BLASTX nr result
ID: Rehmannia24_contig00030194
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00030194
(483 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAF01759.1| putative non-LTR retroelement reverse transcript... 161 1e-37
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta... 161 1e-37
pir||S65817 RNA-directed DNA polymerase (EC 2.7.7.49) (clone B3)... 150 2e-34
gb|AAB48348.1| reverse transcriptase, partial [Arabidopsis thali... 150 2e-34
gb|EMJ28511.1| hypothetical protein PRUPE_ppa016553mg [Prunus pe... 149 5e-34
ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein A... 148 8e-34
gb|AAM01179.2|AC113336_31 Putative retroelement [Oryza sativa Ja... 147 2e-33
gb|ABB46931.2| retrotransposon protein, putative, unclassified [... 147 2e-33
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-... 145 4e-33
gb|EEC83100.1| hypothetical protein OsI_28249 [Oryza sativa Indi... 145 4e-33
gb|EMJ00800.1| hypothetical protein PRUPE_ppa023095mg, partial [... 144 9e-33
gb|EEE69906.1| hypothetical protein OsJ_29747 [Oryza sativa Japo... 144 1e-32
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid... 144 2e-32
pir||S65819 RNA-directed DNA polymerase (EC 2.7.7.49) (clone N2)... 143 2e-32
ref|XP_004295858.1| PREDICTED: uncharacterized protein LOC101314... 143 2e-32
gb|AAB48344.1| reverse transcriptase, partial [Arabidopsis thali... 143 2e-32
gb|AAB48347.1| reverse transcriptase, partial [Arabidopsis thali... 143 2e-32
pir||S65818 RNA-directed DNA polymerase (EC 2.7.7.49) (clone N7)... 143 2e-32
gb|EEE52364.1| hypothetical protein OsJ_34428 [Oryza sativa Japo... 143 3e-32
gb|EEC84753.1| hypothetical protein OsI_31756 [Oryza sativa Indi... 143 3e-32
>dbj|BAF01759.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 400
Score = 161 bits (407), Expect = 1e-37
Identities = 80/160 (50%), Positives = 107/160 (66%)
Frame = +1
Query: 4 SFFTSGKILKKMNNALVTLIPKCPNPSYISQFRPISLCNVSYKIISKILANRLKPCLPDC 183
+F ++G +++N + LIPK P +++FRPISLCNVSYK+ISK+L++RLK LP+
Sbjct: 54 NFHSTGFFDERLNETNICLIPKTERPRKMAEFRPISLCNVSYKVISKVLSSRLKRLLPEL 113
Query: 184 VCLNQSAFLSDRFILDNVVVAHEAFHFLNRHRSGNKFYMAIKLDMMKAYDRVEWGGLRVV 363
+ QSAF+++R I DN+++A E FH L + + K YMAIK DM KAYDRVEW LR +
Sbjct: 114 ISETQSAFVAERLITDNILIAQENFHALRTNPACKKKYMAIKTDMSKAYDRVEWSFLRAL 173
