BLASTX nr result
ID: Rehmannia25_contig00000181
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00000181
(1614 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containi... 287 8e-75
gb|EMJ14013.1| hypothetical protein PRUPE_ppa003248mg [Prunus pe... 273 2e-70
ref|XP_006348737.1| PREDICTED: pentatricopeptide repeat-containi... 266 1e-68
ref|XP_004293847.1| PREDICTED: pentatricopeptide repeat-containi... 258 4e-66
ref|XP_006579638.1| PREDICTED: pentatricopeptide repeat-containi... 238 5e-60
gb|EOX92409.1| Pentatricopeptide repeat-containing protein, puta... 236 2e-59
gb|EOX92408.1| Pentatricopeptide repeat-containing protein, puta... 236 2e-59
gb|EOX92407.1| Pentatricopeptide repeat-containing protein, puta... 236 2e-59
ref|XP_006481070.1| PREDICTED: pentatricopeptide repeat-containi... 234 8e-59
ref|XP_006429438.1| hypothetical protein CICLE_v10011094mg [Citr... 234 8e-59
ref|XP_002514422.1| pentatricopeptide repeat-containing protein,... 233 2e-58
ref|XP_002525881.1| pentatricopeptide repeat-containing protein,... 232 3e-58
gb|ESW11537.1| hypothetical protein PHAVU_008G038900g [Phaseolus... 221 5e-55
ref|XP_003602250.1| Pentatricopeptide repeat-containing protein ... 202 3e-49
ref|XP_006855624.1| hypothetical protein AMTR_s00044p00087550 [A... 202 4e-49
ref|XP_003577009.1| PREDICTED: putative pentatricopeptide repeat... 196 2e-47
ref|XP_006663648.1| PREDICTED: pentatricopeptide repeat-containi... 188 7e-45
gb|ABA95188.1| salt-inducible protein, putative [Oryza sativa Ja... 186 2e-44
gb|EEE52515.1| hypothetical protein OsJ_34721 [Oryza sativa Japo... 186 2e-44
ref|NP_001047566.1| Os02g0644600 [Oryza sativa Japonica Group] g... 186 2e-44
>ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial [Vitis vinifera]
Length = 817
Score = 287 bits (735), Expect = 8e-75
Identities = 135/212 (63%), Positives = 170/212 (80%)
Frame = +3
Query: 18 PSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDL 197
P++ MYGKLI A CR GDMKRA+ +D +V +G++PD+ITYT+M+NGYC VNCLREA D+
Sbjct: 606 PNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDI 665
Query: 198 FSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELK 377
F+DMK+RGI PD+ITYTV+LDG KV++K AR ++G+++ K AS FW EMKEM +K
Sbjct: 666 FNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIK 725
Query: 378 PDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTL 557
PDV+CYT LIDSHCK++NLQDA +L+DEMI GL PD VTYTALLS C GDMD+ TL
Sbjct: 726 PDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAITL 785
Query: 558 VNEMESKGIQPDSRTMSTIDRGIARAKKMQFR 653
VNEM KGI+PDSR MS + RGI +A+K+QFR
Sbjct: 786 VNEMSFKGIEPDSRAMSVLHRGILKARKVQFR 817
Score = 112 bits (281), Expect = 3e-22
Identities = 64/215 (29%), Positives = 113/215 (52%)
Frame = +3
Query: 3 SSGDGPSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLR 182
+ G P +YG LI A C+AG++ +A ++ MV+ G+ + + + +L C +
Sbjct: 325 NEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMAS 384
Query: 183 EALDLFSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMK 362
E +D F + + GI D + Y +++D LCK+ KV++ EMK
Sbjct: 385 EVVDQFKEFRDSGIFLDEVLYNIVVDALCKLG--------------KVEEAVELL-NEMK 429
Query: 363 EMELKPDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMD 542
+ DV+ YT LI +C L DA ++F+EM E G+ PD VTY L+ G+ ++G
Sbjct: 430 GRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKK 489
Query: 543 KVDTLVNEMESKGIQPDSRTMSTIDRGIARAKKMQ 647
+ L++ + ++G++P+S T + I G+ A K++
Sbjct: 490 EALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVK 524
Score = 101 bits (252), Expect = 8e-19
Identities = 62/221 (28%), Positives = 114/221 (51%), Gaps = 5/221 (2%)
Frame = +3
Query: 3 SSGDGPSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLR 182
+ G P+ + ++I LC AG +K A + + +K L Y+ M++GYC N R
Sbjct: 500 TQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLE----NYSAMVDGYCKANFTR 555
Query: 183 EALDLFSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMK 362
+A +LFS + K+GI + LL LC + E +K + + M
Sbjct: 556 KAYELFSRLSKQGILVKKKSCFKLLSSLCM----------EGEYDKALILLE-----RML 600
Query: 363 EMELKPDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMD 542
++++P+ I Y LI + C+ +++ A +FD ++E G+ PD +TYT +++GYC+ +
Sbjct: 601 ALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLR 660
Query: 543 KVDTLVNEMESKGIQPDSRTMSTIDRG-----IARAKKMQF 650
+ + N+M+ +GI+PD T + + G + A+ +QF
Sbjct: 661 EARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQF 701
Score = 98.6 bits (244), Expect = 7e-18
Identities = 58/191 (30%), Positives = 98/191 (51%)
Frame = +3
Query: 42 LISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDLFSDMKKRG 221
L++ L G + A Y H+ GL+P+ TY I + C EA+D+F +M++ G
Sbjct: 198 LMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAG 257
Query: 222 IGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELKPDVICYTA 401
+ P+ +T + ++GLC S KR+ G + ++ + +A W D YTA
Sbjct: 258 VNPNAVTCSTYIEGLC--SHKRSDL-----GYEALRALRAANW--------PIDTFAYTA 302
Query: 402 LIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLVNEMESKG 581
+I C L++A +F +M+ G+ PD Y AL+ YCK G++ + L N+M S G
Sbjct: 303 VIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNG 362
Query: 582 IQPDSRTMSTI 614
I+ + +S+I
Sbjct: 363 IKTNCVIVSSI 373
Score = 94.7 bits (234), Expect = 1e-16
Identities = 68/263 (25%), Positives = 107/263 (40%), Gaps = 55/263 (20%)
Frame = +3
Query: 9 GDGPSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIIT----------------- 137
G P+ YG I ALCR G+ + A + M G++P+ +T
Sbjct: 222 GLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLG 281
Query: 138 ------------------YTIMLNGYCHVNCLREALDLFSDMKKRGIGPDIITYTVLLDG 263
YT ++ G+C L+EA D+F DM GI PD Y L+
Sbjct: 282 YEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHA 341
Query: 264 LCKVS--MKRARFQNDAEGN---KKVKQVASAFWC---------------EMKEMELKPD 383
CK ++ ND N V+S C E ++ + D
Sbjct: 342 YCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLD 401
Query: 384 VICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLVN 563
+ Y ++D+ CK +++A L +EM + D V YT L++GYC G + +
Sbjct: 402 EVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFE 461
Query: 564 EMESKGIQPDSRTMSTIDRGIAR 632
EM+ +GI+PD T + + G +R
Sbjct: 462 EMKERGIEPDIVTYNILVGGFSR 484
Score = 59.3 bits (142), Expect = 5e-06
Identities = 40/173 (23%), Positives = 75/173 (43%)
Frame = +3
Query: 129 IITYTIMLNGYCHVNCLREALDLFSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDA 308
I+ +++ Y V EA+D K+RG P I++ L++ L +
Sbjct: 157 ILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIE------------ 204
Query: 309 EGNKKVKQVASAFWCEMKEMELKPDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPD 488
+ K+ +A A + +K + L P+ Y I + C+ N ++A +F EM E G+ P+
Sbjct: 205 --HGKI-DMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPN 261
Query: 489 TVTYTALLSGYCKHGDMDKVDTLVNEMESKGIQPDSRTMSTIDRGIARAKKMQ 647
VT + + G C H D + + + D+ + + RG K++
Sbjct: 262 AVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLK 314
Score = 58.9 bits (141), Expect = 6e-06
Identities = 31/88 (35%), Positives = 48/88 (54%)
Frame = +3
Query: 9 GDGPSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREA 188
G P Y LI + C+ +++ A YD M+ +GL PDI+TYT +L+ C + A
Sbjct: 723 GIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRA 782
Query: 189 LDLFSDMKKRGIGPDIITYTVLLDGLCK 272
+ L ++M +GI PD +VL G+ K
Sbjct: 783 ITLVNEMSFKGIEPDSRAMSVLHRGILK 810
>gb|EMJ14013.1| hypothetical protein PRUPE_ppa003248mg [Prunus persica]
Length = 589
Score = 273 bits (698), Expect = 2e-70
Identities = 128/212 (60%), Positives = 160/212 (75%)
Frame = +3
Query: 18 PSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDL 197
P K MY K+I++LC+AG++K+A W +D +V +G +PD+I YT+++N YC VNCLREA DL
Sbjct: 377 PRKTMYNKVIASLCKAGEVKKAHWFFDTLVERGFTPDVINYTMLINSYCRVNCLREAHDL 436
Query: 198 FSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELK 377
F DMK++GI PDIITYTVLLD K +++R A G+K+ + A W EMKEME++
Sbjct: 437 FYDMKRKGIQPDIITYTVLLDSYSKRNLRRVHSPLGASGDKEERMNAFTLWTEMKEMEIR 496
Query: 378 PDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTL 557
PDVICYT LID CK+DNLQDA +LFDEM GL PDTVTYTALLSG C GD+DK TL
Sbjct: 497 PDVICYTVLIDRQCKTDNLQDAIALFDEMTNRGLEPDTVTYTALLSGCCNRGDVDKAVTL 556
Query: 558 VNEMESKGIQPDSRTMSTIDRGIARAKKMQFR 653
VNEM SKGIQPDS T+ + GI +AKK+QFR
Sbjct: 557 VNEMSSKGIQPDSHTLLVLQHGILKAKKVQFR 588
Score = 100 bits (248), Expect = 2e-18
Identities = 61/191 (31%), Positives = 94/191 (49%)
Frame = +3
Query: 42 LISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDLFSDMKKRG 221
L++ L G + A Y + GLSP+ TY I++ G C L EA+D+F +M+K G
Sbjct: 27 LMNRLIEHGKVDMAVAIYKQLKRIGLSPNDYTYAIVIKGLCKKGSLEEAVDVFQEMEKAG 86
Query: 222 IGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELKPDVICYTA 401
+ P YT ++GLC +Q V Q + + DV Y
Sbjct: 87 VTPSAFAYTAYIEGLCTNRKSDLGYQ--------VLQACNG-------ANVHIDVYAYNT 131
Query: 402 LIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLVNEMESKG 581
+I C +A S+F +M + G++PD+ TY A++ GYCK+ + K TL N+M SKG
Sbjct: 132 VIRGFCDEMKFDEAESIFLDMEKRGVVPDSYTYGAIICGYCKNRFLLKALTLHNDMVSKG 191
Query: 582 IQPDSRTMSTI 614
I+ + +S I
Sbjct: 192 IKTNCVIVSFI 202
Score = 91.7 bits (226), Expect = 8e-16
Identities = 67/251 (26%), Positives = 107/251 (42%), Gaps = 38/251 (15%)
Frame = +3
Query: 9 GDGPSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSP--------------------- 125
G P+ Y +I LC+ G ++ A + M G++P
Sbjct: 51 GLSPNDYTYAIVIKGLCKKGSLEEAVDVFQEMEKAGVTPSAFAYTAYIEGLCTNRKSDLG 110
Query: 126 --------------DIITYTIMLNGYCHVNCLREALDLFSDMKKRGIGPDIITYTVLLDG 263
D+ Y ++ G+C EA +F DM+KRG+ PD TY ++ G
Sbjct: 111 YQVLQACNGANVHIDVYAYNTVIRGFCDEMKFDEAESIFLDMEKRGVVPDSYTYGAIICG 170
Query: 264 LCK--VSMKRARFQNDAEGNK-KVKQVASAFWCEMKEMELKPDVICYTALIDSHCKSDNL 434
CK +K ND K V +F + ++ YT LI +C N+
Sbjct: 171 YCKNRFLLKALTLHNDMVSKGIKTNCVIVSFILQCMY------IMHYTTLIKGYCLQGNV 224
Query: 435 QDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLVNEMESKGIQPDSRTMSTI 614
+A +L +EM E GL PD TY L +G+ ++G + L++ MES+G +PDS T + I
Sbjct: 225 VNAVNLLEEMKEKGLKPDITTYNVLAAGFSRNGLGAEALDLLDYMESQGFKPDSVTHNMI 284
Query: 615 DRGIARAKKMQ 647
+ K++
Sbjct: 285 IENLCIGGKVK 295
Score = 90.9 bits (224), Expect = 1e-15
Identities = 61/245 (24%), Positives = 100/245 (40%), Gaps = 51/245 (20%)
Frame = +3
Query: 33 YGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDLFSDMK 212
Y LI C G++ A + M KGL PDI TY ++ G+ EALDL M+
Sbjct: 211 YTTLIKGYCLQGNVVNAVNLLEEMKEKGLKPDITTYNVLAAGFSRNGLGAEALDLLDYME 270
Query: 213 KRGIGPDIITYTVLLDGLC---KVSMKRARFQNDAEGNKKVKQVASAFWCEMKE------ 365
+G PD +T+ ++++ LC KV A ++ + + +CE K+
Sbjct: 271 SQGFKPDSVTHNMIIENLCIGGKVKQAEAFVKSLEYKSVDTYSAMISGYCEAKDTRKAYE 330
Query: 366 ------------------------------------------MELKPDVICYTALIDSHC 419
+ ++P Y +I S C
Sbjct: 331 LLIRLAKGGTLVKKGVCFKVLSNLCVEGDNDRAILLLESMLALNVEPRKTMYNKVIASLC 390
Query: 420 KSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLVNEMESKGIQPDSR 599
K+ ++ A FD ++E G PD + YT L++ YC+ + + L +M+ KGIQPD
Sbjct: 391 KAGEVKKAHWFFDTLVERGFTPDVINYTMLINSYCRVNCLREAHDLFYDMKRKGIQPDII 450
Query: 600 TMSTI 614
T + +
Sbjct: 451 TYTVL 455
Score = 58.5 bits (140), Expect = 8e-06
Identities = 39/153 (25%), Positives = 67/153 (43%)
Frame = +3
Query: 183 EALDLFSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMK 362
EA+D+ K+RG P + T L++ L + + KV +A A + ++K
Sbjct: 4 EAIDVLFQTKRRGFVPHVFTSNFLMNRLIE--------------HGKV-DMAVAIYKQLK 48
Query: 363 EMELKPDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMD 542
+ L P+ Y +I CK +L++A +F EM + G+ P YTA + G C + D
Sbjct: 49 RIGLSPNDYTYAIVIKGLCKKGSLEEAVDVFQEMEKAGVTPSAFAYTAYIEGLCTNRKSD 108
Query: 543 KVDTLVNEMESKGIQPDSRTMSTIDRGIARAKK 641
++ + D +T+ RG K
Sbjct: 109 LGYQVLQACNGANVHIDVYAYNTVIRGFCDEMK 141
>ref|XP_006348737.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial-like isoform X1 [Solanum tuberosum]
Length = 829
Score = 266 bits (681), Expect = 1e-68
Identities = 131/221 (59%), Positives = 163/221 (73%), Gaps = 1/221 (0%)
Frame = +3
Query: 3 SSGDGPSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLR 182
S GDG K M KLI++LC AGDMKRARW +D++V +GL+PD++ YT+MLNGYC VN L+
Sbjct: 599 SLGDGICKIMCSKLIASLCSAGDMKRARWVFDNLVWRGLTPDVVIYTMMLNGYCRVNRLQ 658
Query: 183 EALDLFSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQ-VASAFWCEM 359
EA+ LF DMKKRGI PD+ITYTV+LDG K ++KR R +D N +V++ S FW EM
Sbjct: 659 EAIYLFDDMKKRGISPDVITYTVMLDGHSK-NLKRDRLSSDTSRNDRVRRDTGSVFWSEM 717
Query: 360 KEMELKPDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDM 539
MEL DVICYT LIDSHCKSDN+ DA LF EMI+ GL PD+VTYTAL+ GYCK G +
Sbjct: 718 NGMELTADVICYTVLIDSHCKSDNIDDAIHLFTEMIDRGLEPDSVTYTALICGYCKQGHV 777
Query: 540 DKVDTLVNEMESKGIQPDSRTMSTIDRGIARAKKMQFRH*N 662
+ LVN+M KGIQPDS T++ + GI +AKK+ RH N
Sbjct: 778 EMAKELVNDMWRKGIQPDSHTIAALHHGIIKAKKLHLRHNN 818
Score = 115 bits (288), Expect = 5e-23
Identities = 63/203 (31%), Positives = 105/203 (51%)
Frame = +3
Query: 18 PSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDL 197
P YG +I+ C G++ +A +D M +G+ + + +++L C R+A+D
Sbjct: 328 PDAVSYGAVINGYCTTGNISKALAFHDKMETRGIKSNCVIVSLILQCLCKNGKARDAVDQ 387
Query: 198 FSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELK 377
FS KK+GI D + Y ++D LCK+ RF+ A EMK+ +
