BLASTX nr result
ID: Rehmannia24_contig00030212
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00030212
(428 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABN08587.1| Polynucleotidyl transferase, Ribonuclease H fold ... 86 1e-17
gb|ADB85355.1| putative retrotransposon protein [Phyllostachys e... 83 2e-17
gb|EOY00082.1| DNA/RNA polymerases superfamily protein [Theobrom... 79 3e-17
ref|XP_002268718.2| PREDICTED: HIPL1 protein-like [Vitis vinifera] 82 3e-17
gb|ADB85337.1| putative retrotransposon protein [Phyllostachys e... 79 6e-17
emb|CAN61139.1| hypothetical protein VITISV_009489 [Vitis vinifera] 82 7e-17
emb|CAA73042.1| polyprotein [Ananas comosus] 80 1e-16
gb|EOY19685.1| DNA/RNA polymerases superfamily protein, putative... 77 1e-16
gb|EOY26510.1| DNA/RNA polymerases superfamily protein [Theobrom... 77 2e-16
gb|EOY14138.1| Uncharacterized protein TCM_033423 [Theobroma cacao] 77 2e-16
gb|ABM55240.1| retrotransposon protein [Beta vulgaris] 75 2e-16
gb|EOY00215.1| DNA/RNA polymerases superfamily protein [Theobrom... 78 3e-16
gb|EOY14055.1| Retrotransposon protein, putative [Theobroma cacao] 75 4e-16
gb|ABA95071.1| retrotransposon protein, putative, Ty3-gypsy subc... 78 5e-16
ref|XP_004515018.1| PREDICTED: uncharacterized protein LOC101498... 77 5e-16
ref|XP_004510585.1| PREDICTED: uncharacterized protein LOC101494... 77 2e-15
gb|EOX94287.1| Uncharacterized protein TCM_003876 [Theobroma cacao] 73 2e-15
gb|EOX94089.1| Uncharacterized protein TCM_003206 [Theobroma cacao] 73 3e-15
gb|ADB85273.1| putative retrotransposon protein [Phyllostachys e... 73 4e-15
gb|AAX96450.1| retrotransposon protein, putative, Ty3-gypsy sub-... 73 5e-15
>gb|ABN08587.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
Length = 482
Score = 85.9 bits (211), Expect(2) = 1e-17
Identities = 51/128 (39%), Positives = 73/128 (57%), Gaps = 7/128 (5%)
Frame = -3
Query: 426 LSRKA-YVARLMIREWKSLEE------LSYWNPKKVGTQLLCANLSVKPELLTEILLSQQ 268
LSRK +++ LM+RE++ LE+ + W+P+ V +L + E L I +Q+
Sbjct: 177 LSRKTLHMSALMVREFELLEQFRDLSLVCEWSPQSVKLGML----KIDSEFLKSIKEAQK 232
Query: 267 KDHKFGEFKNKMIQRGKSDFKLGDDSILRFRNRICIPHDEDLKRKILSEAHHSKYTIHPG 88
D KF + Q SDFK+ D +LRFR RICIP D ++K+ IL E+H S +IHPG
Sbjct: 233 VDVKFVDLLVASNQTEDSDFKVDDHGVLRFRGRICIPDDAEMKKMILEESHRSSLSIHPG 292
Query: 87 GKKMYQYL 64
KMY L
Sbjct: 293 ATKMYHNL 300
Score = 29.3 bits (64), Expect(2) = 1e-17
