNLSRKGIEL 540
              ++   D   SSS  S    +W+  W   V  K+K F WR  HDI+PTK NL +KG+++
Sbjct: 963  --RVTSGDEDESSSSNSDTGMLWRHIWNATVPTKLKIFAWRVAHDILPTKANLIKKGVDM 1020

Query: 541  DIMCQF 558
              MC F
Sbjct: 1021 QDMCMF 1026


>gb|EMJ04651.1| hypothetical protein PRUPE_ppa022115mg [Prunus persica]
          Length = 1755

 Score =  114 bits (286), Expect = 1e-23
 Identities = 67/186 (36%), Positives = 97/186 (52%), Gaps = 1/186 (0%)
 Frame = +1

Query: 4    SWIWKSWIHALYALKIGLCYRIGDGKSVRMWNHAWVSGIHAFIPAPHPSHPTNLICVSDL 183
            S +WKS   A   L++G  ++IGDGKSVR+W   WV     F     P        VS+L
Sbjct: 1323 SCVWKSIWTARKVLEMGSRFQIGDGKSVRIWGDKWVPRPATFAVITSPLDGMENTKVSEL 1382

Query: 184  MDSSGC-SWNLNLINQIFNVYEAKAILSIPLNSSRSRDRLI*IPCSSGKFTVKSSYQAIM 360
            + + G   W+L  +N +F   +   I+ IPL+     DR++      G FTVKS+Y+  +
Sbjct: 1383 ICNEGSPQWDLQKLNNLFLPVDVVDIVRIPLSIRAPPDRIVWNYDKHGLFTVKSAYRVAL 1442

Query: 361  IKKLRELDNPSSSSEISLVKKMWKGTWKLQVKGKIKHFLWRCFHDIVPTKVNLSRKGIEL 540
              ++   D   SSS  S    +W+  W   V  K+K F WR  HDI+PTK NL +KG+++
Sbjct: 1443 --RVTSGDEDESSSSNSDTGMLWRHIWNATVPTKLKIFAWRVAHDILPTKANLIKKGVDM 1500

Query: 541  DIMCQF 558
              MC F
Sbjct: 1501 QDMCMF 1506


>ref|XP_002444973.1| hypothetical protein SORBIDRAFT_07g002160 [Sorghum bicolor]
           gi|241941323|gb|EES14468.1| hypothetical protein
           SORBIDRAFT_07g002160 [Sorghum bicolor]
          Length = 469

 Score =  106 bits (264), Expect = 4e-21
 Identities = 64/187 (34%), Positives = 97/187 (51%), Gaps = 4/187 (2%)
 Frame = +1

Query: 4   SWIWKSWIHALYALKIGLCYRIGDGKSVRMWNHAWVSGIHAFIPAPHPSHPTNLICVSDL 183
           S+ W+S +  + ALK GL +R+GDG  + +W   W+       P   P   T L  VS+L
Sbjct: 70  SYAWRSIVRGVQALKDGLIWRVGDGTQINIWTDPWIPQGVTRRPCT-PRGQTILNKVSEL 128

Query: 184 MDSSGCSWNLNLINQIFNVYEAKAILSIPLNSSRSRDRLI*IPCSSGKFTVKSSYQAIM- 360
           +D     W+ NL+  IF   + K ILSIPL +    D L       G F+VKS+Y  +  
Sbjct: 129 IDPISGEWDRNLVTDIFWEADVKNILSIPLKNEME-DTLAWHYDPKGDFSVKSAYHVLTD 187

Query: 361 ---IKKLRELDNPSSSSEISLVKKMWKGTWKLQVKGKIKHFLWRCFHDIVPTKVNLSRKG 531
              + K R++   +S+S IS     W   WKL    K+K F WR  H+ +P ++N+ R+G
Sbjct: 188 MKELSKRRQIGE-ASASLISPCNNNWHKIWKLHCPPKVKLFFWRFTHNSLPLRMNILRRG 246

Query: 532 IELDIMC 552
           +++D  C
Sbjct: 247 MDIDTRC 253


>gb|EPS73861.1| hypothetical protein M569_00896, partial [Genlisea aurea]
          Length = 1651

 Score =  105 bits (263), Expect = 6e-21
 Identities = 64/183 (34%), Positives = 92/183 (50%)
 Frame = +1

