BLASTX nr result

ID: Rehmannia25_contig00000819 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00000819
         (1071 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006368107.1| PREDICTED: heterogeneous nuclear ribonucleop...    58   6e-06
ref|XP_006357669.1| PREDICTED: heterogeneous nuclear ribonucleop...    58   6e-06
ref|XP_006357668.1| PREDICTED: fibroin heavy chain-like [Solanum...    58   6e-06

>ref|XP_006368107.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like, partial
            [Solanum tuberosum]
          Length = 238

 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 42/97 (43%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
 Frame = -3

Query: 1069 VEIKKAEPKKPSNQTPGPAYGSESRGRAXXXXXXXXXXXXXXXXXXXXGPASYRSMXXXX 890
            VEIKKAEPKKPSN    PAYGS SRGR                     GPASYRS     
Sbjct: 106  VEIKKAEPKKPSNPASAPAYGSNSRGRGYGDSYGGFADSYSGYDSGGFGPASYRSF---- 161

Query: 889  XXXXXXXXXXXXXXXXXXXXGDYGSSEF-GYRGDGPL 782
                                GD+GSSEF GYRGD  L
Sbjct: 162  -------GSRYGDYGYGGRYGDFGSSEFGGYRGDPSL 191


>ref|XP_006357669.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Solanum
            tuberosum]
          Length = 342

 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 42/97 (43%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
 Frame = -3

Query: 1069 VEIKKAEPKKPSNQTPGPAYGSESRGRAXXXXXXXXXXXXXXXXXXXXGPASYRSMXXXX 890
            VEIKKAEPKKPSN    PAYGS SRGR                     GPASYRS     
Sbjct: 174  VEIKKAEPKKPSNPASAPAYGSNSRGRGYGDSYGGFADSYSGYDSGGFGPASYRSF---- 229

Query: 889  XXXXXXXXXXXXXXXXXXXXGDYGSSEF-GYRGDGPL 782
                                GD+GSSEF GYRGD  L
Sbjct: 230  -------GSRYGDYGYGGRYGDFGSSEFGGYRGDPSL 259


>ref|XP_006357668.1| PREDICTED: fibroin heavy chain-like [Solanum tuberosum]
          Length = 534

 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 42/97 (43%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
 Frame = -3

Query: 1069 VEIKKAEPKKPSNQTPGPAYGSESRGRAXXXXXXXXXXXXXXXXXXXXGPASYRSMXXXX 890
            VEIKKAEPKKPSN    PAYGS SRGR                     GPASYRS     
Sbjct: 174  VEIKKAEPKKPSNPASAPAYGSNSRGRGYGDSYGGFADSYSGYDSGGFGPASYRSF---- 229

Query: 889  XXXXXXXXXXXXXXXXXXXXGDYGSSEF-GYRGDGPL 782
                                GD+GSSEF GYRGD  L
Sbjct: 230  -------GSRYGDYGYGGRYGDFGSSEFGGYRGDPSL 259


Top