BLASTX nr result
ID: Rehmannia24_contig00030305
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00030305
(389 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS60243.1| hypothetical protein M569_14560, partial [Genlise... 130 1e-28
ref|XP_002308446.1| hypothetical protein POPTR_0006s22220g [Popu... 130 2e-28
gb|EOY08416.1| Arginine/serine-rich zinc knuckle-containing prot... 128 7e-28
ref|XP_002530164.1| Splicing factor, arginine/serine-rich, putat... 124 1e-26
emb|CBI30363.3| unnamed protein product [Vitis vinifera] 124 1e-26
emb|CAN79169.1| hypothetical protein VITISV_012165 [Vitis vinifera] 124 2e-26
ref|XP_006481552.1| PREDICTED: serine/arginine-rich splicing fac... 117 2e-24
gb|EXC01941.1| Cold-inducible RNA-binding protein [Morus notabilis] 115 6e-24
ref|XP_006430105.1| hypothetical protein CICLE_v10011213mg [Citr... 113 2e-23
gb|ESW17808.1| hypothetical protein PHAVU_007G270200g [Phaseolus... 112 7e-23
ref|XP_004305637.1| PREDICTED: uncharacterized protein LOC101293... 108 7e-22
ref|XP_006575296.1| PREDICTED: serine/arginine-rich splicing fac... 107 2e-21
ref|XP_006575295.1| PREDICTED: serine/arginine-rich splicing fac... 107 2e-21
ref|XP_006588853.1| PREDICTED: serine/arginine-rich splicing fac... 105 6e-21
ref|XP_006854723.1| hypothetical protein AMTR_s00030p00238130 [A... 104 1e-20
ref|XP_004952662.1| PREDICTED: serine/arginine-rich splicing fac... 99 4e-19
ref|NP_001047043.1| Os02g0536400 [Oryza sativa Japonica Group] g... 96 6e-18
gb|EEC73343.1| hypothetical protein OsI_07547 [Oryza sativa Indi... 96 6e-18
ref|XP_006648699.1| PREDICTED: serine/arginine-rich splicing fac... 87 2e-15
ref|XP_003572587.1| PREDICTED: uncharacterized protein LOC100843... 87 3e-15
>gb|EPS60243.1| hypothetical protein M569_14560, partial [Genlisea aurea]
Length = 204
Score = 130 bits (328), Expect = 1e-28
Identities = 59/92 (64%), Positives = 73/92 (79%)
Frame = +3
Query: 81 MSLHIGNLSSRIRRDDLERVFRRFGRCTIQVKDKYGFVVYDYPASAEKALKTLRGTRICG 260
MSL+IG LS DD+ERVF +FG+CTI++KD+YGFVVY P++AE+AL+TLRGT ICG
Sbjct: 1 MSLYIGQLSPEANADDIERVFGKFGKCTIKMKDRYGFVVYGNPSNAERALRTLRGTSICG 60
Query: 261 EAITLSWSTRQPRALQRFGRGGKSYEPPRRRY 356
ITLSWS +QP L+ GRGGK Y+PP RRY
Sbjct: 61 HVITLSWSNQQPHGLKGVGRGGKLYDPPHRRY 92
>ref|XP_002308446.1| hypothetical protein POPTR_0006s22220g [Populus trichocarpa]
gi|222854422|gb|EEE91969.1| hypothetical protein
POPTR_0006s22220g [Populus trichocarpa]
Length = 693
Score = 130 bits (326), Expect = 2e-28
Identities = 59/90 (65%), Positives = 73/90 (81%)
Frame = +3
Query: 81 MSLHIGNLSSRIRRDDLERVFRRFGRCTIQVKDKYGFVVYDYPASAEKALKTLRGTRICG 260
MSLHIGNLSS IRRD+LERVF+RFGRC +++KD YGFVVY++P +AEKAL+ L ICG