Sbjct: 388 FSSFKKKGIFLDEVAYNGVIDALCKLG----RFEE-----------AEKLLDEMKDKRMT 432
Query: 378 PDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTL 557
PD++ YT LI+ +C + DA LFDEM E GL PD +TY L G+ ++G + + L
Sbjct: 433 PDIVHYTTLINGYCLHGQILDAMGLFDEMKEKGLKPDIITYNVLAGGFSRNGLVKEAIHL 492
Query: 558 VNEMESKGIQPDSRTMSTIDRGI 626
++ M+ + + P + T + I G+
Sbjct: 493 LDHMKGQKLMPTTVTHNVIIEGL 515
Score = 101 bits (252), Expect = 8e-19
Identities = 58/200 (29%), Positives = 95/200 (47%)
Frame = +3
Query: 33 YGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDLFSDMK 212
Y +I ++ A M +G+ PD ++Y ++NGYC + +AL M+
Sbjct: 298 YTAVIRGFVNEKKLQEAEMVLLDMEEQGMVPDAVSYGAVINGYCTTGNISKALAFHDKME 357
Query: 213 KRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELKPDVIC 392
RGI + + +++L LCK N K + F K+ + D +
Sbjct: 358 TRGIKSNCVIVSLILQCLCK--------------NGKARDAVDQF-SSFKKKGIFLDEVA 402
Query: 393 YTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLVNEME 572
Y +ID+ CK ++A L DEM + + PD V YT L++GYC HG + L +EM+
Sbjct: 403 YNGVIDALCKLGRFEEAEKLLDEMKDKRMTPDIVHYTTLINGYCLHGQILDAMGLFDEMK 462
Query: 573 SKGIQPDSRTMSTIDRGIAR 632
KG++PD T + + G +R
Sbjct: 463 EKGLKPDIITYNVLAGGFSR 482
Score = 92.8 bits (229), Expect = 4e-16
Identities = 71/273 (26%), Positives = 118/273 (43%), Gaps = 51/273 (18%)
Frame = +3
Query: 33 YGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDLFSDMK 212
Y LI+ C G + A +D M KGL PDIITY ++ G+ ++EA+ L MK
Sbjct: 438 YTTLINGYCLHGQILDAMGLFDEMKEKGLKPDIITYNVLAGGFSRNGLVKEAIHLLDHMK 497
Query: 213 KRGIGPDIITYTVLLDGLCKVSM-KRARFQNDAEGNKKVKQVASAF--WCEM-------- 359
+ + P +T+ V+++GLC K A ++ NK + A+ +CE+
Sbjct: 498 GQKLMPTTVTHNVIIEGLCIGGYGKEAEIFFNSLENKSAENYAAMVNGYCELGNTKDAFE 557
Query: 360 -------------KEMELK------------------------PDVICY---TALIDSHC 419
++ LK D IC + LI S C
Sbjct: 558 LFVRLSKQGVLIKRKSRLKLLSSLCLEGEYGKALKLFEIVLSLGDGICKIMCSKLIASLC 617
Query: 420 KSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLVNEMESKGIQPDSR 599
+ +++ A +FD ++ GL PD V YT +L+GYC+ + + L ++M+ +GI PD
Sbjct: 618 SAGDMKRARWVFDNLVWRGLTPDVVIYTMMLNGYCRVNRLQEAIYLFDDMKKRGISPDVI 677
Query: 600 TMSTIDRGIARAKKMQFRH*NPCNSHHCRYSTG 698
T + + G ++ K + + R TG
Sbjct: 678 TYTVMLDGHSKNLKRDRLSSDTSRNDRVRRDTG 710
Score = 92.0 bits (227), Expect = 6e-16
Identities = 58/202 (28%), Positives = 96/202 (47%)
Frame = +3
Query: 9 GDGPSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREA 188
G G S L++ L G + A Y + +SP++ TY I++ C EA
Sbjct: 185 GFGLSVLSCNYLMNRLVECGKVDMAVAVYKQLKRISVSPNVYTYGIVIKALCRKGNFEEA 244
Query: 189 LDLFSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEM 368
+ +F +M+K G P+ TY+ ++GLC G + W K +
Sbjct: 245 VGVFEEMEKAGETPNEFTYSTYIEGLCLY------------GRSDLGYDVLRAW---KGV 289
Query: 369 ELKPDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKV 548
L DV YTA+I LQ+A + +M E G++PD V+Y A+++GYC G++ K
Sbjct: 290 NLPLDVYAYTAVIRGFVNEKKLQEAEMVLLDMEEQGMVPDAVSYGAVINGYCTTGNISKA 349
Query: 549 DTLVNEMESKGIQPDSRTMSTI 614
++ME++GI+ + +S I
Sbjct: 350 LAFHDKMETRGIKSNCVIVSLI 371
Score = 89.7 bits (221), Expect = 3e-15
Identities = 54/184 (29%), Positives = 89/184 (48%)
Frame = +3
Query: 33 YGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDLFSDMK 212
Y +I ALC+ G + A D M +K ++PDI+ YT ++NGYC + +A+ LF +MK
Sbjct: 403 YNGVIDALCKLGRFEEAEKLLDEMKDKRMTPDIVHYTTLINGYCLHGQILDAMGLFDEMK 462
Query: 213 KRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELKPDVIC 392
++G+ PDIITY VL G + N VK+ A MK +L P +
Sbjct: 463 EKGLKPDIITYNVLAGGFSR--------------NGLVKE-AIHLLDHMKGQKLMPTTVT 507
Query: 393 YTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLVNEME 572
+ +I+ C ++A F+ + Y A+++GYC+ G+ L +
Sbjct: 508 HNVIIEGLCIGGYGKEAEIFFNSLEN----KSAENYAAMVNGYCELGNTKDAFELFVRLS 563
Query: 573 SKGI 584
+G+
Sbjct: 564 KQGV 567
Score = 64.7 bits (156), Expect = 1e-07
Identities = 31/101 (30%), Positives = 56/101 (55%)
Frame = +3
Query: 33 YGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDLFSDMK 212
Y LI + C++ ++ A + M+++GL PD +TYT ++ GYC + A +L +DM
Sbjct: 729 YTVLIDSHCKSDNIDDAIHLFTEMIDRGLEPDSVTYTALICGYCKQGHVEMAKELVNDMW 788
Query: 213 KRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQV 335
++GI PD T L G+ K R N++ N++++ +
Sbjct: 789 RKGIQPDSHTIAALHHGIIKAKKLHLRHNNNSAQNRRLQVI 829
Score = 62.0 bits (149), Expect = 7e-07
Identities = 38/167 (22%), Positives = 76/167 (45%)
Frame = +3
Query: 147 MLNGYCHVNCLREALDLFSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKV 326
++ Y + EA+D+ K+ G G +++ L++ L + KV
Sbjct: 161 LVKAYASLRMFDEAIDVLFQTKRCGFGLSVLSCNYLMNRLVECG--------------KV 206
Query: 327 KQVASAFWCEMKEMELKPDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTA 506
+A A + ++K + + P+V Y +I + C+ N ++A +F+EM + G P+ TY+
Sbjct: 207 -DMAVAVYKQLKRISVSPNVYTYGIVIKALCRKGNFEEAVGVFEEMEKAGETPNEFTYST 265
Query: 507 LLSGYCKHGDMDKVDTLVNEMESKGIQPDSRTMSTIDRGIARAKKMQ 647
+ G C +G D ++ + + D + + RG KK+Q
Sbjct: 266 YIEGLCLYGRSDLGYDVLRAWKGVNLPLDVYAYTAVIRGFVNEKKLQ 312
>ref|XP_004293847.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 307
Score = 258 bits (660), Expect = 4e-66
Identities = 125/214 (58%), Positives = 160/214 (74%), Gaps = 1/214 (0%)
Frame = +3
Query: 18 PSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDL 197
P MY KLI++LC+AG++++AR + V +G +PD + YT+M+N YC N LREA DL
Sbjct: 94 PKTIMYSKLIASLCQAGEVQKARQFFYSSVERGFTPDAVDYTVMINSYCRENSLREAHDL 153
Query: 198 FSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAF-WCEMKEMEL 374
F DMKKRGI PDIITYTVLLDG K +++R R DA GN++ AS W EMK++ +
Sbjct: 154 FHDMKKRGIQPDIITYTVLLDGFSKRNIRRVRSPLDARGNREEMADASTILWTEMKQLGI 213
Query: 375 KPDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDT 554
+PD ICYT L+D HCK+DNL+DA +LFD MIE GL PDTVTYTALLSG CK GD+D+ T
Sbjct: 214 QPDAICYTVLVDRHCKADNLRDAIALFDVMIERGLKPDTVTYTALLSGCCKRGDVDRAVT 273
Query: 555 LVNEMESKGIQPDSRTMSTIDRGIARAKKMQFRH 656
LVNEM S+GIQPD+ T+S + GI +AKK+QFR+
Sbjct: 274 LVNEMSSRGIQPDAYTLSVLQHGILKAKKVQFRN 307
Score = 94.7 bits (234), Expect = 1e-16
Identities = 62/189 (32%), Positives = 91/189 (48%), Gaps = 16/189 (8%)
Frame = +3
Query: 9 GDGPSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYC--HVNCLR 182
G P Y +I++ CR ++ A + M +G+ PDIITYT++L+G+ ++ +R
Sbjct: 126 GFTPDAVDYTVMINSYCRENSLREAHDLFHDMKKRGIQPDIITYTVLLDGFSKRNIRRVR 185
Query: 183 EALD--------------LFSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNK 320
LD L+++MK+ GI PD I YTVL+D CK R
Sbjct: 186 SPLDARGNREEMADASTILWTEMKQLGIQPDAICYTVLVDRHCKADNLRD---------- 235
Query: 321 KVKQVASAFWCEMKEMELKPDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTY 500
A A + M E LKPD + YTAL+ CK ++ A +L +EM G+ PD T
Sbjct: 236 -----AIALFDVMIERGLKPDTVTYTALLSGCCKRGDVDRAVTLVNEMSSRGIQPDAYTL 290
Query: 501 TALLSGYCK 527
+ L G K
Sbjct: 291 SVLQHGILK 299
Score = 88.6 bits (218), Expect = 7e-15
Identities = 54/197 (27%), Positives = 92/197 (46%)
Frame = +3
Query: 42 LISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDLFSDMKKRG 221
+I LC G +K A+ +++V+K TYT ++ GYC N R+A +L S + K G
Sbjct: 2 VIENLCIGGKVKEAKAFLNNLVDKSEE----TYTALVRGYCEANKTRKAYELISKLAKHG 57
Query: 222 IGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELKPDVICYTA 401
+ G C + + D A + M + ++P I Y+
Sbjct: 58 ---------TINKGACFKVLSNLCMEGD-------NVRAILLFQRMFALNVEPKTIMYSK 101
Query: 402 LIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLVNEMESKG 581
LI S C++ +Q A F +E G PD V YT +++ YC+ + + L ++M+ +G
Sbjct: 102 LIASLCQAGEVQKARQFFYSSVERGFTPDAVDYTVMINSYCRENSLREAHDLFHDMKKRG 161
Query: 582 IQPDSRTMSTIDRGIAR 632
IQPD T + + G ++
Sbjct: 162 IQPDIITYTVLLDGFSK 178
Score = 66.6 bits (161), Expect = 3e-08
Identities = 35/98 (35%), Positives = 55/98 (56%)
Frame = +3
Query: 9 GDGPSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREA 188
G P Y L+ C+A +++ A +D M+ +GL PD +TYT +L+G C + A
Sbjct: 212 GIQPDAICYTVLVDRHCKADNLRDAIALFDVMIERGLKPDTVTYTALLSGCCKRGDVDRA 271
Query: 189 LDLFSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQN 302
+ L ++M RGI PD T +VL G+ K K+ +F+N
Sbjct: 272 VTLVNEMSSRGIQPDAYTLSVLQHGILKA--KKVQFRN 307
>ref|XP_006579638.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial-like [Glycine max]
Length = 801
Score = 238 bits (607), Expect = 5e-60
Identities = 114/211 (54%), Positives = 154/211 (72%)
Frame = +3
Query: 18 PSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDL 197
PSK MY K+++ALC+AGDMK AR +D V++G +PD++TYTIM+N YC +NCL+EA DL
Sbjct: 591 PSKIMYSKILAALCQAGDMKNARTLFDVFVHRGFTPDVVTYTIMINSYCRMNCLQEAHDL 650
Query: 198 FSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELK 377
F DMK+RGI PD+IT+TVLLDG K + + RF + + K S +M++M++
Sbjct: 651 FQDMKRRGIKPDVITFTVLLDGSLKEYLGK-RFSSHGK-RKTTSLYVSTILRDMEQMKIN 708
Query: 378 PDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTL 557
PDV+CYT L+D H K+DN Q A SLFD+MIE GL PDT+TYTAL+SG C G ++K TL
Sbjct: 709 PDVVCYTVLMDGHMKTDNFQQAVSLFDKMIESGLEPDTITYTALVSGLCNRGHVEKAVTL 768
Query: 558 VNEMESKGIQPDSRTMSTIDRGIARAKKMQF 650
+NEM SKG+ PD +S + RGI +A+K+QF
Sbjct: 769 LNEMSSKGMTPDVHIISALKRGIIKARKVQF 799
Score = 100 bits (249), Expect = 2e-18
Identities = 61/209 (29%), Positives = 104/209 (49%)
Frame = +3
Query: 18 PSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDL 197
P +Y LI C++ ++ RA +D M+++G+ + + + +L+ + E +D
Sbjct: 315 PDVYVYSSLIHGYCKSHNLLRALALHDEMISRGVKTNCVVVSCILHCLGEMGMTLEVVDQ 374
Query: 198 FSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELK 377
F ++K+ G+ D + Y ++ D LC + KV+ EMK L
Sbjct: 375 FKELKESGMFLDGVAYNIVFDALCMLG--------------KVEDAVEMVE-EMKSKRLG 419
Query: 378 PDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTL 557
DV YT LI+ +C +L A ++F EM E GL PD VTY L +G ++G + L
Sbjct: 420 LDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLKPDIVTYNVLAAGLSRNGHARETVKL 479
Query: 558 VNEMESKGIQPDSRTMSTIDRGIARAKKM 644
++ MES+G++P+S T I G+ K+
Sbjct: 480 LDFMESQGMKPNSTTHKMIIEGLCSGGKV 508
Score = 97.8 bits (242), Expect = 1e-17
Identities = 66/260 (25%), Positives = 113/260 (43%), Gaps = 55/260 (21%)
Frame = +3
Query: 18 PSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSP------------------------ 125
P+ Y +I ALC+ GD+K+ ++ M G+ P
Sbjct: 210 PNCYTYAIVIKALCKKGDLKQPLCVFEEMERVGVIPHSYCFAAYIEGLCNNHRSDLGYEV 269
Query: 126 -----------DIITYTIMLNGYCHVNCLREALDLFSDMKKRGIGPDIITYTVLLDGLCK 272
++ YT ++ G+C+ L EA +F DM+++G+ PD+ Y+ L+ G CK
Sbjct: 270 LQAFRKGNAPLEVYAYTAVVRGFCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIHGYCK 329
Query: 273 V-SMKRARFQNDAEGNKKVKQVASAFWC-------------------EMKEMELKPDVIC 392
++ RA +D ++ VK C E+KE + D +
Sbjct: 330 SHNLLRALALHDEMISRGVKTNCVVVSCILHCLGEMGMTLEVVDQFKELKESGMFLDGVA 389
Query: 393 YTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLVNEME 572
Y + D+ C ++DA + +EM L D YT L++GYC GD+ + EM+
Sbjct: 390 YNIVFDALCMLGKVEDAVEMVEEMKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMK 449
Query: 573 SKGIQPDSRTMSTIDRGIAR 632
KG++PD T + + G++R
Sbjct: 450 EKGLKPDIVTYNVLAAGLSR 469
Score = 94.0 bits (232), Expect = 2e-16
Identities = 60/251 (23%), Positives = 107/251 (42%), Gaps = 51/251 (20%)
Frame = +3
Query: 15 GPSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALD 194
G K Y LI+ C GD+ A + M KGL PDI+TY ++ G RE +
Sbjct: 419 GLDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLKPDIVTYNVLAAGLSRNGHARETVK 478
Query: 195 LFSDMKKRGIGPDIITYTVLLDGLC---KVSMKRARFQNDAEGNKKVKQVASAFWCE--- 356
L M+ +G+ P+ T+ ++++GLC KV F + + N ++ +CE
Sbjct: 479 LLDFMESQGMKPNSTTHKMIIEGLCSGGKVLEAEVYFNSLEDKNIEIYSAMVNGYCETDL 538
Query: 357 ---------------------------------------------MKEMELKPDVICYTA 401
M ++P I Y+
Sbjct: 539 VKKSYEVFLKLLNQGDMAKKASCFKLLSKLCMTGDIEKAVKLLDRMLLSNVEPSKIMYSK 598
Query: 402 LIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLVNEMESKG 581
++ + C++ ++++A +LFD + G PD VTYT +++ YC+ + + L +M+ +G
Sbjct: 599 ILAALCQAGDMKNARTLFDVFVHRGFTPDVVTYTIMINSYCRMNCLQEAHDLFQDMKRRG 658
Query: 582 IQPDSRTMSTI 614
I+PD T + +
Sbjct: 659 IKPDVITFTVL 669
Score = 85.5 bits (210), Expect = 6e-14
Identities = 49/191 (25%), Positives = 92/191 (48%)
Frame = +3
Query: 42 LISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDLFSDMKKRG 221
L + L G++ +A Y+ + G P+ TY I++ C L++ L +F +M++ G
Sbjct: 183 LFNRLVEHGEVDKALAVYEQLKRFGFIPNCYTYAIVIKALCKKGDLKQPLCVFEEMERVG 242
Query: 222 IGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELKPDVICYTA 401
+ P + ++GLC ++ V AF ++ +V YTA
Sbjct: 243 VIPHSYCFAAYIEGLCNNHRSDLGYE-----------VLQAF----RKGNAPLEVYAYTA 287
Query: 402 LIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLVNEMESKG 581
++ C L +A +FD+M G++PD Y++L+ GYCK ++ + L +EM S+G
Sbjct: 288 VVRGFCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIHGYCKSHNLLRALALHDEMISRG 347
Query: 582 IQPDSRTMSTI 614
++ + +S I
Sbjct: 348 VKTNCVVVSCI 358
Score = 63.9 bits (154), Expect = 2e-07
Identities = 38/178 (21%), Positives = 78/178 (43%)
Frame = +3
Query: 111 KGLSPDIITYTIMLNGYCHVNCLREALDLFSDMKKRGIGPDIITYTVLLDGLCKVSMKRA 290
+G+ PD++T + N + +AL ++ +K+ G P+ TY +++ LCK
Sbjct: 171 RGILPDVLTCNFLFNRLVEHGEVDKALAVYEQLKRFGFIPNCYTYAIVIKALCKKG---- 226
Query: 291 RFQNDAEGNKKVKQVASAFWCEMKEMELKPDVICYTALIDSHCKSDNLQDASSLFDEMIE 470
+KQ F EM+ + + P C+ A I+ C + + +
Sbjct: 227 ----------DLKQPLCVFE-EMERVGVIPHSYCFAAYIEGLCNNHRSDLGYEVLQAFRK 275
Query: 471 HGLLPDTVTYTALLSGYCKHGDMDKVDTLVNEMESKGIQPDSRTMSTIDRGIARAKKM 644
