BLASTX nr result
ID: Rehmannia25_contig00000066
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00000066
(542 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAX19931.1| viral replicase [Nandina mosaic virus] 305 3e-81
dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica ... 300 1e-79
dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica ... 300 1e-79
dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica ... 300 1e-79
dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica ... 300 1e-79
dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica ... 300 1e-79
dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica ... 300 1e-79
dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica ... 300 2e-79
gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago a... 296 3e-78
ref|NP_620836.1| replicase [Plantago asiatica mosaic virus] gi|1... 289 3e-76
ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X] gi... 256 3e-66
gb|ADE10202.1| viral replicase [Hydrangea ringspot virus] 228 5e-58
ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|5... 228 5e-58
ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mo... 226 3e-57
ref|NP_077079.1| replicase [Clover yellow mosaic virus] 214 1e-53
ref|YP_004849314.1| replicase [Tamus red mosaic virus] gi|345548... 211 9e-53
ref|YP_002647027.1| replicase [Allium virus X] gi|224579235|gb|A... 207 1e-51
ref|NP_044330.1| replicase [Papaya mosaic virus] gi|139137|sp|P2... 205 6e-51
gb|ACO35593.1| RNA-dependent RNA polymerase [Alternanthera mosai... 204 1e-50
ref|YP_002341559.1| replication-associated protein [Schlumberger... 204 1e-50
>gb|AAX19931.1| viral replicase [Nandina mosaic virus]
Length = 1368
Score = 305 bits (782), Expect = 3e-81
Identities = 156/180 (86%), Positives = 158/180 (87%)
Frame = -3
Query: 540 KAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQ 361
KAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDS HFVNSNAQ
Sbjct: 820 KAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSNHFVNSNAQ 879
Query: 360 SSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXPVEDKTTTLDDFKE 181
SSAFWEKLEATPYLKTFLSLVREDKIEEFS PVE+ TT LDDF+E
Sbjct: 880 SSAFWEKLEATPYLKTFLSLVREDKIEEFSAPPDPPKSVMPPVTHFPVEECTTALDDFRE 939
Query: 180 SLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIE 1
L DKFDREIFTEAHGHTNCVQ DDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIE
Sbjct: 940 ELHDKFDREIFTEAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIE 999
>dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 300 bits (769), Expect = 1e-79
Identities = 152/179 (84%), Positives = 155/179 (86%)
Frame = -3
Query: 540 KAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQ 361
KAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQ
Sbjct: 832 KAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQ 891
Query: 360 SSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXPVEDKTTTLDDFKE 181
SSAFWEKLEATPYLKTFLSLVREDKIEEF+ PVED TTTLDDFKE
Sbjct: 892 SSAFWEKLEATPYLKTFLSLVREDKIEEFTAIPAEAKHVAPPCTHFPVEDGTTTLDDFKE 951
Query: 180 SLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANI 4