Sbjct: 1 MSLHIGNLSSHIRRDELERVFQRFGRCNVRMKDGYGFVVYEFPPNAEKALRALHKRNICG 60
Query: 261 EAITLSWSTRQPRALQRFGRGGKSYEPPRR 350
+ +TLSWS +QPR L+RF R +SYEP R
Sbjct: 61 KPLTLSWSNKQPRPLKRFARTDRSYEPQHR 90
>gb|EOY08416.1| Arginine/serine-rich zinc knuckle-containing protein 33, putative
isoform 1 [Theobroma cacao] gi|508716520|gb|EOY08417.1|
Arginine/serine-rich zinc knuckle-containing protein 33,
putative isoform 1 [Theobroma cacao]
Length = 674
Score = 128 bits (322), Expect = 7e-28
Identities = 61/93 (65%), Positives = 76/93 (81%), Gaps = 2/93 (2%)
Frame = +3
Query: 81 MSLHIGNLSSRIRRDDLERVFRRFGRCTIQVKDKYGFVVYDYPASAEKALKTLRGTRICG 260
MSL+IG+LSSR RRD+LERVFRRFGRC I++KD YGF+VYDYP +AEKAL+ L+G ICG
Sbjct: 1 MSLYIGHLSSRTRRDELERVFRRFGRCNIRLKDGYGFIVYDYPPNAEKALRALQGRNICG 60
Query: 261 EAITLSWSTRQPRALQRFGRGGKSY--EPPRRR 353
E +TL+WS +QPR L++F R +SY EP R R
Sbjct: 61 EPLTLTWSNKQPRPLKKFARADQSYDQEPLRVR 93
>ref|XP_002530164.1| Splicing factor, arginine/serine-rich, putative [Ricinus communis]
gi|223530325|gb|EEF32219.1| Splicing factor,
arginine/serine-rich, putative [Ricinus communis]
Length = 676
Score = 124 bits (312), Expect = 1e-26
Identities = 58/92 (63%), Positives = 73/92 (79%), Gaps = 1/92 (1%)
Frame = +3
Query: 81 MSLHIGNLSSRIRRDDLERVFRRFGRCTIQVKDKYGFVVYDYPASAEKALKTLRGTRICG 260
MSL+IGNLSSRIRRD+LERVF+RFG+C +++KD YGFVVY++P +AEKAL+ L ICG
Sbjct: 1 MSLYIGNLSSRIRRDELERVFQRFGQCDVRLKDGYGFVVYEFPPNAEKALRALEKKHICG 60
Query: 261 EAITLSWSTRQPRALQRFGR-GGKSYEPPRRR 353
EA+ L+WS +QPR R R GG+SYEP R
Sbjct: 61 EALNLTWSNKQPRQFNRLARAGGRSYEPQHSR 92
>emb|CBI30363.3| unnamed protein product [Vitis vinifera]
Length = 651
Score = 124 bits (311), Expect = 1e-26
Identities = 59/91 (64%), Positives = 72/91 (79%)
Frame = +3
Query: 81 MSLHIGNLSSRIRRDDLERVFRRFGRCTIQVKDKYGFVVYDYPASAEKALKTLRGTRICG 260
MSL++GNLSS IRRDDLERVF RFGRC IQ+KD YGF VYD+PA+A+KA++ +RG ICG
Sbjct: 1 MSLYLGNLSSHIRRDDLERVFWRFGRCNIQLKDGYGFAVYDFPANADKAMRAMRGKNICG 60
Query: 261 EAITLSWSTRQPRALQRFGRGGKSYEPPRRR 353
E I+L+WS +QPR Q RG +SYE R R
Sbjct: 61 ERISLTWSNKQPRGFQ---RGARSYELQRGR 88
>emb|CAN79169.1| hypothetical protein VITISV_012165 [Vitis vinifera]
Length = 685
Score = 124 bits (310), Expect = 2e-26
Identities = 59/91 (64%), Positives = 72/91 (79%)
Frame = +3
Query: 81 MSLHIGNLSSRIRRDDLERVFRRFGRCTIQVKDKYGFVVYDYPASAEKALKTLRGTRICG 260
MSL++GNLSS IRRDDLERVF RFGRC IQ+KD YGF VYD+PA+A+KA++ +RG ICG
Sbjct: 1 MSLYLGNLSSHIRRDDLERVFWRFGRCNIQLKDGYGFAVYDFPANADKAMRAMRGKNICG 60
Query: 261 EAITLSWSTRQPRALQRFGRGGKSYEPPRRR 353
E I+L+WS +QPR Q RG +SYE R R
Sbjct: 61 ERISLTWSNKQPRGXQ---RGARSYELQRGR 88
>ref|XP_006481552.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform X1
[Citrus sinensis]
Length = 685
Score = 117 bits (293), Expect = 2e-24