Query: 4    SWIWKSWIHALYALKIGLCYRIGDGKSVRMWNHAWVSGIHAFIPAPHPSHPTNLICVSDL 183
            S++W+    +   L  GL +RIG+G SV  W   W+    AF P          I V D 
Sbjct: 1216 SYVWRGIHSSREVLLGGLRWRIGNGLSVDAWKDPWIPNTFAFKPTSAAPQGVGSILVKDF 1275

Query: 184  MDSSGCSWNLNLINQIFNVYEAKAILSIPLNSSRSRDRLI*IPCSSGKFTVKSSYQAIMI 363
            + S+   WN   + QIF+  + K ILSIPL  +   DRLI      G+++VK+ YQ  ++
Sbjct: 1276 ILSNHSGWNHTRLRQIFSPLDVKHILSIPLAKNSCPDRLIWHYTRHGEYSVKTGYQ--LL 1333

Query: 364  KKLRELDNPSSSSEISLVKKMWKGTWKLQVKGKIKHFLWRCFHDIVPTKVNLSRKGIELD 543
            K   ++  PSSS        MW+  WKLQ+  +I  F WR   +I+P K NL R+ +  D
Sbjct: 1334 KGREDMLRPSSSQVNHDCILMWRALWKLQLPTRILTFGWRFAKNILPLKENLVRRRVGTD 1393

Query: 544  IMC 552
              C
Sbjct: 1394 PTC 1396


>ref|XP_004301837.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 420

 Score =  105 bits (262), Expect = 8e-21
 Identities = 61/186 (32%), Positives = 97/186 (52%)
 Frame = +1

Query: 1   DSWIWKSWIHALYALKIGLCYRIGDGKSVRMWNHAWVSGIHAFIPAPHPSHPTNLICVSD 180
           DS+ W+S +  +  LK G+ ++IG G SV +WN  W+   + F P          + V D
Sbjct: 10  DSYAWRSLMKGVDLLKQGVRFQIGTGSSVSVWNDPWLPRPYTFKPYSGVMEGLEDLMVGD 69

Query: 181 LMDSSGCSWNLNLINQIFNVYEAKAILSIPLNSSRSRDRLI*IPCSSGKFTVKSSYQAIM 360
           L+D    +W ++L+ ++F   E + I  IPL+     DRLI      G ++V+S Y   +
Sbjct: 70  LIDPDTSTWMVDLLEELFYADEVEMIRKIPLSIRSPDDRLIWHFDKHGLYSVRSGYH--L 127

Query: 361 IKKLRELDNPSSSSEISLVKKMWKGTWKLQVKGKIKHFLWRCFHDIVPTKVNLSRKGIEL 540
              +    +  SSS  +   K WK  WK++V  K+K F+WR   +I+PTKV LS+K    
Sbjct: 128 AGGVNADQSRGSSSSPAGSNKTWKQVWKVRVLPKVKSFVWRLMRNILPTKVALSKKICME 187

Query: 541 DIMCQF 558
           + +C F
Sbjct: 188 EQLCPF 193


>gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japonica Group]
          Length = 560

 Score =  105 bits (261), Expect = 1e-20
 Identities = 60/185 (32%), Positives = 101/185 (54%), Gaps = 2/185 (1%)
 Frame = +1

Query: 4   SWIWKSWIHALYALKIGLCYRIGDGKSVRMWNHAWVSGIHAFIPAPHPSHPTNLICVSDL 183
           S+ W+S    L  L+ G+ +R+G+G ++ +W+  W+   H   P   P     +  V +L
Sbjct: 143 SYTWRSICRGLLTLRDGMIWRVGNGAAINIWSDPWIPSDHTRRPIT-PRGRNLVTRVEEL 201

Query: 184 MDSSGCSWNLNLINQIFNVYEAKAILSIPLNSSRSRDRLI*IPCSSGKFTVKSSYQAIMI 363
           +D S  SW++ L+ Q F   +   I +IP++     D L       G F+VKS+Y+    
Sbjct: 202 IDPSTGSWDVELLTQTFWPEDVNMIRTIPVHIEMD-DMLAWHYDEKGLFSVKSAYKVQRD 260

Query: 364 KKLRELDNPSSS-SEISLVKKM-WKGTWKLQVKGKIKHFLWRCFHDIVPTKVNLSRKGIE 537
            +L+     S+  S  S  ++M WK  WK+Q+ GK+KHF+WR  H+I+  +VNL ++G++
Sbjct: 261 GELQRRKRGSAGLSNGSTEREMYWKKVWKMQLPGKVKHFIWRFSHNILALRVNLQQRGMD 320

