BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00000614
         (1487 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]         604   e-170
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...   599   e-168
emb|CCH50976.1| T4.15 [Malus x robusta]                               521   e-145
gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arac...   513   e-143
gb|ABB00038.1| reverse transcriptase family member [Glycine max]      486   e-134
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas...   482   e-133
emb|CDJ92648.1| RNA-directed DNA polymerase (reverse transcripta...   460   e-127
ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840...   452   e-124
emb|CBA11992.1| endonuclease-reverse transcriptase HmRTE-e01 [He...   450   e-124
gb|EHJ75084.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan...   449   e-123
gb|EHJ64905.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan...   449   e-123
gb|EHJ65195.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan...   441   e-121
emb|CDJ90320.1| RNA-directed DNA polymerase (reverse transcripta...   430   e-118
gb|ADI61822.1| endonuclease-reverse transcriptase [Bombyx mori]       429   e-117
gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Tritic...   424   e-116
emb|CDJ93835.1| RNA-directed DNA polymerase (reverse transcripta...   419   e-114
emb|CDJ94991.1| RNA-directed DNA polymerase (reverse transcripta...   414   e-113
gb|EMT14674.1| Methyltransferase-like protein 13 [Aegilops tausc...   407   e-111
ref|XP_006010506.1| PREDICTED: uncharacterized protein LOC102366...   404   e-110
gb|EHJ71530.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan...   402   e-109

>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 562

 Score =  604 bits (1557), Expect = e-170
 Identities = 288/438 (65%), Positives = 353/438 (80%)
 Frame = -3

Query: 1485 DDIPIEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGI 1306
            D+IPIE WK LG   I+WLTKLFN IL++KKMP EWRKS L+PIYKNKGDIQ+C NYRGI
Sbjct: 75   DNIPIEVWKDLGEKDINWLTKLFNEILRSKKMPGEWRKSTLVPIYKNKGDIQSCENYRGI 134

Query: 1305 KLISHTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHM 1126
            KL++HTMKLWERVIE  +R ET + +NQFGFM GRS  EAI+L+RR+ E+Y   K+DLHM
Sbjct: 135  KLMTHTMKLWERVIERGLRKETQVTENQFGFMSGRSITEAIYLLRRMMERYRSNKRDLHM 194

Query: 1125 VFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIG 946
            VFIDLEKAYDRV R+++W+VLEK  ++IAYI AIKDMYDG TT ++T  G++ EFP  IG
Sbjct: 195  VFIDLEKAYDRVPREVLWKVLEKMRVRIAYIRAIKDMYDGATTSVKTQGGVTEEFPIGIG 254

Query: 945  LHQGSALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKLEVWREALES 766
            LHQGS+LSPYLF ++++ +T+H+Q+ +P C+LFADDIVL+ E RE +N KLE+W+EALE 
Sbjct: 255  LHQGSSLSPYLFTIVLEVLTEHIQEPVPWCILFADDIVLMGELREDLNKKLELWKEALEV 314

Query: 765  KGFTISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEENGEINKDVTH 586
             G  ISR+KTEYMEC FS    N   +V+I  + +   KSFKYLG II++NGEI +DV H
Sbjct: 315  YGLRISRSKTEYMECKFSLRRENTNIEVEIGENILRKVKSFKYLGCIIQDNGEIEQDVNH 374

Query: 585  RIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEHEQKMRVAEM 406
            RIQAGW+KWRSAS  +CD+K+PLKLKGKFY+TAIRPAMLYG EC A K EHE K+ VAE+
Sbjct: 375  RIQAGWSKWRSASGFICDKKVPLKLKGKFYRTAIRPAMLYGTECCAAKGEHEHKLSVAEV 434

Query: 405  RMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIRETRLRWFGHVYRRPLDAPVRRLEGRE 226
            +MLRWM GHTRLD+IRNE IR +VGVAPI EKI E+RLRWFGHV RRP++ PVRR++  E
Sbjct: 435  KMLRWMSGHTRLDKIRNEDIRERVGVAPIVEKIVESRLRWFGHVRRRPIEHPVRRVDEME 494

Query: 225  SLTQIKRGRGRPKKTWKE 172
               Q  +GRGRPKKT  E
Sbjct: 495  D-GQRAKGRGRPKKTIHE 511


>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
            domestica]
          Length = 622

 Score =  599 bits (1544), Expect = e-168
 Identities = 290/470 (61%), Positives = 357/470 (75%)
 Frame = -3

Query: 1485 DDIPIEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGI 1306
            DDIPIE WK LG  GI+WL  LFN ILKTKKMP+EWR S L+PIYKNKGD+QNC NYRGI
Sbjct: 185  DDIPIEVWKVLGETGITWLIDLFNRILKTKKMPNEWRTSPLVPIYKNKGDVQNCMNYRGI 244

Query: 1305 KLISHTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHM 1126
            KL+SHTMKLWERVIE R+R ET + DNQFGFMPGRST+EAI+L+RRL E+Y + K+DLHM
Sbjct: 245  KLMSHTMKLWERVIEHRLRQETRVSDNQFGFMPGRSTMEAIYLLRRLMERYRDGKKDLHM 304

Query: 1125 VFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIG 946
            VFIDLEKAYDRV+RDI+WR+LEK+G+++AYI AIKDMY+G  T +RT  G +  FP T+G
Sbjct: 305  VFIDLEKAYDRVSRDIIWRILEKKGVRVAYIQAIKDMYEGAKTAVRTYEGQTESFPITVG 364

Query: 945  LHQGSALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKLEVWREALES 766
            LHQGS+LSPYLF L++DE+T H+Q  IP CMLFA DIVLIDET+EGVNAKL +WRE LES
Sbjct: 365  LHQGSSLSPYLFALVMDELTGHIQDDIPWCMLFAYDIVLIDETQEGVNAKLNLWREVLES 424

Query: 765  KGFTISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEENGEINKDVTH 586
            KG  +SR+KTEYMEC FS N   NE  V+I   E+  +  F+YLGSI+++NGE+++D+ H
Sbjct: 425  KGLCLSRSKTEYMECKFSANGSQNELGVRIGDQEIPKSDRFRYLGSILQKNGELDEDLNH 484

Query: 585  RIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEHEQKMRVAEM 406
            RIQAGW KW+SAS +LCDR++PLKLKGKFY+TAIRPAML                     
Sbjct: 485  RIQAGWMKWKSASGVLCDRRMPLKLKGKFYRTAIRPAML--------------------- 523

Query: 405  RMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIRETRLRWFGHVYRRPLDAPVRRLEGRE 226
                        D+IRNE IR KVGVA I+ K+RE  LRWFGHV RRP DAP+RR +   
Sbjct: 524  -----------KDKIRNEDIRGKVGVAEIEGKMRENWLRWFGHVQRRPTDAPIRRCD-YG 571

Query: 225  SLTQIKRGRGRPKKTWKEAIKHDMLYLEINENMAYDRKRWRDMIRIADPT 76
            +  Q ++GRGRP+KT +E ++ D+ YL++ E+M  DR +WR  I +ADPT
Sbjct: 572  TKVQGRKGRGRPRKTLEETLRKDLEYLDLMEDMTQDRAQWRSKIHVADPT 621


>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score =  521 bits (1341), Expect = e-145
 Identities = 267/471 (56%), Positives = 325/471 (69%), Gaps = 1/471 (0%)
 Frame = -3