+ YTA++ G+C +D+ + ++ME +G+ PD S++ G ++ +
Sbjct: 276 GNAPLEVYAYTAVVRGFCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIHGYCKSHNL 333
>gb|EOX92409.1| Pentatricopeptide repeat-containing protein, putative isoform 3
[Theobroma cacao]
Length = 784
Score = 236 bits (602), Expect = 2e-59
Identities = 114/196 (58%), Positives = 150/196 (76%)
Frame = +3
Query: 18 PSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDL 197
P+K MY KLI A C+AG++ A+ ++ M+ KGL+PD++TYTIM+NGYC V L++ALDL
Sbjct: 575 PTKLMYCKLIGAFCQAGNLSIAQLLFNIMIKKGLTPDLVTYTIMINGYCKVKLLQKALDL 634
Query: 198 FSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELK 377
F++MK+RGI PD+ITYTVLL+ K++++ + + N K VAS FW EMK M ++
Sbjct: 635 FNNMKERGIKPDVITYTVLLNSHMKMNLRSLSNPDVTQKNGKTIMVASPFWSEMKHMGVE 694
Query: 378 PDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTL 557
PDV+CYT LID CK++NLQDAS +FDEMI+ GL PDTVTYTAL+SGY K G +DK TL
Sbjct: 695 PDVVCYTVLIDQFCKTNNLQDASRIFDEMIDRGLEPDTVTYTALISGYFKGGYIDKAVTL 754
Query: 558 VNEMESKGIQPDSRTM 605
VNE+ SKGIQPD+ TM
Sbjct: 755 VNELLSKGIQPDTHTM 770
Score = 110 bits (274), Expect = 2e-21
Identities = 65/215 (30%), Positives = 110/215 (51%)
Frame = +3
Query: 3 SSGDGPSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLR 182
++G P YG LI C+ G++ +A + MV+KG+ + + T +L C +
Sbjct: 294 NNGVVPDVTSYGALIRGYCKCGNILKALDIHHEMVSKGIKTNCVILTSILQSLCQMGLDF 353
Query: 183 EALDLFSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMK 362
+A++ F + + GI D + + V+ D LCK E KK+ EMK
Sbjct: 354 KAVNQFKEFRDIGIFLDEVCHNVIADALCK--------GGQVEEAKKLLD-------EMK 398
Query: 363 EMELKPDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMD 542
++ PDVI YT LI+ +C+ ++DA +LF EM +G PD V Y+ L G ++G
Sbjct: 399 GKQISPDVINYTTLINGYCRQGKVEDAWNLFKEMKNNGHKPDIVFYSVLAGGLARNGHAQ 458
Query: 543 KVDTLVNEMESKGIQPDSRTMSTIDRGIARAKKMQ 647
K L+N ME++G++ D+ + I +G+ K++
Sbjct: 459 KAVDLLNSMEAQGLKCDTVIHNMIIKGLCMGDKVK 493
Score = 89.0 bits (219), Expect = 5e-15
Identities = 72/253 (28%), Positives = 111/253 (43%), Gaps = 51/253 (20%)
Frame = +3
Query: 42 LISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDLFSDMKKRG 221
+ ALC+ G ++ A+ D M K +SPD+I YT ++NGYC + +A +LF +MK G
Sbjct: 377 IADALCKGGQVEEAKKLLDEMKGKQISPDVINYTTLINGYCRQGKVEDAWNLFKEMKNNG 436
Query: 222 IGPDIITYTVLLDGLCKV--SMKRARFQN--DAEGNK---KVKQVASAFWC---EMKEME 371
PDI+ Y+VL GL + + K N +A+G K + + C ++KE E
Sbjct: 437 HKPDIVFYSVLAGGLARNGHAQKAVDLLNSMEAQGLKCDTVIHNMIIKGLCMGDKVKEAE 496
Query: 372 LKPDVI---C---YTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHG 533
D + C Y AL+D + ++ ++A LF ++ E G L + + LLS C G
Sbjct: 497 NFLDSLPGKCLENYAALVDGYREACLTKEAFKLFVKLSEQGFLVTKASCSKLLSSLCMKG 556
Query: 534 DMDKV-----------------------------------DTLVNEMESKGIQPDSRTMS 608
D DK L N M KG+ PD T +
Sbjct: 557 DNDKALMLLKIMFSLNAEPTKLMYCKLIGAFCQAGNLSIAQLLFNIMIKKGLTPDLVTYT 616
Query: 609 TIDRGIARAKKMQ 647
+ G + K +Q
Sbjct: 617 IMINGYCKVKLLQ 629
Score = 87.0 bits (214), Expect = 2e-14
Identities = 62/245 (25%), Positives = 105/245 (42%), Gaps = 51/245 (20%)
Frame = +3
Query: 33 YGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDLFSDMK 212
Y LI+ CR G ++ A + M N G PDI+ Y+++ G ++A+DL + M+
Sbjct: 409 YTTLINGYCRQGKVEDAWNLFKEMKNNGHKPDIVFYSVLAGGLARNGHAQKAVDLLNSME 468
Query: 213 KRGIGPDII-------------------------------TYTVLLDGLCKVSMKRARFQ 299
+G+ D + Y L+DG + + + F+
Sbjct: 469 AQGLKCDTVIHNMIIKGLCMGDKVKEAENFLDSLPGKCLENYAALVDGYREACLTKEAFK 528
Query: 300 NDAEGNKKVKQVASAFWCE--------------------MKEMELKPDVICYTALIDSHC 419
+ +++ V A + M + +P + Y LI + C
Sbjct: 529 LFVKLSEQGFLVTKASCSKLLSSLCMKGDNDKALMLLKIMFSLNAEPTKLMYCKLIGAFC 588
Query: 420 KSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLVNEMESKGIQPDSR 599
++ NL A LF+ MI+ GL PD VTYT +++GYCK + K L N M+ +GI+PD
Sbjct: 589 QAGNLSIAQLLFNIMIKKGLTPDLVTYTIMINGYCKVKLLQKALDLFNNMKERGIKPDVI 648
Query: 600 TMSTI 614
T + +
Sbjct: 649 TYTVL 653
Score = 85.1 bits (209), Expect = 8e-14
Identities = 63/260 (24%), Positives = 109/260 (41%), Gaps = 55/260 (21%)
Frame = +3
Query: 18 PSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYC-HVNC------ 176
P+ Y LI ALC+ G ++ A + M + P+ YT + G C H
Sbjct: 194 PNDYTYSILIKALCKKGSLEEAFNVFREMEEAEVRPNAFAYTTYIEGLCMHGRTELGYEV 253
Query: 177 ----------------------------LREALDLFSDMKKRGIGPDIITYTVLLDGLCK 272
L+ A D+ D + G+ PD+ +Y L+ G CK
Sbjct: 254 LKVCRKAKVPLDPFAYSVVIRGFSKEMKLKVAEDVLFDAENNGVVPDVTSYGALIRGYCK 313
Query: 273 V-SMKRARFQNDAEGNKKVK--------------QVASAF-----WCEMKEMELKPDVIC 392
++ +A + +K +K Q+ F + E +++ + D +C
Sbjct: 314 CGNILKALDIHHEMVSKGIKTNCVILTSILQSLCQMGLDFKAVNQFKEFRDIGIFLDEVC 373
Query: 393 YTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLVNEME 572
+ + D+ CK +++A L DEM + PD + YT L++GYC+ G ++ L EM+
Sbjct: 374 HNVIADALCKGGQVEEAKKLLDEMKGKQISPDVINYTTLINGYCRQGKVEDAWNLFKEMK 433
Query: 573 SKGIQPDSRTMSTIDRGIAR 632
+ G +PD S + G+AR
Sbjct: 434 NNGHKPDIVFYSVLAGGLAR 453
Score = 83.6 bits (205), Expect = 2e-13
Identities = 53/191 (27%), Positives = 93/191 (48%)
Frame = +3
Query: 42 LISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDLFSDMKKRG 221
L++ L G + A Y + GL P+ TY+I++ C L EA ++F +M++
Sbjct: 167 LMNRLIHCGKIDMAVATYQQLKRIGLKPNDYTYSILIKALCKKGSLEEAFNVFREMEEAE 226
Query: 222 IGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELKPDVICYTA 401
+ P+ YT ++GLC E +V +V C ++ L P Y+
Sbjct: 227 VRPNAFAYTTYIEGLC--------MHGRTELGYEVLKV-----CRKAKVPLDP--FAYSV 271
Query: 402 LIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLVNEMESKG 581
+I K L+ A + + +G++PD +Y AL+ GYCK G++ K + +EM SKG
Sbjct: 272 VIRGFSKEMKLKVAEDVLFDAENNGVVPDVTSYGALIRGYCKCGNILKALDIHHEMVSKG 331
Query: 582 IQPDSRTMSTI 614
I+ + +++I
Sbjct: 332 IKTNCVILTSI 342
>gb|EOX92408.1| Pentatricopeptide repeat-containing protein, putative isoform 2
[Theobroma cacao]
Length = 818
Score = 236 bits (602), Expect = 2e-59
Identities = 114/196 (58%), Positives = 150/196 (76%)
Frame = +3
Query: 18 PSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDL 197
P+K MY KLI A C+AG++ A+ ++ M+ KGL+PD++TYTIM+NGYC V L++ALDL
Sbjct: 601 PTKLMYCKLIGAFCQAGNLSIAQLLFNIMIKKGLTPDLVTYTIMINGYCKVKLLQKALDL 660
Query: 198 FSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELK 377
F++MK+RGI PD+ITYTVLL+ K++++ + + N K VAS FW EMK M ++
Sbjct: 661 FNNMKERGIKPDVITYTVLLNSHMKMNLRSLSNPDVTQKNGKTIMVASPFWSEMKHMGVE 720
Query: 378 PDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTL 557
PDV+CYT LID CK++NLQDAS +FDEMI+ GL PDTVTYTAL+SGY K G +DK TL
Sbjct: 721 PDVVCYTVLIDQFCKTNNLQDASRIFDEMIDRGLEPDTVTYTALISGYFKGGYIDKAVTL 780
Query: 558 VNEMESKGIQPDSRTM 605
VNE+ SKGIQPD+ TM
Sbjct: 781 VNELLSKGIQPDTHTM 796
Score = 110 bits (274), Expect = 2e-21
Identities = 65/215 (30%), Positives = 110/215 (51%)
Frame = +3
Query: 3 SSGDGPSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLR 182
++G P YG LI C+ G++ +A + MV+KG+ + + T +L C +
Sbjct: 320 NNGVVPDVTSYGALIRGYCKCGNILKALDIHHEMVSKGIKTNCVILTSILQSLCQMGLDF 379
Query: 183 EALDLFSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMK 362
+A++ F + + GI D + + V+ D LCK E KK+ EMK
Sbjct: 380 KAVNQFKEFRDIGIFLDEVCHNVIADALCK--------GGQVEEAKKLLD-------EMK 424
Query: 363 EMELKPDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMD 542
++ PDVI YT LI+ +C+ ++DA +LF EM +G PD V Y+ L G ++G
Sbjct: 425 GKQISPDVINYTTLINGYCRQGKVEDAWNLFKEMKNNGHKPDIVFYSVLAGGLARNGHAQ 484
Query: 543 KVDTLVNEMESKGIQPDSRTMSTIDRGIARAKKMQ 647
K L+N ME++G++ D+ + I +G+ K++
Sbjct: 485 KAVDLLNSMEAQGLKCDTVIHNMIIKGLCMGDKVK 519
Score = 89.0 bits (219), Expect = 5e-15
Identities = 72/253 (28%), Positives = 111/253 (43%), Gaps = 51/253 (20%)
Frame = +3
Query: 42 LISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDLFSDMKKRG 221
+ ALC+ G ++ A+ D M K +SPD+I YT ++NGYC + +A +LF +MK G
Sbjct: 403 IADALCKGGQVEEAKKLLDEMKGKQISPDVINYTTLINGYCRQGKVEDAWNLFKEMKNNG 462
Query: 222 IGPDIITYTVLLDGLCKV--SMKRARFQN--DAEGNK---KVKQVASAFWC---EMKEME 371
PDI+ Y+VL GL + + K N +A+G K + + C ++KE E
Sbjct: 463 HKPDIVFYSVLAGGLARNGHAQKAVDLLNSMEAQGLKCDTVIHNMIIKGLCMGDKVKEAE 522
Query: 372 LKPDVI---C---YTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHG 533
D + C Y AL+D + ++ ++A LF ++ E G L + + LLS C G
Sbjct: 523 NFLDSLPGKCLENYAALVDGYREACLTKEAFKLFVKLSEQGFLVTKASCSKLLSSLCMKG 582
Query: 534 DMDKV-----------------------------------DTLVNEMESKGIQPDSRTMS 608
D DK L N M KG+ PD T +
Sbjct: 583 DNDKALMLLKIMFSLNAEPTKLMYCKLIGAFCQAGNLSIAQLLFNIMIKKGLTPDLVTYT 642
Query: 609 TIDRGIARAKKMQ 647
+ G + K +Q
Sbjct: 643 IMINGYCKVKLLQ 655
Score = 87.0 bits (214), Expect = 2e-14
Identities = 62/245 (25%), Positives = 105/245 (42%), Gaps = 51/245 (20%)
Frame = +3
Query: 33 YGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDLFSDMK 212
Y LI+ CR G ++ A + M N G PDI+ Y+++ G ++A+DL + M+
Sbjct: 435 YTTLINGYCRQGKVEDAWNLFKEMKNNGHKPDIVFYSVLAGGLARNGHAQKAVDLLNSME 494
Query: 213 KRGIGPDII-------------------------------TYTVLLDGLCKVSMKRARFQ 299
+G+ D + Y L+DG + + + F+
Sbjct: 495 AQGLKCDTVIHNMIIKGLCMGDKVKEAENFLDSLPGKCLENYAALVDGYREACLTKEAFK 554
Query: 300 NDAEGNKKVKQVASAFWCE--------------------MKEMELKPDVICYTALIDSHC 419
+ +++ V A + M + +P + Y LI + C
Sbjct: 555 LFVKLSEQGFLVTKASCSKLLSSLCMKGDNDKALMLLKIMFSLNAEPTKLMYCKLIGAFC 614
Query: 420 KSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLVNEMESKGIQPDSR 599
++ NL A LF+ MI+ GL PD VTYT +++GYCK + K L N M+ +GI+PD
Sbjct: 615 QAGNLSIAQLLFNIMIKKGLTPDLVTYTIMINGYCKVKLLQKALDLFNNMKERGIKPDVI 674
Query: 600 TMSTI 614
T + +
Sbjct: 675 TYTVL 679
Score = 85.1 bits (209), Expect = 8e-14
Identities = 63/260 (24%), Positives = 109/260 (41%), Gaps = 55/260 (21%)
Frame = +3
Query: 18 PSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYC-HVNC------ 176
P+ Y LI ALC+ G ++ A + M + P+ YT + G C H
Sbjct: 220 PNDYTYSILIKALCKKGSLEEAFNVFREMEEAEVRPNAFAYTTYIEGLCMHGRTELGYEV 279
Query: 177 ----------------------------LREALDLFSDMKKRGIGPDIITYTVLLDGLCK 272
L+ A D+ D + G+ PD+ +Y L+ G CK
Sbjct: 280 LKVCRKAKVPLDPFAYSVVIRGFSKEMKLKVAEDVLFDAENNGVVPDVTSYGALIRGYCK 339
Query: 273 V-SMKRARFQNDAEGNKKVK--------------QVASAF-----WCEMKEMELKPDVIC 392
++ +A + +K +K Q+ F + E +++ + D +C
Sbjct: 340 CGNILKALDIHHEMVSKGIKTNCVILTSILQSLCQMGLDFKAVNQFKEFRDIGIFLDEVC 399
Query: 393 YTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLVNEME 572
+ + D+ CK +++A L DEM + PD + YT L++GYC+ G ++ L EM+
Sbjct: 400 HNVIADALCKGGQVEEAKKLLDEMKGKQISPDVINYTTLINGYCRQGKVEDAWNLFKEMK 459
Query: 573 SKGIQPDSRTMSTIDRGIAR 632
+ G +PD S + G+AR
Sbjct: 460 NNGHKPDIVFYSVLAGGLAR 479
Score = 83.6 bits (205), Expect = 2e-13
Identities = 53/191 (27%), Positives = 93/191 (48%)
Frame = +3
Query: 42 LISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDLFSDMKKRG 221
L++ L G + A Y + GL P+ TY+I++ C L EA ++F +M++
Sbjct: 193 LMNRLIHCGKIDMAVATYQQLKRIGLKPNDYTYSILIKALCKKGSLEEAFNVFREMEEAE 252
Query: 222 IGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELKPDVICYTA 401
+ P+ YT ++GLC E +V +V C ++ L P Y+
Sbjct: 253 VRPNAFAYTTYIEGLC--------MHGRTELGYEVLKV-----CRKAKVPLDP--FAYSV 297
Query: 402 LIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLVNEMESKG 581
+I K L+ A + + +G++PD +Y AL+ GYCK G++ K + +EM SKG
Sbjct: 298 VIRGFSKEMKLKVAEDVLFDAENNGVVPDVTSYGALIRGYCKCGNILKALDIHHEMVSKG 357
Query: 582 IQPDSRTMSTI 614
I+ + +++I
Sbjct: 358 IKTNCVILTSI 368
>gb|EOX92407.1| Pentatricopeptide repeat-containing protein, putative isoform 1
[Theobroma cacao]
Length = 792
Score = 236 bits (602), Expect = 2e-59
Identities = 114/196 (58%), Positives = 150/196 (76%)
Frame = +3
Query: 18 PSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDL 197
P+K MY KLI A C+AG++ A+ ++ M+ KGL+PD++TYTIM+NGYC V L++ALDL
Sbjct: 575 PTKLMYCKLIGAFCQAGNLSIAQLLFNIMIKKGLTPDLVTYTIMINGYCKVKLLQKALDL 634
Query: 198 FSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELK 377
F++MK+RGI PD+ITYTVLL+ K++++ + + N K VAS FW EMK M ++
Sbjct: 635 FNNMKERGIKPDVITYTVLLNSHMKMNLRSLSNPDVTQKNGKTIMVASPFWSEMKHMGVE 694
Query: 378 PDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTL 557
PDV+CYT LID CK++NLQDAS +FDEMI+ GL PDTVTYTAL+SGY K G +DK TL
Sbjct: 695 PDVVCYTVLIDQFCKTNNLQDASRIFDEMIDRGLEPDTVTYTALISGYFKGGYIDKAVTL 754
Query: 558 VNEMESKGIQPDSRTM 605
VNE+ SKGIQPD+ TM
Sbjct: 755 VNELLSKGIQPDTHTM 770
Score = 110 bits (274), Expect = 2e-21
Identities = 65/215 (30%), Positives = 110/215 (51%)
Frame = +3
Query: 3 SSGDGPSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLR 182
++G P YG LI C+ G++ +A + MV+KG+ + + T +L C +
Sbjct: 294 NNGVVPDVTSYGALIRGYCKCGNILKALDIHHEMVSKGIKTNCVILTSILQSLCQMGLDF 353
Query: 183 EALDLFSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMK 362
+A++ F + + GI D + + V+ D LCK E KK+ EMK
Sbjct: 354 KAVNQFKEFRDIGIFLDEVCHNVIADALCK--------GGQVEEAKKLLD-------EMK 398
Query: 363 EMELKPDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMD 542
++ PDVI YT LI+ +C+ ++DA +LF EM +G PD V Y+ L G ++G
Sbjct: 399 GKQISPDVINYTTLINGYCRQGKVEDAWNLFKEMKNNGHKPDIVFYSVLAGGLARNGHAQ 458
Query: 543 KVDTLVNEMESKGIQPDSRTMSTIDRGIARAKKMQ 647
K L+N ME++G++ D+ + I +G+ K++
Sbjct: 459 KAVDLLNSMEAQGLKCDTVIHNMIIKGLCMGDKVK 493
Score = 89.0 bits (219), Expect = 5e-15
Identities = 72/253 (28%), Positives = 111/253 (43%), Gaps = 51/253 (20%)
Frame = +3
Query: 42 LISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDLFSDMKKRG 221
