BLASTX nr result
ID: Rehmannia25_contig00000003
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00000003
(1304 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAX19935.1| coat protein [Nandina mosaic virus] 386 e-105
dbj|BAG12127.1| coat protein [Plantago asiatica mosaic virus] gi... 382 e-103
dbj|BAG12157.1| coat protein [Plantago asiatica mosaic virus] 380 e-103
ref|NP_620840.1| capsid protein [Plantago asiatica mosaic virus]... 377 e-102
dbj|BAG12142.1| coat protein [Plantago asiatica mosaic virus] 377 e-102
gb|AGW45385.1| coat protein [Plantago asiatica mosaic virus] 374 e-101
ref|NP_702992.1| coat protein [Tulip virus X] gi|23491558|dbj|BA... 336 1e-89
gb|ACE62921.1| coat protein [Tulip virus X] 332 2e-88
gb|AAW30636.1| coat protein [Tulip virus X] 271 4e-70
ref|NP_042699.1| coat protein [Cassava common mosaic virus] gi|7... 224 6e-56
ref|YP_224088.1| coat protein [Hydrangea ringspot virus] gi|5679... 208 5e-51
gb|ADE10206.1| coat protein [Hydrangea ringspot virus] 206 2e-50
ref|YP_004849318.1| coat protein [Tamus red mosaic virus] gi|345... 184 5e-44
ref|YP_054406.1| coat protein [Zygocactus virus X] gi|38146351|g... 176 2e-41
gb|AFU63340.1| coat protein [Alternanthera mosaic virus] 175 4e-41
gb|AFB81318.1| coat protein [Alternanthera mosaic virus] 173 2e-40
gb|AAG52893.1| coat protein [Papaya mosaic virus] 172 3e-40
gb|AFB81325.1| coat protein [Alternanthera mosaic virus] 172 4e-40
ref|YP_459948.1| coat protein [Alternanthera mosaic virus] gi|62... 171 5e-40
gb|AAG52896.1| coat protein [Papaya mosaic virus] 171 5e-40
>gb|AAX19935.1| coat protein [Nandina mosaic virus]
Length = 207
Score = 386 bits (992), Expect = e-105
Identities = 192/207 (92%), Positives = 200/207 (96%)
Frame = +2
Query: 620 MALNKAPTADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFD 799
MAL APT DALAAMTFQVSSPSVPTA EL TI++GLTT+G+P DGLLSHALAVVNACFD
Sbjct: 1 MALTAAPTTDALAAMTFQVSSPSVPTASELNTITQGLTTIGVPTDGLLSHALAVVNACFD 60
Query: 800 AGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKVIWNARLARNLPPAGFAR 979
AGSS FVTLSGPSPTATISLAQ+AGVIKVTTTLRKFCR+YAK+IWNARLARNLPPAGFAR
Sbjct: 61 AGSSTFVTLSGPSPTATISLAQIAGVIKVTTTLRKFCRFYAKIIWNARLARNLPPAGFAR 120
Query: 980 ANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNL 1159
ANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNL
Sbjct: 121 ANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNL 180
Query: 1160 ASTSTQFTRGQLSNTAPQVQFLPAPSD 1240
ASTSTQFTRGQLS+TAPQVQFLPAPSD
Sbjct: 181 ASTSTQFTRGQLSSTAPQVQFLPAPSD 207
>dbj|BAG12127.1| coat protein [Plantago asiatica mosaic virus]
gi|169219481|dbj|BAG12132.1| coat protein [Plantago