Query: 1485 DDIPIEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGI 1306
            DDIPIE WK LG  GI+WLT LFN ILKTKKMP+EWR S L+PIYKNKGD+QNC NYRGI
Sbjct: 581  DDIPIEVWKVLGETGITWLTDLFNRILKTKKMPNEWRTSTLVPIYKNKGDVQNCMNYRGI 640

Query: 1305 KLISHTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHM 1126
            KL+SHTMKLWERVIE R+R ET + DNQFGFMPGRST+EAI+L+RRL E+Y +       
Sbjct: 641  KLMSHTMKLWERVIEHRLRQETRVSDNQFGFMPGRSTMEAIYLLRRLMERYRDG------ 694

Query: 1125 VFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIG 946
                                  K+ + + +ID ++  YD      R P  I         
Sbjct: 695  ----------------------KKDLHMVFID-LEKAYD------RVPRDI--------- 716

Query: 945  LHQGSALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKLEVWREALES 766
                              + + L+K    CMLFADDIVLIDET+EGVNAKL +WRE LES
Sbjct: 717  ------------------LWRILEKK--GCMLFADDIVLIDETQEGVNAKLNLWREVLES 756

Query: 765  KGFTISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEENGEINKDVTH 586
            KG  +SR+KTEYMEC FS N   NE  V+I   E+  +  F+YLGSI+++NGE++ D+ H
Sbjct: 757  KGLRLSRSKTEYMECKFSANGGQNELGVRIGDQEIPKSDRFRYLGSILQKNGELDGDLNH 816

Query: 585  RIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEHEQKMRVAEM 406
            RIQAGW KW+SAS +LCDR++PLKLKGKFY+TAIRPAMLYG ECWA K++H  KM VAEM
Sbjct: 817  RIQAGWMKWKSASGVLCDRRMPLKLKGKFYRTAIRPAMLYGTECWAVKHQHVHKMGVAEM 876

Query: 405  RMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIRETRLRWFGHVYRRPLDAPVRRLE-GR 229
            RMLRWMCGHTR D+IRNE IR KVGVA I  K+RE +LRWFGHV RRP DAP+RR + G 
Sbjct: 877  RMLRWMCGHTRKDKIRNEDIRGKVGVAEIQGKMRENQLRWFGHVQRRPTDAPIRRCDYGT 936

Query: 228  ESLTQIKRGRGRPKKTWKEAIKHDMLYLEINENMAYDRKRWRDMIRIADPT 76
            E   Q +RGRGRP+KT +E ++ D+ YL++ ++M  DR +WR  I IADPT
Sbjct: 937  E--VQGRRGRGRPRKTLEETLRKDLEYLDLTKDMTQDRAQWRSKIHIADPT 985


>gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
          Length = 1939

 Score =  513 bits (1322), Expect = e-143
 Identities = 261/469 (55%), Positives = 325/469 (69%), Gaps = 6/469 (1%)
 Frame = -3

Query: 1485 DDIPIEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGI 1306
            D+IPIE WK LGG GI+WLTKLF  IL++KKMPDEWRKS L+PIY+ KGDIQ+C NYRGI
Sbjct: 980  DNIPIEVWKGLGGKGINWLTKLFYEILRSKKMPDEWRKSTLVPIYRIKGDIQSCGNYRGI 1039

Query: 1305 KLISHTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHM 1126
            KL+SHTMKLW +                     G  T                       
Sbjct: 1040 KLMSHTMKLWGK---------------------GDRT----------------------- 1055

Query: 1125 VFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIG 946
               ++EK   R     +W+VLEKR ++IAYI AIKDMY+G TT ++T  G++ EFP  IG
Sbjct: 1056 ---EVEKRDTRYQGRFLWKVLEKRRVRIAYIRAIKDMYEGATTSVKTQGGVTEEFPIGIG 1112

Query: 945  LHQGSALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKLEVWREALES 766
            LHQGS+LSPYLF L+++ +T+H+Q+ +P CMLFADDIVL+ E+RE +N KLE+WREALE 
Sbjct: 1113 LHQGSSLSPYLFTLVLEVLTEHIQEPVPWCMLFADDIVLMGESREDLNKKLELWREALEV 1172

Query: 765  KGFTISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEENGEINKDVTH 586
             G  ISR+KTEYMEC FS    N+  +VKI  + +   KSFKYLG II++NGEI +DV H
Sbjct: 1173 YGLRISRSKTEYMECKFSLRRENSNIEVKIGENILRKVKSFKYLGCIIQDNGEIEQDVNH 1232

Query: 585  RIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEHEQKMRVAEM 406
            RIQAGW+KWRSAS  +CD+K+PLKLKGKFY+TAIRPAMLYG ECWA K EHE K+ VAEM
Sbjct: 1233 RIQAGWSKWRSASGFICDKKVPLKLKGKFYRTAIRPAMLYGTECWAAKGEHEHKLSVAEM 1292

Query: 405  RMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIRETRLRWFGHVYRRPLDAPVRRLEGRE 226
            +MLRWM GHTRLD+IRNE IR +VGVAPI EK+ E+RLRWFGHV RRP++  VRR++  E
Sbjct: 1293 KMLRWMSGHTRLDKIRNEDIRERVGVAPIVEKMVESRLRWFGHVGRRPIEHLVRRVDEME 1352

Query: 225  SLTQIKRGRGRPKKTWKEAIKHDMLYLEINENMAYDR------KRWRDM 97
               Q  +GRGRPKKT  E +K D+   E   ++   +       +WRD+
Sbjct: 1353 D-GQKAKGRGRPKKTIHEVVKRDLHETEAIHSIVLHKVYRETEGKWRDL 1400


>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
          Length = 377

 Score =  486 bits (1251), Expect = e-134
 Identities = 231/379 (60%), Positives = 295/379 (77%)
 Frame = -3

Query: 1212 MPGRSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAYI 1033
            MPGRST+EAI+L+RR+ EQY   +QDLH++FIDLEKAYDRV R+I+W+ LEK+G+++AYI
Sbjct: 1    MPGRSTMEAIYLLRRVMEQYRMAQQDLHLIFIDLEKAYDRVPREILWKALEKKGVRVAYI 60

Query: 1032 DAIKDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLFILIIDEITKHLQKSIPECM 853
             AI+DMYD ++T +RT  G S +FP TIGLHQGS LSPYLF LI+D +T+ +Q+  P CM
Sbjct: 61   RAIQDMYDRVSTSVRTQGGESDDFPITIGLHQGSTLSPYLFTLILDVLTEQIQEIAPRCM 120

Query: 852  LFADDIVLIDETREGVNAKLEVWREALESKGFTISRAKTEYMECHFSKNNRNNETKVKID 673
            LFADDIVL+ E+RE +N +LE WR ALE+ GF +SR+K+EYMEC F+K   +N ++VKI 
Sbjct: 121  LFADDIVLLGESREELNERLETWRRALETHGFRLSRSKSEYMECQFNKRRVSN-SEVKIG 179

Query: 672  GHEVSITKSFKYLGSIIEENGEINKDVTHRIQAGWNKWRSASSILCDRKIPLKLKGKFYK 493
             H +     FKYLGS+I+++GEI  DV HRIQAGW KWR AS +LCD K+P+KLKGKFY+
Sbjct: 180  DHIIPQVTRFKYLGSVIQDDGEIEGDVNHRIQAGWMKWRKASGVLCDAKVPIKLKGKFYR 239