+ ALC+ G ++ A+ D M K +SPD+I YT ++NGYC + +A +LF +MK G
Sbjct: 377 IADALCKGGQVEEAKKLLDEMKGKQISPDVINYTTLINGYCRQGKVEDAWNLFKEMKNNG 436
Query: 222 IGPDIITYTVLLDGLCKV--SMKRARFQN--DAEGNK---KVKQVASAFWC---EMKEME 371
PDI+ Y+VL GL + + K N +A+G K + + C ++KE E
Sbjct: 437 HKPDIVFYSVLAGGLARNGHAQKAVDLLNSMEAQGLKCDTVIHNMIIKGLCMGDKVKEAE 496
Query: 372 LKPDVI---C---YTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHG 533
D + C Y AL+D + ++ ++A LF ++ E G L + + LLS C G
Sbjct: 497 NFLDSLPGKCLENYAALVDGYREACLTKEAFKLFVKLSEQGFLVTKASCSKLLSSLCMKG 556
Query: 534 DMDKV-----------------------------------DTLVNEMESKGIQPDSRTMS 608
D DK L N M KG+ PD T +
Sbjct: 557 DNDKALMLLKIMFSLNAEPTKLMYCKLIGAFCQAGNLSIAQLLFNIMIKKGLTPDLVTYT 616
Query: 609 TIDRGIARAKKMQ 647
+ G + K +Q
Sbjct: 617 IMINGYCKVKLLQ 629
Score = 87.0 bits (214), Expect = 2e-14
Identities = 62/245 (25%), Positives = 105/245 (42%), Gaps = 51/245 (20%)
Frame = +3
Query: 33 YGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDLFSDMK 212
Y LI+ CR G ++ A + M N G PDI+ Y+++ G ++A+DL + M+
Sbjct: 409 YTTLINGYCRQGKVEDAWNLFKEMKNNGHKPDIVFYSVLAGGLARNGHAQKAVDLLNSME 468
Query: 213 KRGIGPDII-------------------------------TYTVLLDGLCKVSMKRARFQ 299
+G+ D + Y L+DG + + + F+
Sbjct: 469 AQGLKCDTVIHNMIIKGLCMGDKVKEAENFLDSLPGKCLENYAALVDGYREACLTKEAFK 528
Query: 300 NDAEGNKKVKQVASAFWCE--------------------MKEMELKPDVICYTALIDSHC 419
+ +++ V A + M + +P + Y LI + C
Sbjct: 529 LFVKLSEQGFLVTKASCSKLLSSLCMKGDNDKALMLLKIMFSLNAEPTKLMYCKLIGAFC 588
Query: 420 KSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLVNEMESKGIQPDSR 599
++ NL A LF+ MI+ GL PD VTYT +++GYCK + K L N M+ +GI+PD
Sbjct: 589 QAGNLSIAQLLFNIMIKKGLTPDLVTYTIMINGYCKVKLLQKALDLFNNMKERGIKPDVI 648
Query: 600 TMSTI 614
T + +
Sbjct: 649 TYTVL 653
Score = 85.1 bits (209), Expect = 8e-14
Identities = 63/260 (24%), Positives = 109/260 (41%), Gaps = 55/260 (21%)
Frame = +3
Query: 18 PSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYC-HVNC------ 176
P+ Y LI ALC+ G ++ A + M + P+ YT + G C H
Sbjct: 194 PNDYTYSILIKALCKKGSLEEAFNVFREMEEAEVRPNAFAYTTYIEGLCMHGRTELGYEV 253
Query: 177 ----------------------------LREALDLFSDMKKRGIGPDIITYTVLLDGLCK 272
L+ A D+ D + G+ PD+ +Y L+ G CK
Sbjct: 254 LKVCRKAKVPLDPFAYSVVIRGFSKEMKLKVAEDVLFDAENNGVVPDVTSYGALIRGYCK 313
Query: 273 V-SMKRARFQNDAEGNKKVK--------------QVASAF-----WCEMKEMELKPDVIC 392
++ +A + +K +K Q+ F + E +++ + D +C
Sbjct: 314 CGNILKALDIHHEMVSKGIKTNCVILTSILQSLCQMGLDFKAVNQFKEFRDIGIFLDEVC 373
Query: 393 YTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLVNEME 572
+ + D+ CK +++A L DEM + PD + YT L++GYC+ G ++ L EM+
Sbjct: 374 HNVIADALCKGGQVEEAKKLLDEMKGKQISPDVINYTTLINGYCRQGKVEDAWNLFKEMK 433
Query: 573 SKGIQPDSRTMSTIDRGIAR 632
+ G +PD S + G+AR
Sbjct: 434 NNGHKPDIVFYSVLAGGLAR 453
Score = 83.6 bits (205), Expect = 2e-13
Identities = 53/191 (27%), Positives = 93/191 (48%)
Frame = +3
Query: 42 LISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDLFSDMKKRG 221
L++ L G + A Y + GL P+ TY+I++ C L EA ++F +M++
Sbjct: 167 LMNRLIHCGKIDMAVATYQQLKRIGLKPNDYTYSILIKALCKKGSLEEAFNVFREMEEAE 226
Query: 222 IGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELKPDVICYTA 401
+ P+ YT ++GLC E +V +V C ++ L P Y+
Sbjct: 227 VRPNAFAYTTYIEGLC--------MHGRTELGYEVLKV-----CRKAKVPLDP--FAYSV 271
Query: 402 LIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLVNEMESKG 581
+I K L+ A + + +G++PD +Y AL+ GYCK G++ K + +EM SKG
Sbjct: 272 VIRGFSKEMKLKVAEDVLFDAENNGVVPDVTSYGALIRGYCKCGNILKALDIHHEMVSKG 331
Query: 582 IQPDSRTMSTI 614
I+ + +++I
Sbjct: 332 IKTNCVILTSI 342
>ref|XP_006481070.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial-like isoform X1 [Citrus sinensis]
gi|568854934|ref|XP_006481071.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g26790,
mitochondrial-like isoform X2 [Citrus sinensis]
gi|568854936|ref|XP_006481072.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g26790,
mitochondrial-like isoform X3 [Citrus sinensis]
gi|568854938|ref|XP_006481073.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g26790,
mitochondrial-like isoform X4 [Citrus sinensis]
gi|568854940|ref|XP_006481074.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g26790,
mitochondrial-like isoform X5 [Citrus sinensis]
Length = 831
Score = 234 bits (597), Expect = 8e-59
Identities = 113/213 (53%), Positives = 156/213 (73%)
Frame = +3
Query: 18 PSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDL 197
PSK MY KLI ALC+A +M++A+ +D +V+KGL+P +ITYT+M++GYC +NCLREA D+
Sbjct: 619 PSKSMYDKLIGALCQAEEMEQAQLVFDVLVDKGLTPHLITYTMMIHGYCKINCLREARDV 678
Query: 198 FSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELK 377
F+DMK+RGI PD++TYTVL D K+++K + DA K+ AS FW EMKEM ++
Sbjct: 679 FNDMKQRGITPDVVTYTVLFDAHSKINLKGSSSSPDALQCKEDVVDASVFWNEMKEMGIR 738
Query: 378 PDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTL 557
PDVI YT LI C + NL+D ++F+E+ + GL PDTVTYTALL GY GD+D+ L
Sbjct: 739 PDVISYTVLIAKLCNTQNLEDGITVFNEISDRGLEPDTVTYTALLCGYLAKGDLDRAIAL 798
Query: 558 VNEMESKGIQPDSRTMSTIDRGIARAKKMQFRH 656
V+EM KGIQ D T S+++RGI +A+ +Q+RH
Sbjct: 799 VDEMSVKGIQGDDYTKSSLERGIEKARILQYRH 831
Score = 108 bits (270), Expect = 7e-21
Identities = 65/225 (28%), Positives = 109/225 (48%), Gaps = 20/225 (8%)
Frame = +3
Query: 33 YGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDLFSDMK 212
Y +I C +++A HM +G+ PD+ Y+ +++GYC + +AL L +M
Sbjct: 313 YIVVIRGFCDQNKLEKAECVLLHMEKQGVVPDVYAYSALISGYCKFGKINKALPLHHEMT 372
Query: 213 KRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNK------------------KVKQVA 338
+GI + +V+L GLC+ M A + E K+ +V
Sbjct: 373 SKGIKTNCGVLSVILKGLCRNGMASAAIKQFLEFKDMGFFLDKVCYDIIVDSLCKLGEVE 432
Query: 339 SAF--WCEMKEMELKPDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALL 512
A + EMK+ ++ PDV+ YT +I +C L DA LF EM E G PDT+TY L
Sbjct: 433 KAMILFKEMKDRQIVPDVVNYTTMICGYCFQGKLGDALDLFKEMKEMGHKPDTITYNILA 492
Query: 513 SGYCKHGDMDKVDTLVNEMESKGIQPDSRTMSTIDRGIARAKKMQ 647
+ ++G + K L+N M+ G++P+ T + I G+ +++
Sbjct: 493 GAFAQYGAVQKAFDLLNYMKRHGLEPNFVTHNMIIEGLCMGGRVE 537
Score = 101 bits (251), Expect = 1e-18
Identities = 55/196 (28%), Positives = 97/196 (49%)
Frame = +3
Query: 45 ISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDLFSDMKKRGI 224
++ L G + A Y H+ GLS + TY I++ C ++EA+++F +M+K G+
Sbjct: 212 MNQLVECGKVDMALAVYQHLKRLGLSLNEYTYVIVIKALCKKGSMQEAVEVFLEMEKAGV 271
Query: 225 GPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELKPDVICYTAL 404
P+ Y+ ++GLC M ++ + +E ++ Y +
Sbjct: 272 TPNAFAYSTCIEGLCMNGMLDLGYE---------------LLLKWEEADIPLSAFAYIVV 316
Query: 405 IDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLVNEMESKGI 584
I C + L+ A + M + G++PD Y+AL+SGYCK G ++K L +EM SKGI
Sbjct: 317 IRGFCDQNKLEKAECVLLHMEKQGVVPDVYAYSALISGYCKFGKINKALPLHHEMTSKGI 376
Query: 585 QPDSRTMSTIDRGIAR 632
+ + +S I +G+ R
Sbjct: 377 KTNCGVLSVILKGLCR 392
Score = 92.0 bits (227), Expect = 6e-16
Identities = 66/260 (25%), Positives = 112/260 (43%), Gaps = 55/260 (21%)
Frame = +3
Query: 33 YGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYT----------------------- 143
Y +I ALC+ G M+ A + M G++P+ Y+
Sbjct: 243 YVIVIKALCKKGSMQEAVEVFLEMEKAGVTPNAFAYSTCIEGLCMNGMLDLGYELLLKWE 302
Query: 144 ------------IMLNGYCHVNCLREALDLFSDMKKRGIGPDIITYTVLLDGLCKV-SMK 284
+++ G+C N L +A + M+K+G+ PD+ Y+ L+ G CK +
Sbjct: 303 EADIPLSAFAYIVVIRGFCDQNKLEKAECVLLHMEKQGVVPDVYAYSALISGYCKFGKIN 362
Query: 285 RARFQNDAEGNKKVKQ----------------VASAF---WCEMKEMELKPDVICYTALI 407
+A + +K +K +ASA + E K+M D +CY ++
Sbjct: 363 KALPLHHEMTSKGIKTNCGVLSVILKGLCRNGMASAAIKQFLEFKDMGFFLDKVCYDIIV 422
Query: 408 DSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLVNEMESKGIQ 587
DS CK ++ A LF EM + ++PD V YT ++ GYC G + L EM+ G +
Sbjct: 423 DSLCKLGEVEKAMILFKEMKDRQIVPDVVNYTTMICGYCFQGKLGDALDLFKEMKEMGHK 482
Query: 588 PDSRTMSTIDRGIARAKKMQ 647
PD+ T + + A+ +Q
Sbjct: 483 PDTITYNILAGAFAQYGAVQ 502
Score = 88.6 bits (218), Expect = 7e-15
Identities = 61/283 (21%), Positives = 115/283 (40%), Gaps = 86/283 (30%)
Frame = +3
Query: 24 KKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDLFS 203
K Y ++ +LC+ G++++A + M ++ + PD++ YT M+ GYC L +ALDLF
Sbjct: 415 KVCYDIIVDSLCKLGEVEKAMILFKEMKDRQIVPDVVNYTTMICGYCFQGKLGDALDLFK 474
Query: 204 DMK-----------------------------------KRGIGPDIITYTVLLDGL---- 266
+MK + G+ P+ +T+ ++++GL
Sbjct: 475 EMKEMGHKPDTITYNILAGAFAQYGAVQKAFDLLNYMKRHGLEPNFVTHNMIIEGLCMGG 534
Query: 267 ---------------------------CKVSMKRARFQ------------NDAEGNKKVK 329
CK + FQ + NK +
Sbjct: 535 RVEEAEAFLDGLKGKCLENYSAMINGYCKTGHTKEAFQLFMRLSNQGVLVKKSSCNKLLT 594
Query: 330 QV--------ASAFWCEMKEMELKPDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLP 485
+ A + M + +P Y LI + C+++ ++ A +FD +++ GL P
Sbjct: 595 NLLILRDNNNALKLFKTMITLNAEPSKSMYDKLIGALCQAEEMEQAQLVFDVLVDKGLTP 654
Query: 486 DTVTYTALLSGYCKHGDMDKVDTLVNEMESKGIQPDSRTMSTI 614
+TYT ++ GYCK + + + N+M+ +GI PD T + +
Sbjct: 655 HLITYTMMIHGYCKINCLREARDVFNDMKQRGITPDVVTYTVL 697
>ref|XP_006429438.1| hypothetical protein CICLE_v10011094mg [Citrus clementina]
gi|557531495|gb|ESR42678.1| hypothetical protein
CICLE_v10011094mg [Citrus clementina]
Length = 810
Score = 234 bits (597), Expect = 8e-59
Identities = 113/213 (53%), Positives = 156/213 (73%)
Frame = +3
Query: 18 PSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDL 197
PSK MY KLI ALC+A +M++A+ +D +V+KGL+P +ITYT+M++GYC +NCLREA D+
Sbjct: 598 PSKSMYDKLIGALCQAEEMEQAQLVFDVLVDKGLTPHLITYTMMIHGYCKINCLREARDV 657
Query: 198 FSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELK 377
F+DMK+RGI PD++TYTVL D K+++K + DA K+ AS FW EMKEM ++
Sbjct: 658 FNDMKQRGITPDVVTYTVLFDAHSKINLKGSSSSPDALQCKEDVVDASVFWNEMKEMGIR 717
Query: 378 PDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTL 557
PDVI YT LI C + NL+D ++F+E+ + GL PDTVTYTALL GY GD+D+ L
Sbjct: 718 PDVISYTVLIAKLCNTQNLEDGITVFNEISDRGLEPDTVTYTALLCGYLAKGDLDRAIAL 777
Query: 558 VNEMESKGIQPDSRTMSTIDRGIARAKKMQFRH 656
V+EM KGIQ D T S+++RGI +A+ +Q+RH
Sbjct: 778 VDEMSVKGIQGDDYTKSSLERGIEKARILQYRH 810
Score = 106 bits (265), Expect = 2e-20
Identities = 64/225 (28%), Positives = 108/225 (48%), Gaps = 20/225 (8%)
Frame = +3
Query: 33 YGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDLFSDMK 212
Y +I C +++A HM +G+ PD+ Y+ +++GYC + +AL L +M
Sbjct: 292 YTVVIRGFCDQNKLEKAECVLLHMEKQGVVPDVYAYSALISGYCKFGKINKALPLHHEMT 351
Query: 213 KRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNK------------------KVKQVA 338
+GI + +V+L GLC+ M A + E K+ +V
Sbjct: 352 SKGIKTNCGVLSVILKGLCRNGMASAAIKQFLEFKDMGFFLDKVCYDVIVDSLCKLGEVE 411
Query: 339 SAF--WCEMKEMELKPDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALL 512
A + EMK+ ++ PDV+ YT +I +C L DA LF EM E G PD +TY L
Sbjct: 412 KAMILFEEMKDRQIVPDVVNYTTMICGYCFQGKLGDALDLFKEMKEMGHKPDIITYNILA 471
Query: 513 SGYCKHGDMDKVDTLVNEMESKGIQPDSRTMSTIDRGIARAKKMQ 647
+ ++G + K L+N M+ G++P+ T + I G+ +++
Sbjct: 472 GAFAQYGAVQKAFDLLNYMKRHGLEPNFVTHNMIIEGLCMGGRVE 516
Score = 103 bits (257), Expect = 2e-19
Identities = 56/196 (28%), Positives = 98/196 (50%)
Frame = +3
Query: 45 ISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDLFSDMKKRGI 224
++ L G + A Y H+ GLS + TY I++ C ++EA+++F +M+K G+
Sbjct: 191 MNQLVECGKVDMALAVYQHLKRLGLSLNEYTYVIVIKALCKKGSMQEAVEVFLEMEKAGV 250
Query: 225 GPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELKPDVICYTAL 404
P+ Y+ ++GLC M ++ + +E ++ YT +
Sbjct: 251 TPNAFAYSTCIEGLCMNGMLDLGYE---------------LLLKWEEADIPLSAFAYTVV 295
Query: 405 IDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLVNEMESKGI 584
I C + L+ A + M + G++PD Y+AL+SGYCK G ++K L +EM SKGI
Sbjct: 296 IRGFCDQNKLEKAECVLLHMEKQGVVPDVYAYSALISGYCKFGKINKALPLHHEMTSKGI 355
Query: 585 QPDSRTMSTIDRGIAR 632
+ + +S I +G+ R
Sbjct: 356 KTNCGVLSVILKGLCR 371
Score = 94.0 bits (232), Expect = 2e-16
Identities = 67/260 (25%), Positives = 112/260 (43%), Gaps = 55/260 (21%)
Frame = +3
Query: 33 YGKLISALCRAGDMKRARWAYDHMVNKGLSPD---------------------------- 128
Y +I ALC+ G M+ A + M G++P+
Sbjct: 222 YVIVIKALCKKGSMQEAVEVFLEMEKAGVTPNAFAYSTCIEGLCMNGMLDLGYELLLKWE 281
Query: 129 -------IITYTIMLNGYCHVNCLREALDLFSDMKKRGIGPDIITYTVLLDGLCKV-SMK 284
YT+++ G+C N L +A + M+K+G+ PD+ Y+ L+ G CK +
Sbjct: 282 EADIPLSAFAYTVVIRGFCDQNKLEKAECVLLHMEKQGVVPDVYAYSALISGYCKFGKIN 341
Query: 285 RARFQNDAEGNKKVKQ----------------VASAF---WCEMKEMELKPDVICYTALI 407
+A + +K +K +ASA + E K+M D +CY ++
Sbjct: 342 KALPLHHEMTSKGIKTNCGVLSVILKGLCRNGMASAAIKQFLEFKDMGFFLDKVCYDVIV 401
Query: 408 DSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLVNEMESKGIQ 587
DS CK ++ A LF+EM + ++PD V YT ++ GYC G + L EM+ G +
Sbjct: 402 DSLCKLGEVEKAMILFEEMKDRQIVPDVVNYTTMICGYCFQGKLGDALDLFKEMKEMGHK 461
Query: 588 PDSRTMSTIDRGIARAKKMQ 647
PD T + + A+ +Q
Sbjct: 462 PDIITYNILAGAFAQYGAVQ 481
Score = 92.0 bits (227), Expect = 6e-16
Identities = 50/187 (26%), Positives = 92/187 (49%)
Frame = +3
Query: 24 KKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDLFS 203
K Y ++ +LC+ G++++A ++ M ++ + PD++ YT M+ GYC L +ALDLF
Sbjct: 394 KVCYDVIVDSLCKLGEVEKAMILFEEMKDRQIVPDVVNYTTMICGYCFQGKLGDALDLFK 453
Query: 204 DMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELKPD 383
+MK+ G PDIITY +L + + F MK L+P+
Sbjct: 454 EMKEMGHKPDIITYNILAGAFAQYGAVQKAFD---------------LLNYMKRHGLEPN 498