L DKFDREIF AHGHTNCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S PEAN+
Sbjct: 952 ELRDKFDREIFNPAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANL 1010
>dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 300 bits (769), Expect = 1e-79
Identities = 152/179 (84%), Positives = 155/179 (86%)
Frame = -3
Query: 540 KAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQ 361
KAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQ
Sbjct: 832 KAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQ 891
Query: 360 SSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXPVEDKTTTLDDFKE 181
SSAFWEKLEATPYLKTFLSLVREDKIEEF+ PVED TTTLDDFKE
Sbjct: 892 SSAFWEKLEATPYLKTFLSLVREDKIEEFTAIPAEAKHVAPPCTHFPVEDGTTTLDDFKE 951
Query: 180 SLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANI 4
L DKFDREIF AHGHTNCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S PEAN+
Sbjct: 952 ELRDKFDREIFNPAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANL 1010
>dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 300 bits (769), Expect = 1e-79
Identities = 152/179 (84%), Positives = 155/179 (86%)
Frame = -3
Query: 540 KAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQ 361
KAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQ
Sbjct: 832 KAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQ 891
Query: 360 SSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXPVEDKTTTLDDFKE 181
SSAFWEKLEATPYLKTFLSLVREDKIEEF+ PVED TTTLDDFKE
Sbjct: 892 SSAFWEKLEATPYLKTFLSLVREDKIEEFTAIPAEAKHVAPPCTHFPVEDGTTTLDDFKE 951
Query: 180 SLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANI 4
L DKFDREIF AHGHTNCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S PEAN+
Sbjct: 952 ELRDKFDREIFNPAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANL 1010
>dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 300 bits (769), Expect = 1e-79
Identities = 152/179 (84%), Positives = 155/179 (86%)
Frame = -3
Query: 540 KAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQ 361
KAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQ
Sbjct: 832 KAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQ 891
Query: 360 SSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXPVEDKTTTLDDFKE 181
SSAFWEKLEATPYLKTFLSLVREDKIEEF+ PVED TTTLDDFKE
Sbjct: 892 SSAFWEKLEATPYLKTFLSLVREDKIEEFTAIPAEAKRVAPPCTHFPVEDGTTTLDDFKE 951
Query: 180 SLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANI 4
L DKFDREIF AHGHTNCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S PEAN+
Sbjct: 952 ELRDKFDREIFNPAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANL 1010
>dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 300 bits (769), Expect = 1e-79
Identities = 152/179 (84%), Positives = 155/179 (86%)
Frame = -3
Query: 540 KAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQ 361
KAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQ
Sbjct: 832 KAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQ 891
Query: 360 SSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXPVEDKTTTLDDFKE 181
SSAFWEKLEATPYLKTFLSLVREDKIEEF+ PVED TTTLDDFKE
Sbjct: 892 SSAFWEKLEATPYLKTFLSLVREDKIEEFTAIPAEAKRVAPPCTHFPVEDGTTTLDDFKE 951