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 56 FWWVNMKNQVAEFVAKCL 3
FWW +K VA+FV CL
Sbjct: 304 FWWSGLKRDVAQFVYSCL 321
>gb|ADB85355.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1112
Score = 83.2 bits (204), Expect(2) = 2e-17
Identities = 48/120 (40%), Positives = 69/120 (57%), Gaps = 1/120 (0%)
Frame = -3
Query: 426 LSRKAYVARLMIREWKSLEELSYWNPK-KVGTQLLCANLSVKPELLTEILLSQQKDHKFG 250
LSRK+Y + ++E S + + K +V ++ ANL V+ L +I +Q KD++F
Sbjct: 626 LSRKSYCNAVEVKEVCSELQEEFQKLKLEVVSEGFVANLEVQSTLEKQIREAQPKDYEFS 685
Query: 249 EFKNKMIQRGKSDFKLGDDSILRFRNRICIPHDEDLKRKILSEAHHSKYTIHPGGKKMYQ 70
K KM + DF + D IL RIC+P + L++ IL EAH SKY+IHPG KMYQ
Sbjct: 686 NIKKKMAEGKFKDFTVDDQDILWINGRICVPDIDGLRQLILKEAHDSKYSIHPGSTKMYQ 745
Score = 31.6 bits (70), Expect(2) = 2e-17
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -1
Query: 56 FWWVNMKNQVAEFVAKC 6
FWW N+K VAEF+A C
Sbjct: 751 FWWPNLKRVVAEFIALC 767
>gb|EOY00082.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1515
Score = 79.3 bits (194), Expect(2) = 3e-17
Identities = 38/100 (38%), Positives = 59/100 (59%), Gaps = 7/100 (7%)
Frame = -3
Query: 348 KKVGTQL-------LCANLSVKPELLTEILLSQQKDHKFGEFKNKMIQRGKSDFKLGDDS 190
K +G QL L AN V+P LL +I Q+ D + + K+ G S+F+ G+D+
Sbjct: 1008 KSLGVQLRNGEDGSLLANFIVRPSLLNQIKDIQRSDDELRKEIQKLTDGGVSEFRFGEDN 1067
Query: 189 ILRFRNRICIPHDEDLKRKILSEAHHSKYTIHPGGKKMYQ 70
+L F++R+C+P L++ I+ EAH S Y +HPG KMY+
Sbjct: 1068 VLMFKDRVCVPEGNQLRQAIMEEAHSSAYALHPGSTKMYR 1107
Score = 34.7 bits (78), Expect(2) = 3e-17
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -1
Query: 59 HFWWVNMKNQVAEFVAKCL 3
++WW MK VAEF+AKCL
Sbjct: 1112 NYWWPGMKRDVAEFIAKCL 1130
>ref|XP_002268718.2| PREDICTED: HIPL1 protein-like [Vitis vinifera]
Length = 937
Score = 81.6 bits (200), Expect(2) = 3e-17
Identities = 40/88 (45%), Positives = 54/88 (61%)
Frame = -3
Query: 327 LCANLSVKPELLTEILLSQQKDHKFGEFKNKMIQRGKSDFKLGDDSILRFRNRICIPHDE 148
L AN V+P L+ I Q+ D + ++ + K DF L DD ILRF R+C+P+D
Sbjct: 64 LVANFRVQPNLVGRIKALQKNDLNLVQLMEEVKKGSKPDFVLSDDGILRFMTRLCVPNDG 123
Query: 147 DLKRKILSEAHHSKYTIHPGGKKMYQYL 64
DL+R+ L EAH S+ IHPGG KMY+ L
Sbjct: 124 DLRREFLEEAHCSRLAIHPGGTKMYKDL 151
Score = 32.3 bits (72), Expect(2) = 3e-17
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -1
Query: 59 HFWWVNMKNQVAEFVAKCL 3
++WW MK +A+FVA+CL
Sbjct: 154 NYWWSGMKRDIAQFVARCL 172
>gb|ADB85337.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1053
Score = 79.0 bits (193), Expect(2) = 6e-17