Query: 384 VICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLVN 563
+ + +I+ C +++A + D + L Y+A+++GYCK G + L
Sbjct: 499 FVTHNMIIEGLCMGGRVEEAEAFLDGLKGKCL----ENYSAMINGYCKTGHTKEAFQLFM 554
Query: 564 EMESKGI 584
+ ++G+
Sbjct: 555 RLSNQGV 561
Score = 70.5 bits (171), Expect = 2e-09
Identities = 50/210 (23%), Positives = 94/210 (44%)
Frame = +3
Query: 18 PSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDL 197
P Y +I C G + A + M G PDIITY I+ + +++A DL
Sbjct: 427 PDVVNYTTMICGYCFQGKLGDALDLFKEMKEMGHKPDIITYNILAGAFAQYGAVQKAFDL 486
Query: 198 FSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELK 377
+ MK+ G+ P+ +T+ ++++GLC +V++ A AF +K L+
Sbjct: 487 LNYMKRHGLEPNFVTHNMIIEGLCM--------------GGRVEE-AEAFLDGLKGKCLE 531
Query: 378 PDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTL 557
Y+A+I+ +CK+ + ++A LF + G+L + LL+ D + L
Sbjct: 532 N----YSAMINGYCKTGHTKEAFQLFMRLSNQGVLVKKSSCNKLLTNLLILRDNNNALKL 587
Query: 558 VNEMESKGIQPDSRTMSTIDRGIARAKKMQ 647
M + +P + + +A++M+
Sbjct: 588 FKTMITLNAEPSKSMYDKLIGALCQAEEME 617
>ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223546418|gb|EEF47918.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 809
Score = 233 bits (593), Expect = 2e-58
Identities = 110/211 (52%), Positives = 157/211 (74%)
Frame = +3
Query: 18 PSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDL 197
P+ MY K+I AL +AG+M++A++ ++ +V++GL+PD+ITYTIM+NGYC +N ++EA +
Sbjct: 598 PTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHV 657
Query: 198 FSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELK 377
DMK RGI PD+ITYTVLL+ K+ ++ + DA +K+ SA W EMK+M++K
Sbjct: 658 LGDMKNRGIEPDVITYTVLLNNCSKIDLRSSSSSLDAMKSKENMMDPSALWSEMKDMDIK 717
Query: 378 PDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTL 557
PDVICYT LID HCK++N+QDA +LF+EMI+ GL PDTVTYTALLSGYC G++ K L
Sbjct: 718 PDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPDTVTYTALLSGYCNVGNIKKAVVL 777
Query: 558 VNEMESKGIQPDSRTMSTIDRGIARAKKMQF 650
+EM +KGI+PD+ TMS + I + +K+ F
Sbjct: 778 FDEMLNKGIRPDAHTMSVL-HCILKVRKVHF 807
Score = 107 bits (266), Expect = 2e-20
Identities = 63/197 (31%), Positives = 104/197 (52%)
Frame = +3
Query: 42 LISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDLFSDMKKRG 221
L++ L + + A Y + GL+P+ TYTI + G+C L EA+D+F DM++ G
Sbjct: 190 LMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESG 249
Query: 222 IGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELKPDVICYTA 401
+ P+ +YT ++GLC F K ++ V +A ++ DV YT
Sbjct: 250 VTPNSFSYTTFIEGLCLHGRSDLGF-------KVLQDVINA--------KIPMDVFAYTV 294
Query: 402 LIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLVNEMESKG 581
+I C L++A S+ EM + G PD Y AL+SGYC G++ K L +EM SKG
Sbjct: 295 VIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKG 354
Query: 582 IQPDSRTMSTIDRGIAR 632
++ + +S+I +G+++
Sbjct: 355 VKTNCVILSSILQGLSQ 371
Score = 107 bits (266), Expect = 2e-20
Identities = 64/212 (30%), Positives = 107/212 (50%)
Frame = +3
Query: 9 GDGPSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREA 188
G P +Y LIS C G++ +A +D MV+KG+ + + + +L G + E
Sbjct: 319 GFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEV 378
Query: 189 LDLFSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEM 368
+ F + KK GI D Y V++D LCK+ KV++ EMK
Sbjct: 379 ANQFKEFKKMGIFFDEACYNVVMDALCKLG--------------KVEEAVELL-VEMKGK 423
Query: 369 ELKPDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKV 548
++ PD+I YT +I + + DA +++ EM + G PD VTY L G+ ++G +
Sbjct: 424 KMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEA 483
Query: 549 DTLVNEMESKGIQPDSRTMSTIDRGIARAKKM 644
+L+N ME++G++PD+ T + I G+ K+
Sbjct: 484 LSLLNYMETQGVKPDTVTHNMIIEGLCIGGKV 515
Score = 99.0 bits (245), Expect = 5e-18
Identities = 64/230 (27%), Positives = 107/230 (46%), Gaps = 21/230 (9%)
Frame = +3
Query: 6 SGDGPSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLRE 185
SG P+ Y I LC G ++N + D+ YT+++ G+C L+E
Sbjct: 248 SGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKE 307
Query: 186 ALDLFSDMKKRGIGPDIITYTVLLDGLCKV-SMKRARFQNDAEGNKKVK----------- 329
A + +M+K+G PD+ Y L+ G C V ++ +A +D +K VK
Sbjct: 308 AESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQ 367
Query: 330 ---------QVASAFWCEMKEMELKPDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLL 482
+VA+ F E K+M + D CY ++D+ CK +++A L EM ++
Sbjct: 368 GLSQMGMASEVANQF-KEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMV 426
Query: 483 PDTVTYTALLSGYCKHGDMDKVDTLVNEMESKGIQPDSRTMSTIDRGIAR 632
PD + YT ++SGY G + + EM+ G +PD T + + G +R
Sbjct: 427 PDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSR 476
Score = 93.6 bits (231), Expect = 2e-16
Identities = 59/182 (32%), Positives = 85/182 (46%), Gaps = 15/182 (8%)
Frame = +3
Query: 9 GDGPSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNC---- 176
G P Y +I+ CR MK A M N+G+ PD+ITYT++LN ++
Sbjct: 630 GLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNCSKIDLRSSS 689
Query: 177 -----------LREALDLFSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKK 323
+ + L+S+MK I PD+I YTVL+D CK +
Sbjct: 690 SSLDAMKSKENMMDPSALWSEMKDMDIKPDVICYTVLIDKHCKTNN-------------- 735
Query: 324 VKQVASAFWCEMKEMELKPDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYT 503
Q A + EM + L PD + YTAL+ +C N++ A LFDEM+ G+ PD T +
Sbjct: 736 -IQDAINLFNEMIDRGLAPDTVTYTALLSGYCNVGNIKKAVVLFDEMLNKGIRPDAHTMS 794
Query: 504 AL 509
L
Sbjct: 795 VL 796
Score = 90.9 bits (224), Expect = 1e-15
Identities = 61/245 (24%), Positives = 112/245 (45%), Gaps = 51/245 (20%)
Frame = +3
Query: 33 YGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDLFSDMK 212
Y +IS G + A Y M + G PDI+TY ++ G+ +EAL L + M+
Sbjct: 432 YTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYME 491
Query: 213 KRGIGPDIITYTVLLDGLC---KVSMKRARFQNDAE-----------GNKKVKQVASAF- 347
+G+ PD +T+ ++++GLC KV +A F N E G + V AF
Sbjct: 492 TQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNLEEKCLENYSAMVNGYCEANHVNKAFA 551
Query: 348 ---------------------------------WCEMKEM---ELKPDVICYTALIDSHC 419
C ++ M + P +I Y+ +I +
Sbjct: 552 LLIRLSKQGRILKKASFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALF 611
Query: 420 KSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLVNEMESKGIQPDSR 599
++ ++ A +F+ +++ GL PD +TYT +++GYC+ M + ++ +M+++GI+PD
Sbjct: 612 QAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVI 671
Query: 600 TMSTI 614
T + +
Sbjct: 672 TYTVL 676
Score = 60.8 bits (146), Expect = 2e-06
Identities = 39/155 (25%), Positives = 71/155 (45%)
Frame = +3
Query: 183 EALDLFSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMK 362
+A D+ K G P I++ L++ L + ++KV +A A + ++K
Sbjct: 167 QAFDVLLQTKHCGFAPQILSCNFLMNRLVE--------------SRKV-DMAIAIYRQLK 211
Query: 363 EMELKPDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMD 542
L P+ YT I C+ NL +A +F +M E G+ P++ +YT + G C HG D
Sbjct: 212 AFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSD 271
Query: 543 KVDTLVNEMESKGIQPDSRTMSTIDRGIARAKKMQ 647
++ ++ + I D + + RG K++
Sbjct: 272 LGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLK 306
>ref|XP_002525881.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223534795|gb|EEF36485.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 913
Score = 232 bits (592), Expect = 3e-58
Identities = 117/240 (48%), Positives = 164/240 (68%), Gaps = 4/240 (1%)
Frame = +3
Query: 18 PSKKMYGKLISALCRAGD---MKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREA 188
PSK +YGKL ++LCRAG M++A+ +D ++ +G +PD+I YTIM+ YC +NCL+EA
Sbjct: 611 PSKFIYGKLFTSLCRAGGAAGMRKAQSVFDMLLKRGWTPDLIAYTIMITSYCRMNCLKEA 670
Query: 189 LDLFSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEM 368
+DLF DMK+RGI PD++T+TVLLDG K +K+ +A+G + A A W EMK+
Sbjct: 671 VDLFHDMKQRGIKPDLVTFTVLLDGHHKAHIKKVYSAANAKGGNEDIFDALAIWTEMKDT 730
Query: 369 ELKPDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKV 548
E+KPDVI YT LID +CK D+L DA +FDEMIE GL PD +TYTALLSG C+ GD+D+
Sbjct: 731 EIKPDVIFYTVLIDGYCKVDSLHDAIGVFDEMIERGLEPDIITYTALLSGCCQRGDVDRA 790
Query: 549 DTLVNEMESKGIQPDSRTMSTIDRGIARAKKMQFRH*NPCNSHHC-RYSTGKNDSPCRIY 725
L+++M KGI PD+RTMS + GI + ++ C++ C +Y G + S C I+
Sbjct: 791 VNLLDQMSLKGISPDTRTMSALLHGILKTRQ--------CSAPQCLKYFDGYSLSICHIF 842
Score = 102 bits (253), Expect = 6e-19
Identities = 59/210 (28%), Positives = 111/210 (52%)
Frame = +3
Query: 18 PSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDL 197
P Y LI C+AG++ +A + M++KG+ + + +L+ C + E +D
Sbjct: 336 PDMHCYTALICRFCKAGNLLKAYAFLNEMMSKGVKVNCVIVGSILHCLCELGMHSEVVDQ 395
Query: 198 FSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELK 377
F+ K G+ D ++Y ++D LCK+ K+++ A EMK ++
Sbjct: 396 FNQFKSLGLFLDGVSYNNVVDALCKLG--------------KLEE-AITLLDEMKMKQIN 440
Query: 378 PDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTL 557
DV+ YT LI+ +C N+ DA +F+EM E+G+ D VTY L+SG+C++G + L
Sbjct: 441 MDVMHYTTLINGYCCQGNVVDAFKVFEEMRENGIEIDVVTYDVLVSGFCRNGLATEALNL 500
Query: 558 VNEMESKGIQPDSRTMSTIDRGIARAKKMQ 647
++ M+++ ++P+S T + + + K++
Sbjct: 501 LDYMQTQKLKPNSITYNVVVESLCMGGKVK 530
Score = 87.0 bits (214), Expect = 2e-14
Identities = 53/182 (29%), Positives = 86/182 (47%)
Frame = +3
Query: 42 LISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDLFSDMKKRG 221
L+++L + + A Y + GLSP+ TY I++ C L EA+ + +M++ G
Sbjct: 204 LMNSLIKNSKLDMALAVYKQLKRLGLSPNDYTYAIVIKALCINGSLEEAMYVIKEMEESG 263
Query: 222 IGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELKPDVICYTA 401
I P YT ++GLC M +Q V A+ K + D+ YT
Sbjct: 264 ITPTGFAYTAYIEGLCVNEMSDLGYQ-----------VLQAW----KGANIPLDMYAYTV 308
Query: 402 LIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLVNEMESKG 581
+ C A S+ +M + G++PD YTAL+ +CK G++ K +NEM SKG
Sbjct: 309 AVRGFCNELKFDKAESVLRDMEKEGMVPDMHCYTALICRFCKAGNLLKAYAFLNEMMSKG 368
Query: 582 IQ 587
++
Sbjct: 369 VK 370
Score = 80.9 bits (198), Expect = 1e-12
Identities = 48/185 (25%), Positives = 88/185 (47%), Gaps = 2/185 (1%)
Frame = +3
Query: 36 GKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDLFSDMKK 215
G ++ LC G ++ + GL D ++Y +++ C + L EA+ L +MK
Sbjct: 377 GSILHCLCELGMHSEVVDQFNQFKSLGLFLDGVSYNNVVDALCKLGKLEEAITLLDEMKM 436
Query: 216 RGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAF--WCEMKEMELKPDVI 389
+ I D++ YT L++G C +GN V AF + EM+E ++ DV+
Sbjct: 437 KQINMDVMHYTTLINGYC------------CQGN-----VVDAFKVFEEMRENGIEIDVV 479
Query: 390 CYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLVNEM 569
Y L+ C++ +A +L D M L P+++TY ++ C G + + + + N +
Sbjct: 480 TYDVLVSGFCRNGLATEALNLLDYMQTQKLKPNSITYNVVVESLCMGGKVKEAEAVFNSI 539
Query: 570 ESKGI 584
E K +
Sbjct: 540 EDKSL 544
Score = 77.4 bits (189), Expect = 2e-11
Identities = 53/223 (23%), Positives = 103/223 (46%), Gaps = 22/223 (9%)
Frame = +3
Query: 33 YGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDLFSDMK 212
Y L+S CR G A D+M + L P+ ITY +++ C ++EA +F+ ++
Sbjct: 481 YDVLVSGFCRNGLATEALNLLDYMQTQKLKPNSITYNVVVESLCMGGKVKEAEAVFNSIE 540
Query: 213 KRGIGPDIITYTVLLDGLCKVS----MKRARFQNDAEGNKKVKQVASAF--WCE------ 356
+ + Y +++G CK + + F+ +G+ K + CE
Sbjct: 541 DKSLD----NYFAMINGYCKANHTAGAAKLFFRLSVKGHVKRSCCYNLLKNLCEEGDNDG 596
Query: 357 -------MKEMELKPDVICYTALIDSHCKSD---NLQDASSLFDEMIEHGLLPDTVTYTA 506
M + ++P Y L S C++ ++ A S+FD +++ G PD + YT
Sbjct: 597 ILMLLETMLNLNVEPSKFIYGKLFTSLCRAGGAAGMRKAQSVFDMLLKRGWTPDLIAYTI 656
Query: 507 LLSGYCKHGDMDKVDTLVNEMESKGIQPDSRTMSTIDRGIARA 635
+++ YC+ + + L ++M+ +GI+PD T + + G +A
Sbjct: 657 MITSYCRMNCLKEAVDLFHDMKQRGIKPDLVTFTVLLDGHHKA 699
>gb|ESW11537.1| hypothetical protein PHAVU_008G038900g [Phaseolus vulgaris]
Length = 803
Score = 221 bits (564), Expect = 5e-55
Identities = 107/213 (50%), Positives = 151/213 (70%)
Frame = +3
Query: 18 PSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDL 197
PS KM+ K++SALC+AGDM+ A ++ V +G +PD+I YTIM+NGYC +NCL+ A DL
Sbjct: 594 PSIKMFSKVLSALCQAGDMESALSLFNSFVLRGFTPDVIMYTIMINGYCRMNCLQVAYDL 653
Query: 198 FSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELK 377
DMK+RGI PD+ITYTVLLDG K +++R G K S+ +M++ME+
Sbjct: 654 LQDMKRRGIKPDVITYTVLLDGNLKANLRRCV---SPRGKGKRTSSVSSTLRDMEQMEIN 710
Query: 378 PDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTL 557
PDV+CYT LID H K+++ Q+A SLFD+MI+ GL P+TVTYTAL+SG C G ++K L
Sbjct: 711 PDVVCYTVLIDGHMKTNDFQEAISLFDKMIDSGLEPNTVTYTALVSGLCNKGHVEKAVIL 770
Query: 558 VNEMESKGIQPDSRTMSTIDRGIARAKKMQFRH 656
+NEM SKG+ PD +S + RGI +A++++F +
Sbjct: 771 LNEMSSKGMTPDVHIISALKRGIIKARRVKFHN 803
Score = 98.6 bits (244), Expect = 7e-18
Identities = 57/200 (28%), Positives = 98/200 (49%)
Frame = +3
Query: 33 YGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDLFSDMK 212
Y ++ C + AR +D M +G+ PD+ Y+ +++GYC + L +ALDL +M
Sbjct: 288 YVAVVRGFCNEMKLDEARGVFDDMERQGVVPDVFVYSALIHGYCKGHNLLKALDLHDEMI 347
Query: 213 KRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELKPDVIC 392
RG+ + + + +L L K+ M +V F E+KE + D +
Sbjct: 348 SRGLKSNCVIVSYILRCLGKIGMP--------------LEVVDQF-KELKESGMFLDGVV 392
Query: 393 YTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLVNEME 572
Y + D+ CK ++DA + ++M G+ D YT L++GYC GD+ + EM
Sbjct: 393 YNIVFDALCKLGKVEDAIVMSEDMKSKGVALDVKHYTTLINGYCLQGDLVNGFRVFKEMS 452
Query: 573 SKGIQPDSRTMSTIDRGIAR 632
KG +PD T + + G++R
Sbjct: 453 DKGFKPDIVTYNVLATGLSR 472
