BLASTX nr result
ID: Rehmannia25_contig00000913
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00000913
(337 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera] 67 2e-09
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 67 2e-09
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 67 2e-09
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 67 2e-09
emb|CAN75921.1| hypothetical protein VITISV_030750 [Vitis vinifera] 66 5e-09
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 66 5e-09
emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera] 63 5e-08
emb|CAN79451.1| hypothetical protein VITISV_001677 [Vitis vinifera] 63 5e-08
emb|CAN72340.1| hypothetical protein VITISV_029049 [Vitis vinifera] 62 6e-08
ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] g... 62 8e-08
emb|CAE04897.3| OSJNBa0042I15.19 [Oryza sativa Japonica Group] 61 1e-07
emb|CAN84102.1| hypothetical protein VITISV_041248 [Vitis vinifera] 61 2e-07
gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subc... 60 4e-07
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 60 4e-07
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu... 60 4e-07
emb|CAN62728.1| hypothetical protein VITISV_003090 [Vitis vinifera] 60 4e-07
gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vul... 60 4e-07
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ... 60 4e-07
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi... 60 4e-07
gb|AAK29467.1| polyprotein-like [Solanum chilense] 60 4e-07
>emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera]
Length = 344
Score = 67.4 bits (163), Expect = 2e-09
Identities = 40/114 (35%), Positives = 56/114 (49%), Gaps = 3/114 (2%)
Frame = -1
Query: 334 PSKKGNLNQSN---DQANLASSSENAGDVFMVTGICDVPIVNSVHSSSVCENEWLIDSAC 164
P +KG N+ N A A + N DV +V + NS ++EW++DS C
Sbjct: 195 PDRKGKENKRNYNSGDATFAKENSNTTDVLLVX------VTNS-------DDEWILDSGC 241
Query: 163 TFHMSPFKNLFSNYKKVKNSFVSMANEKKCNVFGIGDICLKFESGYAYTLKNVR 2
++HMSP + FS Y+ + V M N+ C V GI I +K G TL NVR
Sbjct: 242 SYHMSPNGDWFSTYQPIDGGKVLMGNKVACKVVGIHXIQIKMHGGIIRTLTNVR 295
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 67.0 bits (162), Expect = 2e-09
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Frame = -1
Query: 295 ANLASSSENAGDVFMVTGICDVPIVNSVHSSSVCENEWLIDSACTFHMSPFKNLFSNYKK 116
A+ A+S +++GD +V C +EW++DSAC+FH+ +N FS+YK
Sbjct: 264 ASAAASDDDSGDCLVVFAGCVAG-----------HDEWILDSACSFHICTKRNWFSSYKP 312
Query: 115 V-KNSFVSMANEKKCNVFGIGDICLKFESGYAYTLKNVR 2
V K V M ++ C + GIG + +K + G TLKNVR
Sbjct: 313 VQKGDVVRMGDDNPCAIVGIGSVQIKTDDGMTRTLKNVR 351
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 67.0 bits (162), Expect = 2e-09
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Frame = -1
Query: 295 ANLASSSENAGDVFMVTGICDVPIVNSVHSSSVCENEWLIDSACTFHMSPFKNLFSNYKK 116
A+ A+S +++GD +V C +EW++DSAC+FH+ +N FS+YK
Sbjct: 264 ASAAASDDDSGDCLVVFAGCVAG-----------HDEWILDSACSFHICTKRNWFSSYKP 312
Query: 115 V-KNSFVSMANEKKCNVFGIGDICLKFESGYAYTLKNVR 2
V K V M ++ C + GIG + +K + G TLKNVR