Query: 364 MLKMGFAHIFVDWIXXXXXXXXXXFNLNGKSKGLVIPSRG 483
MLKMGFA +VDWI LNG KG + PSRG
Sbjct: 174 MLKMGFAQKWVDWIIFCISSVSYKILLNGSPKGFIKPSRG 213
>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1225
Score = 161 bits (407), Expect = 1e-37
Identities = 80/160 (50%), Positives = 107/160 (66%)
Frame = +1
Query: 4 SFFTSGKILKKMNNALVTLIPKCPNPSYISQFRPISLCNVSYKIISKILANRLKPCLPDC 183
+F ++G +++N + LIPK P +++FRPISLCNVSYK+ISK+L++RLK LP+
Sbjct: 420 NFHSTGFFDERLNETNICLIPKTERPRKMAEFRPISLCNVSYKVISKVLSSRLKRLLPEL 479
Query: 184 VCLNQSAFLSDRFILDNVVVAHEAFHFLNRHRSGNKFYMAIKLDMMKAYDRVEWGGLRVV 363
+ QSAF+++R I DN+++A E FH L + + K YMAIK DM KAYDRVEW LR +
Sbjct: 480 ISETQSAFVAERLITDNILIAQENFHALRTNPACKKKYMAIKTDMSKAYDRVEWSFLRAL 539
Query: 364 MLKMGFAHIFVDWIXXXXXXXXXXFNLNGKSKGLVIPSRG 483
MLKMGFA +VDWI LNG KG + PSRG
Sbjct: 540 MLKMGFAQKWVDWIIFCISSVSYKILLNGSPKGFIKPSRG 579
>pir||S65817 RNA-directed DNA polymerase (EC 2.7.7.49) (clone B3) - Arabidopsis
thaliana retrotransposon Ta25 (fragment)
Length = 184
Score = 150 bits (378), Expect = 2e-34
Identities = 77/160 (48%), Positives = 103/160 (64%)
Frame = +1
Query: 4 SFFTSGKILKKMNNALVTLIPKCPNPSYISQFRPISLCNVSYKIISKILANRLKPCLPDC 183
+F +S +++N + LIPK P +++FRPISLCNVSYK+ISK+L++RLK LPD
Sbjct: 23 NFHSSASFDERLNETNICLIPKIDRPRRMAEFRPISLCNVSYKVISKVLSSRLKKILPDL 82
Query: 184 VCLNQSAFLSDRFILDNVVVAHEAFHFLNRHRSGNKFYMAIKLDMMKAYDRVEWGGLRVV 363
+ QSAF++ R I DN++VA E FH L + + K +MAIK DM KAY RVEW LR +
Sbjct: 83 ISETQSAFVAGRLITDNILVAQENFHALRTNPACRKKFMAIKTDMSKAYGRVEWSFLRAL 142
Query: 364 MLKMGFAHIFVDWIXXXXXXXXXXFNLNGKSKGLVIPSRG 483
MLKMGFA +VD I LNG +G + P+RG
Sbjct: 143 MLKMGFAQKWVDLIMFCVSSVSYKVLLNGAPRGFIKPTRG 182
>gb|AAB48348.1| reverse transcriptase, partial [Arabidopsis thaliana]
Length = 199
Score = 150 bits (378), Expect = 2e-34
Identities = 77/160 (48%), Positives = 103/160 (64%)
Frame = +1
Query: 4 SFFTSGKILKKMNNALVTLIPKCPNPSYISQFRPISLCNVSYKIISKILANRLKPCLPDC 183
+F +S +++N + LIPK P +++FRPISLCNVSYK+ISK+L++RLK LPD
Sbjct: 29 NFHSSASFDERLNETNICLIPKIDRPRRMAEFRPISLCNVSYKVISKVLSSRLKKILPDL 88
Query: 184 VCLNQSAFLSDRFILDNVVVAHEAFHFLNRHRSGNKFYMAIKLDMMKAYDRVEWGGLRVV 363
+ QSAF++ R I DN++VA E FH L + + K +MAIK DM KAY RVEW LR +
Sbjct: 89 ISETQSAFVAGRLITDNILVAQENFHALRTNPACRKKFMAIKTDMSKAYGRVEWSFLRAL 148