Query: 492  TAIRPAMLYGAECWATKYEHEQKMRVAEMRMLRWMCGHTRLDRIRNEHIRNKVGVAPIDE 313
            TA+RP +LYG ECWA K +HE K+ VAEMRMLRWMCG TR D+IRNE IR +VGVAPI E
Sbjct: 240  TAVRPTILYGTECWAVKSQHENKVGVAEMRMLRWMCGKTRQDKIRNEAIRERVGVAPIVE 299

Query: 312  KIRETRLRWFGHVYRRPLDAPVRRLEGRESLTQIKRGRGRPKKTWKEAIKHDMLYLEINE 133
            K+ E RLRWFGHV RRP+D+ +RR++  E   Q  RGRGRPKKT +E IK D+    ++ 
Sbjct: 300  KMVENRLRWFGHVERRPVDSVLRRVDQMER-RQTIRGRGRPKKTIREVIKKDLEINGLDR 358

Query: 132  NMAYDRKRWRDMIRIADPT 76
            +M  DR  WR +I +ADPT
Sbjct: 359  SMVLDRTLWRKLIHVADPT 377


>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
            truncatula]
          Length = 517

 Score =  482 bits (1241), Expect = e-133
 Identities = 220/354 (62%), Positives = 281/354 (79%)
 Frame = -3

Query: 1485 DDIPIEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGI 1306
            D+IPIE WK LG  G  WL  LFN I++TKKM DEWR+S LIPI KNKGDIQNCANYRGI
Sbjct: 163  DNIPIEVWKSLGDRGTVWLANLFNEIIRTKKMSDEWRRSTLIPIDKNKGDIQNCANYRGI 222

Query: 1305 KLISHTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHM 1126
            KL+SHTMKLWERVI+ R+R ET + DNQFGFM GRST+EAI+L++R+ E+Y   K+DLH+
Sbjct: 223  KLMSHTMKLWERVIKRRLRKETLVTDNQFGFMLGRSTMEAIYLLQRVMERYRTDKKDLHL 282

Query: 1125 VFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIG 946
            VF DLEK YDRV R+I+W+ LEK+ ++IAYI AIKDMY+  +T ++T  G + +FP TIG
Sbjct: 283  VFFDLEKGYDRVPREILWKALEKKRVRIAYIRAIKDMYERASTSVKTQDGTTEDFPITIG 342

Query: 945  LHQGSALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKLEVWREALES 766
            LHQGS L+PYLF L++D +T+H+Q+  P CMLFADD+VL+ E+RE VN +LE WR+ALE+
Sbjct: 343  LHQGSTLTPYLFTLVLDVLTEHIQELAPRCMLFADDVVLVGESREEVNGRLETWRQALEA 402

Query: 765  KGFTISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEENGEINKDVTH 586
             GF +SR+KT+YMEC+FS     +  +VK+  H +     FKYLGS ++ +GEI  DV+H
Sbjct: 403  YGFRLSRSKTKYMECNFSGRRSRSTLEVKVGDHIIPQVTRFKYLGSFVQNDGEIEADVSH 462

Query: 585  RIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEHEQK 424
            RIQAGW KWR ASS+LCD+K+PLKL GKFY+TA+RPA+LYG ECWA K +HE +
Sbjct: 463  RIQAGWLKWRRASSVLCDKKVPLKLTGKFYRTAVRPALLYGTECWAVKSQHENQ 516


>emb|CDJ92648.1| RNA-directed DNA polymerase (reverse transcriptase) domain containing
            protein [Haemonchus contortus]
          Length = 479

 Score =  460 bits (1183), Expect = e-127
 Identities = 218/469 (46%), Positives = 304/469 (64%)
 Frame = -3

Query: 1485 DDIPIEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGI 1306
            D +PIEAWK LG  G+ WLT+  N +    ++PD WRKS ++PI+K KGD   C+NYRGI
Sbjct: 13   DGVPIEAWKALGEYGVKWLTRFLNTVTAEGRIPDAWRKSTIVPIFKQKGDAMECSNYRGI 72

Query: 1305 KLISHTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHM 1126
            +L +HTMKL+ER++++R+R    I   QFGFMP RST +AI + R++ E+Y E+++  ++
Sbjct: 73   RLTTHTMKLYERLVDSRLRELVPISQKQFGFMPERSTTDAIFIARQVMEKYREKRRPCYI 132

Query: 1125 VFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIG 946
             F+DLEKA+DR+ R ++WR L KR +    I  +KDMYDG TT IRTP G +     T+G
Sbjct: 133  AFLDLEKAFDRLPRQVLWRALRKRKVPEHLISLVKDMYDGSTTTIRTPHGQTGAIDVTVG 192

Query: 945  LHQGSALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKLEVWREALES 766
            +HQGSALSP+LF+L +D IT+ L     + +L+ADDI LI E+++ +  KL+ W+  L  
Sbjct: 193  VHQGSALSPFLFLLTMDVITEELMDGPLKTILYADDIALIAESKDELQDKLQNWQRVLAE 252

Query: 765  KGFTISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEENGEINKDVTH 586
             G  ++  KT+++      +    E+ V   G  +   + F+YLGS +  +G +++ V  
Sbjct: 253  SGLRLNVKKTKFL-----SSEEGTESIVDGRGEAIEKVQDFRYLGSDLAADGSVDQAVKS 307

Query: 585  RIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEHEQKMRVAEM 406
            RI A W KWR ++ ILCDR+    LKGK Y+T +RP MLYG+ECW     HE ++  AEM
Sbjct: 308  RINAAWMKWRESTGILCDRRCSRTLKGKVYRTVVRPTMLYGSECWPVSKSHEGQLHSAEM 367

Query: 405  RMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIRETRLRWFGHVYRRPLDAPVRRLEGRE 226
            RMLRW CG TRLDR+RNE +R  +  API  K+RE RLRWFGHV RRP   P+R  E  E
Sbjct: 368  RMLRWACGWTRLDRVRNEDVRTAMQTAPIQLKMREQRLRWFGHVLRRPQSHPIR--EAME 425

Query: 225  SLTQIKRGRGRPKKTWKEAIKHDMLYLEINENMAYDRKRWRDMIRIADP 79
               Q KR RG PKK W++ IK D+   ++    A DR +WR + R ADP
Sbjct: 426  FEAQGKRPRGAPKKRWRDVIKKDLAETKVTAEDAVDRMKWRRLTRTADP 474


>ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840703 [Brachypodium
            distachyon]
          Length = 567

 Score =  452 bits (1164), Expect = e-124
 Identities = 218/381 (57%), Positives = 285/381 (74%), Gaps = 6/381 (1%)
 Frame = -3

Query: 1203 RSTI--EAIHLIRRL--CEQYNERKQDLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAY 1036
            RSTI  E I ++ +    E+Y E+K+DLHMVFIDLEKAYD++ R++MW  LEK  +   Y
Sbjct: 189  RSTIISELIFMLDKAGDLERYKEQKKDLHMVFIDLEKAYDKIPRNVMWWALEKHKVPAKY 248

Query: 1035 IDAIKDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLFILIIDEITKHLQKSIPEC 856
            I  IKDMYD + T +RT  G + +FP  IGLHQGSALSPYLF L++DE+T+ +Q  IP C
Sbjct: 249  ITLIKDMYDNVVTSVRTSDGDTDDFPIKIGLHQGSALSPYLFDLVMDEVTRDIQGDIPWC 308