Query: 538 LDIMC 552
           LD  C
Sbjct: 321 LDSRC 325


>ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group]
            gi|113611795|dbj|BAF22173.1| Os07g0613900 [Oryza sativa
            Japonica Group]
          Length = 1453

 Score =  105 bits (261), Expect = 1e-20
 Identities = 60/185 (32%), Positives = 101/185 (54%), Gaps = 2/185 (1%)
 Frame = +1

Query: 4    SWIWKSWIHALYALKIGLCYRIGDGKSVRMWNHAWVSGIHAFIPAPHPSHPTNLICVSDL 183
            S+ W+S    L  L+ G+ +R+G+G ++ +W+  W+   H   P   P     +  V +L
Sbjct: 1036 SYTWRSICRGLLTLRDGMIWRVGNGAAINIWSDPWIPSDHTRRPIT-PRGRNLVTRVEEL 1094

Query: 184  MDSSGCSWNLNLINQIFNVYEAKAILSIPLNSSRSRDRLI*IPCSSGKFTVKSSYQAIMI 363
            +D S  SW++ L+ Q F   +   I +IP++     D L       G F+VKS+Y+    
Sbjct: 1095 IDPSTGSWDVELLTQTFWPEDVNMIRTIPVHIEMD-DMLAWHYDEKGLFSVKSAYKVQRD 1153

Query: 364  KKLRELDNPSSS-SEISLVKKM-WKGTWKLQVKGKIKHFLWRCFHDIVPTKVNLSRKGIE 537
             +L+     S+  S  S  ++M WK  WK+Q+ GK+KHF+WR  H+I+  +VNL ++G++
Sbjct: 1154 GELQRRKRGSAGLSNGSTEREMYWKKVWKMQLPGKVKHFIWRFSHNILALRVNLQQRGMD 1213

Query: 538  LDIMC 552
            LD  C
Sbjct: 1214 LDSRC 1218


>gb|EMS68524.1| Cyclopropane-fatty-acyl-phospholipid synthase [Triticum urartu]
          Length = 1317

 Score =  104 bits (260), Expect = 1e-20
 Identities = 60/185 (32%), Positives = 96/185 (51%), Gaps = 2/185 (1%)
 Frame = +1

Query: 4    SWIWKSWIHALYALKIGLCYRIGDGKSVRMWNHAWVSGIHAFIPAPHPSHPTNLICVSDL 183
            S++W+S +  +  +K G+ +R+G G+++R+W   W+       P   P   T L  V++L
Sbjct: 897  SYVWRSILQGVEVIKEGMVWRVGTGENIRIWQDPWLPTCAVRFPRS-PRGNTILTKVAEL 955

Query: 184  MDSSGCSWNLNLINQIFNVYEAKAILSIPLNSSRSRDRLI*IPCSSGKFTVKSSY--QAI 357
            +D    SW+  L+ Q FN  EA  IL IP+      D L     +   F+V+S+Y  Q  
Sbjct: 956  LDPDTHSWDEQLVRQTFNTEEAAVILKIPV-FQHHEDFLAWQFDTKELFSVRSAYRVQID 1014

Query: 358  MIKKLRELDNPSSSSEISLVKKMWKGTWKLQVKGKIKHFLWRCFHDIVPTKVNLSRKGIE 537
            M+K+        SS   +   K+W+  WK++  GK+ HF+WR  H+  P   N+ R G+E
Sbjct: 1015 MLKRQARRQQGESSLGDTGNSKLWQELWKVKCPGKVHHFMWRVAHNSHPMLRNIERIGVE 1074

Query: 538  LDIMC 552
            LD  C
Sbjct: 1075 LDTTC 1079


>gb|EEE69154.1| hypothetical protein OsJ_28290 [Oryza sativa Japonica Group]
          Length = 615

 Score =  104 bits (260), Expect = 1e-20
 Identities = 60/187 (32%), Positives = 104/187 (55%), Gaps = 4/187 (2%)
 Frame = +1

Query: 4   SWIWKSWIHALYALKIGLCYRIGDGKSVRMWNHAWV-SGIHAFIPAPHPSHPTNLICVSD 180
           S+ W+S +  + ALK GL +R+GDG ++ +W+  W+ SGI      P      N   V+D
Sbjct: 361 SYSWRSIVRGIQALKKGLIWRVGDGTNIDIWHDPWLPSGITRRPITPRGRTVVNK--VTD 418