Identities = 59/104 (56%), Positives = 75/104 (72%), Gaps = 1/104 (0%)
Frame = +3
Query: 81 MSLHIGNLSSRIRRDDLERVFRRFGRCTIQVKDKYGFVVYDYPASAEKALKTLRGTRICG 260
MSL+IGNLSS RR +LERVF+RFG C ++VKD YGFVVY+ +AEKAL TL+G ICG
Sbjct: 1 MSLYIGNLSSHTRRGELERVFQRFGDCNVRVKDGYGFVVYESAPNAEKALITLQGRNICG 60
Query: 261 EAITLSWSTRQPRALQRFGRGGKSYEPPRRRYPPVKEN-ADRRL 389
+ +TL WS +QPR +RF + +SYEP R +E+ DRRL
Sbjct: 61 QPLTLMWSNKQPRPYKRFSKAARSYEPLYGRSSNRREDYTDRRL 104
>gb|EXC01941.1| Cold-inducible RNA-binding protein [Morus notabilis]
Length = 667
Score = 115 bits (288), Expect = 6e-24
Identities = 55/102 (53%), Positives = 71/102 (69%)
Frame = +3
Query: 81 MSLHIGNLSSRIRRDDLERVFRRFGRCTIQVKDKYGFVVYDYPASAEKALKTLRGTRICG 260
MSL+IGNLS+R R+D+LERVF+R+G+C +++KD YGFVVYD+P AE AL LRG I G
Sbjct: 1 MSLYIGNLSARTRKDELERVFQRYGQCDVRLKDGYGFVVYDFPPDAESALSALRGRNIRG 60
Query: 261 EAITLSWSTRQPRALQRFGRGGKSYEPPRRRYPPVKENADRR 386
+T+SWS +QPR QR R +SYE R K + D R
Sbjct: 61 RQLTISWSNKQPRTFQRHARDARSYESHGRDSSSRKNSNDWR 102
>ref|XP_006430105.1| hypothetical protein CICLE_v10011213mg [Citrus clementina]
gi|557532162|gb|ESR43345.1| hypothetical protein
CICLE_v10011213mg [Citrus clementina]
Length = 685
Score = 113 bits (283), Expect = 2e-23
Identities = 58/104 (55%), Positives = 74/104 (71%), Gaps = 1/104 (0%)
Frame = +3
Query: 81 MSLHIGNLSSRIRRDDLERVFRRFGRCTIQVKDKYGFVVYDYPASAEKALKTLRGTRICG 260
MSL+IGNLSS R +LERVF+RFG C ++VKD YGFVVY+ +AEKAL TL+G ICG
Sbjct: 1 MSLYIGNLSSHTCRGELERVFQRFGYCNVRVKDGYGFVVYESAPNAEKALITLQGRDICG 60
Query: 261 EAITLSWSTRQPRALQRFGRGGKSYEPPRRRYPPVKEN-ADRRL 389
+ +TL WS +QPR +RF + +SYEP R +E+ DRRL
Sbjct: 61 QPLTLMWSNKQPRPYKRFSKAARSYEPLYGRSSNRREDYTDRRL 104
>gb|ESW17808.1| hypothetical protein PHAVU_007G270200g [Phaseolus vulgaris]
Length = 601
Score = 112 bits (279), Expect = 7e-23
Identities = 53/85 (62%), Positives = 66/85 (77%), Gaps = 2/85 (2%)
Frame = +3
Query: 81 MSLHIGNLSSRIRRDDLERVFRRFGRCTIQVK-DKYGFVVYDYPASAEKALKTLRGTRIC 257
MSL+IGNLS RRD+LERVFRRFG+C +Q+K D YGFVV+D+P AEKAL+ L+G IC
Sbjct: 1 MSLYIGNLSEHSRRDELERVFRRFGQCNVQLKRDGYGFVVFDFPPDAEKALRALKGRNIC 60
Query: 258 GEAITLSWSTRQPRA-LQRFGRGGK 329
GE +TL+WS +QP RF RGG+
Sbjct: 61 GEELTLTWSNKQPNTHFSRFSRGGR 85
>ref|XP_004305637.1| PREDICTED: uncharacterized protein LOC101293998 [Fragaria vesca
subsp. vesca]
Length = 619
Score = 108 bits (270), Expect = 7e-22
Identities = 55/103 (53%), Positives = 68/103 (66%)
Frame = +3
Query: 81 MSLHIGNLSSRIRRDDLERVFRRFGRCTIQVKDKYGFVVYDYPASAEKALKTLRGTRICG 260
MSL IGNLS+R R DDL R+FR+FG CT + KD YGFVVYD P AEKAL+ L+G ICG
Sbjct: 1 MSLFIGNLSARTRGDDLRRLFRKFGHCTFKRKDHYGFVVYDIPQDAEKALRALQGRHICG 60
Query: 261 EAITLSWSTRQPRALQRFGRGGKSYEPPRRRYPPVKENADRRL 389