Query: 855  MLFADDIVLIDETREGVNAKLEVWREALESKGFTISRAKTEYMECHFSKNN-RNNETKVK 679
            MLFADD+VL+D++R GVN KLE+WR+ LESKGF +SR KTEYM+C FS       E +V 
Sbjct: 309  MLFADDVVLVDDSRTGVNRKLELWRQILESKGFRLSRTKTEYMKCGFSTTTPEEEEEEVS 368

Query: 678  IDGHEVSITKSFKYLGSIIEENGEINKDVTHRIQAGWNKWRSASSILCDRKIPLKLKGKF 499
            +DG  V    +F+YLGS+++++G+I++DV HRI+AGW KWR AS ILCD+++P KLKGKF
Sbjct: 369  LDGQVVPQKDTFRYLGSMLQKDGDIDEDVNHRIKAGWMKWRQASGILCDKRVPQKLKGKF 428

Query: 498  YKTAIRPAMLYGAECWATKYEHEQKMRVAEMRMLRWMCGHTRLDRIRNEHIRNKVGVAPI 319
            Y+TAIRPA+LYGAECW TK  H Q++ VAEMRMLRWMCGHTR DR+RN+ IR++VGVAPI
Sbjct: 429  YRTAIRPAILYGAECWPTKRRHVQQLGVAEMRMLRWMCGHTRRDRVRNDDIRDRVGVAPI 488

Query: 318  DEKIRETRLRWFGHVYRRPLDAPVRRLEGR-ESLTQIKRGRGRPKKTWKEAIKHDMLYLE 142
             EK+ + RLRWFGH+ RRPLDAPV    GR +    +KRGRGRP  TW+E++K D+    
Sbjct: 489  AEKLVQHRLRWFGHIQRRPLDAPVH--SGRLKRAGNVKRGRGRPNLTWEESVKRDLKGWN 546

Query: 141  INENMAYDRKRWRDMIRIADP 79
            I + +A +R  W+  I + +P
Sbjct: 547  ITKELAMNRAAWKLAIHVPEP 567


>emb|CBA11992.1| endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene]
          Length = 990

 Score =  450 bits (1157), Expect = e-124
 Identities = 219/472 (46%), Positives = 309/472 (65%), Gaps = 3/472 (0%)
 Frame = -3

Query: 1485 DDIPIEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGI 1306
            DDIPIEAWK LG +G+  LT LFN IL T KMP +WR S + PIYK +G +Q+C +YRGI
Sbjct: 524  DDIPIEAWKSLGSLGVLMLTDLFNHILNTGKMPHQWRLSFITPIYKGRGSVQDCGSYRGI 583

Query: 1305 KLISHTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHM 1126
            KL+SHTMKL+ER+I+ R+R E ++ ++Q+GF PG  T++AI  +R L E Y E+++ LH+
Sbjct: 584  KLMSHTMKLFERMIDLRLRRECTVSESQYGFQPGSGTMDAIFALRTLMEAYREKRRALHV 643

Query: 1125 VFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIG 946
             F+DL+KA+D V R  +W  L  +GI  AYI+ I+ MY    + +RT  G +  FP T+G
Sbjct: 644  AFLDLQKAFDCVPRQCIWWALRSKGIPEAYIEIIRGMYHDSASMVRTAVGDTRPFPITVG 703

Query: 945  LHQGSALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKLEVWREALES 766
            +HQGSALSP+LF +++D ++ H+Q   P  M++ADDI LI E R  +  K+ +W+  LE+
Sbjct: 704  VHQGSALSPFLFNVVLDTVSAHIQDQPPWLMMYADDIALIAENRLTLERKVNLWKGTLEN 763

Query: 765  KGFTISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEENGEINKDVTH 586
             G  ++ +KTEYM C     +R++ T + I       ++ F+YLGS++ E+G I+ DV  
Sbjct: 764  GGLKLNVSKTEYMAC----GSRDSST-ILIGPEPAVKSEKFRYLGSVMHESGGIDHDVHG 818

Query: 585  RIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEHEQKMRVAEM 406
            RI A W KWR  + ++CDR+IP KLKG  YK+ +RP +LYG+ECW     H Q++ V EM
Sbjct: 819  RISAAWAKWREVTGVVCDRRIPPKLKGLIYKSIVRPVLLYGSECWPALSRHTQELHVTEM 878

Query: 405  RMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIRETRLRWFGHVYRRPLDAPVRRLEGRE 226
            +MLRWMCG TR DRIRN  IR  +GV  + +K++E RLRWFGHV RRP     +   GR+
Sbjct: 879  KMLRWMCGVTRSDRIRNTFIRGSLGVRDVADKLQERRLRWFGHVTRRP-----KNYVGRK 933

Query: 225  SLTQIKRGR---GRPKKTWKEAIKHDMLYLEINENMAYDRKRWRDMIRIADP 79
             L  +  G    GRP+K W + +  DM    +    A DR +W  + R ADP
Sbjct: 934  CLAILVPGARPPGRPRKRWLDVVMQDMRANGLTTEDAKDRAKWSRLSRKADP 985


>gb|EHJ75084.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
          Length = 472

 Score =  449 bits (1154), Expect = e-123
 Identities = 218/472 (46%), Positives = 306/472 (64%), Gaps = 3/472 (0%)
 Frame = -3

Query: 1485 DDIPIEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGI 1306
            DDIPIEAWK LG +G+  LT LFN +L T  MP +WR S + PIYK +G +Q+C +YRG+
Sbjct: 10   DDIPIEAWKSLGSLGVLILTDLFNRVLNTGTMPHQWRYSYITPIYKGRGSVQDCGSYRGV 69

Query: 1305 KLISHTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHM 1126
            K++SHTMKL+ER+I+ R+R E ++ + Q+GF PG  T++AI  IR L E Y E+++ LH+
Sbjct: 70   KIMSHTMKLFERMIDLRLRRECTVSECQYGFQPGSGTLDAIFAIRTLMEAYREKRRALHV 129

Query: 1125 VFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIG 946
             F+DL+KA+D V R  +W  L  +GI  AYID I+DMY    + +RT  G +  FP ++G
Sbjct: 130  AFLDLQKAFDCVPRQCIWWALRFKGIPEAYIDIIRDMYRDSVSMVRTAVGDTKPFPISVG 189

Query: 945  LHQGSALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKLEVWREALES 766
            LHQGSALSP+LF +++D ++ ++Q   P  M++ADDI LIDE+R  +  ++ +W+  LE+
Sbjct: 190  LHQGSALSPFLFNVVLDTVSANIQDQPPWLMMYADDIALIDESRLTLERRVNLWKGTLEN 249

Query: 765  KGFTISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEENGEINKDVTH 586
             G  ++  KTEYM C        +   + I       ++ F+YLGSI+ E+G I+ DV  
Sbjct: 250  GGLKLNVTKTEYMAC-----GSPDSCTIHIGPEPAVKSEKFRYLGSILHESGGIDHDVQA 304

Query: 585  RIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEHEQKMRVAEM 406
            RI A W KWR  + ++CDR+IP KLKG  YK+ IRP +LYG+ECW T   H Q++ V EM
Sbjct: 305  RISAAWAKWRDVTGVVCDRRIPTKLKGIIYKSIIRPVLLYGSECWPTLSRHTQELHVTEM 364