Query: 181 LMDSSGCSWNLNLINQIFNVYEAKAILSIPLNSSRSRDRLI*IPCSSGKFTVKSSYQAIM 360
           L+D +   W+  LI  +F   + K IL+IP+ +    D L     + G F+VKS+Y  + 
Sbjct: 419 LIDPTIGKWDKELIEGLFWEEDVKQILTIPIRAG-VEDGLAWHFDNRGIFSVKSAYHVLE 477

Query: 361 IKKLR---ELDNPSSSSEISLVKKMWKGTWKLQVKGKIKHFLWRCFHDIVPTKVNLSRKG 531
            ++ R   + D  SSS + ++ K  W+  WKL    K+KHF+W   H+ +P ++++ ++G
Sbjct: 478 DERRRHKPKQDGASSSGQTNMEKLCWQQIWKLPYLPKVKHFIWHLAHNSLPFRMSIQKRG 537

Query: 532 IELDIMC 552
           +++D  C
Sbjct: 538 MQIDTRC 544


>gb|EAZ40370.1| hypothetical protein OsJ_24816 [Oryza sativa Japonica Group]
          Length = 613

 Score =  104 bits (260), Expect = 1e-20
 Identities = 62/186 (33%), Positives = 98/186 (52%), Gaps = 3/186 (1%)
 Frame = +1

Query: 4   SWIWKSWIHALYALKIGLCYRIGDGKSVRMWNHAWVSGIHAFIPAPHPSHPTNLICVSDL 183
           S+ W+S +  +  LK+GL +R+GDG  + MWN  W+       P   P     L  V+DL
Sbjct: 149 SYSWRSIVRGVQVLKVGLIWRVGDGTDIDMWNDPWIPLGTTKRPIT-PRRGIVLNKVADL 207

Query: 184 MDSSGCSWNLNLINQIFNVYEAKAILSIPLNSSRSRDRLI*IPCSSGKFTVKSSYQAIMI 363
           ++     W+  LI  IF   + K IL+IP+++  S D         G F+VKS+Y  +  
Sbjct: 208 INPITGEWDRELIQDIFWEEDVKNILAIPVHNGYS-DVAAWHFDPRGIFSVKSAYHTLEY 266

Query: 364 KKLREL---DNPSSSSEISLVKKMWKGTWKLQVKGKIKHFLWRCFHDIVPTKVNLSRKGI 534
           ++ R+       SSS + S     W+  W+L    K+KHFLWR  H+ +P + N+S++G+
Sbjct: 267 QRDRQAIRQTGESSSGKTSSAALQWEKLWRLNHLPKVKHFLWRLAHNSLPLRQNISKRGM 326

Query: 535 ELDIMC 552
           E+D  C
Sbjct: 327 EIDTRC 332


>ref|XP_004959141.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Setaria
            italica]
          Length = 950

 Score =  103 bits (258), Expect = 2e-20
 Identities = 62/189 (32%), Positives = 98/189 (51%), Gaps = 6/189 (3%)
 Frame = +1

Query: 4    SWIWKSWIHALYALKIGLCYRIGDGKSVRMWNHAWV-SGIHAFIPAPHPSHPTNLICVSD 180
            S+ W+S +    ALK GL +RIGDG  VR+W+  W+ +GI      P  S    L  V +
Sbjct: 480  SYTWRSIVRGFKALKNGLIWRIGDGSQVRIWDDPWIPTGISRQPRTPRGS--VLLSKVEE 537

Query: 181  LMDSSGCSWNLNLINQIFNVYEAKAILSIPLNSSRSRDRLI*IPCSSGKFTVKSSYQAIM 360
            L+D    +W+  L+ +IF   +   ILSIP+   R  D +       G F+V+S+Y  ++
Sbjct: 538  LIDPITGTWDSQLVREIFWEEDVPNILSIPVRIGRD-DVIAWHHDRKGMFSVRSAYHMLV 596

Query: 361  IKKLRELDNPSSSSEISLVK-----KMWKGTWKLQVKGKIKHFLWRCFHDIVPTKVNLSR 525
             ++ R+       S +   +     + WK  WKL    K++HF+WR  H+ +P K N+ R
Sbjct: 597  DEERRQRKYQQGESSVCCREGDHETQKWKKLWKLPCPPKVRHFIWRLAHNSLPLKQNIKR 656