asiatica mosaic virus] gi|169219487|dbj|BAG12137.1| coat
protein [Plantago asiatica mosaic virus]
gi|169219499|dbj|BAG12147.1| coat protein [Plantago
asiatica mosaic virus] gi|169219505|dbj|BAG12152.1| coat
protein [Plantago asiatica mosaic virus]
Length = 207
Score = 382 bits (980), Expect = e-103
Identities = 188/207 (90%), Positives = 202/207 (97%)
Frame = +2
Query: 620 MALNKAPTADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFD 799
MALN+APT+DAL AMTF VSSPSVPTAEEL TI++GLTTLG+PAD LLSHALAVVNACFD
Sbjct: 1 MALNQAPTSDALNAMTFAVSSPSVPTAEELATITQGLTTLGVPADSLLSHALAVVNACFD 60
Query: 800 AGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKVIWNARLARNLPPAGFAR 979
AGSSAFVTLSGPSPTATISLAQ+AGV+KVTTTLRKFCR+YAK+IWNARL+RNLPPAGFAR
Sbjct: 61 AGSSAFVTLSGPSPTATISLAQIAGVVKVTTTLRKFCRFYAKIIWNARLSRNLPPAGFAR 120
Query: 980 ANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNL 1159
ANIKFEHRWAGFDFFDGLLNPAALEP+GGL+RTPTPDEVTANETARSLNLFEARA+SSNL
Sbjct: 121 ANIKFEHRWAGFDFFDGLLNPAALEPIGGLTRTPTPDEVTANETARSLNLFEARASSSNL 180
Query: 1160 ASTSTQFTRGQLSNTAPQVQFLPAPSD 1240
ASTSTQFTRG LSNTAPQVQFLP+PSD
Sbjct: 181 ASTSTQFTRGHLSNTAPQVQFLPSPSD 207
>dbj|BAG12157.1| coat protein [Plantago asiatica mosaic virus]
Length = 207
Score = 380 bits (977), Expect = e-103
Identities = 187/207 (90%), Positives = 202/207 (97%)
Frame = +2
Query: 620 MALNKAPTADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFD 799
MALN+APT+DAL AMTF VSSPSVPTA EL TI++GLTTLG+PAD LLSHALAVVNACFD
Sbjct: 1 MALNQAPTSDALNAMTFDVSSPSVPTAAELATITQGLTTLGVPADSLLSHALAVVNACFD 60
Query: 800 AGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKVIWNARLARNLPPAGFAR 979
AGSSAFVTLSGPSPTATISLAQ+AGV+KVTTTLRKFCR+YAK+IWNARL+RNLPPAGFAR
Sbjct: 61 AGSSAFVTLSGPSPTATISLAQIAGVVKVTTTLRKFCRFYAKIIWNARLSRNLPPAGFAR 120
Query: 980 ANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNL 1159
ANIKFEHRWAGFDFFDGLLNPAALEP+GGL+RTPTPDEVTANETARSLNLFEARA++SNL
Sbjct: 121 ANIKFEHRWAGFDFFDGLLNPAALEPIGGLTRTPTPDEVTANETARSLNLFEARASNSNL 180
Query: 1160 ASTSTQFTRGQLSNTAPQVQFLPAPSD 1240
ASTSTQFTRGQLSNTAPQVQFLP+PSD
Sbjct: 181 ASTSTQFTRGQLSNTAPQVQFLPSPSD 207
>ref|NP_620840.1| capsid protein [Plantago asiatica mosaic virus]
gi|1168989|sp|Q07506.1|COAT_P1AMV RecName: Full=Coat
protein; AltName: Full=Capsid protein; Short=CP
gi|311649|emb|CAA79765.1| capsid protein [Plantago
asiatica mosaic virus]
Length = 207
Score = 377 bits (969), Expect = e-102
Identities = 187/207 (90%), Positives = 198/207 (95%)
Frame = +2
Query: 620 MALNKAPTADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFD 799
MALN APTADALAAM F VSSPSVPTA+EL+TI+ GLTTLG+P D LLSHALA+VNACFD