Sbjct: 313 VQKGDVVRMGDDNPCAIVGIGSVQIKTDDGMTRTLKNVR 351
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 67.0 bits (162), Expect = 2e-09
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Frame = -1
Query: 295 ANLASSSENAGDVFMVTGICDVPIVNSVHSSSVCENEWLIDSACTFHMSPFKNLFSNYKK 116
A+ A+S +++GD +V C +EW++DSAC+FH+ +N FS+YK
Sbjct: 264 ASAAASDDDSGDCLVVFAGCVAG-----------HDEWILDSACSFHICTKRNWFSSYKP 312
Query: 115 V-KNSFVSMANEKKCNVFGIGDICLKFESGYAYTLKNVR 2
V K V M ++ C + GIG + +K + G TLKNVR
Sbjct: 313 VQKGDVVRMGDDNPCAIVGIGSVQIKTDDGMTRTLKNVR 351
>emb|CAN75921.1| hypothetical protein VITISV_030750 [Vitis vinifera]
Length = 437
Score = 65.9 bits (159), Expect = 5e-09
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 3/112 (2%)
Frame = -1
Query: 328 KKGNLNQS--NDQANLASSSENAGD-VFMVTGICDVPIVNSVHSSSVCENEWLIDSACTF 158
K+G+ N+ N + N N GD V ++ G ++N S EW++DS C+F
Sbjct: 69 KEGHFNKDCPNRRQNTVKKIVNEGDAVVILDGYDSAELLNMTEVDS--GKEWILDSGCSF 126
Query: 157 HMSPFKNLFSNYKKVKNSFVSMANEKKCNVFGIGDICLKFESGYAYTLKNVR 2
HM P K F N+K+ V + N K C + G G + +K G L++VR
Sbjct: 127 HMCPIKAWFENFKEADGGHVLLGNNKHCKILGTGTVRIKHYDGIEKVLEDVR 178
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 65.9 bits (159), Expect = 5e-09
Identities = 36/99 (36%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Frame = -1
Query: 295 ANLASSSENAGDVFMVTGICDVPIVNSVHSSSVCENEWLIDSACTFHMSPFKNLFSNYKK 116
A+ A S +++GD +V C +EW++DSAC+FH+ +N FS+YK
Sbjct: 266 ASAAVSDDDSGDCLVVFAGCVAG-----------HDEWILDSACSFHICTKRNWFSSYKP 314
Query: 115 V-KNSFVSMANEKKCNVFGIGDICLKFESGYAYTLKNVR 2
V K V M ++ C + GIG + +K + G TLKNVR
Sbjct: 315 VQKGDVVRMGDDNPCAIVGIGSVQIKTDDGMTRTLKNVR 353
>emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]
Length = 777
Score = 62.8 bits (151), Expect = 5e-08
Identities = 26/62 (41%), Positives = 38/62 (61%)
Frame = -1
Query: 187 EWLIDSACTFHMSPFKNLFSNYKKVKNSFVSMANEKKCNVFGIGDICLKFESGYAYTLKN 8
EW++DS CT+HM P ++ FS+Y++V + + N CNV GIG + + G TLK
Sbjct: 177 EWVLDSGCTYHMCPRRDWFSSYQEVNGGKLLLGNNMSCNVVGIGTMAINMHDGKTRTLKE 236
Query: 7 VR 2
VR
Sbjct: 237 VR 238
>emb|CAN79451.1| hypothetical protein VITISV_001677 [Vitis vinifera]
Length = 805
Score = 62.8 bits (151), Expect = 5e-08
Identities = 27/61 (44%), Positives = 40/61 (65%)
Frame = -1
Query: 184 WLIDSACTFHMSPFKNLFSNYKKVKNSFVSMANEKKCNVFGIGDICLKFESGYAYTLKNV 5
W++DSAC++HM+P K+ F+ Y+ V + V M N+ C V GIG+I +K G TL +V
Sbjct: 145 WILDSACSYHMTPNKDWFNTYRSVNSGSVLMGNDASCKVAGIGNIIIKMFDGVVRTLCDV 204
Query: 4 R 2
R
Sbjct: 205 R 205
>emb|CAN72340.1| hypothetical protein VITISV_029049 [Vitis vinifera]
Length = 358
Score = 62.4 bits (150), Expect = 6e-08
Identities = 37/114 (32%), Positives = 52/114 (45%), Gaps = 3/114 (2%)
Frame = -1
Query: 337 CPSKKGNLNQSNDQAN---LASSSENAGDVFMVTGICDVPIVNSVHSSSVCENEWLIDSA 167
CP +K N + ++ +A S + DV MV NEW++DS+
Sbjct: 72 CPKRKPKKNDQDSESTDVVIAFESYDTVDVLMVV-------------EKDLTNEWILDSS 118
Query: 166 CTFHMSPFKNLFSNYKKVKNSFVSMANEKKCNVFGIGDICLKFESGYAYTLKNV 5
C FHM P K+ F +Y ++K V M N + VFGI I L+ G L NV