Query: 364 MLKMGFAHIFVDWIXXXXXXXXXXFNLNGKSKGLVIPSRG 483
MLKMGFA +VD I LNG +G + P+RG
Sbjct: 149 MLKMGFAQKWVDLIMFCVSSVSYKVLLNGAPRGFIKPTRG 188
>gb|EMJ28511.1| hypothetical protein PRUPE_ppa016553mg [Prunus persica]
Length = 992
Score = 149 bits (375), Expect = 5e-34
Identities = 75/159 (47%), Positives = 101/159 (63%)
Frame = +1
Query: 7 FFTSGKILKKMNNALVTLIPKCPNPSYISQFRPISLCNVSYKIISKILANRLKPCLPDCV 186
F TSG++L+K+N V LIPK +P +SQ RPISLCNV +KI +K+LANRLK L +
Sbjct: 119 FLTSGRLLQKINFTHVVLIPKVKHPKDMSQLRPISLCNVLFKIATKVLANRLKLILDKII 178
Query: 187 CLNQSAFLSDRFILDNVVVAHEAFHFLNRHRSGNKFYMAIKLDMMKAYDRVEWGGLRVVM 366
+QSA +S R I DN ++A E H+L R R G K +MA+K+DM KAYDR+EW L +M
Sbjct: 179 SPSQSALISGRLISDNTILAAEIIHYLRRRRRGKKGFMALKMDMSKAYDRIEWSFLEAIM 238
Query: 367 LKMGFAHIFVDWIXXXXXXXXXXFNLNGKSKGLVIPSRG 483
K+GFA ++ + F +NG G + PSRG
Sbjct: 239 RKLGFAEQWIQLMLTCISTVSYSFVINGTPHGFLHPSRG 277
>ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 1152
Score = 148 bits (373), Expect = 8e-34
Identities = 78/159 (49%), Positives = 100/159 (62%)
Frame = +1
Query: 7 FFTSGKILKKMNNALVTLIPKCPNPSYISQFRPISLCNVSYKIISKILANRLKPCLPDCV 186
F S ++L+++N VTLIPK +P Y++Q RPISLCNV YK+ SK+LANR+KP L D +
Sbjct: 232 FLNSKELLREINCTWVTLIPKVKSPEYVTQLRPISLCNVIYKLGSKVLANRIKPLLDDII 291
Query: 187 CLNQSAFLSDRFILDNVVVAHEAFHFLNRHRSGNKFYMAIKLDMMKAYDRVEWGGLRVVM 366
QSAF+ R I DN ++A E H L RSG A+KLDM KAYDRVEW L V+
Sbjct: 292 SQQQSAFVPGRLISDNSLLAFEVSHCLKCRRSGKVGLCALKLDMSKAYDRVEWCFLEKVL 351
Query: 367 LKMGFAHIFVDWIXXXXXXXXXXFNLNGKSKGLVIPSRG 483
K+GF FV WI F +NG+ G +IP+RG
Sbjct: 352 GKLGFGDTFVRWIMHCITTVSYSFLVNGEPCGKLIPTRG 390
>gb|AAM01179.2|AC113336_31 Putative retroelement [Oryza sativa Japonica Group]
Length = 1888
Score = 147 bits (370), Expect = 2e-33
Identities = 74/159 (46%), Positives = 93/159 (58%)
Frame = +1
Query: 7 FFTSGKILKKMNNALVTLIPKCPNPSYISQFRPISLCNVSYKIISKILANRLKPCLPDCV 186
FF+ G + +N + LIPK P + FRPISLCNV YKI+SK L NRL+P L D V
Sbjct: 1045 FFSLGTMPSGVNETAIVLIPKTEQPQELKDFRPISLCNVVYKIVSKCLVNRLRPILDDLV 1104
Query: 187 CLNQSAFLSDRFILDNVVVAHEAFHFLNRHRSGNKFYMAIKLDMMKAYDRVEWGGLRVVM 366
NQSAF+ R I DN ++A E FH + R+++ Y A KLD+ KAYDRV+W L M
Sbjct: 1105 SQNQSAFVPGRLITDNALIAFEYFHHIQRNKNPENAYSAYKLDLSKAYDRVDWEFLEQAM 1164
Query: 367 LKMGFAHIFVDWIXXXXXXXXXXFNLNGKSKGLVIPSRG 483