Score = 94.0 bits (232), Expect = 2e-16
Identities = 61/262 (23%), Positives = 111/262 (42%), Gaps = 51/262 (19%)
Frame = +3
Query: 3 SSGDGPSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLR 182
S G K Y LI+ C GD+ + M +KG PDI+TY ++ G
Sbjct: 418 SKGVALDVKHYTTLINGYCLQGDLVNGFRVFKEMSDKGFKPDIVTYNVLATGLSRNGHAC 477
Query: 183 EALDLFSDMKKRGIGPDIITYTVLLDGLC---KVSMKRARFQNDAEGNKKVKQVASAFWC 353
EAL L M+ +G+ P+ T+ ++++GLC KV RA F + + + ++ +C
Sbjct: 478 EALKLLDYMESQGVKPNTTTHKLIIEGLCSAGKVLEARAHFNSLEDKSVEIYSAMVNGYC 537
Query: 354 E------------------------------------------------MKEMELKPDVI 389
E M +KP +
Sbjct: 538 EANLVKKSYEIFLKLSNQGNLANDASCFKLLTKLCLTGDTEKAVMLLERMLLSNVKPSIK 597
Query: 390 CYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLVNEM 569
++ ++ + C++ +++ A SLF+ + G PD + YT +++GYC+ + L+ +M
Sbjct: 598 MFSKVLSALCQAGDMESALSLFNSFVLRGFTPDVIMYTIMINGYCRMNCLQVAYDLLQDM 657
Query: 570 ESKGIQPDSRTMSTIDRGIARA 635
+ +GI+PD T + + G +A
Sbjct: 658 KRRGIKPDVITYTVLLDGNLKA 679
Score = 87.4 bits (215), Expect = 2e-14
Identities = 53/197 (26%), Positives = 95/197 (48%)
Frame = +3
Query: 42 LISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDLFSDMKKRG 221
L + L G++ +A Y+ + G P+ TYTI++ C L + + +F +M++ G
Sbjct: 186 LFNRLVEHGEVDKALAIYEQLKRFGFRPNCYTYTIVIKALCKKGDLMQPVCVFEEMERVG 245
Query: 222 IGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELKPDVICYTA 401
I P+ Y ++GLC ++ V AF ++ +V Y A
Sbjct: 246 ITPNSYCYAAYIEGLCNNHRSDLGYE-----------VLQAF----RKGNAPLEVYAYVA 290
Query: 402 LIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLVNEMESKG 581
++ C L +A +FD+M G++PD Y+AL+ GYCK ++ K L +EM S+G
Sbjct: 291 VVRGFCNEMKLDEARGVFDDMERQGVVPDVFVYSALIHGYCKGHNLLKALDLHDEMISRG 350
Query: 582 IQPDSRTMSTIDRGIAR 632
++ + +S I R + +
Sbjct: 351 LKSNCVIVSYILRCLGK 367
>ref|XP_003602250.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491298|gb|AES72501.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 946
Score = 202 bits (515), Expect = 3e-49
Identities = 99/211 (46%), Positives = 137/211 (64%)
Frame = +3
Query: 21 SKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDLF 200
SK +Y K+++ LC+ G+M+RAR +D + +G +PD++TYTIM+ YC +NCL+EA DLF
Sbjct: 584 SKVLYSKVLAELCQKGNMQRARSLFDFFLGRGFTPDVVTYTIMIKSYCTMNCLQEAHDLF 643
Query: 201 SDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELKP 380
DMK RGI PD+ITYTVLLDG K + + F + K S W +MK+ E+ P
Sbjct: 644 QDMKSRGIKPDVITYTVLLDGKSKQARSKEHFSSQHGKGKDAPYDVSTIWRDMKDREVSP 703
Query: 381 DVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLV 560
DV+ YT LID H K DN +DA LF+E+++ GL PD VTYTAL SG G+ + TL
Sbjct: 704 DVVIYTVLIDGHIKVDNFEDAIRLFNEVMKRGLEPDNVTYTALFSGLLNSGNSEIAVTLY 763
Query: 561 NEMESKGIQPDSRTMSTIDRGIARAKKMQFR 653
NEM SKG+ P I++ I + +K+QF+
Sbjct: 764 NEMSSKGMTPPLH----INQRILKVRKLQFQ 790
Score = 92.4 bits (228), Expect = 5e-16
Identities = 55/210 (26%), Positives = 98/210 (46%)
Frame = +3
Query: 18 PSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDL 197
P +Y LI C+ D+ +A Y+ M+ KG+ + + + +L+ + + +D
Sbjct: 333 PDCHVYSSLICGYCKTHDLVKALDLYEDMILKGIKTNCVIVSCILHCFAEMGEDSRVVDT 392
Query: 198 FSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELK 377
F ++K+ G+ D + Y ++ D L K+ K+ +VA ++K M +
Sbjct: 393 FKEVKQSGVFLDGVAYNIVFDSLFKLG--------------KMDEVAGMLE-DLKSMHID 437
Query: 378 PDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTL 557
D+ YT I +C A +F EM E G PD V Y L +G C + + + L
Sbjct: 438 FDIKHYTTFIKGYCLQGKPDKAYIIFKEMEEKGFKPDVVAYNVLAAGLCGNRHVSEAMDL 497
Query: 558 VNEMESKGIQPDSRTMSTIDRGIARAKKMQ 647
+N M+S+G++P+S T I G K++
Sbjct: 498 LNYMDSQGVKPNSTTHKIIIEGFCSEGKIE 527
Score = 87.4 bits (215), Expect = 2e-14
Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 2/226 (0%)
Frame = +3
Query: 9 GDGPSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREA 188
G P Y L + LC + A ++M ++G+ P+ T+ I++ G+C + EA
Sbjct: 470 GFKPDVVAYNVLAAGLCGNRHVSEAMDLLNYMDSQGVKPNSTTHKIIIEGFCSEGKIEEA 529
Query: 189 LDLFSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQ--NDAEGNKKVKQVASAFWCEMK 362
F+ MK + YT ++ G C+ + ++ ++ Q +S +K
Sbjct: 530 EGYFNSMKDESVE----IYTAMVSGYCEADLIEKSYELFHELSNRGDTAQESSC----LK 581
Query: 363 EMELKPDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMD 542
++ + Y+ ++ C+ N+Q A SLFD + G PD VTYT ++ YC +
Sbjct: 582 QL----SKVLYSKVLAELCQKGNMQRARSLFDFFLGRGFTPDVVTYTIMIKSYCTMNCLQ 637
Query: 543 KVDTLVNEMESKGIQPDSRTMSTIDRGIARAKKMQFRH*NPCNSHH 680
+ L +M+S+GI+PD T + + G K Q R +S H
Sbjct: 638 EAHDLFQDMKSRGIKPDVITYTVLLDG----KSKQARSKEHFSSQH 679
Score = 75.9 bits (185), Expect = 5e-11
Identities = 53/192 (27%), Positives = 86/192 (44%), Gaps = 1/192 (0%)
Frame = +3
Query: 42 LISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGY-CHVNCLREALDLFSDMKKR 218
LI+ L + + A +D + + GL P+ TY I++ L++A +F +MK+
Sbjct: 200 LINRLVKCDQVNMAFEIFDRIKSLGLCPNHHTYAIIIKALGTKGGDLKQASGVFDEMKEA 259
Query: 219 GIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELKPDVICYT 398
G+ P+ Y ++GLC N + ++E DV YT
Sbjct: 260 GVTPNSYCYAAYIEGLC---------------NNHQSDLGYDLLRALRENNAPIDVYAYT 304
Query: 399 ALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLVNEMESK 578
A+I C L A +F +M L+PD Y++L+ GYCK D+ K L +M K
Sbjct: 305 AVIRGFCNEMKLDKAMQVFYDMEWQRLVPDCHVYSSLICGYCKTHDLVKALDLYEDMILK 364
Query: 579 GIQPDSRTMSTI 614
GI+ + +S I
Sbjct: 365 GIKTNCVIVSCI 376
Score = 75.5 bits (184), Expect = 6e-11
Identities = 51/215 (23%), Positives = 97/215 (45%), Gaps = 1/215 (0%)
Frame = +3
Query: 3 SSGDGPSKKMYGKLISAL-CRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCL 179
S G P+ Y +I AL + GD+K+A +D M G++P+ Y + G C+ +
Sbjct: 222 SLGLCPNHHTYAIIIKALGTKGGDLKQASGVFDEMKEAGVTPNSYCYAAYIEGLCNNHQS 281
Query: 180 REALDLFSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEM 359
DL +++ D+ YT ++ G C K+ + F+ +M
Sbjct: 282 DLGYDLLRALRENNAPIDVYAYTAVIRGFCN--------------EMKLDKAMQVFY-DM 326
Query: 360 KEMELKPDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDM 539
+ L PD Y++LI +CK+ +L A L+++MI G+ + V + +L + + G+
Sbjct: 327 EWQRLVPDCHVYSSLICGYCKTHDLVKALDLYEDMILKGIKTNCVIVSCILHCFAEMGED 386
Query: 540 DKVDTLVNEMESKGIQPDSRTMSTIDRGIARAKKM 644
+V E++ G+ D + + + + KM
Sbjct: 387 SRVVDTFKEVKQSGVFLDGVAYNIVFDSLFKLGKM 421
Score = 63.2 bits (152), Expect = 3e-07
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 2/175 (1%)
Frame = +3
Query: 114 GLSPDIITYTIMLNGYCHVNCLREALDLFSDMKKRGIGPDIITYTVLLDGLCKVSMKRAR 293
G+ P+I ++N + + A ++F +K G+ P+ TY +++ L
Sbjct: 189 GILPNIFACNFLINRLVKCDQVNMAFEIFDRIKSLGLCPNHHTYAIIIKAL--------- 239
Query: 294 FQNDAEGNK--KVKQVASAFWCEMKEMELKPDVICYTALIDSHCKSDNLQDASSLFDEMI 467
G K +KQ AS + EMKE + P+ CY A I+ C + L +
Sbjct: 240 ------GTKGGDLKQ-ASGVFDEMKEAGVTPNSYCYAAYIEGLCNNHQSDLGYDLLRALR 292
Query: 468 EHGLLPDTVTYTALLSGYCKHGDMDKVDTLVNEMESKGIQPDSRTMSTIDRGIAR 632
E+ D YTA++ G+C +DK + +ME + + PD S++ G +
Sbjct: 293 ENNAPIDVYAYTAVIRGFCNEMKLDKAMQVFYDMEWQRLVPDCHVYSSLICGYCK 347
>ref|XP_006855624.1| hypothetical protein AMTR_s00044p00087550 [Amborella trichopoda]
gi|548859411|gb|ERN17091.1| hypothetical protein
AMTR_s00044p00087550 [Amborella trichopoda]
Length = 872
Score = 202 bits (513), Expect = 4e-49
Identities = 100/214 (46%), Positives = 142/214 (66%), Gaps = 3/214 (1%)
Frame = +3
Query: 18 PSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDL 197
P + Y LISA + G+M +AR Y++++ +GLSPD+ITYT ++NGYC VN L+EA L
Sbjct: 661 PDEITYSTLISAFAQLGNMTKARDLYENLMVRGLSPDVITYTALINGYCRVNHLQEACKL 720
Query: 198 FSDMKKRGIGPDIITYTVLLDGLCK-VSMKRARFQNDAEGNKKVKQVASAFWC--EMKEM 368
F+DMK++G PD+IT+T L DG K + + R++ G ++V+ F EMKEM
Sbjct: 721 FNDMKQKGPRPDVITFTALFDGYFKEILQEDLRYR----GKRRVQVATEIFKLLEEMKEM 776
Query: 369 ELKPDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKV 548
LKPD+ICYT LID HCK + L DA LF EM+ G+ PD V YT L+SGYC G++ K
Sbjct: 777 GLKPDLICYTVLIDGHCKINRLHDAFQLFQEMLGRGITPDIVAYTTLISGYCNRGNVKKA 836
Query: 549 DTLVNEMESKGIQPDSRTMSTIDRGIARAKKMQF 650
LV EM +G++PD T S ++ G+ +A+K++F
Sbjct: 837 ANLVEEMLFRGLKPDKLTYSVLEHGVLKARKLEF 870
Score = 108 bits (269), Expect = 9e-21
Identities = 63/213 (29%), Positives = 108/213 (50%)
Frame = +3
Query: 9 GDGPSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREA 188
G P Y LI+ C G++ +A ++ M++KG+ I ++ EA
Sbjct: 378 GIAPDMYSYKSLITGYCNVGNLVKALSLHEDMISKGVKTTCIILGYLIQSLRKNGLAIEA 437
Query: 189 LDLFSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEM 368
++LF + G+ D + Y +++D CK +GN +VA EMK
Sbjct: 438 IELFERFRNSGLFLDEVLYGMVIDAYCK------------QGNT---EVALQLMDEMKGR 482
Query: 369 ELKPDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKV 548
L PD + YT+LID +C++ +L A +F +M+E GL P+TVTY L +G+C+ G + +
Sbjct: 483 RLAPDSLHYTSLIDGYCRNGDLGHAYKVFKDMVETGLEPNTVTYNILANGFCRKGLVQET 542
Query: 549 DTLVNEMESKGIQPDSRTMSTIDRGIARAKKMQ 647
L+ M +G+ P+ T ST+ G+ + K++
Sbjct: 543 FDLLECMLDQGLVPNRVTYSTVIYGLCKGGKLK 575
Score = 108 bits (269), Expect = 9e-21
Identities = 64/230 (27%), Positives = 108/230 (46%), Gaps = 20/230 (8%)
Frame = +3
Query: 18 PSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDL 197
P Y LI CR GD+ A + MV GL P+ +TY I+ NG+C ++E DL
Sbjct: 486 PDSLHYTSLIDGYCRNGDLGHAYKVFKDMVETGLEPNTVTYNILANGFCRKGLVQETFDL 545
Query: 198 FSDMKKRGIGPDIITYTVLLDGLCKVS-MKRARFQNDAEGNKKVKQVASAF------WCE 356
M +G+ P+ +TY+ ++ GLCK +K A +K + + F +CE
Sbjct: 546 LECMLDQGLVPNRVTYSTVIYGLCKGGKLKDAESFFKTLVDKGLGHCSVTFSAMISGYCE 605
Query: 357 MKEME-------------LKPDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVT 497
+ + + P + LI + CK ++L A + + M+ G++PD +T
Sbjct: 606 QRHTKEAYELFKRLVKKRVLPSSTACSRLISNLCKDEDLDKALMVHEMMVADGVIPDEIT 665
Query: 498 YTALLSGYCKHGDMDKVDTLVNEMESKGIQPDSRTMSTIDRGIARAKKMQ 647
Y+ L+S + + G+M K L + +G+ PD T + + G R +Q
Sbjct: 666 YSTLISAFAQLGNMTKARDLYENLMVRGLSPDVITYTALINGYCRVNHLQ 715
Score = 105 bits (263), Expect = 4e-20
Identities = 60/202 (29%), Positives = 103/202 (50%)
Frame = +3
Query: 18 PSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDL 197
P++ Y +I LC+ G +K A + +V+KGL +T++ M++GYC +EA +L
Sbjct: 556 PNRVTYSTVIYGLCKGGKLKDAESFFKTLVDKGLGHCSVTFSAMISGYCEQRHTKEAYEL 615
Query: 198 FSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELK 377
F + K+ + P + L+ LCK D + V ++ M +
Sbjct: 616 FKRLVKKRVLPSSTACSRLISNLCK--------DEDLDKALMVHEM-------MVADGVI 660
Query: 378 PDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTL 557
PD I Y+ LI + + N+ A L++ ++ GL PD +TYTAL++GYC+ + + L
Sbjct: 661 PDEITYSTLISAFAQLGNMTKARDLYENLMVRGLSPDVITYTALINGYCRVNHLQEACKL 720
Query: 558 VNEMESKGIQPDSRTMSTIDRG 623
N+M+ KG +PD T + + G
Sbjct: 721 FNDMKQKGPRPDVITFTALFDG 742
Score = 102 bits (254), Expect = 5e-19
Identities = 60/187 (32%), Positives = 89/187 (47%), Gaps = 14/187 (7%)
Frame = +3
Query: 9 GDGPSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYC-------- 164
G P Y LI+ CR ++ A ++ M KG PD+IT+T + +GY
Sbjct: 693 GLSPDVITYTALINGYCRVNHLQEACKLFNDMKQKGPRPDVITFTALFDGYFKEILQEDL 752
Query: 165 ------HVNCLREALDLFSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKV 326
V E L +MK+ G+ PD+I YTVL+DG CK++ FQ
Sbjct: 753 RYRGKRRVQVATEIFKLLEEMKEMGLKPDLICYTVLIDGHCKINRLHDAFQ--------- 803
Query: 327 KQVASAFWCEMKEMELKPDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTA 506
+ EM + PD++ YT LI +C N++ A++L +EM+ GL PD +TY+
Sbjct: 804 ------LFQEMLGRGITPDIVAYTTLISGYCNRGNVKKAANLVEEMLFRGLKPDKLTYSV 857
Query: 507 LLSGYCK 527
L G K
Sbjct: 858 LEHGVLK 864
Score = 87.8 bits (216), Expect = 1e-14
Identities = 50/165 (30%), Positives = 88/165 (53%), Gaps = 2/165 (1%)
Frame = +3
Query: 99 HMVNK-GLSPDIITYTIMLNGYCHVNCLREALDLFSDMKKRGIGPDIITYTVLLDGLCKV 275
H + K G +P++ T+TI++ C L++ALD+ ++M++ GI PD T+T L+DG+C
Sbjct: 267 HQLKKLGFNPNVYTFTIIVKSLCKGGKLQDALDMLTEMEEMGIAPDAFTFTTLIDGIC-- 324
Query: 276 SMKRARFQNDAE-GNKKVKQVASAFWCEMKEMELKPDVICYTALIDSHCKSDNLQDASSL 452
F +++ G K +K + S + Y +I C L +A +
Sbjct: 325 ------FNGESKMGYKLLKTIRS--------RGVLLYTFSYNIVIRGFCGEMKLDEAELV 370
Query: 453 FDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLVNEMESKGIQ 587
+M E G+ PD +Y +L++GYC G++ K +L +M SKG++
Sbjct: 371 LSDMEEQGIAPDMYSYKSLITGYCNVGNLVKALSLHEDMISKGVK 415
Score = 75.9 bits (185), Expect = 5e-11
Identities = 53/201 (26%), Positives = 88/201 (43%)
Frame = +3
Query: 21 SKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDLF 200
S K++ LI A G A N G P + + ++N A LF
Sbjct: 207 SFKVFDGLIKAYADRGMFDEAVGLVLQAGNNGCLPHVWSCNFLINYLIDNKKQDTAEALF 266
Query: 201 SDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELKP 380
+KK G P++ T+T+++ LCK G K Q A EM+EM + P
Sbjct: 267 HQLKKLGFNPNVYTFTIIVKSLCK-------------GGKL--QDALDMLTEMEEMGIAP 311
Query: 381 DVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLV 560
D +T LID C + + L + G+L T +Y ++ G+C +D+ + ++
Sbjct: 312 DAFTFTTLIDGICFNGESKMGYKLLKTIRSRGVLLYTFSYNIVIRGFCGEMKLDEAELVL 371
Query: 561 NEMESKGIQPDSRTMSTIDRG 623
++ME +GI PD + ++ G
Sbjct: 372 SDMEEQGIAPDMYSYKSLITG 392
Score = 65.1 bits (157), Expect = 8e-08
Identities = 54/225 (24%), Positives = 96/225 (42%), Gaps = 41/225 (18%)
Frame = +3
Query: 93 YDHMVNKGLSPDIITYTIMLNGYCHVNC---LREALD-------------LFSDMKKRGI 224
++ + G S ++ TY+ ++ C LR+ L+ LF + K
Sbjct: 142 FNQVKGLGFSHNVHTYSTIIQILCSSGLHHKLRKLLEELVFETQNFEIWRLFYSLPKDCN 201
Query: 225 GPDIITYTVLLDGLCKVSMKRARFQNDAEG-------------------------NKKVK 329
G + I++ V DGL K R F ++A G + K +