Sbjct: 1 MALNTAPTADALAAMAFPVSSPSVPTAQELDTITSGLTTLGVPTDSLLSHALALVNACFD 60
Query: 800 AGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKVIWNARLARNLPPAGFAR 979
AGSS+FVTLSGPSPT TISLAQ+AGV+KVTTTLRKFCR+YAK+IWNARLARNLPPAGFAR
Sbjct: 61 AGSSSFVTLSGPSPTPTISLAQIAGVVKVTTTLRKFCRFYAKIIWNARLARNLPPAGFAR 120
Query: 980 ANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNL 1159
ANIKFEHRWAGFDFFDGLLNPAALEP GGLSRTPTPDEVTANETARSLNLFEARA+ SNL
Sbjct: 121 ANIKFEHRWAGFDFFDGLLNPAALEPPGGLSRTPTPDEVTANETARSLNLFEARASYSNL 180
Query: 1160 ASTSTQFTRGQLSNTAPQVQFLPAPSD 1240
ASTSTQFTRGQLSNTAPQVQFLPAPSD
Sbjct: 181 ASTSTQFTRGQLSNTAPQVQFLPAPSD 207
>dbj|BAG12142.1| coat protein [Plantago asiatica mosaic virus]
Length = 207
Score = 377 bits (968), Expect = e-102
Identities = 186/207 (89%), Positives = 200/207 (96%)
Frame = +2
Query: 620 MALNKAPTADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFD 799
MALN+APT+DAL AMTF VSSPSVPTAEEL TI++GLTTLG+PAD LLSHALAVVNACFD
Sbjct: 1 MALNQAPTSDALNAMTFAVSSPSVPTAEELATITQGLTTLGVPADSLLSHALAVVNACFD 60
Query: 800 AGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKVIWNARLARNLPPAGFAR 979
AGSSAFVTLSGPSPTATISLAQ+AGV+KVTTTLRKFCR+YAK+IWNARL+RNLPPAGFAR
Sbjct: 61 AGSSAFVTLSGPSPTATISLAQIAGVVKVTTTLRKFCRFYAKIIWNARLSRNLPPAGFAR 120
Query: 980 ANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNL 1159
ANIKFEHRWAGFD FDGLLNPAALEP+GGL+RTPTPDEVTANETARSLNLFEARA+SSNL
Sbjct: 121 ANIKFEHRWAGFDSFDGLLNPAALEPIGGLTRTPTPDEVTANETARSLNLFEARASSSNL 180
Query: 1160 ASTSTQFTRGQLSNTAPQVQFLPAPSD 1240
ASTSTQFTRG LSNTAPQ QFLP+PSD
Sbjct: 181 ASTSTQFTRGHLSNTAPQAQFLPSPSD 207
>gb|AGW45385.1| coat protein [Plantago asiatica mosaic virus]
Length = 207
Score = 374 bits (960), Expect = e-101
Identities = 183/207 (88%), Positives = 201/207 (97%)
Frame = +2
Query: 620 MALNKAPTADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFD 799
MALN+AP+ DAL AMTF VSSPSVPTA EL+TI++GLTTLG+PA+ LLSHAL+VVNACFD
Sbjct: 1 MALNQAPSPDALDAMTFAVSSPSVPTAAELDTITRGLTTLGVPAEALLSHALSVVNACFD 60
Query: 800 AGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKVIWNARLARNLPPAGFAR 979
AGSSAFVTLSGPSPTATISLAQ+AGV+KVTTTLRKFCR+YAK IWNARL+RNLPPAGFAR
Sbjct: 61 AGSSAFVTLSGPSPTATISLAQIAGVVKVTTTLRKFCRFYAKTIWNARLSRNLPPAGFAR 120
Query: 980 ANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNL 1159
ANIKFEHRWAGFDFFDGLLNPAALEPLGGL+RTPTPDEVTANETARSLNLFEARA++SNL
Sbjct: 121 ANIKFEHRWAGFDFFDGLLNPAALEPLGGLTRTPTPDEVTANETARSLNLFEARASTSNL 180
Query: 1160 ASTSTQFTRGQLSNTAPQVQFLPAPSD 1240
ASTSTQFTRGQLS+TAPQ+QFLP+PSD
Sbjct: 181 ASTSTQFTRGQLSSTAPQIQFLPSPSD 207
>ref|NP_702992.1| coat protein [Tulip virus X] gi|23491558|dbj|BAC16789.1| coat protein
[Tulip virus X]
