BLASTX nr result
ID: Rehmannia25_contig00000576
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00000576
(2402 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymeras... 1203 0.0
ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 1197 0.0
ref|XP_004242994.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 1194 0.0
sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymeras... 1187 0.0
gb|EPS64933.1| hypothetical protein M569_09836 [Genlisea aurea] 1174 0.0
emb|CBI36559.3| unnamed protein product [Vitis vinifera] 1160 0.0
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 1160 0.0
ref|XP_002325119.1| DNA-directed RNA polymerase family protein [... 1143 0.0
gb|EMJ04424.1| hypothetical protein PRUPE_ppa000868mg [Prunus pe... 1142 0.0
gb|EOY31496.1| DNA/RNA polymerases superfamily protein isoform 1... 1140 0.0
ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Popu... 1138 0.0
gb|EOY31497.1| DNA/RNA polymerases superfamily protein isoform 2... 1136 0.0
ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 1135 0.0
ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 1130 0.0
ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citr... 1114 0.0
ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 1110 0.0
ref|XP_004144791.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 1110 0.0
emb|CAC80139.1| DNA-dependent RNA polymerase [Spinacia oleracea] 1085 0.0
ref|NP_179989.1| DNA-directed RNA polymerase 3 [Arabidopsis thal... 1080 0.0
ref|XP_006296121.1| hypothetical protein CARUB_v10025273mg [Caps... 1080 0.0
>sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymerase 3, chloroplastic; AltName:
Full=NsRpoT-C; AltName: Full=T7 bacteriophage-type single
subunit RNA polymerase 3; Flags: Precursor
gi|59800203|sp|P69243.1|RPO3A_TOBAC RecName:
Full=DNA-directed RNA polymerase 3A, chloroplastic;
AltName: Full=NictaRpoT3-syl; AltName: Full=T7
bacteriophage-type single subunit RNA polymerase 3A;
Flags: Precursor gi|21425641|emb|CAC82576.3| phage-type
RNA polymerase [Nicotiana sylvestris]
gi|21425679|emb|CAC95027.2| plastid RNA polymerase
[Nicotiana tabacum] gi|24475541|dbj|BAC22693.1| T7
bacteriophage-type single subunit RNA polymerase
[Nicotiana sylvestris] gi|24475543|dbj|BAC22694.1| T7
bacteriophage-type single subunit RNA polymerase
[Nicotiana sylvestris]
Length = 977
Score = 1203 bits (3113), Expect = 0.0
Identities = 583/700 (83%), Positives = 645/700 (92%)
Frame = +2
Query: 2 TKKHQRMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKL 181
TKK Q+ GA+SQED +E ILRKRVKSLIKRNRV+EV+KL++SEE +SWGRDTQAKL
Sbjct: 272 TKKLQKHMTGAQSQEDMSRETMILRKRVKSLIKRNRVVEVRKLMKSEEPESWGRDTQAKL 331
Query: 182 GCCLIQLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLV 361
GC L++LLT++AYVQPPV+QSAD+PPD+RPAFRH+F+IATR+ G+S+VKKYGVIECDPLV
Sbjct: 332 GCRLLELLTETAYVQPPVDQSADTPPDIRPAFRHVFRIATRDPGKSIVKKYGVIECDPLV 391
Query: 362 LAGLDKTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQ 541
+AG+D+TVK M+IPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSR+QQDAV++VPTKQ
Sbjct: 392 VAGVDRTVKQMMIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRRQQDAVRSVPTKQ 451
Query: 542 MQKVYEALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPELLSDDXXXXXX 721
MQ+VYEALDTLG+TKWRVNKRILSVVESIWA GGN+AGLV+R+DVPIPEL SDD
Sbjct: 452 MQQVYEALDTLGSTKWRVNKRILSVVESIWAGGGNIAGLVDRKDVPIPELHSDDIMEVKK 511
Query: 722 XXXXXXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHL 901
INQE HSQRCDTELKLSVARK+KDEEGFYYPHNLDFRGRAYPMHPHLNHL
Sbjct: 512 WKWRVRKSKKINQELHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLNHL 571
Query: 902 SSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSA 1081
SSDLCRGILEFAEGRPLGKSGLRWLKIHLA+LY GG+EKL YD R++FVEN+I +I DSA
Sbjct: 572 SSDLCRGILEFAEGRPLGKSGLRWLKIHLASLYAGGIEKLCYDARLAFVENHIDDILDSA 631
Query: 1082 DNSLNGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALG 1261
+N LNGNRWWL AEDPFQCLAACINLSEAL+SSSPHTV SHLPIHQDGSCNGLQHYAALG
Sbjct: 632 NNPLNGNRWWLNAEDPFQCLAACINLSEALKSSSPHTVFSHLPIHQDGSCNGLQHYAALG 691
Query: 1262 RDSFEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKL 1441
RDS EAAAVNL+AGDKPADVY+EIA RV +I++ DS KDPATDP+ALLAKLLI QVDRKL
Sbjct: 692 RDSMEAAAVNLVAGDKPADVYTEIALRVDHIIRGDSIKDPATDPNALLAKLLIDQVDRKL 751
Query: 1442 VKQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAAR 1621
VKQTVMTSVYGVTYVGAREQIKRRLEEKGLI DDRLLF+A+CYAAKVTLAALGELFQAAR
Sbjct: 752 VKQTVMTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTLAALGELFQAAR 811
Query: 1622 AIMGWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEV 1801
M WLGDCAK+IASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGD+VEV
Sbjct: 812 GTMTWLGDCAKVIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDTVEV 871
Query: 1802 RKQRTAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKFV 1981
RKQRTAFPPNFVHSLDGSHMMMTA+ACRD GL+FAGVHDSFWTHACDVD+MN+ILR+KFV
Sbjct: 872 RKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLQFAGVHDSFWTHACDVDQMNRILREKFV 931
Query: 1982 DLYNMPILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2101
+LY+MPILE LLESF+ SYP LTFPPLP RGDFDL +V++
Sbjct: 932 ELYSMPILEDLLESFQNSYPALTFPPLPKRGDFDLVEVLE 971
>ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Solanum
tuberosum]
Length = 1015
Score = 1197 bits (3096), Expect = 0.0
Identities = 577/700 (82%), Positives = 640/700 (91%)
Frame = +2
Query: 2 TKKHQRMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKL 181
TKKHQ+ GA+ QED +E ILRKRVKSLIKRNRV+EV+KL++SEE +SWGRDTQAKL
Sbjct: 310 TKKHQKHMSGAQGQEDMSRETMILRKRVKSLIKRNRVVEVRKLMQSEEPESWGRDTQAKL 369
Query: 182 GCCLIQLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLV 361
GC L++LLT++AYVQPPV+QSAD+PPD+RPAFRH+F+IATR+ G+++VKKYGVIECDPLV
Sbjct: 370 GCRLLELLTETAYVQPPVDQSADTPPDIRPAFRHVFRIATRDPGKNIVKKYGVIECDPLV 429
Query: 362 LAGLDKTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQ 541
+ G+D+TVK M+IPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSR+QQDAV++VP KQ
Sbjct: 430 VVGVDRTVKQMMIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRRQQDAVRSVPAKQ 489
Query: 542 MQKVYEALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPELLSDDXXXXXX 721
MQ+VYEALDTLG+TKWRVNKRILSVVESIWA GGN+AGLV+R+DVPIPEL SDD
Sbjct: 490 MQQVYEALDTLGSTKWRVNKRILSVVESIWAGGGNIAGLVDRKDVPIPELHSDDIMELKR 549
Query: 722 XXXXXXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHL 901
INQE HSQRCDTELKLSVARK+KDEEGFYYPHNLDFRGRAYPMHPHLNHL
Sbjct: 550 WKWRVRKAKKINQELHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLNHL 609
Query: 902 SSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSA 1081
SSDLCRGILEFAEGRPLGKSGLRWLK+HLA+LY GG+EKL YD RI+FVEN+I +I DSA
Sbjct: 610 SSDLCRGILEFAEGRPLGKSGLRWLKVHLASLYAGGIEKLCYDARIAFVENHIDDILDSA 669
Query: 1082 DNSLNGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALG 1261
N LNGNRWWL AEDP QCLAACINLSEAL+S SPHTV+SHLPIHQDGSCNGLQHYAALG
Sbjct: 670 HNPLNGNRWWLNAEDPLQCLAACINLSEALKSPSPHTVISHLPIHQDGSCNGLQHYAALG 729
Query: 1262 RDSFEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKL 1441
RDS EAAAVNL+AG+KPADVY+EIA RV +I++ DS KDPATDP+ALLAKLLI QVDRKL
Sbjct: 730 RDSMEAAAVNLVAGEKPADVYTEIALRVDHIIRGDSTKDPATDPNALLAKLLIDQVDRKL 789
Query: 1442 VKQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAAR 1621
VKQTVMTSVYGVTYVGAREQIKRRLEEKGLI DDRLLF+A+CYAAKVTLAALGELFQAAR
Sbjct: 790 VKQTVMTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTLAALGELFQAAR 849
Query: 1622 AIMGWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEV 1801
M WLGDCAK+IASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGD+VEV