Sbjct: 202 GREAISFKVF-DGLIKAYADRGMF-DEAVGLVLQAGNNGCLPHVWSCNFLINYLIDNKKQ 259
Query: 330 QVASAFWCEMKEMELKPDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTAL 509
A A + ++K++ P+V +T ++ S CK LQDA + EM E G+ PD T+T L
Sbjct: 260 DTAEALFHQLKKLGFNPNVYTFTIIVKSLCKGGKLQDALDMLTEMEEMGIAPDAFTFTTL 319
Query: 510 LSGYCKHGDMDKVDTLVNEMESKGIQPDSRTMSTIDRGIARAKKM 644
+ G C +G+ L+ + S+G+ + + + + RG K+
Sbjct: 320 IDGICFNGESKMGYKLLKTIRSRGVLLYTFSYNIVIRGFCGEMKL 364
>ref|XP_003577009.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g13800-like [Brachypodium distachyon]
Length = 821
Score = 196 bits (498), Expect = 2e-47
Identities = 99/214 (46%), Positives = 136/214 (63%), Gaps = 2/214 (0%)
Frame = +3
Query: 12 DGPSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREAL 191
D P Y KLISA C+ GDM+ AR + MV +GL D+I YT+++NGYC + ++EA
Sbjct: 606 DVPDLISYSKLISAYCQTGDMRNARLWFHDMVQRGLPVDVIVYTVLMNGYCKIGLMQEAC 665
Query: 192 DLFSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKV--KQVASAFWCEMKE 365
+LF+ M GI PDII YTVLLDG K ++R R+Q + + + + + MKE
Sbjct: 666 ELFAQMTSLGIKPDIIAYTVLLDGHLKEDLQR-RWQGISRDKRSLLLRAKQNRLLSSMKE 724
Query: 366 MELKPDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDK 545
ME++PDV CYT LID CKSD L+ A LFDEM++ GL PD YTAL++GYC G++ K
Sbjct: 725 MEIEPDVPCYTVLIDGQCKSDYLEQARGLFDEMLQKGLTPDHYAYTALINGYCSQGEVAK 784
Query: 546 VDTLVNEMESKGIQPDSRTMSTIDRGIARAKKMQ 647
+ L EM KGI+PD T S ++R + R ++ Q
Sbjct: 785 AEDLFQEMVDKGIKPDVLTFSVLNRRVLRNRQDQ 818
Score = 101 bits (251), Expect = 1e-18
Identities = 64/234 (27%), Positives = 110/234 (47%), Gaps = 21/234 (8%)
Frame = +3
Query: 9 GDGPSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREA 188
G P + Y LI C GD++ AR A++ M+ + PD++TY I+ +G + E
Sbjct: 430 GLSPDRIHYTCLIKGYCLKGDIQNARQAFEEMLKANVKPDVVTYNILASGLSKRGLVMEV 489
Query: 189 LDLFSDMKKRGIGPDIITYTVLLDGLCK---VSMKRARFQ-NDAEGNKKVKQVASAFWC- 353
DL M+ RG+ P+ +TY V++DG C+ +S F + +G ++ + S+ C
Sbjct: 490 FDLIGHMEDRGLQPNSLTYGVVIDGFCRGDNLSEAEVLFNIVEEKGIDNIEVLYSSMVCG 549
Query: 354 ----------------EMKEMELKPDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLP 485
K+ +L C + LI C+ N Q AS++ M+E +P
Sbjct: 550 YLHKGWTDNAYVLFLRVAKQGKLVDRFSC-SKLISDLCRDGNSQGASTVCSTMLEKNDVP 608
Query: 486 DTVTYTALLSGYCKHGDMDKVDTLVNEMESKGIQPDSRTMSTIDRGIARAKKMQ 647
D ++Y+ L+S YC+ GDM ++M +G+ D + + G + MQ
Sbjct: 609 DLISYSKLISAYCQTGDMRNARLWFHDMVQRGLPVDVIVYTVLMNGYCKIGLMQ 662
Score = 97.4 bits (241), Expect = 2e-17
Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Frame = +3
Query: 33 YGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDLFSDMK 212
+ ++ LC+ ++ ++ V +GL+PDI Y+ ++ YC V L + LD + M
Sbjct: 298 FNVVMDGLCKEMRLEEVEKLLENKVRQGLTPDIYGYSYLIRSYCKVGNLLKVLDHYQAMV 357
Query: 213 KRGIGPDIITYTVLLDGLCKVSMKRA---RFQNDAEGNKKVK----QVASAFWCEMKEME 371
G+ + + LL K+ M FQ + + +A +C++ M+
Sbjct: 358 SHGLEANCHIMSYLLQCFTKLGMASQVTEYFQKFRDSGLHIDGVLYNIAMDAYCKLGNMD 417
Query: 372 -------------LKPDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALL 512
L PD I YT LI +C ++Q+A F+EM++ + PD VTY L
Sbjct: 418 EAVKLLGEMMTVGLSPDRIHYTCLIKGYCLKGDIQNARQAFEEMLKANVKPDVVTYNILA 477
Query: 513 SGYCKHGDMDKVDTLVNEMESKGIQPDSRTMSTIDRGIARAKKM 644
SG K G + +V L+ ME +G+QP+S T + G R +
Sbjct: 478 SGLSKRGLVMEVFDLIGHMEDRGLQPNSLTYGVVIDGFCRGDNL 521
Score = 95.1 bits (235), Expect = 8e-17
Identities = 66/228 (28%), Positives = 102/228 (44%)
Frame = +3
Query: 30 MYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDLFSDM 209
+Y + A C+ G+M A M+ GLSPD I YT ++ GYC ++ A F +M
Sbjct: 402 LYNIAMDAYCKLGNMDEAVKLLGEMMTVGLSPDRIHYTCLIKGYCLKGDIQNARQAFEEM 461
Query: 210 KKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELKPDVI 389
K + PD++TY +L GL K + F D G+ M++ L+P+ +
Sbjct: 462 LKANVKPDVVTYNILASGLSKRGLVMEVF--DLIGH-------------MEDRGLQPNSL 506
Query: 390 CYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLVNEM 569
Y +ID C+ DNL +A LF+ + E G+ V Y++++ GY G D L +
Sbjct: 507 TYGVVIDGFCRGDNLSEAEVLFNIVEEKGIDNIEVLYSSMVCGYLHKGWTDNAYVLFLRV 566
Query: 570 ESKGIQPDSRTMSTIDRGIARAKKMQFRH*NPCNSHHCRYSTGKNDSP 713
+G D + S + + R Q S C KND P
Sbjct: 567 AKQGKLVDRFSCSKLISDLCRDGNSQGA------STVCSTMLEKNDVP 608
Score = 88.6 bits (218), Expect = 7e-15
Identities = 54/228 (23%), Positives = 98/228 (42%), Gaps = 20/228 (8%)
Frame = +3
Query: 9 GDGPSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREA 188
G P + I LC G + A ++ + + + I + ++++G C L E
Sbjct: 255 GVKPDVHGHSSFIIGLCECGKIDLAYAILQEIIREKVQVEAIAFNVVMDGLCKEMRLEEV 314
Query: 189 LDLFSDMKKRGIGPDIITYTVLLDGLCKV-------SMKRARFQNDAEGNKKVKQV---- 335
L + ++G+ PDI Y+ L+ CKV +A + E N +
Sbjct: 315 EKLLENKVRQGLTPDIYGYSYLIRSYCKVGNLLKVLDHYQAMVSHGLEANCHIMSYLLQC 374
Query: 336 ---------ASAFWCEMKEMELKPDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPD 488
+ ++ + ++ L D + Y +D++CK N+ +A L EM+ GL PD
Sbjct: 375 FTKLGMASQVTEYFQKFRDSGLHIDGVLYNIAMDAYCKLGNMDEAVKLLGEMMTVGLSPD 434
Query: 489 TVTYTALLSGYCKHGDMDKVDTLVNEMESKGIQPDSRTMSTIDRGIAR 632
+ YT L+ GYC GD+ EM ++PD T + + G+++
Sbjct: 435 RIHYTCLIKGYCLKGDIQNARQAFEEMLKANVKPDVVTYNILASGLSK 482
Score = 59.7 bits (143), Expect = 3e-06
Identities = 42/173 (24%), Positives = 77/173 (44%)
Frame = +3
Query: 90 AYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDLFSDMKKRGIGPDIITYTVLLDGLC 269
AYD M L+ D + I+ +A ++ +M + G+ PD+ ++ + GLC
Sbjct: 212 AYDEMKFFRLTLDAHSLRIITRSLFQEKKADKAFKVWVEMIEMGVKPDVHGHSSFIIGLC 271
Query: 270 KVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELKPDVICYTALIDSHCKSDNLQDASS 449
+ K+ +A A E+ +++ + I + ++D CK L++
Sbjct: 272 ECG--------------KI-DLAYAILQEIIREKVQVEAIAFNVVMDGLCKEMRLEEVEK 316
Query: 450 LFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLVNEMESKGIQPDSRTMS 608
L + + GL PD Y+ L+ YCK G++ KV M S G++ + MS
Sbjct: 317 LLENKVRQGLTPDIYGYSYLIRSYCKVGNLLKVLDHYQAMVSHGLEANCHIMS 369
>ref|XP_006663648.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial-like [Oryza brachyantha]
Length = 820
Score = 188 bits (477), Expect = 7e-45
Identities = 94/212 (44%), Positives = 139/212 (65%), Gaps = 2/212 (0%)
Frame = +3
Query: 18 PSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDL 197
P Y KLISA C+ GDM +A+ + MV +GLS D+I YTI++NGYC V L+EA +L
Sbjct: 607 PDVISYSKLISAYCQNGDMDKAQLWFQDMVQRGLSVDVIVYTILMNGYCKVGRLQEACEL 666
Query: 198 FSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKK--VKQVASAFWCEMKEME 371
F M GI PD+I YTVLLDG K ++++ +Q A+ + ++ + MK+M+
Sbjct: 667 FVKMTNLGIMPDVIAYTVLLDGHLKETLQQG-WQGIAKERRSFLLRANHNKLLSSMKDMQ 725
Query: 372 LKPDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVD 551
++PDV CYT LID CK++ L +A LFDEM++ GL PD YTAL++GYC G++ K +
Sbjct: 726 IEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAE 785
Query: 552 TLVNEMESKGIQPDSRTMSTIDRGIARAKKMQ 647
L+ EM + GI+PD+ T S +++ R++K+Q
Sbjct: 786 DLLQEMINNGIEPDALTFSVLNQSYLRSRKIQ 817
Score = 109 bits (273), Expect = 3e-21
Identities = 63/235 (26%), Positives = 111/235 (47%), Gaps = 20/235 (8%)
Frame = +3
Query: 3 SSGDGPSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLR 182
S G P K Y LI+ C G+++ A+ ++ M+ + PDI+TY I+ G+C +
Sbjct: 427 SGGLTPDKIHYTCLINGYCLKGEIQNAQQVFEEMLKANIEPDIVTYNILAGGFCKSGLVM 486
Query: 183 EALDLFSDMKKRGIGPDIITYTVLLDGLCK---VSMKRARFQ-NDAEGNKKVKQVASAFW 350
E DL M G+ P+ +TY + + G C+ +S F + +G ++ + SA
Sbjct: 487 EVFDLLDHMMDHGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNIVEEKGIDHIEVLYSAMV 546
Query: 351 C----------------EMKEMELKPDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLL 482
C + D + LI+ C+ N+Q AS + M+EH ++
Sbjct: 547 CGYLHSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASDVCKIMLEHNVV 606
Query: 483 PDTVTYTALLSGYCKHGDMDKVDTLVNEMESKGIQPDSRTMSTIDRGIARAKKMQ 647
PD ++Y+ L+S YC++GDMDK +M +G+ D + + G + ++Q
Sbjct: 607 PDVISYSKLISAYCQNGDMDKAQLWFQDMVQRGLSVDVIVYTILMNGYCKVGRLQ 661
Score = 95.1 bits (235), Expect = 8e-17
Identities = 56/192 (29%), Positives = 96/192 (50%)
Frame = +3
Query: 18 PSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDL 197
P+ YG I CR G++ A ++ + KG+ + Y+ M+ GY H A L
Sbjct: 502 PNSLTYGIAIVGFCRGGNLSEAEVLFNIVEEKGIDHIEVLYSAMVCGYLHSGWTDHAYML 561
Query: 198 FSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELK 377
F + ++G D + + L++ LC+V + +G V ++ M E +
Sbjct: 562 FVRVARQGNLVDHFSCSKLINDLCRVG--------NVQGASDVCKI-------MLEHNVV 606
Query: 378 PDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTL 557
PDVI Y+ LI ++C++ ++ A F +M++ GL D + YT L++GYCK G + + L
Sbjct: 607 PDVISYSKLISAYCQNGDMDKAQLWFQDMVQRGLSVDVIVYTILMNGYCKVGRLQEACEL 666
Query: 558 VNEMESKGIQPD 593
+M + GI PD
Sbjct: 667 FVKMTNLGIMPD 678
Score = 94.4 bits (233), Expect = 1e-16
Identities = 61/208 (29%), Positives = 96/208 (46%)
Frame = +3
Query: 9 GDGPSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREA 188
G P Y LI + C+ G++ +A Y+ MV+ G+ + + +L + + E
Sbjct: 324 GSIPDVYGYSYLIRSYCKMGNLVKAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEV 383
Query: 189 LDLFSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEM 368
+ F K G+ D + Y + +D CK GN A EMK
Sbjct: 384 IAHFLKFKDSGLHLDKVLYNIAMDAYCK------------HGNMNE---AVMLLNEMKSG 428
Query: 369 ELKPDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKV 548
L PD I YT LI+ +C +Q+A +F+EM++ + PD VTY L G+CK G + +V
Sbjct: 429 GLTPDKIHYTCLINGYCLKGEIQNAQQVFEEMLKANIEPDIVTYNILAGGFCKSGLVMEV 488
Query: 549 DTLVNEMESKGIQPDSRTMSTIDRGIAR 632
L++ M G++P+S T G R
Sbjct: 489 FDLLDHMMDHGLEPNSLTYGIAIVGFCR 516
Score = 89.0 bits (219), Expect = 5e-15
Identities = 51/201 (25%), Positives = 90/201 (44%)
Frame = +3
Query: 33 YGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDLFSDMK 212
Y ++ LC+ + A ++ +G PD+ Y+ ++ YC + L +A+D + M
Sbjct: 297 YNMIMDGLCKEMRLDEAEKLLENKARQGSIPDVYGYSYLIRSYCKMGNLVKAVDHYEAMV 356
Query: 213 KRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELKPDVIC 392
GI + + LL K+ M A + + K+ L D +
Sbjct: 357 SHGIETNCHIVSYLLQCFRKLGMTSE---------------VIAHFLKFKDSGLHLDKVL 401
Query: 393 YTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLVNEME 572
Y +D++CK N+ +A L +EM GL PD + YT L++GYC G++ + EM
Sbjct: 402 YNIAMDAYCKHGNMNEAVMLLNEMKSGGLTPDKIHYTCLINGYCLKGEIQNAQQVFEEML 461
Query: 573 SKGIQPDSRTMSTIDRGIARA 635
I+PD T + + G ++
Sbjct: 462 KANIEPDIVTYNILAGGFCKS 482
Score = 73.6 bits (179), Expect = 2e-10
Identities = 47/197 (23%), Positives = 84/197 (42%)
Frame = +3
Query: 18 PSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDL 197
PS + L+ + +G+ + AY+ M L+PD+ T+ I+ + E L +
Sbjct: 187 PSVWAWNLLLKLIAESGEYEMVLTAYNEMKCVQLTPDVYTFAIVTRSLFQAKKVAEVLQV 246
Query: 198 FSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELK 377
+++M + G+ D Y+ L GLC +A F E+ ++
Sbjct: 247 WAEMTEMGVKLDTRGYSSFLIGLCDCGKY---------------DLAYIFLQEIIREKVP 291
Query: 378 PDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTL 557
+ + Y ++D CK L +A L + G +PD Y+ L+ YCK G++ K
Sbjct: 292 VEAMAYNMIMDGLCKEMRLDEAEKLLENKARQGSIPDVYGYSYLIRSYCKMGNLVKAVDH 351
Query: 558 VNEMESKGIQPDSRTMS 608
M S GI+ + +S
Sbjct: 352 YEAMVSHGIETNCHIVS 368
>gb|ABA95188.1| salt-inducible protein, putative [Oryza sativa Japonica Group]
Length = 938
Score = 186 bits (473), Expect = 2e-44
Identities = 97/220 (44%), Positives = 132/220 (60%), Gaps = 9/220 (4%)
Frame = +3
Query: 18 PSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDL 197
P Y KLIS C+ GDM +A + MV +GLS D+I YTI++NGYC L+EA L
Sbjct: 725 PDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQL 784
Query: 198 FSDMKKRGIGPDIITYTVLLDGLCK---------VSMKRARFQNDAEGNKKVKQVASAFW 350
F M GI PD+I YTVLLDG K ++ +R F A NK +
Sbjct: 785 FVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSS------ 838
Query: 351 CEMKEMELKPDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKH 530
MK+M+++PDV CYT LID CK++ L +A LFDEM++ GL PD YTAL++GYC
Sbjct: 839 --MKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQ 896
Query: 531 GDMDKVDTLVNEMESKGIQPDSRTMSTIDRGIARAKKMQF 650
G++ K + L+ EM KGI+PD T S +++ R++K+QF
Sbjct: 897 GEISKAEDLLQEMIDKGIEPDELTFSVLNQSSLRSRKIQF 936
Score = 99.8 bits (247), Expect = 3e-18
Identities = 63/208 (30%), Positives = 100/208 (48%)
Frame = +3
Query: 9 GDGPSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREA 188
G P Y LI + C+ G++ A Y+ MV+ G+ + + +L + + EA
Sbjct: 442 GSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEA 501
Query: 189 LDLFSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEM 368
+ F K G+ D + Y + +D CK + N+ VK + EMK
Sbjct: 502 IAYFLKFKDSGLHLDKVIYNIAMDTYCK----------NGNMNEAVKLLN-----EMKYG 546
Query: 369 ELKPDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKV 548
L PD I YT LI +C +Q+A +F+EM++ + PD VTY L SG+CK G + +V
Sbjct: 547 GLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEV 606
Query: 549 DTLVNEMESKGIQPDSRTMSTIDRGIAR 632
L++ M +G++P+S T G R
Sbjct: 607 FDLLDRMADQGLEPNSLTYGIAIVGFCR 634
Score = 98.2 bits (243), Expect = 9e-18
Identities = 69/269 (25%), Positives = 117/269 (43%), Gaps = 55/269 (20%)
Frame = +3
Query: 6 SGDGPSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLRE 185
SG K +Y + C+ G+M A + M GL+PD I YT +++GYC ++
Sbjct: 511 SGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQN 570
Query: 186 ALDLFSDMKKRGIGPDIITYTVLLDGLCKVSMKRARF-------QNDAEGNKKVKQVASA 344
A +F +M K I PDI+TY +L G CK + F E N +A