E + L+WS +QP Q R +SYE R ++ A RR+
Sbjct: 61 EPLVLTWSKKQPIPFQGHQRVVRSYELQGRHSARGRDFAGRRM 103
>ref|XP_006575296.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform X2
[Glycine max]
Length = 642
Score = 107 bits (266), Expect = 2e-21
Identities = 55/97 (56%), Positives = 67/97 (69%), Gaps = 4/97 (4%)
Frame = +3
Query: 81 MSLHIGNLSSRIRRDDLERVFRRFGRCTIQVK-DKYGFVVYDYPASAEKALKTLRGTRIC 257
MSL+IGNLS +RDDLERVFRRFG C +Q+K D YGFVV+D+P AEKAL+ L+G IC
Sbjct: 1 MSLYIGNLSEHSQRDDLERVFRRFGHCNVQLKRDGYGFVVFDFPPDAEKALRALKGRNIC 60
Query: 258 GEAITLSWSTRQPRA-LQRFGRGGKS--YEPPRRRYP 359
GE +TL+WS +QP R GG+ YE R P
Sbjct: 61 GEPLTLTWSNKQPSTHFSRIPSGGRRNVYELQHARNP 97
>ref|XP_006575295.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform X1
[Glycine max]
Length = 669
Score = 107 bits (266), Expect = 2e-21
Identities = 55/97 (56%), Positives = 67/97 (69%), Gaps = 4/97 (4%)
Frame = +3
Query: 81 MSLHIGNLSSRIRRDDLERVFRRFGRCTIQVK-DKYGFVVYDYPASAEKALKTLRGTRIC 257
MSL+IGNLS +RDDLERVFRRFG C +Q+K D YGFVV+D+P AEKAL+ L+G IC
Sbjct: 1 MSLYIGNLSEHSQRDDLERVFRRFGHCNVQLKRDGYGFVVFDFPPDAEKALRALKGRNIC 60
Query: 258 GEAITLSWSTRQPRA-LQRFGRGGKS--YEPPRRRYP 359
GE +TL+WS +QP R GG+ YE R P
Sbjct: 61 GEPLTLTWSNKQPSTHFSRIPSGGRRNVYELQHARNP 97
>ref|XP_006588853.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform X1
[Glycine max] gi|571482098|ref|XP_006588854.1|
PREDICTED: serine/arginine-rich splicing factor 4-like
isoform X2 [Glycine max]
Length = 674
Score = 105 bits (262), Expect = 6e-21
Identities = 48/73 (65%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
Frame = +3
Query: 81 MSLHIGNLSSRIRRDDLERVFRRFGRCTIQVK-DKYGFVVYDYPASAEKALKTLRGTRIC 257
MSL+IGNLS RRDDLERVFRRFG C +Q+K + YGFVV+D+P AEKAL+ L+G IC
Sbjct: 1 MSLYIGNLSEHSRRDDLERVFRRFGHCNVQLKRNGYGFVVFDFPLDAEKALRALKGRNIC 60
Query: 258 GEAITLSWSTRQP 296
GE++TL+WS++QP
Sbjct: 61 GESLTLTWSSKQP 73
>ref|XP_006854723.1| hypothetical protein AMTR_s00030p00238130 [Amborella trichopoda]
gi|548858409|gb|ERN16190.1| hypothetical protein
AMTR_s00030p00238130 [Amborella trichopoda]
Length = 706
Score = 104 bits (260), Expect = 1e-20
Identities = 52/101 (51%), Positives = 70/101 (69%)
Frame = +3
Query: 81 MSLHIGNLSSRIRRDDLERVFRRFGRCTIQVKDKYGFVVYDYPASAEKALKTLRGTRICG 260
MSL +GNL RIR +LERVF++FGRC IQ+KD YGFV+YD +AE+AL++LR T+ICG
Sbjct: 1 MSLFLGNLPPRIRHSELERVFQKFGRCNIQLKDGYGFVLYDIVGNAERALQSLRDTKICG 60
Query: 261 EAITLSWSTRQPRALQRFGRGGKSYEPPRRRYPPVKENADR 383
E I+L+W+ ++ + L RF R + P R KEN R
Sbjct: 61 EEISLTWANKKHQPLPRFMRNNRFSRPYRWSSFNRKENITR 101
>ref|XP_004952662.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Setaria
italica]
Length = 676
Score = 99.4 bits (246), Expect = 4e-19
Identities = 47/91 (51%), Positives = 60/91 (65%)
Frame = +3