Sbjct: 850 GTMTWLGDCAKVIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDAVEV 909
Query: 1802 RKQRTAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKFV 1981
RKQRTAFPPNFVHSLDGSHMMMTA+ACRD GL FAGVHDSFWTHACDVD+MN+ILR+KFV
Sbjct: 910 RKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDQMNRILREKFV 969
Query: 1982 DLYNMPILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2101
+LY+MPILE LLESF+ SYP LTFPPLP RGDFDL +V++
Sbjct: 970 ELYSMPILEDLLESFQESYPALTFPPLPKRGDFDLQEVLE 1009
>ref|XP_004242994.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Solanum
lycopersicum]
Length = 1007
Score = 1194 bits (3088), Expect = 0.0
Identities = 574/700 (82%), Positives = 640/700 (91%)
Frame = +2
Query: 2 TKKHQRMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKL 181
TKKHQ+ GA+ QED +E ILRKRVKSLIKRNRV+EV+KL++SEE +SWGRDTQAKL
Sbjct: 302 TKKHQKHMTGAQGQEDMSRETMILRKRVKSLIKRNRVVEVRKLMQSEEPESWGRDTQAKL 361
Query: 182 GCCLIQLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLV 361
GC L++LLT++AYVQPPV+QSAD+PPD+RPAFRH+F+IATR+ G+++VKKYGVIECDPLV
Sbjct: 362 GCRLLELLTETAYVQPPVDQSADTPPDIRPAFRHVFRIATRDPGKNIVKKYGVIECDPLV 421
Query: 362 LAGLDKTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQ 541
+ G+D+TVK M+IPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSR+QQDAV++VP KQ
Sbjct: 422 VVGVDRTVKQMMIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRRQQDAVRSVPAKQ 481
Query: 542 MQKVYEALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPELLSDDXXXXXX 721
MQ+VYEALDTLG+TKWRVNKRILSVVE+IWA GGN+AGLV+R+DVPIPEL SDD
Sbjct: 482 MQQVYEALDTLGSTKWRVNKRILSVVETIWAGGGNIAGLVDRKDVPIPELHSDDIMELKR 541
Query: 722 XXXXXXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHL 901
INQE HSQRCDTELKLSVARK++DEEGFYYPHNLDFRGRAYPMHPHLNHL
Sbjct: 542 WKWRVRKAKKINQELHSQRCDTELKLSVARKLRDEEGFYYPHNLDFRGRAYPMHPHLNHL 601
Query: 902 SSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSA 1081
SSDLCRGILEFAEGRPLGKSGLRWLK+HLA+LY GG+EKL YD RI+FVEN+I +I DSA
Sbjct: 602 SSDLCRGILEFAEGRPLGKSGLRWLKVHLASLYAGGIEKLCYDARIAFVENHIDDILDSA 661
Query: 1082 DNSLNGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALG 1261
N LNGNRWWL AEDP QCLAACINLSEA++S SPHTV+SHLPIHQDGSCNGLQHYAALG
Sbjct: 662 HNPLNGNRWWLNAEDPLQCLAACINLSEAVKSLSPHTVISHLPIHQDGSCNGLQHYAALG 721
Query: 1262 RDSFEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKL 1441
RDS EAAAVNL+AG+KPADVY+EIA RV +I++ DS KDPATDP+ALLAKLLI QVDRKL
Sbjct: 722 RDSMEAAAVNLVAGEKPADVYTEIALRVDHIIRGDSTKDPATDPNALLAKLLIDQVDRKL 781
Query: 1442 VKQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAAR 1621
VKQTVMTSVYGVTYVGAREQIKRRLEEKGLI DDRLLF+A+CYAAKVTLAALGELFQAAR
Sbjct: 782 VKQTVMTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTLAALGELFQAAR 841
Query: 1622 AIMGWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEV 1801
M WLGDCAK+IASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGD+VEV
Sbjct: 842 GTMTWLGDCAKVIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDAVEV 901
Query: 1802 RKQRTAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKFV 1981
RKQRTAFPPNFVHSLDGSHMMMTA+ACRD GL FAGVHDSFWTHACDVD+MN+ILR+KFV
Sbjct: 902 RKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDQMNRILREKFV 961
Query: 1982 DLYNMPILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2101
+LY+MPILE LLESF+ SYP LTFPPLP RGDFDL +V++
Sbjct: 962 ELYSMPILEDLLESFQESYPALTFPPLPKRGDFDLREVLE 1001
>sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymerase 3B, chloroplastic; AltName:
Full=NictaRpoT3-tom; AltName: Full=T7 bacteriophage-type
single subunit RNA polymerase 3B; Flags: Precursor
gi|21425667|emb|CAC95021.2| chloroplast RNA polymerase
[Nicotiana tabacum]
Length = 977
Score = 1187 bits (3071), Expect = 0.0
Identities = 576/701 (82%), Positives = 642/701 (91%), Gaps = 1/701 (0%)
Frame = +2
Query: 2 TKKHQRMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKL 181
TKK Q+ GA+SQED KE ILRKRVKSLIKRNRV+EV+KL++SEE +SWGRDTQAKL
Sbjct: 271 TKKLQKHMTGAQSQEDMSKETMILRKRVKSLIKRNRVVEVRKLMKSEEPESWGRDTQAKL 330
Query: 182 GCCLIQLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLV 361
GC L++LLT++AYVQ PV+QSAD+PPD+RPAFRH+FKIATR+ G+++VKKYGVIECDPLV
Sbjct: 331 GCRLLELLTETAYVQRPVDQSADTPPDIRPAFRHVFKIATRDPGKNIVKKYGVIECDPLV 390
Query: 362 LAGLDKTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQ 541
+AG+D+TVK M+IPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSR+QQDAV+ VPTKQ
Sbjct: 391 VAGVDRTVKQMMIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRRQQDAVRGVPTKQ 450
Query: 542 MQKVYEALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPELL-SDDXXXXX 718
MQ+VYEALDTLG+TKWRVNKRIL+VVESIWA GGN+AGLV+R+DVPIPEL SDD
Sbjct: 451 MQQVYEALDTLGSTKWRVNKRILNVVESIWAGGGNIAGLVDRKDVPIPELSNSDDIMEVK 510
Query: 719 XXXXXXXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNH 898
INQE HSQRCDTELKLSVARK+KDEEGFYYPHNLDFRGRAYPMHPHLNH
Sbjct: 511 KWKWKVRKSKKINQELHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLNH 570
Query: 899 LSSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDS 1078
LSSDLCRGILEFAEGRPLGKSGLRWLKIHLA+LY GGVEKL YD R++FVEN+I +I DS
Sbjct: 571 LSSDLCRGILEFAEGRPLGKSGLRWLKIHLASLYAGGVEKLCYDARLAFVENHIHDILDS 630
Query: 1079 ADNSLNGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAAL 1258
A+N LNGNRWWL AEDPFQCLAACINLSEAL+SSSPHTV+SHLPIHQDGSCNGLQHYAAL
Sbjct: 631 ANNPLNGNRWWLNAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAAL 690
Query: 1259 GRDSFEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRK 1438
GRDS EAAAVNL+AG+KPADVY+EIA RV +I++ DS KDPA DP+ALLAKLLI QVDRK
Sbjct: 691 GRDSMEAAAVNLVAGEKPADVYTEIALRVDHIIRGDSIKDPAIDPNALLAKLLIDQVDRK 750
Query: 1439 LVKQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAA 1618
LVKQTVMTSVYGVTYVGAREQIKRRLEEKGLI DDRLLF+A+CYAAKVTLAALGELFQAA
Sbjct: 751 LVKQTVMTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTLAALGELFQAA 810
Query: 1619 RAIMGWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVE 1798
R M WLGDCAK+IA ENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQ+LALQREGD+VE
Sbjct: 811 RGTMTWLGDCAKVIALENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQILALQREGDAVE 870
Query: 1799 VRKQRTAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKF 1978
VRKQRTAFPPNFVHSLDGSHMMMTA+ACRD GL+FAGVHDSFWTHACDVD+MN+ILR+KF
Sbjct: 871 VRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLQFAGVHDSFWTHACDVDQMNRILREKF 930
Query: 1979 VDLYNMPILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2101
V+LY++PILE LLE+F+ SYP LTFPPLP RGDF+L +V++
Sbjct: 931 VELYSLPILEDLLENFQKSYPALTFPPLPKRGDFNLREVLE 971
>gb|EPS64933.1| hypothetical protein M569_09836 [Genlisea aurea]
Length = 952
Score = 1174 bits (3038), Expect = 0.0
Identities = 566/697 (81%), Positives = 627/697 (89%)
Frame = +2
Query: 8 KHQRMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGC 187
KHQ+ V +ESQE+S ++AA LRKRVK+L++R R +EVQKLV+SE + W R+ QAKLGC
Sbjct: 249 KHQKEAVASESQENSCEKAANLRKRVKNLVRRGRGVEVQKLVKSENHEPWTREIQAKLGC 308
Query: 188 CLIQLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLA 367
CLI LLTQSAYVQPPV+QSADSPPDVRPAFRH FKIATRE Q++V++YGVIECDPL+L
Sbjct: 309 CLINLLTQSAYVQPPVSQSADSPPDVRPAFRHFFKIATREPRQTVVRRYGVIECDPLILD 368
Query: 368 GLDKTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQ 547
G + VKHM++P++PML+PPKKW+GYDKGGYLFLPSY+MRTHGSR+QQDAVK V ++MQ
Sbjct: 369 GFESNVKHMMVPHIPMLIPPKKWKGYDKGGYLFLPSYVMRTHGSRRQQDAVKTVSPRKMQ 428
Query: 548 KVYEALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPELLSDDXXXXXXXX 727
KV+EALDTLGNTKWRVNK ILSVVE IWAAGGN+AGLVNREDVP+PEL SDD