Sbjct: 119 CAFHMCPIKSWFFSYMELKEGKVLMGNNEAFKVFGIDSIKLRLHDGXERMLTNV 172
>ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group]
gi|255672802|dbj|BAH90873.1| Os01g0116166 [Oryza sativa
Japonica Group]
Length = 778
Score = 62.0 bits (149), Expect = 8e-08
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Frame = -1
Query: 325 KGNLNQSNDQANLASSSENAGDVFMVTGI-CDVPIVNSVHSSSVCENEWLIDSACTFHMS 149
K + DQ+ A E G +VT D ++ + + ++W++D+ACT+HM
Sbjct: 218 KAQVATVGDQSPEAGKKEEEGKAAVVTDEKSDAELLVAYVGCAQTSDQWILDTACTYHMC 277
Query: 148 PFKNLFSNYKKVKNSFVSMANEKKCNVFGIGDICLKFESGYAYTLKNVR 2
P ++ F+ Y+ V+ V M ++ C V GIG + +K G TL +VR
Sbjct: 278 PNRDWFATYETVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVR 326
>emb|CAE04897.3| OSJNBa0042I15.19 [Oryza sativa Japonica Group]
Length = 478
Score = 61.2 bits (147), Expect = 1e-07
Identities = 35/112 (31%), Positives = 61/112 (54%)
Frame = -1
Query: 337 CPSKKGNLNQSNDQANLASSSENAGDVFMVTGICDVPIVNSVHSSSVCENEWLIDSACTF 158
CP+ KG +AN+A+SS ++ + CD+ ++S S W++DSA +F
Sbjct: 291 CPTLKGKA-----KANVATSSNDSD-----SDGCDLLTMSSAQSKDA--EAWILDSASSF 338
Query: 157 HMSPFKNLFSNYKKVKNSFVSMANEKKCNVFGIGDICLKFESGYAYTLKNVR 2
H++P K FS+YK + FV + ++ G+G++ +K E G + L+ VR
Sbjct: 339 HVTPRKEWFSSYKSGEFGFVYLGDDTSYPAVGVGEVKIKLEDGGEHVLQGVR 390
>emb|CAN84102.1| hypothetical protein VITISV_041248 [Vitis vinifera]
Length = 894
Score = 60.8 bits (146), Expect = 2e-07
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Frame = -1
Query: 292 NLASSSENAGDVFMVT-GICDVPIVNSVHSSSVCENEWLIDSACTFHMSPFKNLFSNYKK 116
N + N GD M+ G + ++N S EW++DS C+FHM P K F ++K+
Sbjct: 247 NTXKKTMNEGDATMILDGYDNAGVLNVAEVDS--GKEWILDSGCSFHMCPIKAWFEDFKE 304
Query: 115 VKNSFVSMANEKKCNVFGIGDICLKFESGYAYTLKNVR 2
V + N K C + G G + +K G L+++R
Sbjct: 305 ANGGHVLLGNNKHCKILGTGTVKIKHYDGIERVLEDIR 342
>gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1131
Score = 59.7 bits (143), Expect = 4e-07
Identities = 35/104 (33%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Frame = -1
Query: 310 QSNDQANLASSSENAGDVFMVTGICDVPIVNSVHSSSVCENEWLIDSACTFHMSPFKNLF 131
+S+ +A++ +S+EN+ +G C V V S +EW++D+AC+FH+ ++ F
Sbjct: 209 KSDGKASVVTSAENSD-----SGDCLVVFAGCVAS----HDEWILDTACSFHICINRDWF 259
Query: 130 SNYKKVKN-SFVSMANEKKCNVFGIGDICLKFESGYAYTLKNVR 2
S+YK V+N V M ++ + GIG + +K G TLK+VR
Sbjct: 260 SSYKSVQNGDVVRMGDDNPHEIVGIGSVQIKTHDGMTRTLKDVR 303
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 59.7 bits (143), Expect = 4e-07
Identities = 35/104 (33%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Frame = -1
Query: 310 QSNDQANLASSSENAGDVFMVTGICDVPIVNSVHSSSVCENEWLIDSACTFHMSPFKNLF 131
+S+ +A++ +S++N+ +G C V V S +EW++D+AC+FH+ ++ F
Sbjct: 259 KSDGKASVVTSAKNSD-----SGDCLVVFAGCVAS----HDEWILDTACSFHIYINRDWF 309
Query: 130 SNYKKVKN-SFVSMANEKKCNVFGIGDICLKFESGYAYTLKNVR 2
S+YK V+N V M N+ + GIG + +K G TLK+VR
Sbjct: 310 SSYKSVQNGDVVRMGNDNPREIVGIGSVQIKTHDGITRTLKDVR 353
>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 867
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/78 (34%), Positives = 47/78 (60%)
Frame = -1