Query: 405  RMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIRETRLRWFGHVYRRPLDAPVRRLEGRE 226
            +MLRWMCG TR DRIRN  IR  +GV  + +K++E+RLRW+GHV RRP         G+ 
Sbjct: 365  KMLRWMCGVTRADRIRNTFIRGSLGVRDVADKLQESRLRWYGHVARRP-----ENYVGKI 419

Query: 225  SLTQIKRGR---GRPKKTWKEAIKHDMLYLEINENMAYDRKRWRDMIRIADP 79
             L     G    GRP+K W + +K DM    +    A DR +WR + R ADP
Sbjct: 420  CLDMSVPGARPPGRPRKRWLDTVKQDMRANGLTTADAKDRAKWRSLSRKADP 471


>gb|EHJ64905.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
          Length = 985

 Score =  449 bits (1154), Expect = e-123
 Identities = 218/472 (46%), Positives = 306/472 (64%), Gaps = 3/472 (0%)
 Frame = -3

Query: 1485 DDIPIEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGI 1306
            DDIPIEAWK LG +G+  LT LFN +L T  MP +WR S + PIYK +G +Q+C +YRG+
Sbjct: 523  DDIPIEAWKSLGSLGVLILTDLFNRVLNTGTMPHQWRYSYITPIYKGRGSVQDCGSYRGV 582

Query: 1305 KLISHTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHM 1126
            K++SHTMKL+ER+I+ R+R E ++ + Q+GF PG  T++AI  IR L E Y E+++ LH+
Sbjct: 583  KIMSHTMKLFERMIDLRLRRECTVSECQYGFQPGSGTLDAIFAIRTLMEAYREKRRALHV 642

Query: 1125 VFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIG 946
             F+DL+KA+D V R  +W  L  +GI  AYID I+DMY    + +RT  G +  FP ++G
Sbjct: 643  AFLDLQKAFDCVPRQCIWWALRFKGIPEAYIDIIRDMYRDSVSMVRTAVGDTKPFPISVG 702

Query: 945  LHQGSALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKLEVWREALES 766
            LHQGSALSP+LF +++D ++ ++Q   P  M++ADDI LIDE+R  +  ++ +W+  LE+
Sbjct: 703  LHQGSALSPFLFNVVLDTVSANIQDQPPWLMMYADDIALIDESRLTLERRVNLWKGTLEN 762

Query: 765  KGFTISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEENGEINKDVTH 586
             G  ++  KTEYM C        +   + I       ++ F+YLGSI+ E+G I+ DV  
Sbjct: 763  GGLKLNVTKTEYMAC-----GSPDSCTIHIGPEPAVKSEKFRYLGSILHESGGIDHDVQA 817

Query: 585  RIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEHEQKMRVAEM 406
            RI A W KWR  + ++CDR+IP KLKG  YK+ IRP +LYG+ECW T   H Q++ V EM
Sbjct: 818  RISAAWAKWREVTGVVCDRRIPTKLKGIIYKSIIRPVLLYGSECWPTLSRHTQELHVTEM 877

Query: 405  RMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIRETRLRWFGHVYRRPLDAPVRRLEGRE 226
            +MLRWMCG TR DRIRN  IR  +GV  + +K++E+RLRW+GHV RRP         G+ 
Sbjct: 878  KMLRWMCGVTRADRIRNTFIRGSLGVRDVADKLQESRLRWYGHVARRP-----ENYVGKI 932

Query: 225  SLTQIKRGR---GRPKKTWKEAIKHDMLYLEINENMAYDRKRWRDMIRIADP 79
             L     G    GRP+K W + +K DM    +    A DR +WR + R ADP
Sbjct: 933  CLDMSVPGARPPGRPRKRWLDTVKQDMRANGLTTADAKDRAKWRSLSRKADP 984


>gb|EHJ65195.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
          Length = 1253

 Score =  441 bits (1135), Expect = e-121
 Identities = 214/464 (46%), Positives = 301/464 (64%), Gaps = 3/464 (0%)
 Frame = -3

Query: 1485 DDIPIEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGI 1306
            DDIPIEAWK LG +G+  LT LFN +L T  MP +WR S + PIYK +G +Q+C +YRG+
Sbjct: 791  DDIPIEAWKSLGSLGVLILTDLFNRVLNTGTMPHQWRYSYITPIYKGRGSVQDCGSYRGV 850

Query: 1305 KLISHTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHM 1126
            K++SHTMKL+ER+I+ R+R E ++ + Q+GF PG  T++AI  IR L E Y E+++ LH+
Sbjct: 851  KIMSHTMKLFERMIDLRLRRECTVSECQYGFQPGSGTLDAIFAIRTLMEAYREKRRALHV 910

Query: 1125 VFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIG 946
             F+DL+KA+D V R  +W  L  +GI  AYID I+DMY    + +RT  G +  FP ++G
Sbjct: 911  AFLDLQKAFDCVPRQCIWWALRFKGIPEAYIDIIRDMYRDSVSMVRTAVGDTKPFPISVG 970

Query: 945  LHQGSALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKLEVWREALES 766
            LHQGSALSP+LF +++D ++ ++Q   P  M++ADDI LIDE+R  +  ++ +W+  LE+
Sbjct: 971  LHQGSALSPFLFNVVLDTVSANIQDQPPWLMMYADDIALIDESRLTLERRVNLWKGTLEN 1030

Query: 765  KGFTISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEENGEINKDVTH 586
             G  ++  KTEYM C        +   + I       ++ F+YLGSI+ E+G I+ DV  
Sbjct: 1031 GGLKLNVTKTEYMAC-----GSPDSCTIHIGPEPAVKSEKFRYLGSILHESGGIDHDVQA 1085

Query: 585  RIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEHEQKMRVAEM 406
            RI A W KWR  + ++CDR+IP KLKG  YK+ IRP +LYG+ECW T   H Q++ V EM
Sbjct: 1086 RISAAWAKWRDVTGVVCDRRIPTKLKGIIYKSIIRPVLLYGSECWPTLSRHTQELHVTEM 1145

Query: 405  RMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIRETRLRWFGHVYRRPLDAPVRRLEGRE 226
            +MLRWMCG TR DRIRN  IR  +GV  + +K++E+RLRW+GHV RRP         G+ 
Sbjct: 1146 KMLRWMCGVTRADRIRNTFIRGSLGVRDVADKLQESRLRWYGHVARRP-----ENYVGKI 1200

Query: 225  SLTQIKRGR---GRPKKTWKEAIKHDMLYLEINENMAYDRKRWR 103
             L     G    GRP+K W + +K DM    +    A DR +WR
Sbjct: 1201 CLDMSVPGARPPGRPRKRWLDTVKQDMRANGLTTADAKDRAKWR 1244


>emb|CDJ90320.1| RNA-directed DNA polymerase (reverse transcriptase) domain containing
            protein [Haemonchus contortus]
          Length = 1526

 Score =  430 bits (1106), Expect = e-118
 Identities = 204/444 (45%), Positives = 287/444 (64%)
 Frame = -3

Query: 1485 DDIPIEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGI 1306
            D +PI+AWK LG  G+ WLT+  N +    ++PD WR+S ++PI+K KGD  +C+NYRGI
Sbjct: 552  DGVPIKAWKALGEHGVKWLTRFLNTVTAKGRIPDAWRRSTIVPIFKQKGDAMDCSNYRGI 611