Length = 207
Score = 336 bits (861), Expect = 1e-89
Identities = 162/207 (78%), Positives = 187/207 (90%)
Frame = +2
Query: 620 MALNKAPTADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFD 799
MALN AP +ALAAMT +VSSP+VPT EL+TI+ GLTTLG+PAD L+SHALA+VNACFD
Sbjct: 1 MALNTAPNPEALAAMTLEVSSPAVPTPAELDTIAAGLTTLGVPADSLISHALALVNACFD 60
Query: 800 AGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKVIWNARLARNLPPAGFAR 979
AGSS F T+SGPSPT TI+LAQ+AGV+KV+TTLRKFCR+YAK+IWNARL+RN PPAGFAR
Sbjct: 61 AGSSQFTTISGPSPTPTITLAQLAGVVKVSTTLRKFCRFYAKLIWNARLSRNRPPAGFAR 120
Query: 980 ANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNL 1159
A +K +WAGFDFFDGLLNPAALEPLGGL+R PTPDE+TANETARSL LFE+RANS+NL
Sbjct: 121 AYVKTGQKWAGFDFFDGLLNPAALEPLGGLTREPTPDEITANETARSLGLFESRANSNNL 180
Query: 1160 ASTSTQFTRGQLSNTAPQVQFLPAPSD 1240
A+TSTQFTRGQLSNT+P VQFLP+P D
Sbjct: 181 ATTSTQFTRGQLSNTSPTVQFLPSPED 207
>gb|ACE62921.1| coat protein [Tulip virus X]
Length = 207
Score = 332 bits (852), Expect = 2e-88
Identities = 161/207 (77%), Positives = 186/207 (89%)
Frame = +2
Query: 620 MALNKAPTADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFD 799
MALN APT +ALAAMT VSSP+VPT ELETI+ GLTTLG+P D L+SHALA+VNACFD
Sbjct: 1 MALNTAPTPEALAAMTLAVSSPAVPTPLELETITAGLTTLGVPTDSLISHALALVNACFD 60
Query: 800 AGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKVIWNARLARNLPPAGFAR 979
AGSS F TLSGPSPT+TI+LAQ+AGV+KV+TTLRKFCR+YAK+IWNARL+RN PPAGFAR
Sbjct: 61 AGSSQFTTLSGPSPTSTITLAQIAGVVKVSTTLRKFCRFYAKLIWNARLSRNQPPAGFAR 120
Query: 980 ANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNL 1159
A +K +WAGFDFFDGLLNPAALEPLGGL+R PTPDE+TANETARSL LFE+RANS++L
Sbjct: 121 AYVKTGQKWAGFDFFDGLLNPAALEPLGGLTREPTPDEITANETARSLGLFESRANSNSL 180
Query: 1160 ASTSTQFTRGQLSNTAPQVQFLPAPSD 1240
A+T+TQFTRGQLSNT+P VQ+LP P D
Sbjct: 181 ATTATQFTRGQLSNTSPTVQYLPNPED 207
>gb|AAW30636.1| coat protein [Tulip virus X]
Length = 157
Score = 271 bits (693), Expect = 4e-70
Identities = 128/157 (81%), Positives = 146/157 (92%)
Frame = +2
Query: 770 ALAVVNACFDAGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKVIWNARLA 949
ALA+VNACFDAGSS F TLSGPSPT ++LAQ+AGV+KV+TTLRKFCR+YAK+IWNARL+
Sbjct: 1 ALALVNACFDAGSSQFTTLSGPSPTPAVTLAQIAGVVKVSTTLRKFCRFYAKLIWNARLS 60
Query: 950 RNLPPAGFARANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNL 1129
RNLPPAGFARA +K H+WAGFDFFDGLLNPAALEPLGGL+R PTPDE+TANETARSL L
Sbjct: 61 RNLPPAGFARAYVKTGHKWAGFDFFDGLLNPAALEPLGGLTREPTPDEITANETARSLGL 120
Query: 1130 FEARANSSNLASTSTQFTRGQLSNTAPQVQFLPAPSD 1240
FE+RANS+NLA+TSTQFTRGQLSNT+P VQFLP+P D
Sbjct: 121 FESRANSNNLATTSTQFTRGQLSNTSPTVQFLPSPED 157
>ref|NP_042699.1| coat protein [Cassava common mosaic virus] gi|773409|gb|AAC54779.1|