Query: 235 DVPIVNSVHSSSVCENEWLIDSACTFHMSPFKNLFSNYKKVKNSFVSMANEKKCNVFGIG 56
D+ ++ S+ S+S+ +EW++DS CT+HM P ++ F ++++ V M N+ C GIG
Sbjct: 209 DISLIVSL-SASLYLDEWILDSGCTYHMCPIRDWFFEFQELDGGVVYMGNDNPCKTVGIG 267
Query: 55 DICLKFESGYAYTLKNVR 2
I L+ G L++VR
Sbjct: 268 SIKLRNHDGSTRILRDVR 285
>emb|CAN62728.1| hypothetical protein VITISV_003090 [Vitis vinifera]
Length = 553
Score = 59.7 bits (143), Expect = 4e-07
Identities = 35/114 (30%), Positives = 50/114 (43%), Gaps = 3/114 (2%)
Frame = -1
Query: 337 CPSKKGNLNQSNDQAN---LASSSENAGDVFMVTGICDVPIVNSVHSSSVCENEWLIDSA 167
CP +K N + ++ +A S + DV MV NEW++D +
Sbjct: 241 CPKRKPKKNDQBSESXDVAIAFESYDTXDVLMVV-------------EKDLTNEWILDXS 287
Query: 166 CTFHMSPFKNLFSNYKKVKNSFVSMANEKKCNVFGIGDICLKFESGYAYTLKNV 5
C FH P K+ F +Y ++K V M N + VFGI I L+ G L NV
Sbjct: 288 CAFHXCPIKSWFFSYXELKEGKVLMGNNEAFKVFGIDSIKLRLHDGXERMLTNV 341
>gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vulgaris]
Length = 324
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/78 (34%), Positives = 46/78 (58%)
Frame = -1
Query: 235 DVPIVNSVHSSSVCENEWLIDSACTFHMSPFKNLFSNYKKVKNSFVSMANEKKCNVFGIG 56
D+ ++ S+ +SS +EW++DS CT+HM P ++ F ++++ V M N+ C GIG
Sbjct: 248 DISLIVSLSASSY-PDEWILDSGCTYHMCPIRDWFFEFQELDGGVVYMGNDNPCKTAGIG 306
Query: 55 DICLKFESGYAYTLKNVR 2
I L+ G L++VR
Sbjct: 307 SIKLRNHDGSTRILRDVR 324
>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
gi|108708632|gb|ABF96427.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1326
Score = 59.7 bits (143), Expect = 4e-07
Identities = 35/104 (33%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Frame = -1
Query: 310 QSNDQANLASSSENAGDVFMVTGICDVPIVNSVHSSSVCENEWLIDSACTFHMSPFKNLF 131
+S+ +A++ +S+EN+ +G C V V S +EW++D+AC+FH+ ++ F
Sbjct: 259 KSDGKASVVTSAENSD-----SGDCLVVFAGCVAS----HDEWILDTACSFHICINRDWF 309
Query: 130 SNYKKVKN-SFVSMANEKKCNVFGIGDICLKFESGYAYTLKNVR 2
S+YK V+N V M ++ + GIG + +K G TLK+VR
Sbjct: 310 SSYKSVQNGDVVRMGDDNPREIVGIGSVQIKTHDGMTRTLKDVR 353
>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1335
Score = 59.7 bits (143), Expect = 4e-07
Identities = 31/110 (28%), Positives = 57/110 (51%)
Frame = -1
Query: 331 SKKGNLNQSNDQANLASSSENAGDVFMVTGICDVPIVNSVHSSSVCENEWLIDSACTFHM 152
+K N +++LA S+E ++ + +V + NEW++D+ C+FHM
Sbjct: 241 NKSKQQGSDNGESSLAKSTEAFNPAMVLLATDETLVV-----TDSIANEWVLDTGCSFHM 295
Query: 151 SPFKNLFSNYKKVKNSFVSMANEKKCNVFGIGDICLKFESGYAYTLKNVR 2
+P K+ F ++K++ + +V M N+ V GIG I ++ G L +VR
Sbjct: 296 TPRKDWFKDFKELSSGYVKMGNDTYSPVKGIGSIKIRNSDGSQVILTDVR 345
>gb|AAK29467.1| polyprotein-like [Solanum chilense]
Length = 1328
Score = 59.7 bits (143), Expect = 4e-07
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
Frame = -1
Query: 337 CPSKKGNLNQSNDQAN---LASSSENAGDVFMVTGICDVPIVNSVHSSSVCENEWLIDSA 167
CP+ K +S+ Q N A+ +N DV ++ + +H + E+EW++D+A
Sbjct: 246 CPNPKRGKGESSGQKNDDNTAAMVQNNDDVVLLINEEE----ECMHLAGT-ESEWVVDTA 300
Query: 166 CTFHMSPFKNLFSNYKKVKNSFVSMANEKKCNVFGIGDICLKFESGYAYTLKNVR 2
++H +P ++LF Y V M N + GIGDIC K G LK+VR
Sbjct: 301 ASYHATPVRDLFCRYVAGDYGNVKMGNTSYSKIAGIGDICFKTNVGCTLVLKDVR 355