Query: 81 MSLHIGNLSSRIRRDDLERVFRRFGRCTIQVKDKYGFVVYDYPASAEKALKTLRGTRICG 260
MSLHIG LS +R LE++F+RFGRCT+ +KD YGF VYD A +AL+ L G +CG
Sbjct: 1 MSLHIGRLSQDVRHSYLEQLFQRFGRCTVNLKDGYGFAVYDSDGDATRALRALHGKYVCG 60
Query: 261 EAITLSWSTRQPRALQRFGRGGKSYEPPRRR 353
E IT++WS +QPR Q F R + E R R
Sbjct: 61 ERITVNWSKQQPRCSQGFRRSSRFVESFRGR 91
>ref|NP_001047043.1| Os02g0536400 [Oryza sativa Japonica Group]
gi|50251883|dbj|BAD27811.1| unknown protein [Oryza
sativa Japonica Group] gi|113536574|dbj|BAF08957.1|
Os02g0536400 [Oryza sativa Japonica Group]
gi|215713534|dbj|BAG94671.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|222623001|gb|EEE57133.1| hypothetical protein
OsJ_07030 [Oryza sativa Japonica Group]
Length = 656
Score = 95.5 bits (236), Expect = 6e-18
Identities = 45/97 (46%), Positives = 67/97 (69%)
Frame = +3
Query: 81 MSLHIGNLSSRIRRDDLERVFRRFGRCTIQVKDKYGFVVYDYPASAEKALKTLRGTRICG 260
MSLHIG LSS +R+ LE +F+RFG CT+++KD YGF V+D A +A++ L+G +CG
Sbjct: 1 MSLHIGRLSSHVRQRYLEHLFQRFGNCTVRLKDGYGFAVFDSNDDAARAMRALQGKFVCG 60
Query: 261 EAITLSWSTRQPRALQRFGRGGKSYEPPRRRYPPVKE 371
E IT++WS +QPR + F R ++ E +R P V++
Sbjct: 61 ERITVNWSKQQPRFSKDF-RSSRNIESSHQRAPRVRD 96
>gb|EEC73343.1| hypothetical protein OsI_07547 [Oryza sativa Indica Group]
Length = 651
Score = 95.5 bits (236), Expect = 6e-18
Identities = 45/97 (46%), Positives = 67/97 (69%)
Frame = +3
Query: 81 MSLHIGNLSSRIRRDDLERVFRRFGRCTIQVKDKYGFVVYDYPASAEKALKTLRGTRICG 260
MSLHIG LSS +R+ LE +F+RFG CT+++KD YGF V+D A +A++ L+G +CG
Sbjct: 1 MSLHIGRLSSHVRQRYLEHLFQRFGNCTVRLKDGYGFAVFDSNDDAARAMRALQGKFVCG 60
Query: 261 EAITLSWSTRQPRALQRFGRGGKSYEPPRRRYPPVKE 371
E IT++WS +QPR + F R ++ E +R P V++
Sbjct: 61 ERITVNWSKQQPRFSKDF-RSSRNVESSHQRAPRVRD 96
>ref|XP_006648699.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Oryza
brachyantha]
Length = 595
Score = 87.0 bits (214), Expect = 2e-15
Identities = 39/78 (50%), Positives = 56/78 (71%)
Frame = +3
Query: 81 MSLHIGNLSSRIRRDDLERVFRRFGRCTIQVKDKYGFVVYDYPASAEKALKTLRGTRICG 260
MSLHIG LS + + LE +F+RFG CT+++KD YGFVV+D A +A++ L+G +CG
Sbjct: 1 MSLHIGRLSPDVHQVYLEHLFQRFGNCTVKLKDGYGFVVFDSNGDAARAMQALQGKYVCG 60
Query: 261 EAITLSWSTRQPRALQRF 314
E IT++WS +QPR + F
Sbjct: 61 ERITVNWSKQQPRFSKDF 78
>ref|XP_003572587.1| PREDICTED: uncharacterized protein LOC100843176 [Brachypodium
distachyon]
Length = 628
Score = 86.7 bits (213), Expect = 3e-15
Identities = 38/73 (52%), Positives = 53/73 (72%)
Frame = +3
Query: 81 MSLHIGNLSSRIRRDDLERVFRRFGRCTIQVKDKYGFVVYDYPASAEKALKTLRGTRICG 260
MSLHIG LSS +R+ LE +F+ FGRCT+++K+ YGF V+D A +AL+ L G +CG
Sbjct: 1 MSLHIGRLSSHVRQGYLEHLFQAFGRCTVKLKNGYGFAVFDSSDDAARALRELHGKPVCG 60
Query: 261 EAITLSWSTRQPR 299
E IT++WS QP+
Sbjct: 61 ERITVNWSKHQPK 73