BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00000347
         (595 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAW63130.1| 31 kDa putative protein [Strawberry latent ringsp...   179   4e-43
ref|NP_620833.1| 36 kDa protein [Strawberry latent ringspot viru...   126   1e-31

>gb|AAW63130.1| 31 kDa putative protein [Strawberry latent ringspot virus satellite
           RNA]
          Length = 287

 Score =  179 bits (455), Expect = 4e-43
 Identities = 95/161 (59%), Positives = 110/161 (68%), Gaps = 2/161 (1%)
 Frame = -3

Query: 593 GVVTLVETSRDFTLFEDN--TSAVCAIPGQTPAEAESLKREFAKRALVFSGRRLQPVGLP 420
           GVVTLVET +DF LF D    + V   PGQT  EAE+L+REF KR L FSGRRL   GLP
Sbjct: 129 GVVTLVETEKDFALFGDEFTQNQVVPCPGQTLPEAEALQREFHKRTLAFSGRRLSVSGLP 188

Query: 419 EDLSSDPFASPLPRGPVPARRIAHVDPFTWANMSYGQCTRVLALYKQLCSCFGAKMFQST 240
               SDPFASP P  P    ++AHVDP +W  MS+GQC+R L LYKQLCSCFG KMF S+
Sbjct: 189 S--GSDPFASPSPVRPALTPKVAHVDPVSWEGMSFGQCSRALTLYKQLCSCFGVKMFSSS 246

Query: 239 LYTEAVRKVCKLTDVVPVSIPEFIGRLGQVDFGAAPAHVYV 117
           LY  AVRKV +L +  PV+IPE   RLGQVD  A   H++V
Sbjct: 247 LYGMAVRKVLRLREDFPVAIPENFARLGQVDRDARAVHLFV 287


>ref|NP_620833.1| 36 kDa protein [Strawberry latent ringspot virus satellite RNA]
           gi|478364|pir||JQ2018 hypothetical 36.5K protein -
           strawberry latent ringspot virus
           gi|312511|emb|CAA49480.1| 36 kDa protein [Strawberry
           latent ringspot virus satellite RNA]
          Length = 331

 Score =  126 bits (316), Expect(2) = 1e-31
 Identities = 72/133 (54%), Positives = 84/133 (63%), Gaps = 3/133 (2%)
 Frame = -3

Query: 593 GVVTLVETSRDFTLFEDN--TSAVCAIPGQTPAEAESLKREFAKRALVFSGRRLQPVGLP 420
           GVVTLVET +DF LF D    + V   PGQT +EAESL+REF KRA  FSG+RL   GLP
Sbjct: 129 GVVTLVETEKDFALFCDEFTQNQVVPCPGQTLSEAESLQREFHKRAFAFSGKRLSVSGLP 188

Query: 419 EDLSSDPFASPLPR-GPVPARRIAHVDPFTWANMSYGQCTRVLALYKQLCSCFGAKMFQS 243
           E     P  S L R       +  HVDP +W  MS+GQC+R L LY+QLC CFG KMF S
Sbjct: 189 EG----PIPSLLLRQSACNCPKGCHVDPVSWEGMSFGQCSRALTLYRQLCGCFGMKMFSS 244

Query: 242 TLYTEAVRKVCKL 204
           +LY  AVR+   L
Sbjct: 245 SLYGMAVRRFSAL 257



 Score = 36.2 bits (82), Expect(2) = 1e-31
 Identities = 15/26 (57%), Positives = 18/26 (69%)
 Frame = -1

Query: 127 TFMYSYTCSRRVCAMLSAGTWALFKD 50
           T +YSYT S R   M+ +GTWA FKD
Sbjct: 283 TSLYSYTSSSRFVPMIRSGTWAFFKD 308