+K+GFAH +V WI LNG PSRG
Sbjct: 1165 VKLGFAHCWVKWIMACITLVRYAVKLNGTLLNTFAPSRG 1203
>gb|ABB46931.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1853
Score = 147 bits (370), Expect = 2e-33
Identities = 74/159 (46%), Positives = 93/159 (58%)
Frame = +1
Query: 7 FFTSGKILKKMNNALVTLIPKCPNPSYISQFRPISLCNVSYKIISKILANRLKPCLPDCV 186
FF+ G + +N + LIPK P + FRPISLCNV YKI+SK L NRL+P L D V
Sbjct: 1010 FFSLGTMPSGVNETAIVLIPKTEQPQELKDFRPISLCNVVYKIVSKCLVNRLRPILDDLV 1069
Query: 187 CLNQSAFLSDRFILDNVVVAHEAFHFLNRHRSGNKFYMAIKLDMMKAYDRVEWGGLRVVM 366
NQSAF+ R I DN ++A E FH + R+++ Y A KLD+ KAYDRV+W L M
Sbjct: 1070 SQNQSAFVPGRLITDNALIAFEYFHHIQRNKNPENAYSAYKLDLSKAYDRVDWEFLEQAM 1129
Query: 367 LKMGFAHIFVDWIXXXXXXXXXXFNLNGKSKGLVIPSRG 483
+K+GFAH +V WI LNG PSRG
Sbjct: 1130 VKLGFAHCWVKWIMACITLVRYAVKLNGTLLNTFAPSRG 1168
>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
Length = 1142
Score = 145 bits (367), Expect = 4e-33
Identities = 72/160 (45%), Positives = 97/160 (60%)
Frame = +1
Query: 4 SFFTSGKILKKMNNALVTLIPKCPNPSYISQFRPISLCNVSYKIISKILANRLKPCLPDC 183
SF G K++N + LIPK P+ +++ RPISLCNV YK+ISKIL RLK LP+
Sbjct: 257 SFLQEGVFDKRLNTTNICLIPKTERPTRMTELRPISLCNVGYKVISKILCQRLKTVLPNL 316
Query: 184 VCLNQSAFLSDRFILDNVVVAHEAFHFLNRHRSGNKFYMAIKLDMMKAYDRVEWGGLRVV 363
+ QSAF+ R I DN+++A E FH L + S +MAIK DM KAYD+VEW + +
Sbjct: 317 ISETQSAFVDGRLISDNILIAQEMFHGLRTNSSCKDKFMAIKTDMSKAYDQVEWNFIEAL 376
Query: 364 MLKMGFAHIFVDWIXXXXXXXXXXFNLNGKSKGLVIPSRG 483
+ KMGF ++ WI +NG+ KGL+IP RG
Sbjct: 377 LRKMGFCEKWISWIMWCITTVQYKVLINGQPKGLIIPERG 416
>gb|EEC83100.1| hypothetical protein OsI_28249 [Oryza sativa Indica Group]
Length = 1300
Score = 145 bits (367), Expect = 4e-33
Identities = 73/159 (45%), Positives = 93/159 (58%)
Frame = +1
Query: 7 FFTSGKILKKMNNALVTLIPKCPNPSYISQFRPISLCNVSYKIISKILANRLKPCLPDCV 186
FF +G + +N + LIPK PS + FRPISLCNV YK++SK L NR++P L + V
Sbjct: 396 FFHTGVMPDDVNETTIVLIPKVAQPSQLKDFRPISLCNVLYKVVSKCLVNRMRPILDEVV 455
Query: 187 CLNQSAFLSDRFILDNVVVAHEAFHFLNRHRSGNKFYMAIKLDMMKAYDRVEWGGLRVVM 366
NQSAF+ R I DN ++A E FHF+ ++RS N A KLD+ KAYDRV+W L M
Sbjct: 456 SPNQSAFVPGRLITDNALLAFECFHFIQKNRSPNNAACAYKLDLSKAYDRVDWRFLEQAM 515
Query: 367 LKMGFAHIFVDWIXXXXXXXXXXFNLNGKSKGLVIPSRG 483
KMGFAH +V WI NG P+RG
Sbjct: 516 YKMGFAHRWVSWIMSCITTVRYAIKFNGTLLSTFAPTRG 554