Query: 1305 KLISHTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHM 1126
            +L +HTMKL+ER++++R+R    I + QFGFMPGRST +AI + R++  +Y E+++  ++
Sbjct: 612  RLAAHTMKLYERLVDSRLRELVPISEKQFGFMPGRSTTDAIFITRQVMGKYREKRRPCYI 671

Query: 1125 VFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIG 946
             F+DLEKA+DR+ R ++WR L KR +    I  +KDMYDG TT IRTP G +     T+G
Sbjct: 672  AFLDLEKAFDRLPRQVLWRALRKRKVPEHLISLVKDMYDGSTTTIRTPHGQTGAIDVTVG 731

Query: 945  LHQGSALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKLEVWREALES 766
            +HQGSALSP+LF+L +D IT+ L     + +L+ADDI LI E+++ +  KL+ W+  L  
Sbjct: 732  VHQGSALSPFLFLLTMDVITEELMDGPLKTILYADDIALIAESKDELQDKLQNWQRVLAE 791

Query: 765  KGFTISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEENGEINKDVTH 586
             G  ++  K +++           E+ V   G  +   + F+YLGS +  +G +++ V  
Sbjct: 792  SGLRLNVKKAKFL-----SPEEGTESVVDGRGEAIEKVQDFRYLGSDLAADGSVDQAVKS 846

Query: 585  RIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEHEQKMRVAEM 406
            RI A W KWR ++ ILCD +    LKGK Y+T +RP MLYG+ECW     HE ++  AEM
Sbjct: 847  RISAAWMKWRESTGILCDSRCSRTLKGKVYRTVVRPTMLYGSECWPVSKSHEGQLHSAEM 906

Query: 405  RMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIRETRLRWFGHVYRRPLDAPVRRLEGRE 226
            RMLRW CG TRLDR RNE +R  +  API  K R  RLRWFGHV RRP   P+R  E  E
Sbjct: 907  RMLRWACGWTRLDRARNEDVRTAMQTAPIQMKTRGQRLRWFGHVLRRPQSHPIR--EAME 964

Query: 225  SLTQIKRGRGRPKKTWKEAIKHDM 154
               Q KR RG PKK W++ IK D+
Sbjct: 965  FEAQGKRPRGAPKKRWRDVIKKDL 988


>gb|ADI61822.1| endonuclease-reverse transcriptase [Bombyx mori]
          Length = 996

 Score =  429 bits (1103), Expect = e-117
 Identities = 209/479 (43%), Positives = 306/479 (63%), Gaps = 6/479 (1%)
 Frame = -3

Query: 1485 DDIPIEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGI 1306
            D IP+EAWKCL   GI  LTKLFN +L++ KMP  WR S ++PIYK KG    C+NYRGI
Sbjct: 526  DGIPVEAWKCLREHGIETLTKLFNCVLRSSKMPAAWRLSTIVPIYKGKGSKYECSNYRGI 585

Query: 1305 KLISHTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHM 1126
            KL+SHTMKL+ERVI++R+R+E S+  N +GF+ G ST + +  +  + E+Y E+ + L++
Sbjct: 586  KLLSHTMKLYERVIDSRLRSECSLSKNHYGFVQGLSTTDPMFALNTIAEEYREKLRPLYV 645

Query: 1125 VFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIG 946
             F+D+EKA+DRV RD +W  L K+ +   Y++ I DMY    + +RT  G +       G
Sbjct: 646  AFLDMEKAFDRVPRDTIWWSLRKKNVPEHYVNVIIDMYRDARSMVRTVVGQTKPIAVAEG 705

Query: 945  LHQGSALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKLEVWREALES 766
            LHQGS LSP+LF ++ID +T+  Q S     ++ADD+ +  E+R  +   L +W++ L++
Sbjct: 706  LHQGSVLSPFLFGMVIDSLTEVAQSSASWTFIYADDVAICTESRTKLREALLLWKQQLQA 765

Query: 765  KGFTISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEENGEINKDVTH 586
             G  +S AKT YM   F+  +  + + + IDG  V++   +KYLG+++  +G +  ++ H
Sbjct: 766  GGLILSVAKTHYMS--FNDPDPGDNSPISIDGQLVNMCDQYKYLGTMMHRSGNLKCNIQH 823

Query: 585  RIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEHEQKMRVAEM 406
            RI A W KWR  S + CDR++P+KLKG  YKT IRP ++YG+E WA    +   ++VAEM
Sbjct: 824  RIAAAWLKWREVSGVTCDRRMPVKLKGMIYKTIIRPVLMYGSETWAATKRNVHTIQVAEM 883

Query: 405  RMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIRETRLRWFGHVYRRPLD-----APVRR 241
            +MLRWMCG TRLD+IRNE++R  +GV  I +K++E+RLRW+GHV R+  D     A +  
Sbjct: 884  KMLRWMCGVTRLDKIRNEYVRGSLGVRDIADKMQESRLRWYGHVKRKQPDYVGNLALLLD 943

Query: 240  LEGRESLTQIKRGRGRPKKTWKEAIKHDMLYLEINENMAYDRKRWRDMIRIADP-T*WD 67
            L GR       R RGRPK  W++ +  D     + +    DR +WR  +R ADP T WD
Sbjct: 944  LPGR-------RPRGRPKTRWRDVVLKDKRECNVADEDVEDRAKWRSKVRKADPTTMWD 995


>gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Triticum urartu]
          Length = 882

 Score =  424 bits (1090), Expect = e-116
 Identities = 204/348 (58%), Positives = 261/348 (75%), Gaps = 2/348 (0%)
 Frame = -3

Query: 1146 RKQDLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISS 967
            R +DLHMVFIDLEKAYD++ R++MW  LEK  +   YI  IKDMYD + T +RT    + 
Sbjct: 162  RNKDLHMVFIDLEKAYDKIPRNVMWWALEKHKVPAKYITLIKDMYDNVVTSVRTSDVDTD 221

Query: 966  EFPNTIGLHQGSALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKLEV 787
            +FP  IGLHQGSALSPYLF L++DE+T+ +Q  IP CMLFADD+VL+D++R GVN KLE+
Sbjct: 222  DFPIKIGLHQGSALSPYLFALVMDEVTRDIQGDIPWCMLFADDVVLVDDSRTGVNRKLEL 281

Query: 786  WREALESKGFTISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEENGE 607
            WR+ LESKGF +SR KTEYM C FS   R  E +V +DG  V    +F YLGS+++E+G 
Sbjct: 282  WRQTLESKGFRLSRTKTEYMMCGFS-TTRCEEEEVSLDGQVVPRKDTFWYLGSLLQEDGG 340

Query: 606  INKDVTHRIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEHEQ 427
            I++DV HRI+AGW KWR AS ILCD+++P KLKGKFY+T +RPAMLYGAECW TK  H Q
Sbjct: 341  IDEDVNHRIKAGWMKWRQASGILCDKRVPQKLKGKFYRTVVRPAMLYGAECWPTKRRHVQ 400

Query: 426  KMRVAEMRMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIRETRLRWFGHVYRRPLDAPV 247
            ++ VAEM MLR MCGHTR DR+RN+ IR++VGVAPI+EK+ + RLRWFGH+  RP +APV
Sbjct: 401  QLDVAEMCMLRCMCGHTRKDRVRNDDIRDRVGVAPIEEKLVQHRLRWFGHIQHRPPEAPV 460

