BLASTX nr result
ID: Rehmannia24_contig00030428
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rehmannia24_contig00030428 (373 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004229413.1| PREDICTED: transcription regulatory protein ... 57 3e-06 gb|EOY05607.1| Chromatin remodeling complex subunit isoform 2 [T... 56 4e-06 gb|EOY05606.1| Chromatin remodeling complex subunit isoform 1 [T... 56 4e-06 ref|NP_187252.2| SNF2/Brahma-type chromatin-remodeling protein C... 56 6e-06 gb|AAF23228.1|AC013454_15 putative transcriptional regulator [Ar... 56 6e-06 >ref|XP_004229413.1| PREDICTED: transcription regulatory protein SNF2-like [Solanum lycopersicum] Length = 1106 Score = 56.6 bits (135), Expect = 3e-06 Identities = 29/53 (54%), Positives = 33/53 (62%), Gaps = 4/53 (7%) Frame = -3 Query: 149 EPENPLDSAKTLICALNFLSRNLPLPQHVYDAVSSI----CQDASTDSGDDGP 3 E + L+ KTLICALNFLSRNLP+P V+DAVSSI D GD P Sbjct: 32 ESQEQLEKTKTLICALNFLSRNLPIPPDVFDAVSSIYNSDANDVDVGDGDASP 84 >gb|EOY05607.1| Chromatin remodeling complex subunit isoform 2 [Theobroma cacao] Length = 1083 Score = 56.2 bits (134), Expect = 4e-06 Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 7/60 (11%) Frame = -3 Query: 164 VEADPEPENP----LDSAKTLICALNFLSRNLPLPQHVYDAVSSIC---QDASTDSGDDG 6 +E + E P L AK+LICALNF+SRNLPLP ++D VSSIC Q+ +++ DDG Sbjct: 5 LEHQQQKEEPCLDNLQKAKSLICALNFVSRNLPLPPDLFDVVSSICYDEQEGLSEATDDG 64 >gb|EOY05606.1| Chromatin remodeling complex subunit isoform 1 [Theobroma cacao] Length = 1127 Score = 56.2 bits (134), Expect = 4e-06 Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 7/60 (11%) Frame = -3 Query: 164 VEADPEPENP----LDSAKTLICALNFLSRNLPLPQHVYDAVSSIC---QDASTDSGDDG 6 +E + E P L AK+LICALNF+SRNLPLP ++D VSSIC Q+ +++ DDG Sbjct: 5 LEHQQQKEEPCLDNLQKAKSLICALNFVSRNLPLPPDLFDVVSSICYDEQEGLSEATDDG 64 >ref|NP_187252.2| SNF2/Brahma-type chromatin-remodeling protein CHR12 [Arabidopsis thaliana] gi|332640808|gb|AEE74329.1| SNF2/Brahma-type chromatin-remodeling protein CHR12 [Arabidopsis thaliana] Length = 1102 Score = 55.8 bits (133), Expect = 6e-06 Identities = 25/45 (55%), Positives = 36/45 (80%) Frame = -3 Query: 143 ENPLDSAKTLICALNFLSRNLPLPQHVYDAVSSICQDASTDSGDD 9 E+P+++ K+LICALN++SR+LPLP H++ AVSSI AS+ S D Sbjct: 16 EDPVETTKSLICALNYISRDLPLPPHLFTAVSSIYHGASSSSLSD 60 >gb|AAF23228.1|AC013454_15 putative transcriptional regulator [Arabidopsis thaliana] Length = 1132 Score = 55.8 bits (133), Expect = 6e-06 Identities = 25/45 (55%), Positives = 36/45 (80%) Frame = -3 Query: 143 ENPLDSAKTLICALNFLSRNLPLPQHVYDAVSSICQDASTDSGDD 9 E+P+++ K+LICALN++SR+LPLP H++ AVSSI AS+ S D Sbjct: 16 EDPVETTKSLICALNYISRDLPLPPHLFTAVSSIYHGASSSSLSD 60