Sbjct: 429 KVFEALDTLGNTKWRVNKSILSVVEDIWAAGGNIAGLVNREDVPLPELHSDDPIEIKKWK 488
Query: 728 XXXXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSS 907
N E HS RCDTELKLSVAR MKDEEGFYYPHN+DFRGRAYPMHPHLNHLSS
Sbjct: 489 FSIRKAKKNNMEMHSLRCDTELKLSVARAMKDEEGFYYPHNVDFRGRAYPMHPHLNHLSS 548
Query: 908 DLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADN 1087
DLCRGILEF+EGRPLGKSGL WLK+HLANL+GGGV+KL YD R+SFVEN I E+FDSADN
Sbjct: 549 DLCRGILEFSEGRPLGKSGLYWLKLHLANLFGGGVQKLPYDERLSFVENNITEVFDSADN 608
Query: 1088 SLNGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRD 1267
L+GNRWWLKAEDPFQ LAACIN+SEALRSSSPHTV+SHLPIHQDGSCNGLQHYAALGRD
Sbjct: 609 PLSGNRWWLKAEDPFQFLAACINISEALRSSSPHTVISHLPIHQDGSCNGLQHYAALGRD 668
Query: 1268 SFEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVK 1447
SFEAAAVNL+AG KP DVYSEIAERV +IMK DSEKDPA DP+A+LAKLLIGQVDRKLVK
Sbjct: 669 SFEAAAVNLVAGHKPTDVYSEIAERVLDIMKSDSEKDPADDPNAVLAKLLIGQVDRKLVK 728
Query: 1448 QTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAI 1627
QTVMTSVYGVTYVGAREQI++RL EKG I DD++LF AACYAAKVT+AALG+LFQAARAI
Sbjct: 729 QTVMTSVYGVTYVGAREQIRKRLAEKGFINDDKVLFMAACYAAKVTMAALGQLFQAARAI 788
Query: 1628 MGWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRK 1807
M WLGDCAKIIASENQPVRWTTPLGLPVVQPYFKT+RHVIRTSLQVLALQREGDSVEVRK
Sbjct: 789 MSWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTKRHVIRTSLQVLALQREGDSVEVRK 848
Query: 1808 QRTAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKFVDL 1987
Q+TAFPPNFVHSLDGSHMMMTA+ACRD GLRFAGVHDSFWTHACDVD+MNQILR+KFVDL
Sbjct: 849 QKTAFPPNFVHSLDGSHMMMTAVACRDAGLRFAGVHDSFWTHACDVDKMNQILREKFVDL 908
Query: 1988 YNMPILESLLESFETSYPTLTFPPLPNRGDFDLNKVV 2098
Y+MPILE LLESF++SYPTL FPPLP RGDFDL V+
Sbjct: 909 YSMPILEDLLESFQSSYPTLRFPPLPKRGDFDLRNVL 945
>emb|CBI36559.3| unnamed protein product [Vitis vinifera]
Length = 808
Score = 1160 bits (3000), Expect = 0.0
Identities = 558/701 (79%), Positives = 630/701 (89%), Gaps = 1/701 (0%)
Frame = +2
Query: 2 TKKHQRMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKL 181
TK +R + SQE ++E ILRKRVKS I++ ++IEVQKLV++EE WGRDTQAKL
Sbjct: 103 TKNFERHKTVGHSQE-GLREKEILRKRVKSFIRKKKIIEVQKLVKNEEITPWGRDTQAKL 161
Query: 182 GCCLIQLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLV 361
G LI+LLT++AYVQ PVNQSAD PPDVRPAFRH FK T+ESGQ +KYGVIECDPLV
Sbjct: 162 GSRLIELLTETAYVQTPVNQSADCPPDVRPAFRHTFKTVTKESGQKDWRKYGVIECDPLV 221
Query: 362 LAGLDKTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQ 541
L GLD+T KHM+IPYVPML+PPKKW+GYDKGGYLFLPSY+MRTHGSR+QQDAVK+VP +Q
Sbjct: 222 LIGLDRTAKHMVIPYVPMLIPPKKWKGYDKGGYLFLPSYVMRTHGSRKQQDAVKSVPRRQ 281
Query: 542 MQKVYEALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPELLS-DDXXXXX 718
+QKV+EALDTLGNTKWR+N+R+LSVVESIWA GGNL GLV+RE+VP+PE S +D
Sbjct: 282 LQKVFEALDTLGNTKWRINRRVLSVVESIWARGGNLGGLVDRENVPLPEKPSTEDLTEIQ 341
Query: 719 XXXXXXXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNH 898
INQERHS RCDTE+KLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNH
Sbjct: 342 NWKWNARKAKKINQERHSLRCDTEIKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNH 401
Query: 899 LSSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDS 1078
LSSDLCRG+LEFAEGRPLGKSGLRWLKI LANLY GGVEKLSYDGR++FV+N++ ++FDS
Sbjct: 402 LSSDLCRGVLEFAEGRPLGKSGLRWLKIQLANLYAGGVEKLSYDGRLAFVDNHLDDVFDS 461
Query: 1079 ADNSLNGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAAL 1258
ADN LNGNRWWL AEDPFQCLAACINLSEALRSSSPHTV+SHLPIHQDGSCNGLQHYAAL
Sbjct: 462 ADNPLNGNRWWLTAEDPFQCLAACINLSEALRSSSPHTVISHLPIHQDGSCNGLQHYAAL 521
Query: 1259 GRDSFEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRK 1438
GR+S EA+AVNL+AG+KPADVYSEIA RVH IMKRDS KDPATDP ALLAK+LIGQVDRK
Sbjct: 522 GRNSLEASAVNLVAGEKPADVYSEIAARVHEIMKRDSNKDPATDPKALLAKVLIGQVDRK 581
Query: 1439 LVKQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAA 1618
LVKQTVMTSVYGVTY+GAREQIKRRL EKGLITD+RLLF+AACYAAKVTLAALGE+FQAA
Sbjct: 582 LVKQTVMTSVYGVTYIGAREQIKRRLAEKGLITDERLLFTAACYAAKVTLAALGEIFQAA 641
Query: 1619 RAIMGWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVE 1798
R IM WLG+CAK+IASENQPV+WTTPLGLPV+QPY K++RH+IRTSLQVLALQREG V
Sbjct: 642 RDIMAWLGECAKVIASENQPVQWTTPLGLPVIQPYCKSERHLIRTSLQVLALQREGSVVV 701
Query: 1799 VRKQRTAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKF 1978
+RKQRTAFPPNFVHSLDGSHMMMTA+ACRD GL FAGVHDSFWTHACDVD+MNQILR+KF
Sbjct: 702 IRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLCFAGVHDSFWTHACDVDKMNQILREKF 761
Query: 1979 VDLYNMPILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2101
V+LY+MPILE+LLESF+TS+PTLTFPPLP+RG+FDL +V++
Sbjct: 762 VELYSMPILENLLESFQTSHPTLTFPPLPDRGNFDLREVLE 802
>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
vinifera]
Length = 979
Score = 1160 bits (3000), Expect = 0.0
Identities = 558/701 (79%), Positives = 630/701 (89%), Gaps = 1/701 (0%)
Frame = +2
Query: 2 TKKHQRMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKL 181
TK +R + SQE ++E ILRKRVKS I++ ++IEVQKLV++EE WGRDTQAKL
Sbjct: 274 TKNFERHKTVGHSQE-GLREKEILRKRVKSFIRKKKIIEVQKLVKNEEITPWGRDTQAKL 332
Query: 182 GCCLIQLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLV 361
G LI+LLT++AYVQ PVNQSAD PPDVRPAFRH FK T+ESGQ +KYGVIECDPLV
Sbjct: 333 GSRLIELLTETAYVQTPVNQSADCPPDVRPAFRHTFKTVTKESGQKDWRKYGVIECDPLV 392
Query: 362 LAGLDKTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQ 541
L GLD+T KHM+IPYVPML+PPKKW+GYDKGGYLFLPSY+MRTHGSR+QQDAVK+VP +Q
Sbjct: 393 LIGLDRTAKHMVIPYVPMLIPPKKWKGYDKGGYLFLPSYVMRTHGSRKQQDAVKSVPRRQ 452
Query: 542 MQKVYEALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPELLS-DDXXXXX 718
+QKV+EALDTLGNTKWR+N+R+LSVVESIWA GGNL GLV+RE+VP+PE S +D
Sbjct: 453 LQKVFEALDTLGNTKWRINRRVLSVVESIWARGGNLGGLVDRENVPLPEKPSTEDLTEIQ 512
Query: 719 XXXXXXXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNH 898
INQERHS RCDTE+KLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNH
Sbjct: 513 NWKWNARKAKKINQERHSLRCDTEIKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNH 572
Query: 899 LSSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDS 1078
LSSDLCRG+LEFAEGRPLGKSGLRWLKI LANLY GGVEKLSYDGR++FV+N++ ++FDS
Sbjct: 573 LSSDLCRGVLEFAEGRPLGKSGLRWLKIQLANLYAGGVEKLSYDGRLAFVDNHLDDVFDS 632
Query: 1079 ADNSLNGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAAL 1258
ADN LNGNRWWL AEDPFQCLAACINLSEALRSSSPHTV+SHLPIHQDGSCNGLQHYAAL
Sbjct: 633 ADNPLNGNRWWLTAEDPFQCLAACINLSEALRSSSPHTVISHLPIHQDGSCNGLQHYAAL 692
Query: 1259 GRDSFEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRK 1438
GR+S EA+AVNL+AG+KPADVYSEIA RVH IMKRDS KDPATDP ALLAK+LIGQVDRK
Sbjct: 693 GRNSLEASAVNLVAGEKPADVYSEIAARVHEIMKRDSNKDPATDPKALLAKVLIGQVDRK 752
Query: 1439 LVKQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAA 1618
LVKQTVMTSVYGVTY+GAREQIKRRL EKGLITD+RLLF+AACYAAKVTLAALGE+FQAA
Sbjct: 753 LVKQTVMTSVYGVTYIGAREQIKRRLAEKGLITDERLLFTAACYAAKVTLAALGEIFQAA 812
Query: 1619 RAIMGWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVE 1798
R IM WLG+CAK+IASENQPV+WTTPLGLPV+QPY K++RH+IRTSLQVLALQREG V
Sbjct: 813 RDIMAWLGECAKVIASENQPVQWTTPLGLPVIQPYCKSERHLIRTSLQVLALQREGSVVV 872
Query: 1799 VRKQRTAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKF 1978
+RKQRTAFPPNFVHSLDGSHMMMTA+ACRD GL FAGVHDSFWTHACDVD+MNQILR+KF
Sbjct: 873 IRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLCFAGVHDSFWTHACDVDKMNQILREKF 932
Query: 1979 VDLYNMPILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2101
V+LY+MPILE+LLESF+TS+PTLTFPPLP+RG+FDL +V++
Sbjct: 933 VELYSMPILENLLESFQTSHPTLTFPPLPDRGNFDLREVLE 973