Identities = 51/125 (40%), Positives = 73/125 (58%), Gaps = 4/125 (3%)
Frame = -3
Query: 426 LSRKAYVARLMIREWKS--LEELSYWNPKKVGTQLLCAN-LSVKPELLTEILLSQQKDHK 256
LSRKAY +++++ + EEL + N + V C N L V+P L ++I Q +D
Sbjct: 532 LSRKAYCNTILVQKNQPELYEELKHLNLEIVNQG--CVNALEVQPTLQSQIREKQLEDED 589
Query: 255 FGEFKNKMIQRGKSD-FKLGDDSILRFRNRICIPHDEDLKRKILSEAHHSKYTIHPGGKK 79
E K M +RGK+ F + + F NRIC+P+ ++LK+ IL EAH S Y+IHPG K
Sbjct: 590 IKEIKKNM-RRGKAPGFSEDEQGTVWFGNRICVPNQQELKQSILKEAHESPYSIHPGSTK 648
Query: 78 MYQYL 64
MYQ L
Sbjct: 649 MYQDL 653
Score = 33.9 bits (76), Expect(2) = 6e-17
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = -1
Query: 56 FWWVNMKNQVAEFVAKC 6
+WWV+MK ++AEFVA C
Sbjct: 657 YWWVSMKREIAEFVAHC 673
>emb|CAN61139.1| hypothetical protein VITISV_009489 [Vitis vinifera]
Length = 984
Score = 81.6 bits (200), Expect(2) = 7e-17
Identities = 40/88 (45%), Positives = 56/88 (63%)
Frame = -3
Query: 327 LCANLSVKPELLTEILLSQQKDHKFGEFKNKMIQRGKSDFKLGDDSILRFRNRICIPHDE 148
L AN V+P+L+ I Q+ D + ++ + K DF L DD ILRF R+C+P+DE
Sbjct: 504 LIANFRVQPDLVGRIKALQKNDLNLVQLMEEVKKGSKLDFVLSDDGILRFGTRLCVPNDE 563
Query: 147 DLKRKILSEAHHSKYTIHPGGKKMYQYL 64
DL+R++L EAH SK+ IHP KMY+ L
Sbjct: 564 DLRRELLEEAHCSKFAIHPERTKMYKDL 591
Score = 30.8 bits (68), Expect(2) = 7e-17
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -1
Query: 59 HFWWVNMKNQVAEFVAKCL 3
++WW MK +A+FVA+CL
Sbjct: 594 NYWWSGMKCDIAQFVAQCL 612
>emb|CAA73042.1| polyprotein [Ananas comosus]
Length = 871
Score = 80.5 bits (197), Expect(2) = 1e-16
Identities = 40/91 (43%), Positives = 51/91 (56%)
Frame = -3
Query: 336 TQLLCANLSVKPELLTEILLSQQKDHKFGEFKNKMIQRGKSDFKLGDDSILRFRNRICIP 157
T + L V+P LL I Q D + + K KM+ DF L D ++RFR RIC+P
Sbjct: 459 TPMRLMTLVVQPTLLDRIKEKQASDVELQKIKGKMVDGCTGDFTLDGDGLMRFRGRICVP 518
Query: 156 HDEDLKRKILSEAHHSKYTIHPGGKKMYQYL 64
D +K IL EAH + Y IHPGG KMY+ L
Sbjct: 519 ADSGIKEDILQEAHRAPYAIHPGGTKMYKDL 549
Score = 31.6 bits (70), Expect(2) = 1e-16
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -1
Query: 56 FWWVNMKNQVAEFVAKCL 3
+WW +K V EFVAKCL
Sbjct: 553 YWWPGIKKDVGEFVAKCL 570
>gb|EOY19685.1| DNA/RNA polymerases superfamily protein, putative [Theobroma cacao]
Length = 1347
Score = 76.6 bits (187), Expect(2) = 1e-16
Identities = 37/100 (37%), Positives = 59/100 (59%), Gaps = 7/100 (7%)
Frame = -3
Query: 348 KKVGTQL-------LCANLSVKPELLTEILLSQQKDHKFGEFKNKMIQRGKSDFKLGDDS 190
K +G QL + AN V+P LL +I Q+ D + + K+ G S+F+ G+D+