coat protein [Cassava common mosaic virus]
gi|1587827|prf||2207297E ORF 5
Length = 229
Score = 224 bits (571), Expect = 6e-56
Identities = 111/201 (55%), Positives = 148/201 (73%)
Frame = +2
Query: 623 ALNKAPTADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFDA 802
AL+ APT + L+ + + +S V +A+ L I+ +L +P L+ HAL +VN CFD+
Sbjct: 24 ALSTAPTDEELSRLDLKPASNLVASADALSAIAADWASLKVPTAQLMRHALDLVNFCFDS 83
Query: 803 GSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKVIWNARLARNLPPAGFARA 982
GSS + T+ G SPT TI A +AG ++ TTLR+FCRYYAK+IWNAR+ N+PPAG+A A
Sbjct: 84 GSSKYTTVEGSSPTPTIPRAALAGAVRKHTTLRQFCRYYAKIIWNARVKANIPPAGYANA 143
Query: 983 NIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNLA 1162
+IK E +AGFDFFDG++N AALEP GGL R PTP E+ A ETARSLNLFEA++ +NLA
Sbjct: 144 HIKPEQAFAGFDFFDGVMNVAALEPSGGLVREPTPQEIIAAETARSLNLFEAQSKGNNLA 203
Query: 1163 STSTQFTRGQLSNTAPQVQFL 1225
+ +TQ TRG+LS++ PQVQFL
Sbjct: 204 TNATQVTRGRLSSSEPQVQFL 224
>ref|YP_224088.1| coat protein [Hydrangea ringspot virus] gi|56792009|gb|AAW30452.1|
coat protein [Hydrangea ringspot virus]
Length = 225
Score = 208 bits (529), Expect = 5e-51
Identities = 109/208 (52%), Positives = 141/208 (67%), Gaps = 1/208 (0%)
Frame = +2
Query: 614 STMALNKAPTA-DALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNA 790
ST + AP + + L ++F V+S VP+ EL I+ TTLG+PA HALA+VN
Sbjct: 17 STPSAAFAPLSQEVLETLSFPVTSNLVPSPTELAAIADAWTTLGVPAAETTKHALALVNF 76
Query: 791 CFDAGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKVIWNARLARNLPPAG 970
CFD+GSSA +G SPT TI L+ +AG + +RKFCRY+A+ IWNARL N PPA
Sbjct: 77 CFDSGSSATTRFTGASPTPTIPLSALAGAVLELVPIRKFCRYFAQYIWNARLTANAPPAS 136
Query: 971 FARANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANS 1150
+ N ++AGFDFFDG+LN A+L+P GL R PT E AN TA+SL+LFEA
Sbjct: 137 WEAWNFPENEKFAGFDFFDGVLNTASLKPPQGLVRKPTEAERVANATAKSLHLFEAATQR 196
Query: 1151 SNLASTSTQFTRGQLSNTAPQVQFLPAP 1234
SNLAST+TQFTRG+L++T+P +QFLPAP
Sbjct: 197 SNLASTATQFTRGRLTDTSPTIQFLPAP 224
>gb|ADE10206.1| coat protein [Hydrangea ringspot virus]
Length = 225
Score = 206 bits (524), Expect = 2e-50
Identities = 108/208 (51%), Positives = 140/208 (67%), Gaps = 1/208 (0%)
Frame = +2
Query: 614 STMALNKAPTA-DALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNA 790
ST + AP + + L ++F V+S VP+ EL I+ TTLG+PA HALA+VN
Sbjct: 17 STPSAAFAPLSQEVLETLSFPVTSNLVPSPTELAAIADAWTTLGVPAAETTKHALALVNF 76
Query: 791 CFDAGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKVIWNARLARNLPPAG 970
CFD+GSSA +G SPT I L+ +AG + +RKFCRY+A+ IWNARL N PPA
Sbjct: 77 CFDSGSSATTRFTGASPTPAIPLSALAGAVLELVPIRKFCRYFAQYIWNARLTANAPPAS 136