>ref|XP_002325119.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|222866553|gb|EEF03684.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 882
Score = 1143 bits (2957), Expect = 0.0
Identities = 553/701 (78%), Positives = 617/701 (88%), Gaps = 1/701 (0%)
Frame = +2
Query: 2 TKKHQRMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKL 181
TK +QR + E QE KE +LRKRV SLI+R R++EVQ LV+ +E K W R TQAKL
Sbjct: 176 TKNYQRKKTMHEVQETMDKEKEVLRKRVNSLIRRKRLMEVQNLVKQDETKPWSRGTQAKL 235
Query: 182 GCCLIQLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLV 361
G LI+LLT++AYVQPPVNQS D PPDVRPAFRHIFK T+ GQ +VKKYGVIECDPL+
Sbjct: 236 GSRLIELLTETAYVQPPVNQSEDIPPDVRPAFRHIFKTLTKNPGQKIVKKYGVIECDPLI 295
Query: 362 LAGLDKTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQ 541
L GLD T KHM+IPY PMLVPPKKW+GYDKGG+LFLPSY+MRTHGSRQQQ AV++VP KQ
Sbjct: 296 LTGLDGTAKHMLIPYFPMLVPPKKWKGYDKGGHLFLPSYVMRTHGSRQQQVAVRSVPGKQ 355
Query: 542 MQKVYEALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPEL-LSDDXXXXX 718
MQKV+EALDTLGNTKWRVN+R+L VVE IW +GGN+AGLV+RED+PIPE SDD
Sbjct: 356 MQKVFEALDTLGNTKWRVNRRLLDVVERIWTSGGNIAGLVDREDIPIPEKPSSDDLTEIQ 415
Query: 719 XXXXXXXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNH 898
INQERHSQRCDTELKLSVARK+KDEEGFYYPHNLDFRGRAYPMHPHL H
Sbjct: 416 KWKWSVRKAKKINQERHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLTH 475
Query: 899 LSSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDS 1078
LSSDLCRG+LEF EGRPLGKSGLRWLKIHLANLY GGVEKLS+DGR++FVEN+++EIFDS
Sbjct: 476 LSSDLCRGVLEFEEGRPLGKSGLRWLKIHLANLYSGGVEKLSHDGRLAFVENHLSEIFDS 535
Query: 1079 ADNSLNGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAAL 1258
A N +NG RWWLKAEDPFQCLAACINLSEAL S+SPHTV+SHLPIHQDGSCNGLQHYAAL
Sbjct: 536 AKNPVNGKRWWLKAEDPFQCLAACINLSEALNSASPHTVISHLPIHQDGSCNGLQHYAAL 595
Query: 1259 GRDSFEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRK 1438
GRD+ EAAAVNL+A +KP+DVYSEIA RVH I++RDS KDPAT+P ALLAK+L+ QVDRK
Sbjct: 596 GRDTLEAAAVNLVAAEKPSDVYSEIAVRVHEIIRRDSNKDPATNPHALLAKILVDQVDRK 655
Query: 1439 LVKQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAA 1618
LVKQTVMTSVYGVTYVGAREQIKRRLEEKG ITDDRLLFSAACY AKVTL ALGELFQAA
Sbjct: 656 LVKQTVMTSVYGVTYVGAREQIKRRLEEKGHITDDRLLFSAACYTAKVTLTALGELFQAA 715
Query: 1619 RAIMGWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVE 1798
R IM WLGDCAKIIASE+QPV+WTTPLGLPVVQPY+KT+RH+I+TSLQ+LALQREG SV+
Sbjct: 716 RDIMSWLGDCAKIIASEDQPVQWTTPLGLPVVQPYYKTERHLIKTSLQILALQREGSSVQ 775
Query: 1799 VRKQRTAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKF 1978
VRKQRTAFPPNFVHSLDGSHMMMTA+ACRD GL FAGVHDSFWTHA DVD MN+ILR+KF
Sbjct: 776 VRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLCFAGVHDSFWTHATDVDLMNRILREKF 835
Query: 1979 VDLYNMPILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2101
V+LYNMPILE+LLE F+TSYPTL FPPLP RG+FDL KV++
Sbjct: 836 VELYNMPILENLLEDFQTSYPTLQFPPLPERGNFDLQKVLR 876
>gb|EMJ04424.1| hypothetical protein PRUPE_ppa000868mg [Prunus persica]
Length = 976
Score = 1142 bits (2955), Expect = 0.0
Identities = 550/701 (78%), Positives = 615/701 (87%), Gaps = 1/701 (0%)
Frame = +2
Query: 2 TKKHQRMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKL 181
TK Q+ + G ++ KE ILRKRV LI+R R+ EVQKL+ EE K WGRD QAKL
Sbjct: 270 TKNLQKKKTGVADEDGLSKEKEILRKRVNGLIRRKRLNEVQKLLIKEEMKPWGRDKQAKL 329
Query: 182 GCCLIQLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLV 361
G LI+LLT++AYVQPP++Q ADSPPDVRPAFRH FK + GQ +VK YGVIECDPLV
Sbjct: 330 GSRLIELLTETAYVQPPLSQLADSPPDVRPAFRHRFKAVAKSPGQKIVKNYGVIECDPLV 389
Query: 362 LAGLDKTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQ 541
L GLDKT KHM+IPYVPMLVPPK+W+GYDKGG+LFLPSY+MRTHGSR+Q DA++ + Q
Sbjct: 390 LTGLDKTAKHMLIPYVPMLVPPKRWKGYDKGGHLFLPSYVMRTHGSRKQVDAMRNISRNQ 449
Query: 542 MQKVYEALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPELL-SDDXXXXX 718
MQKV+EALD LG+TKWRVNK++LSVVESIWA GGN+AGLVNREDVP+P+ S+D
Sbjct: 450 MQKVFEALDMLGSTKWRVNKKVLSVVESIWARGGNIAGLVNREDVPVPDKSPSEDLKEIQ 509
Query: 719 XXXXXXXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNH 898
INQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNH
Sbjct: 510 EWKWSVRKAKKINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNH 569
Query: 899 LSSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDS 1078
LSSDLCRG+LEFAEGRPLGKSGLRWLKIHLANLY GGVEKLSY+GR++FV+N+I +IFDS
Sbjct: 570 LSSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVEKLSYEGRLAFVDNHIDDIFDS 629
Query: 1079 ADNSLNGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAAL 1258
A N +NGNRWWL AEDP QCLAACINLSEAL S SPHTV+SHLPIHQDGSCNGLQHYAAL
Sbjct: 630 ATNPVNGNRWWLTAEDPLQCLAACINLSEALNSPSPHTVISHLPIHQDGSCNGLQHYAAL 689
Query: 1259 GRDSFEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRK 1438
GRDS EAAAVNL+ GDKPADVYSEIA RVH IMKRDS KDP T P+ALLA++L+ Q+DRK
Sbjct: 690 GRDSLEAAAVNLVDGDKPADVYSEIAARVHEIMKRDSNKDPTTSPNALLARILVNQIDRK 749
Query: 1439 LVKQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAA 1618
LVKQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLF+AACYAAKVTLAALGE+FQAA
Sbjct: 750 LVKQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFTAACYAAKVTLAALGEIFQAA 809
Query: 1619 RAIMGWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVE 1798
R IM WLGDCAK+IASENQPVRWTTPLGLPVVQPY K++RH+IRTSLQVLALQRE +SV+
Sbjct: 810 RGIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYCKSERHLIRTSLQVLALQRESNSVD 869
Query: 1799 VRKQRTAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKF 1978
+RKQRTAFPPNFVHSLDGSHMMMTA+ACRD GLRFAGVHDSFWTH CDVD+MN+ILR+KF
Sbjct: 870 IRKQRTAFPPNFVHSLDGSHMMMTALACRDAGLRFAGVHDSFWTHPCDVDQMNEILREKF 929
Query: 1979 VDLYNMPILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2101
V+LY+MPILESLLESF+ SYP LTFPPLP RGDFDL +V++
Sbjct: 930 VELYSMPILESLLESFQASYPALTFPPLPERGDFDLLQVLE 970
>gb|EOY31496.1| DNA/RNA polymerases superfamily protein isoform 1 [Theobroma cacao]
Length = 978
Score = 1140 bits (2950), Expect = 0.0
Identities = 544/701 (77%), Positives = 634/701 (90%), Gaps = 1/701 (0%)
Frame = +2
Query: 2 TKKHQRMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKL 181
TK +QR + E Q S KE IL+KRV SLI+R R++EVQKLV++EE K WGRD QAKL
Sbjct: 273 TKNYQRKKTTDEVQGLS-KEKEILKKRVNSLIRRRRLVEVQKLVKNEEIKPWGRDAQAKL 331
Query: 182 GCCLIQLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLV 361
G L++LLT++AYVQPP++QS DSPPDV+PAFRH FK +++ G+ ++K+YGVIECDPL+
Sbjct: 332 GSRLLELLTETAYVQPPIDQSGDSPPDVQPAFRHKFKTISKDPGKKMMKRYGVIECDPLI 391
Query: 362 LAGLDKTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQ 541
L+GLD++ KHM+IPYVPMLVPPKKW+GYDKGGYLFLPSY+MRTHGSR+QQDA+K V K+
Sbjct: 392 LSGLDRSAKHMLIPYVPMLVPPKKWKGYDKGGYLFLPSYVMRTHGSRKQQDALKGVHVKK 451
Query: 542 MQKVYEALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPEL-LSDDXXXXX 718
MQKV+EALDTLG+TKWRVNK++L+VVESIWA+GGN+AGLV+R D+PIPE S+D
Sbjct: 452 MQKVFEALDTLGSTKWRVNKKVLAVVESIWASGGNIAGLVDRNDIPIPEKPSSEDSTESQ 511
Query: 719 XXXXXXXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNH 898
IN+ERHSQRCDTELKLSVARKM++EEGFYYPHNLDFRGRAYPMHPHLNH
Sbjct: 512 EWKWSVRKANKINRERHSQRCDTELKLSVARKMENEEGFYYPHNLDFRGRAYPMHPHLNH 571
Query: 899 LSSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDS 1078
LSSDLCRG+LEFAEGRPLG+SGL WLKIHLANL+ GGVEKLS+DGR++FV+N++ +IFDS
Sbjct: 572 LSSDLCRGVLEFAEGRPLGRSGLHWLKIHLANLFAGGVEKLSHDGRLAFVDNHLDDIFDS 631
Query: 1079 ADNSLNGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAAL 1258
A+N +NGNRWWL AEDPFQCLAACINLSE+L+SSSPH+V+S+LPIHQDGSCNGLQHYAAL
Sbjct: 632 AENPINGNRWWLTAEDPFQCLAACINLSESLKSSSPHSVLSYLPIHQDGSCNGLQHYAAL 691
Query: 1259 GRDSFEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRK 1438