>gb|EMJ00800.1| hypothetical protein PRUPE_ppa023095mg, partial [Prunus persica]
Length = 933
Score = 144 bits (364), Expect = 9e-33
Identities = 79/159 (49%), Positives = 96/159 (60%)
Frame = +1
Query: 7 FFTSGKILKKMNNALVTLIPKCPNPSYISQFRPISLCNVSYKIISKILANRLKPCLPDCV 186
FFT I K +N+ + LIPK PNP +SQFRPISLCN SYKI+SKILANRLKP LP +
Sbjct: 121 FFTGQAIPKPLNSTQIVLIPKIPNPEAVSQFRPISLCNFSYKILSKILANRLKPHLPSII 180
Query: 187 CLNQSAFLSDRFILDNVVVAHEAFHFLNRHRSGNKFYMAIKLDMMKAYDRVEWGGLRVVM 366
Q+AF+ DR I DN++VAHE FH L +S KF M +KLDM KAYDRVEW L ++
Sbjct: 181 SPTQNAFVPDRQIQDNILVAHEVFHALKLKKSKKKFEMGVKLDMNKAYDRVEWDFLEKLV 240
Query: 367 LKMGFAHIFVDWIXXXXXXXXXXFNLNGKSKGLVIPSRG 483
+ F +NG+ G PSRG
Sbjct: 241 MSCVTTVNFT-------------VVINGQRGGAFSPSRG 266
>gb|EEE69906.1| hypothetical protein OsJ_29747 [Oryza sativa Japonica Group]
Length = 1139
Score = 144 bits (363), Expect = 1e-32
Identities = 71/159 (44%), Positives = 96/159 (60%)
Frame = +1
Query: 7 FFTSGKILKKMNNALVTLIPKCPNPSYISQFRPISLCNVSYKIISKILANRLKPCLPDCV 186
FF SG + +N+ + LIPK P+ + RPISLCNV YK++SK L NRL+P L + +
Sbjct: 724 FFRSGIMPAGVNDTAIVLIPKIDQPTELKDLRPISLCNVIYKVVSKCLVNRLRPLLDELI 783
Query: 187 CLNQSAFLSDRFILDNVVVAHEAFHFLNRHRSGNKFYMAIKLDMMKAYDRVEWGGLRVVM 366
+NQSAF+ R I DN ++A E FH++ ++++ NK A KLD+ KAYDRV+WG L M
Sbjct: 784 SVNQSAFVPGRMITDNALLAFECFHYIQKNKNPNKAASAYKLDLSKAYDRVDWGFLEQAM 843
Query: 367 LKMGFAHIFVDWIXXXXXXXXXXFNLNGKSKGLVIPSRG 483
K+GFAH +V WI NG PSRG
Sbjct: 844 YKLGFAHRWVRWIMECITTVRYSVKFNGTLLHSFAPSRG 882
>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
gi|7267666|emb|CAB78094.1| RNA-directed DNA
polymerase-like protein [Arabidopsis thaliana]
Length = 1274
Score = 144 bits (362), Expect = 2e-32
Identities = 74/162 (45%), Positives = 102/162 (62%), Gaps = 2/162 (1%)
Frame = +1
Query: 4 SFFTSGKILKKMNNALVTLIPKCPNPSYISQFRPISLCNVSYKIISKILANRLKPCLPDC 183
SFF + ++N VTLIPK P +S +RPI+LCNV YKI++KIL RL+P L +
Sbjct: 414 SFFVDSCLSPRLNETHVTLIPKISAPRKVSDYRPIALCNVQYKIVAKILTRRLQPWLSEL 473
Query: 184 VCLNQSAFLSDRFILDNVVVAHEAFHFLNRHRSGNKFY--MAIKLDMMKAYDRVEWGGLR 357
+ L+QSAF+ R I DNV++ HE HFL SG K Y MAIK DM KAYDR++W L+
Sbjct: 474 ISLHQSAFVPGRAIADNVLITHEILHFL--RVSGAKKYCSMAIKTDMSKAYDRIKWNFLQ 531
Query: 358 VVMLKMGFAHIFVDWIXXXXXXXXXXFNLNGKSKGLVIPSRG 483
V++++GF ++ W+ F +NG +G V+PSRG