Query: 971 FARANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANS 1150
+ N ++AGFDFFDG+LN A+L+P GL R PT E AN TA+SL+LFEA
Sbjct: 137 WEAWNFPENEKFAGFDFFDGVLNTASLKPPQGLVRKPTEAERVANATAKSLHLFEAATQR 196
Query: 1151 SNLASTSTQFTRGQLSNTAPQVQFLPAP 1234
SNLAST+TQFTRG+L++T+P +QFLPAP
Sbjct: 197 SNLASTATQFTRGRLTDTSPTIQFLPAP 224
>ref|YP_004849318.1| coat protein [Tamus red mosaic virus] gi|345548101|gb|AEO12144.1|
coat protein [Tamus red mosaic virus]
Length = 221
Score = 184 bits (468), Expect = 5e-44
Identities = 91/201 (45%), Positives = 129/201 (64%)
Frame = +2
Query: 632 KAPTADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFDAGSS 811
KAPT D L MTF V+S +P+ EE + IS+ LGI D L +A+ + C+ +GSS
Sbjct: 20 KAPTLDRLKLMTFDVNSTLLPSTEEFKLISEDWAKLGISGDSLTENAMKLATFCYHSGSS 79
Query: 812 AFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKVIWNARLARNLPPAGFARANIK 991
+ G S +SL+++AGV+ + T+LRKFCRY+A +IWN + +PPA + + K
Sbjct: 80 TTTEMRGESSKPGVSLSRLAGVVNMHTSLRKFCRYFAPLIWNIHVESKIPPAAWQSKDFK 139
Query: 992 FEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNLASTS 1171
++A FDFFDG+ N +++P GGL R PT E AN TAR+L LFEA A + +AS S
Sbjct: 140 EGEKFAAFDFFDGVENVGSIKPPGGLIRKPTDKERIANATARALKLFEAAAQQNRMASNS 199
Query: 1172 TQFTRGQLSNTAPQVQFLPAP 1234
+T+G+ S+TAPQ+QFLP P
Sbjct: 200 VHYTQGRYSDTAPQIQFLPDP 220
>ref|YP_054406.1| coat protein [Zygocactus virus X] gi|38146351|gb|AAR11546.1| coat
protein [Zygocactus virus X]
Length = 226
Score = 176 bits (445), Expect = 2e-41
Identities = 94/198 (47%), Positives = 124/198 (62%)
Frame = +2
Query: 641 TADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFDAGSSAFV 820
TA LAA+T V+S +P+ EEL +S LT LG + + AL VVN CFD GSS
Sbjct: 28 TAAQLAALTLGVTSSLLPSPEELVQLSNALTALGASSSNVSQVALEVVNYCFDNGSSPET 87
Query: 821 TLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKVIWNARLARNLPPAGFARANIKFEH 1000
G S I L++VA I TTLR+FCRY+AK+IWN R++RNLPPA + K E
Sbjct: 88 VFKGNSNLLQIPLSKVAQAITQVTTLRQFCRYFAKLIWNYRVSRNLPPAAWEAWAYKPEQ 147
Query: 1001 RWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQF 1180
++A FDFFDG+LN AAL+P GL R P E AN+T R+++LFE+ A S + +TS
Sbjct: 148 KFAAFDFFDGVLNEAALQPTDGLVRLPNEAERLANQTNRNVHLFESNAQKSRVLTTSALV 207
Query: 1181 TRGQLSNTAPQVQFLPAP 1234
T+G + P++QFLP P
Sbjct: 208 TKGLQGSETPRIQFLPGP 225
>gb|AFU63340.1| coat protein [Alternanthera mosaic virus]
Length = 207
Score = 175 bits (443), Expect = 4e-41
Identities = 90/199 (45%), Positives = 130/199 (65%), Gaps = 1/199 (0%)
Frame = +2
Query: 641 TADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFDAGSSAFV 820
T + + A T +S +P+ E+L TI+ L +PA + AL +VN C+D GSSA+
Sbjct: 9 TQEQMNAFTPHATSNLLPSPEQLTTIASLLVAAKVPAASTTTIALELVNFCYDNGSSAYT 68