GRDS EAAAVNL+AG+KPADVYSEIA RVHNIMKRDS+KDPAT+P+A LAKLLI QVDRK
Sbjct: 692 GRDSLEAAAVNLVAGEKPADVYSEIAVRVHNIMKRDSDKDPATNPNASLAKLLIDQVDRK 751
Query: 1439 LVKQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAA 1618
LVKQTVMTSVYGVT+VGAREQIKRRLEEKG ITDDR+LF+AACY AKVTLAALGELFQAA
Sbjct: 752 LVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRVLFAAACYTAKVTLAALGELFQAA 811
Query: 1619 RAIMGWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVE 1798
R IMGWLGDCAK+IASENQPV+WTTPLGLPVVQPY+K++RH+IRTSLQVLALQREGDSVE
Sbjct: 812 RNIMGWLGDCAKVIASENQPVQWTTPLGLPVVQPYYKSERHLIRTSLQVLALQREGDSVE 871
Query: 1799 VRKQRTAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKF 1978
VRKQRTAFPPNFVHSLDGSHMMMTA+ACRD GL FAGVHDSFWTHACDV++MNQILR+KF
Sbjct: 872 VRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVEKMNQILREKF 931
Query: 1979 VDLYNMPILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2101
V+LY+MP+LE+L ES +TSYP+L FPPLP RG+FDL +V++
Sbjct: 932 VELYSMPVLENLFESVQTSYPSLVFPPLPERGNFDLREVLK 972
>ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Populus trichocarpa]
gi|222854390|gb|EEE91937.1| hypothetical protein
POPTR_0006s19490g [Populus trichocarpa]
Length = 982
Score = 1138 bits (2944), Expect = 0.0
Identities = 555/701 (79%), Positives = 615/701 (87%), Gaps = 1/701 (0%)
Frame = +2
Query: 2 TKKHQRMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKL 181
TK HQR + + QE KE +LRKRV SLI+R R++EVQ LV +E K W RD QAKL
Sbjct: 276 TKNHQRKKTMHDVQESMDKEKEMLRKRVNSLIRRKRLMEVQNLVIQDETKPWNRDKQAKL 335
Query: 182 GCCLIQLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLV 361
G LI+LLT++AYVQPPV+QS PPDVRPAFRHIFK T+ GQ VKKYGVIECDPL+
Sbjct: 336 GSRLIELLTETAYVQPPVDQSEGIPPDVRPAFRHIFKSVTKNPGQKTVKKYGVIECDPLI 395
Query: 362 LAGLDKTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQ 541
L GLD T KHM+IPY PMLVPPKKWRGYDKGG+LFLPSY+MRTHGSRQQQDAV++VP KQ
Sbjct: 396 LTGLDGTAKHMLIPYFPMLVPPKKWRGYDKGGHLFLPSYIMRTHGSRQQQDAVRSVPGKQ 455
Query: 542 MQKVYEALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPELLS-DDXXXXX 718
MQKV+EALDTLGNTKWRVN ++L VVE IWA+GGN AGLVNR D+PIPE LS DD
Sbjct: 456 MQKVFEALDTLGNTKWRVNGKVLDVVERIWASGGNNAGLVNRGDIPIPEKLSSDDLTEIQ 515
Query: 719 XXXXXXXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNH 898
INQERHSQRCDTELKLSVARK+KDEEGFYYPHNLDFRGRAYPMHPHL H
Sbjct: 516 KWKWSVRKAKKINQERHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLTH 575
Query: 899 LSSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDS 1078
LSSDLCRG+LEFAEGRPLGKSGL WLKIHLANLY GGVEKLS+DGR++FVEN+++EIFDS
Sbjct: 576 LSSDLCRGVLEFAEGRPLGKSGLCWLKIHLANLYSGGVEKLSHDGRLAFVENHLSEIFDS 635
Query: 1079 ADNSLNGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAAL 1258
A+N +NG RWWL AEDPFQCLAACINLSEAL+S+SPHTV+SHLPIHQDGSCNGLQHYAAL
Sbjct: 636 AENPVNGKRWWLTAEDPFQCLAACINLSEALKSASPHTVISHLPIHQDGSCNGLQHYAAL 695
Query: 1259 GRDSFEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRK 1438
GRDS EAAAVNL+A +KP+DVYSEIA RVH I++RDS KDPAT+P ALLAK+LI +VDRK
Sbjct: 696 GRDSQEAAAVNLVAAEKPSDVYSEIATRVHEIIRRDSNKDPATNPHALLAKVLIDEVDRK 755
Query: 1439 LVKQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAA 1618
LVKQTVMTSVYGVTYVGAREQIKRRLEEKG ITDDR+LFSAACYAAKVTL ALGELFQAA
Sbjct: 756 LVKQTVMTSVYGVTYVGAREQIKRRLEEKGHITDDRVLFSAACYAAKVTLTALGELFQAA 815
Query: 1619 RAIMGWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVE 1798
R IMGWLGDCAK+IASE+QPVRWTTPLGLPVVQPY+KTQRH+IRTSLQVLALQREG SV+
Sbjct: 816 RDIMGWLGDCAKVIASEDQPVRWTTPLGLPVVQPYYKTQRHLIRTSLQVLALQREGSSVQ 875
Query: 1799 VRKQRTAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKF 1978
VRKQRTAFPPNFVHSLDGSHMMMTA+ACRD LRFAGVHDSFWTHA D D MN+ILR+KF
Sbjct: 876 VRKQRTAFPPNFVHSLDGSHMMMTAVACRDADLRFAGVHDSFWTHARDADLMNRILREKF 935
Query: 1979 VDLYNMPILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2101
V+LYNMPILE+LLE F+TSYPTL FP LP RG+FDL +V++
Sbjct: 936 VELYNMPILENLLEDFQTSYPTLKFPSLPERGNFDLQEVLR 976
>gb|EOY31497.1| DNA/RNA polymerases superfamily protein isoform 2 [Theobroma cacao]
Length = 857
Score = 1136 bits (2938), Expect = 0.0
Identities = 544/702 (77%), Positives = 634/702 (90%), Gaps = 2/702 (0%)
Frame = +2
Query: 2 TKKHQRMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKL 181
TK +QR + E Q S KE IL+KRV SLI+R R++EVQKLV++EE K WGRD QAKL
Sbjct: 151 TKNYQRKKTTDEVQGLS-KEKEILKKRVNSLIRRRRLVEVQKLVKNEEIKPWGRDAQAKL 209
Query: 182 GCCLIQLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLV 361
G L++LLT++AYVQPP++QS DSPPDV+PAFRH FK +++ G+ ++K+YGVIECDPL+
Sbjct: 210 GSRLLELLTETAYVQPPIDQSGDSPPDVQPAFRHKFKTISKDPGKKMMKRYGVIECDPLI 269
Query: 362 LAGLDKTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQ 541
L+GLD++ KHM+IPYVPMLVPPKKW+GYDKGGYLFLPSY+MRTHGSR+QQDA+K V K+
Sbjct: 270 LSGLDRSAKHMLIPYVPMLVPPKKWKGYDKGGYLFLPSYVMRTHGSRKQQDALKGVHVKK 329
Query: 542 MQKVYEALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPEL-LSDDXXXXX 718
MQKV+EALDTLG+TKWRVNK++L+VVESIWA+GGN+AGLV+R D+PIPE S+D
Sbjct: 330 MQKVFEALDTLGSTKWRVNKKVLAVVESIWASGGNIAGLVDRNDIPIPEKPSSEDSTESQ 389
Query: 719 XXXXXXXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNH 898
IN+ERHSQRCDTELKLSVARKM++EEGFYYPHNLDFRGRAYPMHPHLNH
Sbjct: 390 EWKWSVRKANKINRERHSQRCDTELKLSVARKMENEEGFYYPHNLDFRGRAYPMHPHLNH 449
Query: 899 LSSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDS 1078
LSSDLCRG+LEFAEGRPLG+SGL WLKIHLANL+ GGVEKLS+DGR++FV+N++ +IFDS
Sbjct: 450 LSSDLCRGVLEFAEGRPLGRSGLHWLKIHLANLFAGGVEKLSHDGRLAFVDNHLDDIFDS 509
Query: 1079 ADNSLNGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAAL 1258
A+N +NGNRWWL AEDPFQCLAACINLSE+L+SSSPH+V+S+LPIHQDGSCNGLQHYAAL
Sbjct: 510 AENPINGNRWWLTAEDPFQCLAACINLSESLKSSSPHSVLSYLPIHQDGSCNGLQHYAAL 569
Query: 1259 GRDSFEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRK 1438
GRDS EAAAVNL+AG+KPADVYSEIA RVHNIMKRDS+KDPAT+P+A LAKLLI QVDRK
Sbjct: 570 GRDSLEAAAVNLVAGEKPADVYSEIAVRVHNIMKRDSDKDPATNPNASLAKLLIDQVDRK 629
Query: 1439 LVKQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAA 1618
LVKQTVMTSVYGVT+VGAREQIKRRLEEKG ITDDR+LF+AACY AKVTLAALGELFQAA
Sbjct: 630 LVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRVLFAAACYTAKVTLAALGELFQAA 689
Query: 1619 RAIMGWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDS-V 1795
R IMGWLGDCAK+IASENQPV+WTTPLGLPVVQPY+K++RH+IRTSLQVLALQREGDS V
Sbjct: 690 RNIMGWLGDCAKVIASENQPVQWTTPLGLPVVQPYYKSERHLIRTSLQVLALQREGDSVV 749
Query: 1796 EVRKQRTAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQK 1975
EVRKQRTAFPPNFVHSLDGSHMMMTA+ACRD GL FAGVHDSFWTHACDV++MNQILR+K
Sbjct: 750 EVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVEKMNQILREK 809
Query: 1976 FVDLYNMPILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2101
FV+LY+MP+LE+L ES +TSYP+L FPPLP RG+FDL +V++
Sbjct: 810 FVELYSMPVLENLFESVQTSYPSLVFPPLPERGNFDLREVLK 851
>ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 973
Score = 1135 bits (2935), Expect = 0.0
Identities = 543/701 (77%), Positives = 618/701 (88%), Gaps = 1/701 (0%)
Frame = +2
Query: 2 TKKHQRMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKL 181
+K QR + ++ KE ILRKRV LI+R R++EVQKL++ E+ K WGRDTQAKL
Sbjct: 267 SKSLQRKKTSVADEDGLSKEKEILRKRVNGLIRRKRLVEVQKLLKKEDMKPWGRDTQAKL 326
Query: 182 GCCLIQLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLV 361
G LI+LLT++A+VQPP++Q AD PPDVRPAFRH K A + GQ LVK YGVIECDPLV
Sbjct: 327 GSRLIELLTETAHVQPPLDQLADGPPDVRPAFRHRLKAAAKSPGQKLVKNYGVIECDPLV 386
Query: 362 LAGLDKTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQ 541
LAGLDKT KHM+IPYVPMLVPPK+W+GYDKGG+LFLPSY+MRTHGSR+Q D ++ + +Q