Sbjct: 862 KSLGVQLRNGEDGSVLANFIVRPSLLNQIKDIQRSDDELRKEIQKLTDGGVSEFRFGEDN 921
Query: 189 ILRFRNRICIPHDEDLKRKILSEAHHSKYTIHPGGKKMYQ 70
+L FR+R+C+P L++ I+ EAH S Y ++PG KMY+
Sbjct: 922 VLMFRDRVCVPEGNQLRQTIMEEAHSSAYALNPGSTKMYR 961
Score = 35.0 bits (79), Expect(2) = 1e-16
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -1
Query: 59 HFWWVNMKNQVAEFVAKCL 3
++WW MK VAEFVAKCL
Sbjct: 966 NYWWPGMKRDVAEFVAKCL 984
>gb|EOY26510.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1290
Score = 77.0 bits (188), Expect(2) = 2e-16
Identities = 42/100 (42%), Positives = 56/100 (56%), Gaps = 7/100 (7%)
Frame = -3
Query: 348 KKVGTQL-------LCANLSVKPELLTEILLSQQKDHKFGEFKNKMIQRGKSDFKLGDDS 190
K +G QL L A+ V+P LL +I Q+ D + K+ S+F+L DD
Sbjct: 810 KSLGIQLNNGEDGTLLASFVVRPSLLNQIRELQKFDDWLKQEVQKLQDGEASEFRLSDDG 869
Query: 189 ILRFRNRICIPHDEDLKRKILSEAHHSKYTIHPGGKKMYQ 70
L R+RIC+P D+ L+R IL EAH S Y +HPG KMYQ
Sbjct: 870 TLMLRDRICVPKDDQLRRAILEEAHSSAYALHPGSTKMYQ 909
Score = 34.3 bits (77), Expect(2) = 2e-16
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -1
Query: 56 FWWVNMKNQVAEFVAKCL 3
+WW MK +AEFVAKCL
Sbjct: 915 YWWPGMKRDIAEFVAKCL 932
>gb|EOY14138.1| Uncharacterized protein TCM_033423 [Theobroma cacao]
Length = 809
Score = 77.0 bits (188), Expect(2) = 2e-16
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 7/100 (7%)
Frame = -3
Query: 348 KKVGTQL-------LCANLSVKPELLTEILLSQQKDHKFGEFKNKMIQRGKSDFKLGDDS 190
K +G QL L A+ V+P LL +I Q+ D + K+ S+F+L DD
Sbjct: 526 KSLGIQLNNGEDGTLLASFVVRPSLLNQIRELQKSDDWLKQEVQKLQDGEASEFRLNDDG 585
Query: 189 ILRFRNRICIPHDEDLKRKILSEAHHSKYTIHPGGKKMYQ 70
I R+RIC+P D+ L+R IL EAH S Y +HPG KMY+
Sbjct: 586 IFMLRDRICVPKDDQLRRAILEEAHSSAYALHPGSTKMYR 625
Score = 34.3 bits (77), Expect(2) = 2e-16
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -1
Query: 56 FWWVNMKNQVAEFVAKCL 3
+WW MK +AEFVAKCL
Sbjct: 631 YWWPGMKRDIAEFVAKCL 648
>gb|ABM55240.1| retrotransposon protein [Beta vulgaris]
Length = 1501
Score = 75.5 bits (184), Expect(2) = 2e-16
Identities = 42/112 (37%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Frame = -3
Query: 396 MIREWKSLEELSYWNPKKVGTQLLCANLSVKPELLTEILLSQQKDHKFGEFKNKMIQRGK 217
+ R+ K L L NP + +L +NLS+ + EI+ Q D + K KM Q +
Sbjct: 985 LCRDMKRLN-LEILNPGESEARL--SNLSLGVSIFDEIIEGQVGDEHLDKIKEKMKQGKE 1041
Query: 216 SDFKLGDDSILRFRNRICIPHD-EDLKRKILSEAHHSKYTIHPGGKKMYQYL 64
DFK+ +D LRF+ R C+P DLKR+++ E H++ Y++HPGG K+Y+ L
Sbjct: 1042 IDFKIHEDGSLRFKGRWCVPQKCNDLKRRLMDEGHNTPYSVHPGGDKLYKDL 1093