Query: 526  KGIELDIMC 552
            +G+ LD  C
Sbjct: 657  RGVFLDTRC 665


>ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
           X2 [Citrus sinensis]
          Length = 765

 Score =  103 bits (257), Expect = 3e-20
 Identities = 65/184 (35%), Positives = 97/184 (52%)
 Frame = +1

Query: 4   SWIWKSWIHALYALKIGLCYRIGDGKSVRMWNHAWVSGIHAFIPAPHPSHPTNLICVSDL 183
           S+IW+S +     ++ GL +RIGDGK V+++   W+     F P   PS P +   VS L
Sbjct: 316 SYIWRSILWGREVIRKGLRWRIGDGKLVKVYQSGWLPRPETFKPISPPSLPLDTT-VSVL 374

Query: 184 MDSSGCSWNLNLINQIFNVYEAKAILSIPLNSSRSRDRLI*IPCSSGKFTVKSSYQAIMI 363
           +D   C W  ++I Q F+  +A  IL IPL    S D+++      G ++VKS YQ  + 
Sbjct: 375 IDEDQC-WRDDVIRQHFHQEDAAQILKIPLPRQLSPDQVLWHYDKKGNYSVKSGYQLALQ 433

Query: 364 KKLRELDNPSSSSEISLVKKMWKGTWKLQVKGKIKHFLWRCFHDIVPTKVNLSRKGIELD 543
            K    + PSSS E +     W   W LQ+  K+K F+WR  +D++PT  NL ++ I   
Sbjct: 434 MKFP--NRPSSSKEDN---NSWNSIWYLQIPEKVKIFMWRATNDLLPTSENLWKRRILQT 488

Query: 544 IMCQ 555
             CQ
Sbjct: 489 PWCQ 492


>ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X1
            [Citrus sinensis]
          Length = 968

 Score =  103 bits (257), Expect = 3e-20
 Identities = 65/184 (35%), Positives = 97/184 (52%)
 Frame = +1

Query: 4    SWIWKSWIHALYALKIGLCYRIGDGKSVRMWNHAWVSGIHAFIPAPHPSHPTNLICVSDL 183
            S+IW+S +     ++ GL +RIGDGK V+++   W+     F P   PS P +   VS L
Sbjct: 519  SYIWRSILWGREVIRKGLRWRIGDGKLVKVYQSGWLPRPETFKPISPPSLPLDTT-VSVL 577

Query: 184  MDSSGCSWNLNLINQIFNVYEAKAILSIPLNSSRSRDRLI*IPCSSGKFTVKSSYQAIMI 363
            +D   C W  ++I Q F+  +A  IL IPL    S D+++      G ++VKS YQ  + 
Sbjct: 578  IDEDQC-WRDDVIRQHFHQEDAAQILKIPLPRQLSPDQVLWHYDKKGNYSVKSGYQLALQ 636

Query: 364  KKLRELDNPSSSSEISLVKKMWKGTWKLQVKGKIKHFLWRCFHDIVPTKVNLSRKGIELD 543
             K    + PSSS E +     W   W LQ+  K+K F+WR  +D++PT  NL ++ I   
Sbjct: 637  MKFP--NRPSSSKEDN---NSWNSIWYLQIPEKVKIFMWRATNDLLPTSENLWKRRILQT 691

Query: 544  IMCQ 555
              CQ
Sbjct: 692  PWCQ 695


>ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
           sinensis]
          Length = 769

 Score =  103 bits (257), Expect = 3e-20
 Identities = 65/184 (35%), Positives = 97/184 (52%)
 Frame = +1

Query: 4   SWIWKSWIHALYALKIGLCYRIGDGKSVRMWNHAWVSGIHAFIPAPHPSHPTNLICVSDL 183
           S+IW+S +     ++ GL +RIGDGK V+++   W+     F P   PS P +   VS L
Sbjct: 316 SYIWRSILWGREVIRKGLRWRIGDGKLVKVYQSGWLPRPETFKPISPPSLPLDTT-VSVL 374

Query: 184 MDSSGCSWNLNLINQIFNVYEAKAILSIPLNSSRSRDRLI*IPCSSGKFTVKSSYQAIMI 363
           +D   C W  ++I Q F+  +A  IL IPL    S D+++      G ++VKS YQ  + 
Sbjct: 375 IDEDQC-WRDDVIRQHFHQEDAAQILKIPLPRQLSPDQVLWHYDKKGNYSVKSGYQLALQ 433