Query: 821 TLSGPSPTATISLAQVAGVIKVT-TTLRKFCRYYAKVIWNARLARNLPPAGFARANIKFE 997
+ GPS A +SL+QVA ++K + T+LRKFCR++A +IWN R + +PPA + K
Sbjct: 69 AVVGPSSLAEVSLSQVANIVKASGTSLRKFCRFFAPIIWNLRTDK-MPPANWEANGFKPT 127
Query: 998 HRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQ 1177
++A FDFFDG+ NPAA++P GGL RTP+ E AN T + +NLF+A A +NLAS S
Sbjct: 128 EKFAAFDFFDGVENPAAMQPPGGLVRTPSQAERIANATNKQVNLFQAAAQDNNLASNSAF 187
Query: 1178 FTRGQLSNTAPQVQFLPAP 1234
T+GQLS+ +P +Q+LP P
Sbjct: 188 ITKGQLSSNSPNIQYLPPP 206
>gb|AFB81318.1| coat protein [Alternanthera mosaic virus]
Length = 207
Score = 173 bits (438), Expect = 2e-40
Identities = 89/199 (44%), Positives = 129/199 (64%), Gaps = 1/199 (0%)
Frame = +2
Query: 641 TADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFDAGSSAFV 820
T + + A T +S +P+ E+L TI+ L +PA + AL +VN C+D GSS +
Sbjct: 9 TQEQMNAFTPHATSNLLPSPEQLTTIASLLVAAKVPAASTTTIALELVNFCYDNGSSTYT 68
Query: 821 TLSGPSPTATISLAQVAGVIKVT-TTLRKFCRYYAKVIWNARLARNLPPAGFARANIKFE 997
+ GPS A +SL+QVA ++K + T+LRKFCR++A +IWN R + +PPA + K
Sbjct: 69 AVVGPSSLAEVSLSQVANIVKASGTSLRKFCRFFAPIIWNLRTDK-MPPANWEANGFKPT 127
Query: 998 HRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQ 1177
++A FDFFDG+ NPAA++P GGL RTP+ E AN T + +NLF+A A +NLAS S
Sbjct: 128 EKFAAFDFFDGVENPAAMQPPGGLVRTPSQAERIANATNKQVNLFQAAAQDNNLASNSAF 187
Query: 1178 FTRGQLSNTAPQVQFLPAP 1234
T+GQLS+ +P +Q+LP P
Sbjct: 188 ITKGQLSSNSPTIQYLPPP 206
>gb|AAG52893.1| coat protein [Papaya mosaic virus]
Length = 215
Score = 172 bits (436), Expect = 3e-40
Identities = 87/212 (41%), Positives = 139/212 (65%), Gaps = 5/212 (2%)
Frame = +2
Query: 614 STMALNKAP----TADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAV 781
S+M+ +K P T++ ++ + +S +P+ E+L+++S + +PA + + A+ +
Sbjct: 4 SSMSSSKTPFPPITSEQMSTLKVDPTSNLLPSPEQLKSVSALMVAAKVPAASVTTVAMEL 63
Query: 782 VNACFDAGSSAFVTLSGPSPTATISLAQVAGVIKVT-TTLRKFCRYYAKVIWNARLARNL 958
VN C+D GSSA+ T+ GPS +SLAQ+A ++K + T+LRKFCRY+A +IWN R +
Sbjct: 64 VNFCYDNGSSAYTTVVGPSSVPEVSLAQLASIVKASGTSLRKFCRYFAPIIWNIRTDKT- 122
Query: 959 PPAGFARANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEA 1138
PPA + A K ++A FDFFDG+ NPAA++P GL R+PT +E AN T + ++LF+A
Sbjct: 123 PPANWEAAGYKPNAKFAAFDFFDGVENPAAMQPPTGLIRSPTQEERIANATNKQVHLFQA 182
Query: 1139 RANSSNLASTSTQFTRGQLSNTAPQVQFLPAP 1234
A +N AS S T+GQ+S ++P +QF+P P
Sbjct: 183 AAQDNNFASNSAFITKGQISGSSPTIQFVPPP 214
>gb|AFB81325.1| coat protein [Alternanthera mosaic virus]
Length = 207
Score = 172 bits (435), Expect = 4e-40
Identities = 88/199 (44%), Positives = 129/199 (64%), Gaps = 1/199 (0%)
Frame = +2
Query: 641 TADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFDAGSSAFV 820