Score = 35.4 bits (80), Expect(2) = 2e-16
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = -1
Query: 56 FWWVNMKNQVAEFVAKCL 3
+WW NMK +VAE+V+KCL
Sbjct: 1097 YWWPNMKREVAEYVSKCL 1114
>gb|EOY00215.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1537
Score = 77.8 bits (190), Expect(2) = 3e-16
Identities = 41/100 (41%), Positives = 57/100 (57%), Gaps = 7/100 (7%)
Frame = -3
Query: 348 KKVGTQL-------LCANLSVKPELLTEILLSQQKDHKFGEFKNKMIQRGKSDFKLGDDS 190
K +G QL L A+ V+P LL +I Q+ D + K+ S+F+L DD
Sbjct: 1021 KSLGIQLNNGEDGTLLASFVVRPSLLNQIRELQKSDDWLKQEVQKLQDGKASEFRLSDDG 1080
Query: 189 ILRFRNRICIPHDEDLKRKILSEAHHSKYTIHPGGKKMYQ 70
L R+RIC+P D+ L+R IL EAH+S Y +HPG KMY+
Sbjct: 1081 TLMLRDRICVPKDDQLRRAILEEAHYSAYALHPGSTKMYR 1120
Score = 32.7 bits (73), Expect(2) = 3e-16
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -1
Query: 56 FWWVNMKNQVAEFVAKCL 3
+WW M+ +AEFVAKCL
Sbjct: 1126 YWWPGMERDIAEFVAKCL 1143
>gb|EOY14055.1| Retrotransposon protein, putative [Theobroma cacao]
Length = 831
Score = 75.5 bits (184), Expect(2) = 4e-16
Identities = 35/86 (40%), Positives = 54/86 (62%)
Frame = -3
Query: 327 LCANLSVKPELLTEILLSQQKDHKFGEFKNKMIQRGKSDFKLGDDSILRFRNRICIPHDE 148
L A+ V+P LL +I Q+ D + + K+I G S+F+L +D+IL FR+R+C+P
Sbjct: 436 LLASFIVRPSLLNQIKDIQRSDDELRKEIQKLIDEGVSEFRLREDNILMFRDRVCVPKGN 495
Query: 147 DLKRKILSEAHHSKYTIHPGGKKMYQ 70
L++ I+ EAH S Y +HP KMY+
Sbjct: 496 QLRQAIMEEAHSSAYALHPESTKMYR 521
Score = 34.7 bits (78), Expect(2) = 4e-16
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -1
Query: 59 HFWWVNMKNQVAEFVAKCL 3
++WW MK +AEFVAKCL
Sbjct: 526 NYWWPGMKRDIAEFVAKCL 544
>gb|ABA95071.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1122
Score = 77.8 bits (190), Expect(2) = 5e-16
Identities = 47/127 (37%), Positives = 69/127 (54%), Gaps = 3/127 (2%)
Frame = -3
Query: 426 LSRKAYVARLMIREWKSLEELSYWNPKKVGTQLLCANLS---VKPELLTEILLSQQKDHK 256
LSRK Y A ++ W + + L K T + NL+ V+P L T+I +QQ+D
Sbjct: 710 LSRKTYCATALV--WPTQDNLCREIEKLKLTMVPTGNLASLTVQPTLETQIREAQQEDEG 767
Query: 255 FGEFKNKMIQRGKSDFKLGDDSILRFRNRICIPHDEDLKRKILSEAHHSKYTIHPGGKKM 76
E K K+ ++ F + D + F +RIC+P ++LK IL EAH S Y+IHPG KM
Sbjct: 768 MKEMKGKIRKKRLKGFTIDDQDTVWFGSRICVPARKELKDLILREAHESAYSIHPGSTKM 827
Query: 75 YQYLNTF 55
YQ + +
Sbjct: 828 YQDIKEY 834
Score = 32.0 bits (71), Expect(2) = 5e-16
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -1
Query: 59 HFWWVNMKNQVAEFVAKC 6
