BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00000346
         (568 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAW63130.1| 31 kDa putative protein [Strawberry latent ringsp...   176   3e-42
ref|NP_620833.1| 36 kDa protein [Strawberry latent ringspot viru...   124   2e-29

>gb|AAW63130.1| 31 kDa putative protein [Strawberry latent ringspot virus satellite
           RNA]
          Length = 287

 Score =  176 bits (447), Expect = 3e-42
 Identities = 94/161 (58%), Positives = 111/161 (68%), Gaps = 2/161 (1%)
 Frame = -2

Query: 567 GVVTLVETSRDFTLFEDNTSAVCVIP--GQTPAEAESLKREFAKRALVFSGRRLLPVGLP 394
           GVVTLVET +DF LF D  +   V+P  GQT  EAE+L+REF KR L FSGRRL   GLP
Sbjct: 129 GVVTLVETEKDFALFGDEFTQNQVVPCPGQTLPEAEALQREFHKRTLAFSGRRLSVSGLP 188

Query: 393 EDLSSDPFASPLPRGPVPARRIAHVDPFTWANMSYGQCTRVLALYKQLCSCFGARMFQST 214
               SDPFASP P  P    ++AHVDP +W  MS+GQC+R L LYKQLCSCFG +MF S+
Sbjct: 189 S--GSDPFASPSPVRPALTPKVAHVDPVSWEGMSFGQCSRALTLYKQLCSCFGVKMFSSS 246

Query: 213 LYIEAVRKVCKLADVVPVSIPEFIGRLGQVDFGAAPAHVYV 91
           LY  AVRKV +L +  PV+IPE   RLGQVD  A   H++V
Sbjct: 247 LYGMAVRKVLRLREDFPVAIPENFARLGQVDRDARAVHLFV 287


>ref|NP_620833.1| 36 kDa protein [Strawberry latent ringspot virus satellite RNA]
           gi|478364|pir||JQ2018 hypothetical 36.5K protein -
           strawberry latent ringspot virus
           gi|312511|emb|CAA49480.1| 36 kDa protein [Strawberry
           latent ringspot virus satellite RNA]
          Length = 331

 Score =  124 bits (310), Expect(2) = 2e-29
 Identities = 71/136 (52%), Positives = 86/136 (63%), Gaps = 3/136 (2%)
 Frame = -2

Query: 567 GVVTLVETSRDFTLFEDNTSAVCVIP--GQTPAEAESLKREFAKRALVFSGRRLLPVGLP 394
           GVVTLVET +DF LF D  +   V+P  GQT +EAESL+REF KRA  FSG+RL   GLP
Sbjct: 129 GVVTLVETEKDFALFCDEFTQNQVVPCPGQTLSEAESLQREFHKRAFAFSGKRLSVSGLP 188

Query: 393 EDLSSDPFASPLPR-GPVPARRIAHVDPFTWANMSYGQCTRVLALYKQLCSCFGARMFQS 217
           E     P  S L R       +  HVDP +W  MS+GQC+R L LY+QLC CFG +MF S
Sbjct: 189 EG----PIPSLLLRQSACNCPKGCHVDPVSWEGMSFGQCSRALTLYRQLCGCFGMKMFSS 244

Query: 216 TLYIEAVRKVCKLADV 169
           +LY  AVR+   L  +
Sbjct: 245 SLYGMAVRRFSALGKI 260



 Score = 31.6 bits (70), Expect(2) = 2e-29
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = -3

Query: 101 TFMYSCT*SRRVCAMLSAGTWALFKD 24
           T +YS T S R   M+ +GTWA FKD
Sbjct: 283 TSLYSYTSSSRFVPMIRSGTWAFFKD 308