BLASTX nr result

ID: Rehmannia25_contig00000957 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00000957
         (370 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004239238.1| PREDICTED: squamosa promoter-binding-like pr...    56   4e-06

>ref|XP_004239238.1| PREDICTED: squamosa promoter-binding-like protein 16-like isoform 1
           [Solanum lycopersicum] gi|460387124|ref|XP_004239239.1|
           PREDICTED: squamosa promoter-binding-like protein
           16-like isoform 2 [Solanum lycopersicum]
          Length = 312

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 40/91 (43%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
 Frame = -3

Query: 368 NSQKMYSDDGLNQVVDSDRAXXXXXSATQVTRELGLNRLVQ-----PHSESLVHNMNHCG 204
           + QK++S  GLN +VDSDRA     SA  VTRE+GL+ +VQ     P S+S  H + + G
Sbjct: 202 SGQKIFSS-GLNDIVDSDRALSLLSSAPAVTREIGLSHMVQQPASIPRSQS--HGLQYDG 258

Query: 203 FGQYPFAQE--SKPLVS-ATDASTP-HFPQM 123
              +PFAQ+  SKP  S  +++S+P HF  M
Sbjct: 259 LSHFPFAQDFNSKPQDSHVSNSSSPLHFHDM 289


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