Query: 180 SLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANI 4
L DKFDREIF AHGHTNCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S PEAN+
Sbjct: 952 ELRDKFDREIFNPAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANL 1010
>dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 300 bits (769), Expect = 1e-79
Identities = 152/179 (84%), Positives = 155/179 (86%)
Frame = -3
Query: 540 KAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQ 361
KAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQ
Sbjct: 832 KAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQ 891
Query: 360 SSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXPVEDKTTTLDDFKE 181
SSAFWEKLEATPYLKTFLSLVREDKIEEF+ PVED TTTLDDFKE
Sbjct: 892 SSAFWEKLEATPYLKTFLSLVREDKIEEFTAIPAEAKRVAPPCTHFPVEDGTTTLDDFKE 951
Query: 180 SLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANI 4
L DKFDREIF AHGHTNCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S PEAN+
Sbjct: 952 ELRDKFDREIFNPAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANL 1010
>dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 300 bits (767), Expect = 2e-79
Identities = 152/179 (84%), Positives = 154/179 (86%)
Frame = -3
Query: 540 KAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQ 361
KAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQ
Sbjct: 832 KAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQ 891
Query: 360 SSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXPVEDKTTTLDDFKE 181
SSAFWEKLEATPYLKTFLSLVREDKIEEF+ PVED TTTLDDFKE
Sbjct: 892 SSAFWEKLEATPYLKTFLSLVREDKIEEFTATTAEAKPVAPPCTHFPVEDGTTTLDDFKE 951
Query: 180 SLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANI 4
L DKFDREIF HGHTNCVQ DDPTTQLFSHQQAKDEALLWETI ARLTIS PEAN+
Sbjct: 952 ELHDKFDREIFNPTHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINARLTISNPEANL 1010
>gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
virus]
Length = 711
Score = 296 bits (757), Expect = 3e-78
Identities = 147/179 (82%), Positives = 156/179 (87%)
Frame = -3
Query: 540 KAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQ 361
KAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHF+NSNAQ
Sbjct: 163 KAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFINSNAQ 222
Query: 360 SSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXPVEDKTTTLDDFKE 181
SSAFWEKLEATPYLKTFLSLVRED++ EFS PVED TTTLDDF+E
Sbjct: 223 SSAFWEKLEATPYLKTFLSLVREDRVAEFSASPADPTPVAPPCTHFPVEDGTTTLDDFRE 282
Query: 180 SLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANI 4
L DKFDREIF +AHGHTNCVQ D+PTTQLF+HQQAKDEALLWETI ARLTIS+PEAN+
Sbjct: 283 ELQDKFDREIFNQAHGHTNCVQTDNPTTQLFAHQQAKDEALLWETINARLTISSPEANL 341
>ref|NP_620836.1| replicase [Plantago asiatica mosaic virus]
gi|1173174|sp|Q07518.1|RDRP_P1AMV RecName: Full=RNA
replication protein; AltName: Full=156 kDa protein;
AltName: Full=ORF1 protein; Includes: RecName:
Full=RNA-directed RNA polymerase; Includes: RecName:
Full=Helicase gi|311645|emb|CAA79761.1| 156K-protein
[Plantago asiatica mosaic virus]
Length = 1385
Score = 289 bits (740), Expect = 3e-76
Identities = 147/180 (81%), Positives = 152/180 (84%)
Frame = -3