T + + A T +S +P+ E+L TI+ L T +PA + AL +VN C+D GSSA+
Sbjct: 9 TQEQIDAFTPHTTSNLLPSPEQLTTIASLLVTAKVPAASTTTIALELVNFCYDNGSSAYT 68
Query: 821 TLSGPSPTATISLAQVAGVIKVT-TTLRKFCRYYAKVIWNARLARNLPPAGFARANIKFE 997
+ GPS + +SL+QVA ++K + T+LRKFCR++A +IWN R + +PPA + K
Sbjct: 69 VVVGPSSISEVSLSQVANIVKASGTSLRKFCRFFAPIIWNLRTDK-IPPANWEANGFKPT 127
Query: 998 HRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQ 1177
++A FDFFDG+ NPAA++P GGL R P+ E AN T + +NLF+A A +N AS S
Sbjct: 128 EKFAAFDFFDGVENPAAMQPPGGLVRAPSQAERIANATNKQVNLFQAAAQDNNFASNSAF 187
Query: 1178 FTRGQLSNTAPQVQFLPAP 1234
T+GQLS+ +P +Q+LP P
Sbjct: 188 ITKGQLSSNSPTIQYLPPP 206
>ref|YP_459948.1| coat protein [Alternanthera mosaic virus] gi|62082371|gb|AAX62023.1|
coat protein [Alternanthera mosaic virus]
gi|62546293|gb|AAX86018.1| coat protein [Alternanthera
mosaic virus]
Length = 207
Score = 171 bits (434), Expect = 5e-40
Identities = 88/199 (44%), Positives = 128/199 (64%), Gaps = 1/199 (0%)
Frame = +2
Query: 641 TADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFDAGSSAFV 820
T + + A T +S +P++E+L TI+ L +PA + AL +VN C+D GSS +
Sbjct: 9 TQEQMNAFTPHATSNLLPSSEQLTTIASLLVAAKVPAASTTTIALELVNFCYDNGSSTYT 68
Query: 821 TLSGPSPTATISLAQVAGVIKVT-TTLRKFCRYYAKVIWNARLARNLPPAGFARANIKFE 997
+ GPS A +SL+QVA ++K + T+LRKFCR++A +IWN R + PPA + K
Sbjct: 69 VVVGPSSLAEVSLSQVANIVKASGTSLRKFCRFFAPIIWNLRTDKT-PPANWEANGFKPT 127
Query: 998 HRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQ 1177
++A FDFFDG+ NPAA++P GGL RTP+ E AN T + +NLF+A A +N AS S
Sbjct: 128 EKFAAFDFFDGVENPAAMQPPGGLVRTPSQAERIANATNKQVNLFQAAAQDNNFASNSAF 187
Query: 1178 FTRGQLSNTAPQVQFLPAP 1234
T+GQLS+ +P +Q+LP P
Sbjct: 188 ITKGQLSSNSPTIQYLPPP 206
>gb|AAG52896.1| coat protein [Papaya mosaic virus]
Length = 215
Score = 171 bits (434), Expect = 5e-40
Identities = 87/212 (41%), Positives = 138/212 (65%), Gaps = 5/212 (2%)
Frame = +2
Query: 614 STMALNKAP----TADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAV 781
S+M+ + P T++ ++ + +S +P+ E+L+++S + +PA + + A+ +
Sbjct: 4 SSMSSSNTPFPPITSEQMSTLKVDPTSNLLPSPEQLKSVSALMVAAKVPAASVTTVAMEL 63
Query: 782 VNACFDAGSSAFVTLSGPSPTATISLAQVAGVIKVT-TTLRKFCRYYAKVIWNARLARNL 958
VN C+D GSSA+ T+ GPS +SLAQ+A ++K + T+LRKFCRY+A +IWN R +
Sbjct: 64 VNFCYDNGSSAYTTVVGPSSVPEVSLAQLASIVKASGTSLRKFCRYFAPIIWNIRTDKT- 122
Query: 959 PPAGFARANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEA 1138
PPA + A K ++A FDFFDG+ NPAA++P GL R+PT +E AN T + ++LF+A
Sbjct: 123 PPANWEAAGYKPNAKFAAFDFFDGVENPAAMQPPTGLIRSPTQEERIANATNKQVHLFQA 182
Query: 1139 RANSSNLASTSTQFTRGQLSNTAPQVQFLPAP 1234
A +N AS S T+GQ+S ++P +QFLP P
Sbjct: 183 AAQDNNFASNSAFITKGQISGSSPTIQFLPPP 214