Sbjct: 532 EVLMRLGFHDKWIRWVMQCVCTVSYSFLINGSPQGSVVPSRG 573
>pir||S65819 RNA-directed DNA polymerase (EC 2.7.7.49) (clone N2) - Arabidopsis
thaliana retrotransposon Ta24 (fragment)
Length = 184
Score = 143 bits (361), Expect = 2e-32
Identities = 74/159 (46%), Positives = 99/159 (62%)
Frame = +1
Query: 7 FFTSGKILKKMNNALVTLIPKCPNPSYISQFRPISLCNVSYKIISKILANRLKPCLPDCV 186
FF G + + N + LIPK +P+ + RPISLC+V YKIISK++ RL+P LP V
Sbjct: 24 FFEMGVLPVEWNFTHLCLIPKTIHPTEMVDLRPISLCSVLYKIISKVIVKRLQPLLPQIV 83
Query: 187 CLNQSAFLSDRFILDNVVVAHEAFHFLNRHRSGNKFYMAIKLDMMKAYDRVEWGGLRVVM 366
+NQSAF+S+R I DN++VAHE H L H S + +MAIK DM KAYDRVEW LR ++
Sbjct: 84 SVNQSAFVSERLITDNILVAHELVHSLRTHPSISSEFMAIKSDMSKAYDRVEWSFLRALL 143
Query: 367 LKMGFAHIFVDWIXXXXXXXXXXFNLNGKSKGLVIPSRG 483
L +GF +V+WI +N + GL+ P RG
Sbjct: 144 LALGFHQRWVEWIMTCVSTVTYSVLINDQPYGLITPERG 182
>ref|XP_004295858.1| PREDICTED: uncharacterized protein LOC101314838 [Fragaria vesca
subsp. vesca]
Length = 1524
Score = 143 bits (361), Expect = 2e-32
Identities = 71/159 (44%), Positives = 97/159 (61%)
Frame = +1
Query: 7 FFTSGKILKKMNNALVTLIPKCPNPSYISQFRPISLCNVSYKIISKILANRLKPCLPDCV 186
F S ++++++N+ VTLIPK P Y+ Q RPISLCNV YK+ SK+LANR+KP L D +
Sbjct: 964 FLNSEELIREINHTWVTLIPKVKTPEYVHQLRPISLCNVIYKLGSKVLANRIKPLLDDII 1023
Query: 187 CLNQSAFLSDRFILDNVVVAHEAFHFLNRHRSGNKFYMAIKLDMMKAYDRVEWGGLRVVM 366
+Q F+ R I DN ++A E H L R + G Y A+K+DM KAYDRVEW L V+
Sbjct: 1024 SQHQGTFVPGRLISDNSLLAFEISHCLKRRKRGKVGYCALKIDMSKAYDRVEWSFLETVL 1083
Query: 367 LKMGFAHIFVDWIXXXXXXXXXXFNLNGKSKGLVIPSRG 483
K+GF + W+ F +NG+ VIP+RG
Sbjct: 1084 SKLGFGGNLLRWVMNCVRTVSYSFLVNGEPSREVIPTRG 1122
>gb|AAB48344.1| reverse transcriptase, partial [Arabidopsis thaliana]
Length = 199
Score = 143 bits (361), Expect = 2e-32
Identities = 73/160 (45%), Positives = 98/160 (61%)
Frame = +1
Query: 4 SFFTSGKILKKMNNALVTLIPKCPNPSYISQFRPISLCNVSYKIISKILANRLKPCLPDC 183
SFF S + +N + LIPK +P + +RPI+LC V YKIISK+L+ RL+P L D
Sbjct: 29 SFFASNNLPANINLTHIRLIPKITSPQKMVDYRPIALCTVFYKIISKLLSKRLQPVLQDI 88
Query: 184 VCLNQSAFLSDRFILDNVVVAHEAFHFLNRHRSGNKFYMAIKLDMMKAYDRVEWGGLRVV 363
V N SAF+ R I DNV++ HE H+L + + +MA+K DM KAYDR+EW +R+V
Sbjct: 89 VSENHSAFVPKRAITDNVLITHEVLHYLKTSGAKKRCFMAVKSDMSKAYDRIEWDFIRLV 148
Query: 364 MLKMGFAHIFVDWIXXXXXXXXXXFNLNGKSKGLVIPSRG 483