+FWW MK VAE+VA C
Sbjct: 834 YFWWAGMKRDVAEYVALC 851
>ref|XP_004515018.1| PREDICTED: uncharacterized protein LOC101498380 [Cicer arietinum]
Length = 524
Score = 77.4 bits (189), Expect(2) = 5e-16
Identities = 45/123 (36%), Positives = 73/123 (59%), Gaps = 2/123 (1%)
Frame = -3
Query: 426 LSRKAYVARLMIREWKSLEELSYWNPKKVG-TQLLCANLSVKPELLTEILLSQQKDHKFG 250
L+ A V R +++E++ + E ++G ++L A++ + P ++ +I +Q +D
Sbjct: 273 LAHIAEVKRQIVKEFQEIVESGI--QFELGHSRLFLAHVQILPTIVDDIKKAQSQDSHLV 330
Query: 249 EFKNKMIQRGK-SDFKLGDDSILRFRNRICIPHDEDLKRKILSEAHHSKYTIHPGGKKMY 73
N +Q GK SDF + D +LR ++R+C+P+ L+RKIL EAHHS Y IHP KMY
Sbjct: 331 NMVNN-VQNGKISDFSVDSDGVLRLKSRLCVPNVGGLRRKILDEAHHSSYIIHPVSNKMY 389
Query: 72 QYL 64
Q L
Sbjct: 390 QDL 392
Score = 32.3 bits (72), Expect(2) = 5e-16
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -1
Query: 56 FWWVNMKNQVAEFVAKCL 3
+WW MK VA+FV+KCL
Sbjct: 396 YWWERMKRDVADFVSKCL 413
>ref|XP_004510585.1| PREDICTED: uncharacterized protein LOC101494113 [Cicer arietinum]
Length = 1414
Score = 76.6 bits (187), Expect(2) = 2e-15
Identities = 46/119 (38%), Positives = 72/119 (60%), Gaps = 2/119 (1%)
Frame = -3
Query: 414 AYVARLMIREWKSLEELSYWNPKKVG-TQLLCANLSVKPELLTEILLSQQKDHKFGEFKN 238
A V R +I+E++ + E ++G ++L A++ ++P ++ +I +Q +D N
Sbjct: 1179 AEVKRPIIKEFQDVVESGI--QLELGHSRLFLAHVQIRPTIVDDIKEAQSQDPYLVNMVN 1236
Query: 237 KMIQRGKSDFKLGD-DSILRFRNRICIPHDEDLKRKILSEAHHSKYTIHPGGKKMYQYL 64
+Q GK + L D D +LR + R+C+P+ L+RKIL EAHHS YTIHPG KMYQ L
Sbjct: 1237 N-VQNGKISYFLVDFDGVLRLKARLCVPNVCGLRRKILEEAHHSSYTIHPGSNKMYQDL 1294
Score = 31.2 bits (69), Expect(2) = 2e-15
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -1
Query: 56 FWWVNMKNQVAEFVAKCL 3
+WW MK VA+FV++CL
Sbjct: 1298 YWWEGMKRDVADFVSRCL 1315
>gb|EOX94287.1| Uncharacterized protein TCM_003876 [Theobroma cacao]
Length = 179
Score = 72.8 bits (177), Expect(2) = 2e-15
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 7/100 (7%)
Frame = -3
Query: 348 KKVGTQL-------LCANLSVKPELLTEILLSQQKDHKFGEFKNKMIQRGKSDFKLGDDS 190
K +G QL L AN V+P LL +I Q+ D + + K+ G S+F+ G+D+
Sbjct: 2 KSLGVQLRNGEDGSLLANFIVRPSLLNQIKDIQRSDDELRKEIQKLTDGGVSEFRFGEDN 61
Query: 189 ILRFRNRICIPHDEDLKRKILSEAHHSKYTIHPGGKKMYQ 70
IL F++R+C+ L++ I+ EAH S Y +H G KMY+
Sbjct: 62 ILMFKDRVCVTEGNQLRQAIMEEAHSSAYALHLGSTKMYR 101
Score = 35.0 bits (79), Expect(2) = 2e-15
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -1
Query: 59 HFWWVNMKNQVAEFVAKCL 3
++WW MK VAEFVAKCL