Query: 540 KAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQ 361
KAAFTDAGHKVS+YAGCQGITAP+VQILLDNDTTMCTKEVLYTALSRAVDSIHFVN+NAQ
Sbjct: 837 KAAFTDAGHKVSSYAGCQGITAPKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNTNAQ 896
Query: 360 SSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXPVEDKTTTLDDFKE 181
SSAFWEKLEATPYLKTFLSLVREDKI EF PVE+ TTLDDFKE
Sbjct: 897 SSAFWEKLEATPYLKTFLSLVREDKITEFQAPADAPKPVTPPVTHFPVEEPATTLDDFKE 956
Query: 180 SLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIE 1
L DKFDREIFT GHTNCVQ DDPTTQLFSHQQAKDEALLWE I+ARL ISTPEANIE
Sbjct: 957 ELRDKFDREIFTSDRGHTNCVQTDDPTTQLFSHQQAKDEALLWEMIRARLKISTPEANIE 1016
>ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X]
gi|23491554|dbj|BAC16785.1| RNA-dependent RNA polymerase
[Tulip virus X]
Length = 1361
Score = 256 bits (653), Expect = 3e-66
Identities = 130/179 (72%), Positives = 145/179 (81%)
Frame = -3
Query: 540 KAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQ 361
KAAF DAGHKVSTYAGCQGITAP+VQILLD+DTTMC+ EVLYTALSRAVDSIHF+NSNAQ
Sbjct: 813 KAAFADAGHKVSTYAGCQGITAPKVQILLDSDTTMCSSEVLYTALSRAVDSIHFINSNAQ 872
Query: 360 SSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXPVEDKTTTLDDFKE 181
SSAFWEKLEATPYLKTFLSLVRE K+EEF+ PVE+ + TL ++
Sbjct: 873 SSAFWEKLEATPYLKTFLSLVREHKLEEFTAVEDPPQEVAPPVTHFPVENASHTLGLIQD 932
Query: 180 SLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANI 4
SL+DK+DREI HG TNCVQ +D T QLFSHQQAKDEALLWETI ARL +STPEAN+
Sbjct: 933 SLADKYDREILNTNHGFTNCVQTEDLTVQLFSHQQAKDEALLWETIDARLRLSTPEANL 991
>gb|ADE10202.1| viral replicase [Hydrangea ringspot virus]
Length = 1386
Score = 228 bits (582), Expect = 5e-58
Identities = 115/180 (63%), Positives = 133/180 (73%)
Frame = -3
Query: 540 KAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQ 361
K+A+ + GHKVSTYAGCQGITAP++QILLDNDT MC+KEVLYTALSRAV SIHF+N+
Sbjct: 839 KSAYGEMGHKVSTYAGCQGITAPKIQILLDNDTVMCSKEVLYTALSRAVHSIHFINTGPT 898
Query: 360 SSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXPVEDKTTTLDDFKE 181
S+FWEKLEATPYLK FLS VRE+ I PVE+ + L + E
Sbjct: 899 HSSFWEKLEATPYLKAFLSTVREEAIAAHQLPNADPRPDPEPKTHFPVENTSCALGAYME 958
Query: 180 SLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIE 1
+ +KF+REIFTE GHTNCVQ +P QLF HQQAKDEALLWETIKARLTIS+PEAN E
Sbjct: 959 KVPEKFEREIFTEDRGHTNCVQTQNPLVQLFPHQQAKDEALLWETIKARLTISSPEANWE 1018
>ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|56792005|gb|AAW30448.1|
viral replicase [Hydrangea ringspot virus]
Length = 1386
Score = 228 bits (582), Expect = 5e-58
Identities = 115/180 (63%), Positives = 133/180 (73%)
Frame = -3
Query: 540 KAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQ 361
K+A+ + GHKVSTYAGCQGITAP++QILLDNDT MC+KEVLYTALSRAV SIHF+N+
Sbjct: 839 KSAYGEMGHKVSTYAGCQGITAPKIQILLDNDTVMCSKEVLYTALSRAVHSIHFINTGPT 898
Query: 360 SSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXPVEDKTTTLDDFKE 181
S+FWEKLEATPYLK FLS VRE+ I PVE+ + L + E
Sbjct: 899 HSSFWEKLEATPYLKAFLSTVREEAIAAHQLPSADPRPDPEPKTHFPVENTSCALGAYME 958
Query: 180 SLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIE 1
+ +KF+REIFTE GHTNCVQ +P QLF HQQAKDEALLWETIKARLTIS+PEAN E
Sbjct: 959 KVPEKFEREIFTEDRGHTNCVQTQNPLVQLFPHQQAKDEALLWETIKARLTISSPEANWE 1018
>ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mosaic virus]
gi|773405|gb|AAC54775.1| ORF 1; putative RNA dependent
RNA polymerase [Cassava common mosaic virus]
gi|1587823|prf||2207297A ORF 1
Length = 1449
Score = 226 bits (575), Expect = 3e-57
Identities = 115/178 (64%), Positives = 135/178 (75%)
Frame = -3
Query: 540 KAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQ 361
KAAF++AGHK STYAGCQGITA ++QILLD++T MC++EVLYTALSRAVDSIHF+N+
Sbjct: 907 KAAFSEAGHKTSTYAGCQGITARKLQILLDSNTPMCSQEVLYTALSRAVDSIHFINTAPT 966
Query: 360 SSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXPVEDKTTTLDDFKE 181
SS FWEKLEATPYLKTFLS+VREDKI E+ PVE+ T L++F E
Sbjct: 967 SSNFWEKLEATPYLKTFLSMVREDKILEWRPKEPEPAKEEPPKTHFPVENGNTILEEFTE 1026
Query: 180 SLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEAN 7
L+ K +REIF E+HGHTNCVQ D+ Q SHQQAKDEALLWETIKARL IS + N
Sbjct: 1027 ELAQKHEREIFNESHGHTNCVQTDNKIIQTLSHQQAKDEALLWETIKARLVISHKQHN 1084
>ref|NP_077079.1| replicase [Clover yellow mosaic virus]
Length = 1670
Score = 214 bits (545), Expect = 1e-53
Identities = 102/180 (56%), Positives = 135/180 (75%)
Frame = -3
Query: 540 KAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQ 361
K ++T+ G+K STYAGCQGITA RVQ+LLD DTT+C+ +VLYTALSRAV ++HF+N++A
Sbjct: 1128 KRSYTEMGYKTSTYAGCQGITADRVQVLLDTDTTLCSDQVLYTALSRAVHAVHFINTSAT 1187
Query: 360 SSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXPVEDKTTTLDDFKE 181
SSAFW+KL +TPYLKTFLS +RED++ E PVE++ +L+D E
Sbjct: 1188 SSAFWDKLNSTPYLKTFLSTLREDRLREEGPKPETPEEPKPATTHFPVENENLSLEDKVE 1247
Query: 180 SLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIE 1
L +K +RE+++ HG++NCVQ DDP QLFSHQQAKD+ LLW TI+ARL IS P+AN+E
Sbjct: 1248 ELLEKHERELYSSDHGYSNCVQTDDPVVQLFSHQQAKDQTLLWATIEARLKISNPKANME 1307
>ref|YP_004849314.1| replicase [Tamus red mosaic virus] gi|345548097|gb|AEO12140.1|
replicase [Tamus red mosaic virus]
Length = 1501
Score = 211 bits (537), Expect = 9e-53
Identities = 105/179 (58%), Positives = 128/179 (71%)
Frame = -3
Query: 540 KAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQ 361
K +T+ G+K STYAGCQGITAP+VQ+LL++DTT+CT +VLYTALSRAV SIHF+N++A
Sbjct: 959 KKTYTELGYKTSTYAGCQGITAPKVQVLLNSDTTLCTDKVLYTALSRAVHSIHFINTSAS 1018
Query: 360 SSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXPVEDKTTTLDDFKE 181
S+AFW+KL ATPYLKTFLS VRE + PVE+ L+ E
Sbjct: 1019 SAAFWDKLNATPYLKTFLSTVREQSLASAKPREEGPTPVAAPKTHVPVENSNLCLEGAVE 1078
Query: 180 SLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANI 4
L +K DREIF HGH+NCVQ D+PT QL SHQQAKD+ LLW TI+ARL ISTPE N+
Sbjct: 1079 KLLEKHDREIFRADHGHSNCVQTDNPTIQLSSHQQAKDQTLLWATIEARLKISTPERNL 1137
>ref|YP_002647027.1| replicase [Allium virus X] gi|224579235|gb|ACN58194.1| replicase
[Allium virus X]
Length = 1701
Score = 207 bits (527), Expect = 1e-51
Identities = 104/179 (58%), Positives = 125/179 (69%)
Frame = -3
Query: 540 KAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQ 361
K + + G+K STYAGCQGITAPR+QILLD DTT+C EVLYTALSRAV IHF+N+ A
Sbjct: 1160 KRTYMELGYKTSTYAGCQGITAPRLQILLDCDTTLCADEVLYTALSRAVHGIHFINTGAT 1219
Query: 360 SSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXPVEDKTTTLDDFKE 181
S AFW+KL ATPYLKTFL RE++++E PVE++ L++ E