Query: 364 KKLRELDNPSSSSEISLVKKMWKGTWKLQVKGKIKHFLWRCFHDIVPTKVNLSRKGIELD 543
            K    + PSSS E +     W   W LQ+  K+K F+WR  +D++PT  NL ++ I   
Sbjct: 434 MKFP--NRPSSSKEDN---NSWNSIWYLQIPEKVKIFMWRATNDLLPTSENLWKRRILQT 488

Query: 544 IMCQ 555
             CQ
Sbjct: 489 PWCQ 492


>gb|AEJ07916.1| putative ZmL1 non-LTR retrotransposon protein [Zea mays]
          Length = 472

 Score =  103 bits (256), Expect = 4e-20
 Identities = 63/185 (34%), Positives = 101/185 (54%), Gaps = 2/185 (1%)
 Frame = +1

Query: 4   SWIWKSWIHALYALKIGLCYRIGDGKSVRMWNHAWVS-GIHAFIPAPHPSHPTNLICVSD 180
           S+ W++ +  L+ LK GL +RIGDG  V +W   W+  G    +  P   + + L  V++
Sbjct: 12  SYTWRNVLKGLHLLKEGLIWRIGDGNQVNIWVDPWIPRGETRRVITPR--NGSLLHKVAE 69

Query: 181 LMDSSGCSWNLNLINQIFNVYEAKAILSIPLNSSRSRDRLI*IPCSSGKFTVKSSYQAIM 360
           L+D    SW+  L+   F   +A  IL+IP+      D L       G F+VKS+Y A+ 
Sbjct: 70  LIDPITGSWDCRLVRDTFLQEDADCILAIPIQEGME-DTLAWHGDPKGNFSVKSAY-ALA 127

Query: 361 IKKLRELDNPSSSSEIS-LVKKMWKGTWKLQVKGKIKHFLWRCFHDIVPTKVNLSRKGIE 537
            ++    +N  +SS IS   + +WK  W + V  KIK FLWR  H+  P +VN++R+GI+
Sbjct: 128 SRRRDHHNNADASSSISGRGENVWKSIWNVNVTNKIKMFLWRLAHNSHPVRVNIARRGIK 187

Query: 538 LDIMC 552
           ++ +C
Sbjct: 188 IETLC 192


>gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 355

 Score =  103 bits (256), Expect = 4e-20
 Identities = 56/163 (34%), Positives = 91/163 (55%), Gaps = 1/163 (0%)
 Frame = +1

Query: 67  IGDGKSVRMWNHAWVSGIHAFIPA-PHPSHPTNLICVSDLMDSSGCSWNLNLINQIFNVY 243
           IGDG  + +W   W+  + +  P+ P P+H  +L  V+ L++  G SWN  ++  IFN  
Sbjct: 3   IGDGSKINLWTMPWIRNLPSHKPSTPMPAHHEDLT-VNYLLNLEGLSWNQQIVTSIFNPQ 61

Query: 244 EAKAILSIPLNSSRSRDRLI*IPCSSGKFTVKSSYQAIMIKKLRELDNPSSSSEISLVKK 423
           +A AILSIPL++    D  I    ++G +TVKS+Y+ I    L   D+  ++S       
Sbjct: 62  DAAAILSIPLHNRLLSDTRIWKTTTTGNYTVKSAYR-ICSDLLHPHDSAHNNSS------ 114

Query: 424 MWKGTWKLQVKGKIKHFLWRCFHDIVPTKVNLSRKGIELDIMC 552
            W   W L +  +++ FLWR  H+ +PT+VNL+ +GI+ +  C
Sbjct: 115 -WMNIWNLNIPHRVRAFLWRLAHNCLPTRVNLNARGIQCEESC 156


>gb|EPS69206.1| hypothetical protein M569_05560, partial [Genlisea aurea]
          Length = 474

 Score =  102 bits (255), Expect = 5e-20
 Identities = 64/184 (34%), Positives = 98/184 (53%), Gaps = 1/184 (0%)
 Frame = +1

Query: 4   SWIWKSWIHALYALKIGLCYRIGDGKSVRMWNHAWVSGIHAFIPA-PHPSHPTNLICVSD 180
           S+ W+S       L  GL +RIGDG S+ +W   W+    AF P+ P P    N+  V +
Sbjct: 21  SYAWRSIHSCRDVLTGGLRWRIGDGSSIDVWKDPWIPDTFAFKPSSPAPLGMANMR-VKE 79