Sbjct: 387 LAGLDKTAKHMLIPYVPMLVPPKRWKGYDKGGHLFLPSYVMRTHGSRKQVDTMRNISGRQ 446
Query: 542 MQKVYEALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPELL-SDDXXXXX 718
MQKV+EALD LG+TKWR+NK++L+VVESIWA GGN+AGLV+REDVP+PE S+D
Sbjct: 447 MQKVFEALDMLGSTKWRINKKVLNVVESIWARGGNIAGLVDREDVPVPEKPPSEDPTEIQ 506
Query: 719 XXXXXXXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNH 898
+NQERHSQRCDTELKLSVAR+MKDE+GFYYPHNLDFRGRAYPMHPHLNH
Sbjct: 507 EWRWSARKAKKLNQERHSQRCDTELKLSVARRMKDEDGFYYPHNLDFRGRAYPMHPHLNH 566
Query: 899 LSSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDS 1078
LSSDLCRG+LEFAEGRPLGKSGLRWLKIHLANLY GGVEKLSYDGRISFV+N+I +IFDS
Sbjct: 567 LSSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYSGGVEKLSYDGRISFVDNHIDDIFDS 626
Query: 1079 ADNSLNGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAAL 1258
A N +NGNRWWL AEDP QCLAACINLSEAL S SPHTV+SHLPIHQDGSCNGLQHYAAL
Sbjct: 627 ATNPVNGNRWWLTAEDPLQCLAACINLSEALNSPSPHTVISHLPIHQDGSCNGLQHYAAL 686
Query: 1259 GRDSFEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRK 1438
GRD+ EAAAVNL+AG+KPADVYSEIA RVH+IMKRDS KDP T+P+ALLAK+L+ Q+DRK
Sbjct: 687 GRDTLEAAAVNLVAGEKPADVYSEIAVRVHDIMKRDSNKDPTTNPNALLAKVLVNQIDRK 746
Query: 1439 LVKQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAA 1618
LVKQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLF+AACYAAKVTLAALGE+FQAA
Sbjct: 747 LVKQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFTAACYAAKVTLAALGEIFQAA 806
Query: 1619 RAIMGWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVE 1798
R IM WLGDCAK+IASENQPVRWTTPLGLPVVQPY K++RH+IRTSLQVLALQRE + V+
Sbjct: 807 RGIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYCKSERHLIRTSLQVLALQRESNLVD 866
Query: 1799 VRKQRTAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKF 1978
VRKQRTAFPPNFVHSLDGSHMMMTA+ACRD G+RFAGVHDSFWTHACDVD+MNQILR+ F
Sbjct: 867 VRKQRTAFPPNFVHSLDGSHMMMTALACRDAGIRFAGVHDSFWTHACDVDQMNQILRENF 926
Query: 1979 VDLYNMPILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2101
V+LY+ PILE+LLESF+ +YP LTFPPLP RGDFDL +V++
Sbjct: 927 VELYSKPILENLLESFQAAYPELTFPPLPERGDFDLQEVLK 967
>ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Citrus
sinensis]
Length = 1009
Score = 1130 bits (2924), Expect = 0.0
Identities = 543/701 (77%), Positives = 623/701 (88%), Gaps = 1/701 (0%)
Frame = +2
Query: 2 TKKHQRMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKL 181
TK ++R ++ A+++E KE +LRKRV SLIK RV+E QKL+++EE K WGRDTQAKL
Sbjct: 303 TKNYKRKKIIADTEEVLSKEKELLRKRVNSLIKSKRVMEAQKLLKNEETKPWGRDTQAKL 362
Query: 182 GCCLIQLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLV 361
G L++LL ++AYVQ PVN + SPPDVRPAFRH FK + GQ K+YGV+ECDPLV
Sbjct: 363 GSRLVELLIETAYVQHPVNPADYSPPDVRPAFRHRFKTILKHPGQKTTKRYGVVECDPLV 422
Query: 362 LAGLDKTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQ 541
LAGLD++ KHM+IPYVPMLVPPKKW+GY+KGGYLFLPSY+MRTHGSR+QQ+A+K+V
Sbjct: 423 LAGLDRSAKHMLIPYVPMLVPPKKWKGYNKGGYLFLPSYVMRTHGSRKQQEALKSVTGNC 482
Query: 542 MQKVYEALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPEL-LSDDXXXXX 718
M+KV+EALDTLG+TKWRVNK++LSV+ESIW +GGN+AGLV+R DVPIPE LS+D
Sbjct: 483 MKKVFEALDTLGSTKWRVNKQVLSVLESIWVSGGNIAGLVDRNDVPIPEKPLSEDMTEVQ 542
Query: 719 XXXXXXXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNH 898
INQERHSQRCDTELKLSVAR+MKDEEGFYYPHNLDFRGRAYPMHPHLNH
Sbjct: 543 KWKWSVRKAKKINQERHSQRCDTELKLSVARRMKDEEGFYYPHNLDFRGRAYPMHPHLNH 602
Query: 899 LSSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDS 1078
LSSD+CRG+LEFAEGRPLGKSGLRWLKIHLANL+ GGVEKLS+DGR++FVEN++ EIFDS
Sbjct: 603 LSSDVCRGVLEFAEGRPLGKSGLRWLKIHLANLFSGGVEKLSHDGRLAFVENHLYEIFDS 662
Query: 1079 ADNSLNGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAAL 1258
A+N +NG+RWWL AEDPFQCLAACINLSEAL+SSSPH+V+SHLPIHQDGSCNGLQHYAAL
Sbjct: 663 AENPINGSRWWLTAEDPFQCLAACINLSEALKSSSPHSVISHLPIHQDGSCNGLQHYAAL 722
Query: 1259 GRDSFEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRK 1438
GR++ EAAAVNL+AG+KPADVYSEIA RVH IMKRDS KDP+ P ALLAK+LI QVDRK
Sbjct: 723 GRNTLEAAAVNLVAGEKPADVYSEIAVRVHEIMKRDSNKDPSKHPQALLAKILIDQVDRK 782
Query: 1439 LVKQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAA 1618
LVKQTVMTSVYGVT+VGAREQIKRRLEEKG ITDDR LF+AACYAAKVTL ALGE+F+AA
Sbjct: 783 LVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRQLFAAACYAAKVTLTALGEIFEAA 842
Query: 1619 RAIMGWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVE 1798
R+IMGWLGDCAK+IASENQPVRWTTPLGLPVVQPY K +RH+IRTSLQVLALQREG SVE
Sbjct: 843 RSIMGWLGDCAKVIASENQPVRWTTPLGLPVVQPYCKNERHLIRTSLQVLALQREGKSVE 902
Query: 1799 VRKQRTAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKF 1978
+RKQRTAFPPNFVHSLDGSHMMMTA+ACRD GL FAGVHDSFWTHACDVD MNQILR+KF
Sbjct: 903 IRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDEMNQILRKKF 962
Query: 1979 VDLYNMPILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2101
V+LYNMPILE+LLESF+TSYPTL+FPPLP RG+FDL +V++
Sbjct: 963 VELYNMPILENLLESFQTSYPTLSFPPLPERGNFDLEEVLE 1003
>ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citrus clementina]
gi|557556792|gb|ESR66806.1| hypothetical protein
CICLE_v10007333mg [Citrus clementina]
Length = 1012
Score = 1114 bits (2882), Expect = 0.0
Identities = 536/701 (76%), Positives = 619/701 (88%), Gaps = 1/701 (0%)
Frame = +2
Query: 2 TKKHQRMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKL 181
TK ++R ++ A+++E KE +LRKRV SLIK RV+E QKL+++EE K WGRDTQAKL
Sbjct: 306 TKNYKRKKIIADTEEVLSKEKELLRKRVNSLIKSKRVMEAQKLLKNEETKPWGRDTQAKL 365
Query: 182 GCCLIQLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLV 361
G L++LL ++AYVQ PVN + SPPDVRPAFRH FK + GQ K+YGV+ECDPLV
Sbjct: 366 GSRLVELLIETAYVQHPVNPADYSPPDVRPAFRHRFKTILKHPGQKTTKRYGVVECDPLV 425
Query: 362 LAGLDKTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQ 541
L GLD++ KHM+IPYVPMLVPPKKW+GY+KGGYLFLPSY+MRTHGSR+QQ+A+K+V
Sbjct: 426 LEGLDRSAKHMLIPYVPMLVPPKKWKGYNKGGYLFLPSYVMRTHGSRKQQEALKSVTGNC 485
Query: 542 MQKVYEALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPEL-LSDDXXXXX 718
M+KV+EALDTLG+TKWRVNK++LSV+ESIW +GGN+AGLV+R DV IPE LS+D
Sbjct: 486 MKKVFEALDTLGSTKWRVNKQVLSVLESIWVSGGNIAGLVDRNDVLIPEKPLSEDMTEVQ 545
Query: 719 XXXXXXXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNH 898
INQERHSQRCDTELKLSVAR+MKDEEGFYYPHNLDFRGRAYPMHPHLNH
Sbjct: 546 KWKWSVRKAKKINQERHSQRCDTELKLSVARRMKDEEGFYYPHNLDFRGRAYPMHPHLNH 605
Query: 899 LSSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDS 1078
LSSD+CRG+LEFAEGRPLGKSGLRWLKIHLANL+ GGVEKLS+DGR++FVEN++ EIFDS
Sbjct: 606 LSSDVCRGVLEFAEGRPLGKSGLRWLKIHLANLFSGGVEKLSHDGRLAFVENHLYEIFDS 665
Query: 1079 ADNSLNGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAAL 1258
A+N +NG+RWWL AEDPFQCLAACINL+EAL+SSSPH+V+SHLPIHQDGSCNGLQHYAAL
Sbjct: 666 AENPINGSRWWLTAEDPFQCLAACINLAEALKSSSPHSVISHLPIHQDGSCNGLQHYAAL 725
Query: 1259 GRDSFEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRK 1438
GR++ EAAAVNL+AG+KPADVYSEIA RVH IMKRDS KD + P ALLAK+LI QVDRK
Sbjct: 726 GRNTLEAAAVNLVAGEKPADVYSEIAVRVHEIMKRDSNKDHSKHPQALLAKILIDQVDRK 785
Query: 1439 LVKQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAA 1618
LVKQTVMTSVYGVT+VGAREQIKRRLEEKG ITDDR LF+AACYAAKVTL ALGE+F+AA
Sbjct: 786 LVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRQLFAAACYAAKVTLTALGEIFEAA 845
Query: 1619 RAIMGWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVE 1798
R+IMGWLGDCAK+IASENQPVRWTTPLGLPVVQPY K +RH+IRTSLQVLALQREG+ VE
Sbjct: 846 RSIMGWLGDCAKVIASENQPVRWTTPLGLPVVQPYCKNERHLIRTSLQVLALQREGNLVE 905
Query: 1799 VRKQRTAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKF 1978
+RKQRTAFPPNFVHSLDGSHMMMTA+ACRD GL FAGVHDSFWTHACDVD MNQILR+KF