Sbjct: 1220 SGAFWDKLNATPYLKTFLDFTREERLKESQPREQEPTEPEGPTTHFPVENEKFVLEEQVE 1279
Query: 180 SLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANI 4
L +K DREI HGHTNCVQ +D QLFSHQQAKD+ALLW TI+ARL IS P+ANI
Sbjct: 1280 ELLEKHDREILRPDHGHTNCVQTEDAVIQLFSHQQAKDQALLWATIEARLKISNPKANI 1338
>ref|NP_044330.1| replicase [Papaya mosaic virus] gi|139137|sp|P20951.1|RDRP_PMV
RecName: Full=RNA replication protein; AltName: Full=176
kDa protein; AltName: Full=ORF1 protein; Includes:
RecName: Full=RNA-directed RNA polymerase; Includes:
RecName: Full=Helicase gi|222331|dbj|BAA03050.1| unnamed
protein product [Papaya mosaic virus]
gi|409915202|gb|AFV46461.1| replicase [Papaya mosaic
virus]
Length = 1547
Score = 205 bits (521), Expect = 6e-51
Identities = 98/178 (55%), Positives = 126/178 (70%)
Frame = -3
Query: 540 KAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQ 361
K AF++ GHKVSTYAGCQGITAP++QILL +T++C++EVLYTALSRAV SIHFVN++
Sbjct: 994 KQAFSEMGHKVSTYAGCQGITAPKIQILLTEETSLCSREVLYTALSRAVHSIHFVNASPN 1053
Query: 360 SSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXPVEDKTTTLDDFKE 181
+ AFW+KLE TPYLK FLS +RE+ + ED ++ E
Sbjct: 1054 NQAFWKKLECTPYLKAFLSTLREEVAQPIEEKKAEPTPVEPPRTHIAKEDAMVEYENVIE 1113
Query: 180 SLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEAN 7
+ +K +REIF+E HGH+NCVQ +DP Q+FSHQQAKD+ LLW TI+ARL IS P+AN
Sbjct: 1114 KMPEKHEREIFSEKHGHSNCVQTEDPFIQMFSHQQAKDDTLLWATIEARLVISNPKAN 1171
>gb|ACO35593.1| RNA-dependent RNA polymerase [Alternanthera mosaic virus]
Length = 1541
Score = 204 bits (519), Expect = 1e-50
Identities = 100/178 (56%), Positives = 124/178 (69%)
Frame = -3
Query: 540 KAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQ 361
K AF++ GHKVSTYAGCQG+TAPRVQILL +T+MC++EV+YTALSRAV SIHFVN +
Sbjct: 988 KQAFSEMGHKVSTYAGCQGLTAPRVQILLSEETSMCSREVIYTALSRAVHSIHFVNCSPN 1047
Query: 360 SSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXPVEDKTTTLDDFKE 181
+ AFW KLE+TPYLK FLS +RED PV+ +D E
Sbjct: 1048 NQAFWAKLESTPYLKAFLSTLREDAAPVVKPKEEAPAPVDPPKTHIPVDSAMPIYEDILE 1107
Query: 180 SLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEAN 7
+ +K +REIF+E HGH+NCVQ +D Q+FSHQQAKDE LLW TI+ARL +S P+AN
Sbjct: 1108 QMPEKHEREIFSEKHGHSNCVQTEDTFVQMFSHQQAKDETLLWATIEARLVLSNPKAN 1165
>ref|YP_002341559.1| replication-associated protein [Schlumbergera virus X]
gi|217316801|gb|AAR11537.2| replication-associated
protein [Schlumbergera virus X]
Length = 1545
Score = 204 bits (518), Expect = 1e-50
Identities = 99/180 (55%), Positives = 124/180 (68%)
Frame = -3
Query: 540 KAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQ 361
K A+ + GHKVSTYAGCQGITAP +QIL+DNDT MC+++V+YTALSRAV +IHFVN+
Sbjct: 1002 KQAYGEMGHKVSTYAGCQGITAPEIQILIDNDTPMCSQQVMYTALSRAVHAIHFVNTGVT 1061
Query: 360 SSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXPVEDKTTTLDDFKE 181
+ AFWEKL ATPYL FL LVRE+K + S PVE+ D E
Sbjct: 1062 NDAFWEKLAATPYLAAFLRLVREEKTRQPSPTEDPPAQPPAPETHFPVENPKNFFDKIIE 1121
Query: 180 SLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIE 1
++ DK RE+F+E GH+NCVQ +DP Q+F HQQA+DE L W TI+ARL +S+PE N E
Sbjct: 1122 NMPDKHSRELFSEKDGHSNCVQTEDPIVQMFPHQQARDETLFWATIEARLKVSSPEKNFE 1181