Query: 246  R--RLEGRESLTQIKRGRGRPKKTWKEAIKHDMLYLEINENMAYDRKR 109
               RL+  E+   +KRGRGRP  TW+E++K D+    I + +A DR R
Sbjct: 461  HSGRLKRAEN---VKRGRGRPNLTWEESVKRDLKDWSITKELAMDRGR 505


>emb|CDJ93835.1| RNA-directed DNA polymerase (reverse transcriptase) domain containing
            protein [Haemonchus contortus]
          Length = 480

 Score =  419 bits (1077), Expect = e-114
 Identities = 199/469 (42%), Positives = 306/469 (65%)
 Frame = -3

Query: 1485 DDIPIEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGI 1306
            DD+  + WK  G     WLT+ FN ++  KK+P+ W++S  IPI+K KG + +C  YR I
Sbjct: 10   DDVAADLWKSKGWNPAGWLTEFFNQVVAEKKVPESWQQSTTIPIWKKKGSLGDCTCYRPI 69

Query: 1305 KLISHTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHM 1126
            +L+SH+MK++ER++++RIR+   +  NQ GF+   STI+AIH  R L E++ E+++ +H+
Sbjct: 70   RLLSHSMKIFERIVDSRIRDIVELTTNQCGFVAACSTIDAIHAARLLLEKHREKRRPVHL 129

Query: 1125 VFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIG 946
             F+DLEKA+DRV RD++W  L + G+    I+ ++ +Y    + ++T  G S+EFP ++G
Sbjct: 130  AFLDLEKAFDRVPRDVIWYALRQHGVPEELIEWVRILYTSPKSRVQTAAGTSAEFPISVG 189

Query: 945  LHQGSALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKLEVWREALES 766
            +HQGSALSP LF++++D ITK LQK  P  +L+ADD++L  E +  + ++++ W + L  
Sbjct: 190  VHQGSALSPLLFVVVMDTITKDLQKPAPWTLLYADDVMLASEDKSELESQVQTWSDRLAM 249

Query: 765  KGFTISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEENGEINKDVTH 586
             G  ++  KTEY+    S+        +KI+G E++ T +FKYLGS I  +G +  +   
Sbjct: 250  FGLRLNVKKTEYLTTDSSEPG-----SIKINGTELTRTTTFKYLGSAIASDGSLGFETNS 304

Query: 585  RIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEHEQKMRVAEM 406
            R+ A W KWRS + +LCD+ IP +LK K Y+T IRP  +YGAECW    E E ++ V E 
Sbjct: 305  RVNAAWLKWRSMTGVLCDKNIPERLKSKIYRTVIRPVAIYGAECWPATKEVEARLSVMET 364

Query: 405  RMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIRETRLRWFGHVYRRPLDAPVRRLEGRE 226
            +MLRW  G TRLDRI N+ IR + GVAPI +K+RE RLRW+GH  R   D+ VR++    
Sbjct: 365  KMLRWTAGVTRLDRISNDAIRERFGVAPIVDKMREARLRWYGHTLRAKNDS-VRKISLNL 423

Query: 225  SLTQIKRGRGRPKKTWKEAIKHDMLYLEINENMAYDRKRWRDMIRIADP 79
             ++  KR RGRPK+ W + +  D+  + I+ + A++R++WR  IR ADP
Sbjct: 424  DVSG-KRPRGRPKQRWLDTLHEDLKAVNIHPDQAFNREKWRQHIRKADP 471


>emb|CDJ94991.1| RNA-directed DNA polymerase (reverse transcriptase) domain containing
            protein [Haemonchus contortus]
          Length = 478

 Score =  414 bits (1063), Expect = e-113
 Identities = 198/469 (42%), Positives = 303/469 (64%)
 Frame = -3

Query: 1485 DDIPIEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGI 1306
            DD+  + WK  G     WLT+ FN ++  +K+P+ W++S  IPI+K KG   +C  YR I
Sbjct: 10   DDLAADLWKSKGWNPAGWLTEFFNQVVAERKVPESWQQSTTIPIWKKKGSPGDCTCYRPI 69

Query: 1305 KLISHTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHM 1126
            +L+SH+MK++ER++++RIR+   +  NQ GF+ G STI+AIH  R L E++ E+++ +H+
Sbjct: 70   RLLSHSMKIFERIVDSRIRDIVELTTNQCGFVAGCSTIDAIHATRLLLEKHREKRRPIHL 129

Query: 1125 VFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIG 946
             F+DLEKA+DRV RD++W  L + G+    I+ ++ +Y    + ++T  G S+EFP ++G
Sbjct: 130  AFLDLEKAFDRVPRDVIWYALRQHGVPEELIEWVRILYTSPKSRVQTAAGTSAEFPISVG 189

Query: 945  LHQGSALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKLEVWREALES 766
            +HQGSALSP LF++++D ITK LQK  P  +L+ADD++L  E +  + ++++ W + L  
Sbjct: 190  VHQGSALSPLLFVVVMDAITKDLQKPAPWTLLYADDVMLASEDKSELESQVQTWSDRLAM 249

Query: 765  KGFTISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEENGEINKDVTH 586
             G  ++  KTEY+    S+        +KI+G E++ T +FKYLGS I  +G +  +   
Sbjct: 250  FGLRLNVKKTEYLTTDSSEPG-----SIKINGTELTRTTTFKYLGSAIASDGSLGFETNS 304

Query: 585  RIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEHEQKMRVAEM 406
            R+ A W KWRS + +LCD+ IP  LK K Y+T IRP  +YG+ECW      E ++ V E 
Sbjct: 305  RVNAAWLKWRSMTGVLCDKNIPECLKSKIYRTVIRPVAIYGSECWPATKAVEARLSVMET 364

Query: 405  RMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIRETRLRWFGHVYRRPLDAPVRRLEGRE 226
            +MLRW  G TRLDRI N+ IR + GVAPI +K+RE RLRW+GH  R   D+ VR++ G  
Sbjct: 365  KMLRWTAGVTRLDRISNDAIRERFGVAPIVDKMREARLRWYGHTLRAKNDS-VRKI-GLN 422

Query: 225  SLTQIKRGRGRPKKTWKEAIKHDMLYLEINENMAYDRKRWRDMIRIADP 79
                 KR RGRPK+ W + +  D+  + I+ + A++R++WR  IR ADP
Sbjct: 423  LEVSGKRPRGRPKQRWLDTLHEDLKAVNIHPDQAFNREKWRQHIRKADP 471


>gb|EMT14674.1| Methyltransferase-like protein 13 [Aegilops tauschii]
          Length = 1134

 Score =  407 bits (1046), Expect = e-111
 Identities = 202/364 (55%), Positives = 259/364 (71%)
 Frame = -3

Query: 1485 DDIPIEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGI 1306
            D IPIE WK LG + I WLTKLFN+I +  KMP+EWR+SIL+PI+KNKGD+Q C NYRGI
Sbjct: 334  DCIPIEVWKGLGDIAIVWLTKLFNLIFRANKMPEEWRRSILVPIFKNKGDVQICTNYRGI 393

Query: 1305 KLISHTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHM 1126
            KL+SHTMKLWERVIE R+R  TS+  NQFGFMPGRST+EAI L+R+L  +Y E+K+DLHM
Sbjct: 394  KLMSHTMKLWERVIEHRLRRMTSVTKNQFGFMPGRSTMEAIFLVRQLMVRYREQKKDLHM 453