Sbjct: 906 IRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDEMNQILRKKF 965
Query: 1979 VDLYNMPILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2101
V+LYNMP+LE+LLESF+TSYPTL+FP LP RG+FDL +V++
Sbjct: 966 VELYNMPMLENLLESFQTSYPTLSFPSLPERGNFDLEEVLE 1006
>ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Cucumis
sativus]
Length = 975
Score = 1110 bits (2872), Expect = 0.0
Identities = 531/699 (75%), Positives = 614/699 (87%)
Frame = +2
Query: 5 KKHQRMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLG 184
+ +QR +V A++ E KE +LRK+V LI+R ++ EVQKL++ EEFK+WGRDTQAKLG
Sbjct: 272 RSNQRTKVRADT-ECLTKEKEVLRKQVNGLIRRRKLKEVQKLLKKEEFKAWGRDTQAKLG 330
Query: 185 CCLIQLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVL 364
LI+LL +SA++QPPV+QSADSPPD+RPAF H FK + GQ+ VKKYGV+ECDP+VL
Sbjct: 331 SRLIELLIESAFIQPPVSQSADSPPDIRPAFWHGFKPVAKTPGQNFVKKYGVVECDPIVL 390
Query: 365 AGLDKTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQM 544
AGLD+T KHM+IPY+PMLVPPKKW+GYDKGG+ FLPSY+MRTHGS +QQDA+K + KQM
Sbjct: 391 AGLDRTAKHMLIPYIPMLVPPKKWKGYDKGGHFFLPSYVMRTHGSSRQQDAMKNISGKQM 450
Query: 545 QKVYEALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPELLSDDXXXXXXX 724
QKV+EALD LG+TKWRVN+ +LSVVES+WA GGN AGLV+R+DVPIPE D
Sbjct: 451 QKVFEALDMLGSTKWRVNRSVLSVVESLWAQGGNTAGLVDRKDVPIPEKPLGDLTEMQEW 510
Query: 725 XXXXXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLS 904
INQE HSQRCD ELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLS
Sbjct: 511 RWSMKKAKKINQELHSQRCDVELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLS 570
Query: 905 SDLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSAD 1084
SDLCRG+LEFAEGRPLGKSGL WLKIHLANLY GGVEKLSYD R++FV++++ IFDSA
Sbjct: 571 SDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVEKLSYDERLAFVDDHLDNIFDSAS 630
Query: 1085 NSLNGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGR 1264
N +NG+RWWL AEDPFQCLAAC+NLSEAL+SS+PHTV+S+LPIHQDGSCNGLQHYAALGR
Sbjct: 631 NPVNGDRWWLTAEDPFQCLAACMNLSEALKSSAPHTVISYLPIHQDGSCNGLQHYAALGR 690
Query: 1265 DSFEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLV 1444
D+ EAAAVNL+AG+KPADVYSEIA RVH IM RD+ KDP T+P+A LAKLLI QVDRKLV
Sbjct: 691 DTLEAAAVNLVAGEKPADVYSEIAARVHTIMIRDASKDPTTNPNASLAKLLIDQVDRKLV 750
Query: 1445 KQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARA 1624
KQTVMTSVYGVTY+GAREQIKRRLEEKGLI+DDRL F A+CYAAKVTL+ALGE+F+AAR
Sbjct: 751 KQTVMTSVYGVTYIGAREQIKRRLEEKGLISDDRLRFRASCYAAKVTLSALGEIFEAARG 810
Query: 1625 IMGWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVR 1804
IMGWLGDCAK+IA +NQPVRWTTPLGLPVVQPY+K++RH+IRTSLQVLALQREG+ V+VR
Sbjct: 811 IMGWLGDCAKVIAKDNQPVRWTTPLGLPVVQPYYKSERHLIRTSLQVLALQREGNLVDVR 870
Query: 1805 KQRTAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKFVD 1984
KQRTAFPPNFVHSLDGSHMM+TA+ACRD GLRFAGVHDSFWTHACDVDRMN ILR+KFV+
Sbjct: 871 KQRTAFPPNFVHSLDGSHMMLTALACRDAGLRFAGVHDSFWTHACDVDRMNLILREKFVE 930
Query: 1985 LYNMPILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2101
LY+MP+LESLLE FET+YP LTFP LP RGDFDL +V++
Sbjct: 931 LYSMPVLESLLEGFETTYPGLTFPSLPGRGDFDLQEVLK 969
>ref|XP_004144791.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Cucumis
sativus]
Length = 975
Score = 1110 bits (2872), Expect = 0.0
Identities = 531/699 (75%), Positives = 614/699 (87%)
Frame = +2
Query: 5 KKHQRMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLG 184
+ +QR +V A++ E KE +LRK+V LI+R ++ EVQKL++ EEFK+WGRDTQAKLG
Sbjct: 272 RSNQRTKVRADT-ECLTKEKEVLRKQVNGLIRRRKLKEVQKLLKKEEFKAWGRDTQAKLG 330
Query: 185 CCLIQLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVL 364
LI+LL +SA++QPPV+QSADSPPD+RPAF H FK + GQ+ VKKYGV+ECDP+VL
Sbjct: 331 SRLIELLIESAFIQPPVSQSADSPPDIRPAFWHGFKPVAKTPGQNFVKKYGVVECDPIVL 390
Query: 365 AGLDKTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQM 544
AGLD+T KHM+IPY+PMLVPPKKW+GYDKGG+ FLPSY+MRTHGS +QQDA+K + KQM
Sbjct: 391 AGLDRTAKHMLIPYIPMLVPPKKWKGYDKGGHFFLPSYVMRTHGSSRQQDAMKNISGKQM 450
Query: 545 QKVYEALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPELLSDDXXXXXXX 724
QKV+EALD LG+TKWRVN+ +LSVVES+WA GGN AGLV+R+DVPIPE D
Sbjct: 451 QKVFEALDMLGSTKWRVNRSVLSVVESLWAQGGNTAGLVDRKDVPIPEKPLGDLTEMQEW 510
Query: 725 XXXXXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLS 904
INQE HSQRCD ELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLS
Sbjct: 511 RWSMKKAKKINQELHSQRCDVELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLS 570
Query: 905 SDLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSAD 1084
SDLCRG+LEFAEGRPLGKSGL WLKIHLANLY GGVEKLSYD R++FV++++ IFDSA
Sbjct: 571 SDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVEKLSYDERLAFVDDHLDNIFDSAS 630
Query: 1085 NSLNGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGR 1264
N +NG+RWWL AEDPFQCLAAC+NLSEAL+SS+PHTV+S+LPIHQDGSCNGLQHYAALGR
Sbjct: 631 NPVNGDRWWLTAEDPFQCLAACMNLSEALKSSAPHTVISYLPIHQDGSCNGLQHYAALGR 690
Query: 1265 DSFEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLV 1444
D+ EAAAVNL+AG+KPADVYSEIA RVH IM RD+ KDP T+P+A LAKLLI QVDRKLV
Sbjct: 691 DTLEAAAVNLVAGEKPADVYSEIAARVHTIMIRDASKDPTTNPNASLAKLLIDQVDRKLV 750
Query: 1445 KQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARA 1624
KQTVMTSVYGVTY+GAREQIKRRLEEKGLI+DDRL F A+CYAAKVTL+ALGE+F+AAR
Sbjct: 751 KQTVMTSVYGVTYIGAREQIKRRLEEKGLISDDRLRFRASCYAAKVTLSALGEIFEAARG 810
Query: 1625 IMGWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVR 1804
IMGWLGDCAK+IA +NQPVRWTTPLGLPVVQPY+K++RH+IRTSLQVLALQREG+ V+VR
Sbjct: 811 IMGWLGDCAKVIAKDNQPVRWTTPLGLPVVQPYYKSERHLIRTSLQVLALQREGNLVDVR 870
Query: 1805 KQRTAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKFVD 1984
KQRTAFPPNFVHSLDGSHMM+TA+ACRD GLRFAGVHDSFWTHACDVDRMN ILR+KFV+
Sbjct: 871 KQRTAFPPNFVHSLDGSHMMLTALACRDAGLRFAGVHDSFWTHACDVDRMNLILREKFVE 930
Query: 1985 LYNMPILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2101
LY+MP+LESLLE FET+YP LTFP LP RGDFDL +V++
Sbjct: 931 LYSMPVLESLLEGFETTYPGLTFPSLPGRGDFDLQEVLK 969
>emb|CAC80139.1| DNA-dependent RNA polymerase [Spinacia oleracea]
Length = 989
Score = 1085 bits (2806), Expect = 0.0
Identities = 511/687 (74%), Positives = 604/687 (87%), Gaps = 1/687 (0%)
Frame = +2
Query: 44 EDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCCLIQLLTQSAYV 223
ED +KE I R RVKSLIKR R+ E KLV SE+ KSW +DTQAKLG LI+LL +AY+
Sbjct: 297 EDLLKEKEIQRNRVKSLIKRKRLFEAAKLVTSEDSKSWSQDTQAKLGSRLIELLIDTAYI 356
Query: 224 QPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAGLDKTVKHMIIP 403
Q P +QSAD+PPDVRPAFRH FKI E GQ +VK+YGVIECDPLVL G+D++ ++MIIP
Sbjct: 357 QHPTSQSADTPPDVRPAFRHKFKILNNELGQQVVKRYGVIECDPLVLKGIDRSARYMIIP 416
Query: 404 YVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQKVYEALDTLGNT 583
YVPML+PPK W+GYDKGGYLFLPSY+MRTHGSR+QQDA++ P +QMQKV+EAL+TLG+T
Sbjct: 417 YVPMLIPPKNWKGYDKGGYLFLPSYVMRTHGSRKQQDAMRKTPPQQMQKVFEALNTLGHT 476
Query: 584 KWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPEL-LSDDXXXXXXXXXXXXXXXXINQ 760
KWR+N+++L VVE++WA+GGN+ GLVN +DVP+PE L++D IN+
Sbjct: 477 KWRINRKVLGVVENLWASGGNIGGLVNCDDVPLPEKPLTEDPAEIDTWKWSVRKAKKINR 536
Query: 761 ERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAE 940
ERH+ RCD ELK+SVA+KMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFA
Sbjct: 537 ERHALRCDVELKISVAQKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAS 596
Query: 941 GRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADNSLNGNRWWLKA 1120
GRPLGK+GL WLKIHLAN+Y GGV+KLSY+ R +FVEN++ E+FDSA N +NGNRWWL A
Sbjct: 597 GRPLGKTGLHWLKIHLANVYAGGVDKLSYEARAAFVENHLEEVFDSATNPINGNRWWLSA 656