Query: 181 LMDSSGCSWNLNLINQIFNVYEAKAILSIPLNSSRSRDRLI*IPCSSGKFTVKSSYQAIM 360
           L+ S+   WNL+ + Q F+  +   IL+IPL  +   DRLI      G+++VK+ YQ  +
Sbjct: 80  LIISNQAEWNLSRLRQTFSSSDVHCILAIPLAKNPYPDRLIWHFTRQGEYSVKTGYQ--L 137

Query: 361 IKKLRELDNPSSSSEISLVKKMWKGTWKLQVKGKIKHFLWRCFHDIVPTKVNLSRKGIEL 540
           +K   E+++P SS   +    MW+  WKL++  +I  F WR    I+P K +L R+ I  
Sbjct: 138 LKSTSEMNSPGSSRSNANKILMWQALWKLKLPMRILTFNWRFGKHILPLKDSLVRRRIGT 197

Query: 541 DIMC 552
           D  C
Sbjct: 198 DPTC 201


>gb|EPS63383.1| hypothetical protein M569_11401 [Genlisea aurea]
          Length = 1469

 Score =  102 bits (255), Expect = 5e-20
 Identities = 63/184 (34%), Positives = 90/184 (48%)
 Frame = +1

Query: 4    SWIWKSWIHALYALKIGLCYRIGDGKSVRMWNHAWVSGIHAFIPAPHPSHPTNLICVSDL 183
            S+ W+S + A   L  GL +R GDG  + +WN  W+    +F P       +  + VSDL
Sbjct: 1280 SFTWRSLLTAKNLLLSGLRWRPGDGVHINVWNSPWLPRAGSFKPMFRNPALSPHLRVSDL 1339

Query: 184  MDSSGCSWNLNLINQIFNVYEAKAILSIPLNSSRSRDRLI*IPCSSGKFTVKSSYQAIMI 363
            +    C WN + I Q+F   +A  ILSIPL SS   DR+I      G +TVKS Y  +  
Sbjct: 1340 ISPDTCDWNRSYIQQVFLPADAATILSIPLGSSGHHDRMIWHYSREGTYTVKSGY--LHA 1397

Query: 364  KKLRELDNPSSSSEISLVKKMWKGTWKLQVKGKIKHFLWRCFHDIVPTKVNLSRKGIELD 543
            + +    NP  +     +   WK  WK+ +  KI  F WR    I+PTK  L  + I  D
Sbjct: 1398 RSIESNRNPGPAHSNPEISAFWKHLWKVALPPKIILFGWRLCKGILPTKDLLFHRKICPD 1457

Query: 544  IMCQ 555
             +C+
Sbjct: 1458 SLCE 1461


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score =  102 bits (255), Expect = 5e-20
 Identities = 62/183 (33%), Positives = 94/183 (51%)
 Frame = +1

Query: 4    SWIWKSWIHALYALKIGLCYRIGDGKSVRMWNHAWVSGIHAFIPAPHPSHPTNLICVSDL 183
            S++W+S++     L+ G+ +RIGDGK VR++   WV G+ +F P      P   + VSDL
Sbjct: 1192 SYLWRSFLWGRELLRKGVRWRIGDGKEVRVFIDPWVPGLPSFRPILRQGAPL-FLRVSDL 1250

Query: 184  MDSSGCSWNLNLINQIFNVYEAKAILSIPLNSSRSRDRLI*IPCSSGKFTVKSSYQAIMI 363
            + ++G  WN+  +N  F   E +AI SI + ++R  D  +   C +G++TVKS Y     
Sbjct: 1251 LHNNG-GWNMEALNYWFTDDECEAISSITVGATRRPDVYMWNYCKNGRYTVKSGYWLACE 1309

Query: 364  KKLRELDNPSSSSEISLVKKMWKGTWKLQVKGKIKHFLWRCFHDIVPTKVNLSRKGIELD 543
            +   E  N      +   +  WK  WKL++  KI HFLWRC    +P    L  K I   
Sbjct: 1310 ENREEAIN-----IVLAPRNFWKHLWKLKLPPKINHFLWRCSMGFIPCMEVLLWKHIAHS 1364

Query: 544  IMC 552
              C
Sbjct: 1365 ASC 1367