Sbjct: 106 NYWWPGMKRDVAEFVAKCL 124
>gb|EOX94089.1| Uncharacterized protein TCM_003206 [Theobroma cacao]
Length = 694
Score = 73.2 bits (178), Expect(2) = 3e-15
Identities = 33/86 (38%), Positives = 53/86 (61%)
Frame = -3
Query: 327 LCANLSVKPELLTEILLSQQKDHKFGEFKNKMIQRGKSDFKLGDDSILRFRNRICIPHDE 148
L N V+P LL +I Q+ D + E + K+ G S+F+ G+D++L F++R+C+P
Sbjct: 446 LLGNFIVRPSLLNQIKDIQRSDDELKEIQ-KLTDGGVSEFRFGEDNVLMFKDRVCVPEGN 504
Query: 147 DLKRKILSEAHHSKYTIHPGGKKMYQ 70
L++ I+ EAH S Y +H G KMY+
Sbjct: 505 QLRQAIMEEAHSSAYALHSGSTKMYR 530
Score = 33.9 bits (76), Expect(2) = 3e-15
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -1
Query: 59 HFWWVNMKNQVAEFVAKCL 3
++WW MK VAEFVAKC+
Sbjct: 535 NYWWPGMKRDVAEFVAKCV 553
>gb|ADB85273.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 897
Score = 73.2 bits (178), Expect(2) = 4e-15
Identities = 44/123 (35%), Positives = 67/123 (54%), Gaps = 2/123 (1%)
Frame = -3
Query: 426 LSRKAYVARLMIREW--KSLEELSYWNPKKVGTQLLCANLSVKPELLTEILLSQQKDHKF 253
LSRK Y + L+++E K EE+ N + V + A L V+P + +I +Q D
Sbjct: 365 LSRKGYCSTLLVQENQPKLYEEMRRLNLEIVNQDCVYA-LEVEPTVQRQIRENQATDKDL 423
Query: 252 GEFKNKMIQRGKSDFKLGDDSILRFRNRICIPHDEDLKRKILSEAHHSKYTIHPGGKKMY 73
E K+ + + F ++ IL F NR+C+P + +K+ +L E H S Y+IHPG KMY
Sbjct: 424 QEIKDNLKREKAPGFSEDEEGILWFGNRLCVPDCQAIKQLLLKETHESHYSIHPGSTKMY 483
Query: 72 QYL 64
Q L
Sbjct: 484 QEL 486
Score = 33.5 bits (75), Expect(2) = 4e-15
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 56 FWWVNMKNQVAEFVAKC 6
+WWV MK ++AEFVA C
Sbjct: 490 YWWVGMKREIAEFVAHC 506
>gb|AAX96450.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|77549773|gb|ABA92570.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1723
Score = 72.8 bits (177), Expect(2) = 5e-15
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 2/123 (1%)
Frame = -3
Query: 426 LSRKAYVARLMIREW--KSLEELSYWNPKKVGTQLLCANLSVKPELLTEILLSQQKDHKF 253
LSRK+Y L I + +E + N V + A L +P L+ ++ +Q D +
Sbjct: 1194 LSRKSYCTALCIESMCEELRQEFEHLNVGIVEHGFVAA-LEARPTLVDQVRAAQVNDSEI 1252
Query: 252 GEFKNKMIQRGKSDFKLGDDSILRFRNRICIPHDEDLKRKILSEAHHSKYTIHPGGKKMY 73
E K M DF + + R+C+P D++LK IL+EAHH++Y+IHPG KMY
Sbjct: 1253 AELKKNMRVGKARDFHEDEHGTIWLGERLCVPDDKELKDLILTEAHHTQYSIHPGSTKMY 1312
Query: 72 QYL 64
Q L
Sbjct: 1313 QDL 1315
Score = 33.5 bits (75), Expect(2) = 5e-15
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = -1
Query: 56 FWWVNMKNQVAEFVAKC 6
FWWV+M+ ++AEFVA C
Sbjct: 1319 FWWVSMRREIAEFVALC 1335