Query: 1125 VFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIG 946
            VFIDLEKAY+++ R++ W  L+K  +   YI  IKDMYD   T +RT    + +FP  IG
Sbjct: 454  VFIDLEKAYNKIPRNLWW-ALDKHKVPAKYITLIKDMYDNAVTSVRTSDIDTDDFPIKIG 512

Query: 945  LHQGSALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKLEVWREALES 766
            LHQGSALSPYLF L++DE+T+ +Q  IP CMLFADD+VL+D++R GVN KLE+WR+ LES
Sbjct: 513  LHQGSALSPYLFALLMDEVTRDIQGDIPWCMLFADDVVLVDDSRTGVNRKLELWRQTLES 572

Query: 765  KGFTISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEENGEINKDVTH 586
            KG  +SR KTEYM C FS      E +V +DG  V    +F+YLGS+++E+G I++DV H
Sbjct: 573  KGLRLSRTKTEYMMCGFS--TTRCEEEVSLDGQVVPQKDTFRYLGSMLQEDGGIDEDVNH 630

Query: 585  RIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEHEQKMRVAEM 406
            RI+AGW KWR AS ILCD     K K +  +     + +  A+ W    E  Q + V   
Sbjct: 631  RIKAGWMKWRQASGILCDES-ATKAKRQVLQDGCSTSNVARAQEWLFASEEGQWLVVESA 689

Query: 405  RMLR 394
            +  R
Sbjct: 690  KAAR 693


>ref|XP_006010506.1| PREDICTED: uncharacterized protein LOC102366231 [Latimeria chalumnae]
          Length = 1500

 Score =  404 bits (1037), Expect = e-110
 Identities = 199/398 (50%), Positives = 271/398 (68%)
 Frame = -3

Query: 1485 DDIPIEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGI 1306
            D++PIE +K +  +G+  LT+L+  I +  KMP EWR+S L+P++K KGD+Q+C NYRGI
Sbjct: 382  DEVPIETFKEMKEMGLVVLTRLYRAIWEEGKMPTEWRESTLVPVFKRKGDVQDCNNYRGI 441

Query: 1305 KLISHTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHM 1126
             L+SH MKLWER+IE R+R    I +NQFGF  GRSTI+AI  ++ L E+Y E+++DLHM
Sbjct: 442  ALMSHAMKLWERIIEKRLRKLVQISENQFGFCQGRSTIDAIFALKILMEKYKEKRKDLHM 501

Query: 1125 VFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIG 946
            VF+DLEKAYDRV R ++W  + KRGI   YI  +KDMY G    +R+  G ++ FP  +G
Sbjct: 502  VFVDLEKAYDRVPRGLIWWCMRKRGIPEVYIRLVKDMYQGSKIWVRSACGTTTSFPVKVG 561

Query: 945  LHQGSALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKLEVWREALES 766
            + QGSALSP+LFIL++D +TK +QK  P CMLFADDI+L  E+RE V   LE W + +E 
Sbjct: 562  VRQGSALSPFLFILVLDTLTKDIQKEPPWCMLFADDIMLCAESREEVEKDLERWVQCMEE 621

Query: 765  KGFTISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEENGEINKDVTH 586
            +G  +SR  T YM   FS+ +   E+ +KI   ++  T+ FKYLGSII  +G +  ++  
Sbjct: 622  RGLKMSRMMTGYMVAKFSEGSDEMES-MKIGEKKLRRTEEFKYLGSIISTDGFLAGEIRA 680

Query: 585  RIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEHEQKMRVAEM 406
            R  AGW KWR  S ++CD  IP  LKGK YK  IR A+++ AECW  + + EQ M V EM
Sbjct: 681  RTTAGWVKWREVSGVICDNGIPAWLKGKVYKNVIRQALVFRAECWCIRKKEEQDMSVTEM 740

Query: 405  RMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIRETRL 292
            RMLRWM G  R D+I+NE IR ++ V  + E +RE RL
Sbjct: 741  RMLRWMLGMMRTDKIKNEEIRKRLKVTQVVE-MREKRL 777


>gb|EHJ71530.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
          Length = 601

 Score =  402 bits (1033), Expect = e-109
 Identities = 195/439 (44%), Positives = 282/439 (64%), Gaps = 3/439 (0%)
 Frame = -3

Query: 1392 MPDEWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWERVIEARIRNETSILDNQFGF 1213
            MP +WR S + PIYK +G +Q+C +YRG+K++SHTMKL+ER+I+ R+R E ++ + Q+GF
Sbjct: 1    MPHQWRYSYITPIYKGRGSVQDCGSYRGVKIMSHTMKLFERMIDLRLRRECTVSECQYGF 60

Query: 1212 MPGRSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAYI 1033
             PG  T++AI  IR L E Y E+++ LH+ F+DL+KA+D V R  +W  L  +GI  AYI
Sbjct: 61   QPGSGTLDAIFAIRTLMEAYREKRRALHVAFLDLQKAFDCVPRQCIWWALRFKGIPEAYI 120

Query: 1032 DAIKDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLFILIIDEITKHLQKSIPECM 853
            D I+DMY    + +RT  G +  FP ++GLHQGSALSP+LF +++D ++ ++Q   P  M
Sbjct: 121  DIIRDMYRDSVSMVRTAVGDTKPFPISVGLHQGSALSPFLFNVVLDTVSANIQDQPPWLM 180

Query: 852  LFADDIVLIDETREGVNAKLEVWREALESKGFTISRAKTEYMECHFSKNNRNNETKVKID 673
            ++ADDI LIDE+R  +  ++ +W+  LE+ G  ++  KTEYM C        +   + I 
Sbjct: 181  MYADDIALIDESRLTLERRVNLWKGTLENGGLKLNVTKTEYMAC-----GSPDSCTIHIG 235

Query: 672  GHEVSITKSFKYLGSIIEENGEINKDVTHRIQAGWNKWRSASSILCDRKIPLKLKGKFYK 493
                  ++ F+YLGSI+ E+G I+ DV  RI A W KWR  + ++CDR+IP KLKG  YK
Sbjct: 236  PEPAVKSEKFRYLGSILHESGGIDHDVQARISAAWAKWRDVTGVVCDRRIPTKLKGIIYK 295

Query: 492  TAIRPAMLYGAECWATKYEHEQKMRVAEMRMLRWMCGHTRLDRIRNEHIRNKVGVAPIDE 313
            + IRP +LYG+ECW T   H Q++ V EM+MLRWMCG TR DRIRN  IR  +GV  + +
Sbjct: 296  SIIRPVLLYGSECWPTLSRHTQELHVTEMKMLRWMCGVTRADRIRNTFIRGSLGVRDVAD 355

Query: 312  KIRETRLRWFGHVYRRPLDAPVRRLEGRESLTQIKRGR---GRPKKTWKEAIKHDMLYLE 142
            K++E+RLRW+GHV RRP         G+  L     G    GRP+K W + +K DM    
Sbjct: 356  KLQESRLRWYGHVARRP-----ENYVGKICLDMSVPGARPPGRPRKRWLDTVKQDMRANG 410

Query: 141  INENMAYDRKRWRDMIRIA 85
            +    A DR ++  ++R A
Sbjct: 411  LTTADAKDRAKYERLLRRA 429