Query: 1121 EDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLIA 1300
EDPFQCLAACI+L+ AL SSSPH+ +S+LPIHQDGSCNGLQHYAALGRDS EAAAVNL+A
Sbjct: 657 EDPFQCLAACIDLTGALNSSSPHSFISYLPIHQDGSCNGLQHYAALGRDSKEAAAVNLVA 716
Query: 1301 GDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQTVMTSVYGVT 1480
G++PADVYSEIA RV IM++DS KDP TDP A+LAK+L+ QVDRKLVKQTVMTSVYGVT
Sbjct: 717 GEEPADVYSEIAVRVREIMEKDSRKDPKTDPHAVLAKVLVDQVDRKLVKQTVMTSVYGVT 776
Query: 1481 YVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIMGWLGDCAKII 1660
+VGAREQIKRRLEEKG+ITDDRLLFSAACY+AKVT++ALG+LFQAAR IM WLGDCAK+I
Sbjct: 777 FVGAREQIKRRLEEKGVITDDRLLFSAACYSAKVTMSALGQLFQAARGIMDWLGDCAKVI 836
Query: 1661 ASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQRTAFPPNFVH 1840
ASENQPVRWTTPLGLPVVQPY K++RH+I+TSLQVLALQ+EG+ +EV+KQRTAFPPN+VH
Sbjct: 837 ASENQPVRWTTPLGLPVVQPYCKSKRHLIKTSLQVLALQQEGEGIEVKKQRTAFPPNYVH 896
Query: 1841 SLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLYNMPILESLLE 2020
SLDG+HMMMTA+ACRD GL+FAGVHDSFWTHACDV++MNQILR KFV+LYNMPILE+LLE
Sbjct: 897 SLDGTHMMMTAVACRDAGLQFAGVHDSFWTHACDVEKMNQILRVKFVELYNMPILENLLE 956
Query: 2021 SFETSYPTLTFPPLPNRGDFDLNKVVQ 2101
SF+T+YP TFPPLP RGDFDL +V++
Sbjct: 957 SFQTAYPASTFPPLPERGDFDLEEVLE 983
>ref|NP_179989.1| DNA-directed RNA polymerase 3 [Arabidopsis thaliana]
gi|3914826|sp|O24600.1|RPOT3_ARATH RecName:
Full=DNA-directed RNA polymerase 3, chloroplastic; Flags:
Precursor gi|2330560|emb|CAA69972.1| chloroplast
single-subunit DNA-dependent RNA polymerase [Arabidopsis
thaliana] gi|2330564|emb|CAA69717.1| chloroplast
single-subunit DNA-dependent RNA polymerase [Arabidopsis
thaliana] gi|4115372|gb|AAD03373.1| chloroplast single
subunit DNA-dependent RNA polymerase [Arabidopsis
thaliana] gi|110739160|dbj|BAF01496.1| chloroplast single
subunit DNA-dependent RNA polymerase [Arabidopsis
thaliana] gi|330252437|gb|AEC07531.1| DNA-directed RNA
polymerase 3 [Arabidopsis thaliana]
Length = 993
Score = 1080 bits (2794), Expect = 0.0
Identities = 517/699 (73%), Positives = 604/699 (86%), Gaps = 1/699 (0%)
Frame = +2
Query: 8 KHQRMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGC 187
K R +SQE+ +KE +LRKRV SLI+R R+I+ K+V+SE K WGR TQAKLG
Sbjct: 290 KRTRKNNAGDSQEE-LKEKQLLRKRVNSLIRRKRIIDALKVVKSEGTKPWGRATQAKLGS 348
Query: 188 CLIQLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLA 367
L++LL ++AYVQPP+ QS DS P+ RPAFRH FK T+ G LV++YGVIECD L+LA
Sbjct: 349 RLLELLIEAAYVQPPLTQSGDSIPEFRPAFRHRFKTVTKYPGSKLVRRYGVIECDSLLLA 408
Query: 368 GLDKTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQ 547
GLDK+ KHM+IPYVPMLVPPK+W+GYDKGGYLFLPSY+MRTHGS++QQDA+K + K
Sbjct: 409 GLDKSAKHMLIPYVPMLVPPKRWKGYDKGGYLFLPSYIMRTHGSKKQQDALKDISHKTAH 468
Query: 548 KVYEALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPEL-LSDDXXXXXXX 724
+V+EALDTLGNTKWRVN+ IL VVE +WA GGN+AGLVNREDVPIPE S+D
Sbjct: 469 RVFEALDTLGNTKWRVNRNILDVVERLWADGGNIAGLVNREDVPIPEKPSSEDPEELQSW 528
Query: 725 XXXXXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLS 904
IN+ERHS RCD ELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLS
Sbjct: 529 KWSARKANKINRERHSLRCDVELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLS 588
Query: 905 SDLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSAD 1084
SDLCRG LEFAEGRPLGKSGL WLKIHLANLY GGVEKLS+D R++FVEN++ +I DSA+
Sbjct: 589 SDLCRGTLEFAEGRPLGKSGLHWLKIHLANLYAGGVEKLSHDARLAFVENHLDDIMDSAE 648
Query: 1085 NSLNGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGR 1264
N ++G RWWLKAEDPFQCLAAC+ L++AL+S SP++V+SHLPIHQDGSCNGLQHYAALGR
Sbjct: 649 NPIHGKRWWLKAEDPFQCLAACVILTQALKSPSPYSVISHLPIHQDGSCNGLQHYAALGR 708
Query: 1265 DSFEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLV 1444
DSFEAAAVNL+AG+KPADVYSEI+ RVH IMK+DS KDP ++P+A LAK+LI QVDRKLV
Sbjct: 709 DSFEAAAVNLVAGEKPADVYSEISRRVHEIMKKDSSKDPESNPTAALAKILITQVDRKLV 768
Query: 1445 KQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARA 1624
KQTVMTSVYGVTYVGAREQIKRRLEEKG+ITD+R+LF+AACY+AKVTLAALGE+F+AARA
Sbjct: 769 KQTVMTSVYGVTYVGAREQIKRRLEEKGVITDERMLFAAACYSAKVTLAALGEIFEAARA 828
Query: 1625 IMGWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVR 1804
IM WLGDCAKIIAS+N PVRW TPLGLPVVQPY +++RH+IRTSLQVLALQREG++V+VR
Sbjct: 829 IMSWLGDCAKIIASDNHPVRWITPLGLPVVQPYCRSERHLIRTSLQVLALQREGNTVDVR 888
Query: 1805 KQRTAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKFVD 1984
KQRTAFPPNFVHSLDG+HMMMTA+ACR+ GL FAGVHDS+WTHACDVD MN+ILR+KFV+
Sbjct: 889 KQRTAFPPNFVHSLDGTHMMMTAVACREAGLNFAGVHDSYWTHACDVDTMNRILREKFVE 948
Query: 1985 LYNMPILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2101
LYN PILE LL+SF+ SYP L FPP+P RGDFDL +V++
Sbjct: 949 LYNTPILEDLLQSFQESYPNLVFPPVPKRGDFDLKEVLK 987
>ref|XP_006296121.1| hypothetical protein CARUB_v10025273mg [Capsella rubella]
gi|482564829|gb|EOA29019.1| hypothetical protein
CARUB_v10025273mg [Capsella rubella]
Length = 991
Score = 1080 bits (2793), Expect = 0.0
Identities = 515/699 (73%), Positives = 605/699 (86%), Gaps = 1/699 (0%)
Frame = +2
Query: 8 KHQRMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGC 187
K R +SQE+ +KE +LRKRV SLI+R R+I+ K+V+SE K WGR TQAKLG
Sbjct: 288 KRTRKNNAGDSQEE-LKEKQLLRKRVNSLIRRKRIIDALKVVKSEGIKPWGRATQAKLGS 346
Query: 188 CLIQLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLA 367
L++LL ++AYVQPP+ QS DS P+ RPAFRH FK T+ G LV++YGVIECD L+LA
Sbjct: 347 RLLELLIETAYVQPPLTQSGDSIPEFRPAFRHKFKTVTKYPGSKLVRRYGVIECDSLLLA 406
Query: 368 GLDKTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQ 547
GLDK+ KHMIIPYVPMLVPPK+W+GYDKGGYLFLPSY+MRTHGS++QQDA++ + +K
Sbjct: 407 GLDKSAKHMIIPYVPMLVPPKRWKGYDKGGYLFLPSYIMRTHGSKKQQDALRDISSKTAH 466
Query: 548 KVYEALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPEL-LSDDXXXXXXX 724
+V+EALDTLGNTKWRVN++IL VVE +WA GGN+AGLVNREDVPIPE S+D
Sbjct: 467 RVFEALDTLGNTKWRVNRKILDVVERLWADGGNIAGLVNREDVPIPEKPSSEDPEELQSW 526
Query: 725 XXXXXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLS 904
IN+ERHS RCD ELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLS
Sbjct: 527 KWSVRKANKINRERHSLRCDVELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLS 586
Query: 905 SDLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSAD 1084
SDLCRG LEFAEGRPLGKSGL WLKIHLANLY GGVEKLS+D R++FVE ++ ++ DSA+
Sbjct: 587 SDLCRGTLEFAEGRPLGKSGLHWLKIHLANLYAGGVEKLSHDARLAFVETHLDDVMDSAE 646
Query: 1085 NSLNGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGR 1264
N ++G RWWLKAEDPFQCLAAC+ L++AL+S SP++V+SHLPIHQDGSCNGLQHYAALGR
Sbjct: 647 NPIHGKRWWLKAEDPFQCLAACVILTQALKSPSPYSVISHLPIHQDGSCNGLQHYAALGR 706
Query: 1265 DSFEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLV 1444
DSFEAAAVNL+AG+KPADVYSEI+ RVH IMK+DS KDP ++P+A LAK+LI QVDRKLV
Sbjct: 707 DSFEAAAVNLVAGEKPADVYSEISRRVHEIMKKDSSKDPESNPTAALAKILITQVDRKLV 766
Query: 1445 KQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARA 1624
KQTVMTSVYGVTYVGAREQIKRRLEEKG+ITD+R+LF+AACY+AKVTLAALGE+F+AARA
Sbjct: 767 KQTVMTSVYGVTYVGAREQIKRRLEEKGVITDERMLFAAACYSAKVTLAALGEIFEAARA 826
Query: 1625 IMGWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVR 1804
IM WLGDCAKIIAS+N PVRW TPLGLPVVQPY +++RH+IRTSLQVLALQREG++V+VR
Sbjct: 827 IMSWLGDCAKIIASDNHPVRWITPLGLPVVQPYCRSERHLIRTSLQVLALQREGNTVDVR 886
Query: 1805 KQRTAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKFVD 1984
KQRTAFPPNFVHSLDG+HMMMTA+ACR+ GL FAGVHDS+WTHACDVD MN+ILR+KFV+
Sbjct: 887 KQRTAFPPNFVHSLDGTHMMMTAVACREAGLNFAGVHDSYWTHACDVDTMNRILREKFVE 946
Query: 1985 LYNMPILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2101
LYN PILE LL+SF+ SYP L FPP+P RGDFDL +V++
Sbjct: 947 LYNTPILEDLLQSFQESYPNLVFPPVPKRGDFDLKEVLK 985