Sbjct: 571 AQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIV 630
Query: 345 FWC---EMKEMELKPDV----------ICYTAL--------------------------- 404
+C + E E+ +V + Y+++
Sbjct: 631 GFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLV 690
Query: 405 --------IDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLV 560
I+ C+ N+Q AS++ M+EH ++PD ++Y+ L+S YC++GDMDK
Sbjct: 691 DHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWF 750
Query: 561 NEMESKGIQPDSRTMSTIDRGIARAKKMQ 647
++M +G+ D + + G +A ++Q
Sbjct: 751 HDMVQRGLSVDVIVYTILMNGYCKAGRLQ 779
Score = 95.9 bits (237), Expect = 4e-17
Identities = 54/201 (26%), Positives = 93/201 (46%)
Frame = +3
Query: 33 YGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDLFSDMK 212
Y ++ LC+ + A ++ +G +PD+ Y+ ++ YC + L A+D + M
Sbjct: 415 YNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMV 474
Query: 213 KRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELKPDVIC 392
GI + + LL K+ M A A++ + K+ L D +
Sbjct: 475 SHGIETNCHIVSYLLQCFRKLGMTSE---------------AIAYFLKFKDSGLHLDKVI 519
Query: 393 YTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLVNEME 572
Y +D++CK+ N+ +A L +EM GL PD + YT L+SGYC G+M + EM
Sbjct: 520 YNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEML 579
Query: 573 SKGIQPDSRTMSTIDRGIARA 635
I+PD T + + G ++
Sbjct: 580 KANIEPDIVTYNILASGFCKS 600
Score = 90.9 bits (224), Expect = 1e-15
Identities = 55/192 (28%), Positives = 96/192 (50%)
Frame = +3
Query: 18 PSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDL 197
P+ YG I CR G++ A ++ + KG+ + Y+ M+ GY A L
Sbjct: 620 PNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYML 679
Query: 198 FSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELK 377
F + ++G D + + L++ LC+V + +G V ++ M E ++
Sbjct: 680 FVRVARQGNLVDHFSCSKLINDLCRVG--------NVQGASNVCKI-------MLEHDVV 724
Query: 378 PDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTL 557
PDVI Y+ LI +C++ ++ A F +M++ GL D + YT L++GYCK G + + L
Sbjct: 725 PDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQL 784
Query: 558 VNEMESKGIQPD 593
+M + GI+PD
Sbjct: 785 FVQMTNLGIKPD 796
Score = 78.6 bits (192), Expect = 7e-12
Identities = 68/265 (25%), Positives = 107/265 (40%), Gaps = 55/265 (20%)
Frame = +3
Query: 18 PSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDL 197
PS + L+ + G+ + AY+ M L+PD+ T+ I+ + EAL +
Sbjct: 305 PSVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQV 364
Query: 198 FSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNK-KVKQVASAFWCEM----K 362
+++M + G+ PD Y+ L GLC + E N+ KV A A+ M K
Sbjct: 365 WAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAMAYNMVMDGLCK 424
Query: 363 EMEL---------------KPDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLP---- 485
EM L PDV Y+ LI S+CK NL +A ++ M+ HG+
Sbjct: 425 EMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHI 484
Query: 486 -------------------------------DTVTYTALLSGYCKHGDMDKVDTLVNEME 572
D V Y + YCK+G+M++ L+NEM+
Sbjct: 485 VSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMK 544
Query: 573 SKGIQPDSRTMSTIDRGIARAKKMQ 647
G+ PD + + G +MQ
Sbjct: 545 YGGLTPDKIHYTCLISGYCLKGEMQ 569
>gb|EEE52515.1| hypothetical protein OsJ_34721 [Oryza sativa Japonica Group]
Length = 820
Score = 186 bits (473), Expect = 2e-44
Identities = 97/220 (44%), Positives = 132/220 (60%), Gaps = 9/220 (4%)
Frame = +3
Query: 18 PSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDL 197
P Y KLIS C+ GDM +A + MV +GLS D+I YTI++NGYC L+EA L
Sbjct: 607 PDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQL 666
Query: 198 FSDMKKRGIGPDIITYTVLLDGLCK---------VSMKRARFQNDAEGNKKVKQVASAFW 350
F M GI PD+I YTVLLDG K ++ +R F A NK +
Sbjct: 667 FVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSS------ 720
Query: 351 CEMKEMELKPDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKH 530
MK+M+++PDV CYT LID CK++ L +A LFDEM++ GL PD YTAL++GYC
Sbjct: 721 --MKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQ 778
Query: 531 GDMDKVDTLVNEMESKGIQPDSRTMSTIDRGIARAKKMQF 650
G++ K + L+ EM KGI+PD T S +++ R++K+QF
Sbjct: 779 GEISKAEDLLQEMIDKGIEPDELTFSVLNQSSLRSRKIQF 818
Score = 99.8 bits (247), Expect = 3e-18
Identities = 63/208 (30%), Positives = 100/208 (48%)
Frame = +3
Query: 9 GDGPSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREA 188
G P Y LI + C+ G++ A Y+ MV+ G+ + + +L + + EA
Sbjct: 324 GSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEA 383
Query: 189 LDLFSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEM 368
+ F K G+ D + Y + +D CK + N+ VK + EMK
Sbjct: 384 IAYFLKFKDSGLHLDKVIYNIAMDTYCK----------NGNMNEAVKLLN-----EMKYG 428
Query: 369 ELKPDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKV 548
L PD I YT LI +C +Q+A +F+EM++ + PD VTY L SG+CK G + +V
Sbjct: 429 GLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEV 488
Query: 549 DTLVNEMESKGIQPDSRTMSTIDRGIAR 632
L++ M +G++P+S T G R
Sbjct: 489 FDLLDRMADQGLEPNSLTYGIAIVGFCR 516
Score = 98.2 bits (243), Expect = 9e-18
Identities = 69/269 (25%), Positives = 117/269 (43%), Gaps = 55/269 (20%)
Frame = +3
Query: 6 SGDGPSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLRE 185
SG K +Y + C+ G+M A + M GL+PD I YT +++GYC ++
Sbjct: 393 SGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQN 452
Query: 186 ALDLFSDMKKRGIGPDIITYTVLLDGLCKVSMKRARF-------QNDAEGNKKVKQVASA 344
A +F +M K I PDI+TY +L G CK + F E N +A
Sbjct: 453 AQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIV 512
Query: 345 FWC---EMKEMELKPDV----------ICYTAL--------------------------- 404
+C + E E+ +V + Y+++
Sbjct: 513 GFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLV 572
Query: 405 --------IDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLV 560
I+ C+ N+Q AS++ M+EH ++PD ++Y+ L+S YC++GDMDK
Sbjct: 573 DHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWF 632
Query: 561 NEMESKGIQPDSRTMSTIDRGIARAKKMQ 647
++M +G+ D + + G +A ++Q
Sbjct: 633 HDMVQRGLSVDVIVYTILMNGYCKAGRLQ 661
Score = 95.9 bits (237), Expect = 4e-17
Identities = 54/201 (26%), Positives = 93/201 (46%)
Frame = +3
Query: 33 YGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDLFSDMK 212
Y ++ LC+ + A ++ +G +PD+ Y+ ++ YC + L A+D + M
Sbjct: 297 YNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMV 356
Query: 213 KRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELKPDVIC 392
GI + + LL K+ M A A++ + K+ L D +
Sbjct: 357 SHGIETNCHIVSYLLQCFRKLGMTSE---------------AIAYFLKFKDSGLHLDKVI 401
Query: 393 YTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLVNEME 572
Y +D++CK+ N+ +A L +EM GL PD + YT L+SGYC G+M + EM
Sbjct: 402 YNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEML 461
Query: 573 SKGIQPDSRTMSTIDRGIARA 635
I+PD T + + G ++
Sbjct: 462 KANIEPDIVTYNILASGFCKS 482
Score = 90.9 bits (224), Expect = 1e-15
Identities = 55/192 (28%), Positives = 96/192 (50%)
Frame = +3
Query: 18 PSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDL 197
P+ YG I CR G++ A ++ + KG+ + Y+ M+ GY A L
Sbjct: 502 PNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYML 561
Query: 198 FSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELK 377
F + ++G D + + L++ LC+V + +G V ++ M E ++
Sbjct: 562 FVRVARQGNLVDHFSCSKLINDLCRVG--------NVQGASNVCKI-------MLEHDVV 606
Query: 378 PDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTL 557
PDVI Y+ LI +C++ ++ A F +M++ GL D + YT L++GYCK G + + L
Sbjct: 607 PDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQL 666
Query: 558 VNEMESKGIQPD 593
+M + GI+PD
Sbjct: 667 FVQMTNLGIKPD 678
Score = 78.6 bits (192), Expect = 7e-12
Identities = 68/265 (25%), Positives = 107/265 (40%), Gaps = 55/265 (20%)
Frame = +3
Query: 18 PSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDL 197
PS + L+ + G+ + AY+ M L+PD+ T+ I+ + EAL +
Sbjct: 187 PSVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQV 246
Query: 198 FSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNK-KVKQVASAFWCEM----K 362
+++M + G+ PD Y+ L GLC + E N+ KV A A+ M K
Sbjct: 247 WAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAMAYNMVMDGLCK 306
Query: 363 EMEL---------------KPDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLP---- 485
EM L PDV Y+ LI S+CK NL +A ++ M+ HG+
Sbjct: 307 EMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHI 366
Query: 486 -------------------------------DTVTYTALLSGYCKHGDMDKVDTLVNEME 572
D V Y + YCK+G+M++ L+NEM+
Sbjct: 367 VSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMK 426
Query: 573 SKGIQPDSRTMSTIDRGIARAKKMQ 647
G+ PD + + G +MQ
Sbjct: 427 YGGLTPDKIHYTCLISGYCLKGEMQ 451
>ref|NP_001047566.1| Os02g0644600 [Oryza sativa Japonica Group]
gi|49387609|dbj|BAD25805.1| pentatricopeptide (PPR)
repeat-containing protein-like [Oryza sativa Japonica
Group] gi|49388661|dbj|BAD25796.1| pentatricopeptide
(PPR) repeat-containing protein-like [Oryza sativa
Japonica Group] gi|113537097|dbj|BAF09480.1|
Os02g0644600 [Oryza sativa Japonica Group]
Length = 526
Score = 186 bits (472), Expect = 2e-44
Identities = 97/220 (44%), Positives = 132/220 (60%), Gaps = 9/220 (4%)
Frame = +3
Query: 18 PSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDL 197
P Y KLIS C+ GDM +A + MV +GLS D+I YTI++NGYC L+EA L
Sbjct: 313 PDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQL 372
Query: 198 FSDMKKRGIGPDIITYTVLLDGLCK---------VSMKRARFQNDAEGNKKVKQVASAFW 350
F M GI PD+I YTVLLDG K ++ +R F A NK +
Sbjct: 373 FVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSS------ 426
Query: 351 CEMKEMELKPDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKH 530
MK+M+++PDV CYT LID CK++ L +A LFDEM++ GL PD YTAL++GYC
Sbjct: 427 --MKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQ 484
Query: 531 GDMDKVDTLVNEMESKGIQPDSRTMSTIDRGIARAKKMQF 650
G++ K + L+ EM KGI+PD T S +++ R++K+QF
Sbjct: 485 GEISKAEDLLQEMIDKGIEPDELTFSVLNQSSLRSRKIQF 524
Score = 100 bits (250), Expect = 1e-18
Identities = 70/269 (26%), Positives = 116/269 (43%), Gaps = 55/269 (20%)
Frame = +3
Query: 6 SGDGPSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLRE 185
SG K +Y + C+ G+M A + M GL+PD I YT ++NGYC ++
Sbjct: 99 SGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQN 158
Query: 186 ALDLFSDMKKRGIGPDIITYTVLLDGLCKVSMKRARF-------QNDAEGNKKVKQVASA 344
A +F +M K I PDI+TY +L G CK + F + E N +A
Sbjct: 159 AQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADHGLEPNSLTYGIAIV 218
Query: 345 FWC---EMKEMELKPDVI------------------------------------------ 389
+C + E E+ +V+
Sbjct: 219 GFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLV 278
Query: 390 ---CYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLV 560
+ LI+ C+ N+Q AS++ M+EH ++PD ++Y+ L+S YC++GDMDK
Sbjct: 279 DHFSCSKLINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWF 338
Query: 561 NEMESKGIQPDSRTMSTIDRGIARAKKMQ 647
++M +G+ D + + G +A ++Q
Sbjct: 339 HDMVQRGLSIDVIVYTILMNGYCKAGRLQ 367
Score = 98.2 bits (243), Expect = 9e-18
Identities = 62/208 (29%), Positives = 100/208 (48%)
Frame = +3
Query: 9 GDGPSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREA 188
G P Y LI + C+ G++ +A Y+ MV+ G+ + + +L + + E
Sbjct: 30 GSNPDVYGYSYLIQSYCKMGNLIKAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEV 89
Query: 189 LDLFSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEM 368
+ F K G+ D + Y + +D CK + N+ VK + EMK
Sbjct: 90 IAYFLKFKDSGLHLDKVIYNIAMDTYCK----------NGNMNEAVKLLN-----EMKCG 134
Query: 369 ELKPDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKV 548
L PD I YT LI+ +C +Q+A +F+EM++ + PD VTY L SG+CK G + +V
Sbjct: 135 GLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEV 194
Query: 549 DTLVNEMESKGIQPDSRTMSTIDRGIAR 632
L++ M G++P+S T G R
Sbjct: 195 FDLLDRMADHGLEPNSLTYGIAIVGFCR 222
Score = 92.8 bits (229), Expect = 4e-16
Identities = 52/201 (25%), Positives = 93/201 (46%)
Frame = +3
Query: 33 YGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDLFSDMK 212
Y ++ LC+ + A ++ +G +PD+ Y+ ++ YC + L +A+D + M
Sbjct: 3 YNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEAMV 62
Query: 213 KRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELKPDVIC 392
GI + + LL K+ M A++ + K+ L D +
Sbjct: 63 SHGIETNCHIVSYLLQCFRKLGMTSE---------------VIAYFLKFKDSGLHLDKVI 107
Query: 393 YTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTLVNEME 572
Y +D++CK+ N+ +A L +EM GL PD + YT L++GYC G+M + EM
Sbjct: 108 YNIAMDTYCKNGNMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEML 167
Query: 573 SKGIQPDSRTMSTIDRGIARA 635
I+PD T + + G ++
Sbjct: 168 KANIEPDIVTYNILASGFCKS 188
Score = 89.7 bits (221), Expect = 3e-15
Identities = 55/192 (28%), Positives = 95/192 (49%)
Frame = +3
Query: 18 PSKKMYGKLISALCRAGDMKRARWAYDHMVNKGLSPDIITYTIMLNGYCHVNCLREALDL 197
P+ YG I CR G++ A ++ + KG+ + Y+ M+ GY A L
Sbjct: 208 PNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYML 267
Query: 198 FSDMKKRGIGPDIITYTVLLDGLCKVSMKRARFQNDAEGNKKVKQVASAFWCEMKEMELK 377
F + ++G D + + L++ LC+V + +G V ++ M E +
Sbjct: 268 FVRVARQGNLVDHFSCSKLINDLCRVG--------NVQGASNVCKI-------MLEHNVV 312
Query: 378 PDVICYTALIDSHCKSDNLQDASSLFDEMIEHGLLPDTVTYTALLSGYCKHGDMDKVDTL 557
PDVI Y+ LI +C++ ++ A F +M++ GL D + YT L++GYCK G + + L
Sbjct: 313 PDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQL 372
Query: 558 VNEMESKGIQPD 593
+M + GI+PD
Sbjct: 373 FVQMTNLGIKPD 384