M KMGF +V+WI F LNG ++G V P RG
Sbjct: 149 MEKMGFHPKWVEWIMQCITTVSYSFLLNGAAQGSVKPQRG 188
>gb|AAB48347.1| reverse transcriptase, partial [Arabidopsis thaliana]
Length = 199
Score = 143 bits (361), Expect = 2e-32
Identities = 74/159 (46%), Positives = 99/159 (62%)
Frame = +1
Query: 7 FFTSGKILKKMNNALVTLIPKCPNPSYISQFRPISLCNVSYKIISKILANRLKPCLPDCV 186
FF G + + N + LIPK +P+ + RPISLC+V YKIISK++ RL+P LP V
Sbjct: 30 FFEMGVLPVEWNFTHLCLIPKTIHPTEMVDLRPISLCSVLYKIISKVIVKRLQPLLPQIV 89
Query: 187 CLNQSAFLSDRFILDNVVVAHEAFHFLNRHRSGNKFYMAIKLDMMKAYDRVEWGGLRVVM 366
+NQSAF+S+R I DN++VAHE H L H S + +MAIK DM KAYDRVEW LR ++
Sbjct: 90 SVNQSAFVSERLITDNILVAHELVHSLRTHPSISSEFMAIKSDMSKAYDRVEWSFLRALL 149
Query: 367 LKMGFAHIFVDWIXXXXXXXXXXFNLNGKSKGLVIPSRG 483
L +GF +V+WI +N + GL+ P RG
Sbjct: 150 LALGFHQRWVEWIMTCVSTVTYSVLINDQPYGLITPERG 188
>pir||S65818 RNA-directed DNA polymerase (EC 2.7.7.49) (clone N7) - Arabidopsis
thaliana retrotransposon Ta20 (fragment)
Length = 184
Score = 143 bits (361), Expect = 2e-32
Identities = 73/160 (45%), Positives = 98/160 (61%)
Frame = +1
Query: 4 SFFTSGKILKKMNNALVTLIPKCPNPSYISQFRPISLCNVSYKIISKILANRLKPCLPDC 183
SFF S + +N + LIPK +P + +RPI+LC V YKIISK+L+ RL+P L D
Sbjct: 23 SFFASNNLPANINLTHIRLIPKITSPQKMVDYRPIALCTVFYKIISKLLSKRLQPVLQDI 82
Query: 184 VCLNQSAFLSDRFILDNVVVAHEAFHFLNRHRSGNKFYMAIKLDMMKAYDRVEWGGLRVV 363
V N SAF+ R I DNV++ HE H+L + + +MA+K DM KAYDR+EW +R+V
Sbjct: 83 VSENHSAFVPKRAITDNVLITHEVLHYLKTSGAKKRCFMAVKSDMSKAYDRIEWDFIRLV 142
Query: 364 MLKMGFAHIFVDWIXXXXXXXXXXFNLNGKSKGLVIPSRG 483
M KMGF +V+WI F LNG ++G V P RG
Sbjct: 143 MEKMGFHPKWVEWIMQCITTVSYSFLLNGAAQGSVKPQRG 182
>gb|EEE52364.1| hypothetical protein OsJ_34428 [Oryza sativa Japonica Group]
Length = 1102
Score = 143 bits (360), Expect = 3e-32
Identities = 71/160 (44%), Positives = 97/160 (60%)
Frame = +1
Query: 4 SFFTSGKILKKMNNALVTLIPKCPNPSYISQFRPISLCNVSYKIISKILANRLKPCLPDC 183
+FF G + + +N+ + LIPK P+ + +RPISLCNV YK++SK L NRL+P L +
Sbjct: 893 NFFIIGVMPEGINDTAIVLIPKIKQPTQLKDYRPISLCNVIYKVVSKCLVNRLRPFLDEL 952
Query: 184 VCLNQSAFLSDRFILDNVVVAHEAFHFLNRHRSGNKFYMAIKLDMMKAYDRVEWGGLRVV 363
V NQSAF+ +R I DN +VA E FHF+ ++++ NK A KLD+ KAY+RV+W L
Sbjct: 953 VSPNQSAFVPERLITDNALVAFECFHFIQKNKNPNKAACAYKLDLSKAYNRVDWRFLEQA 1012
Query: 364 MLKMGFAHIFVDWIXXXXXXXXXXFNLNGKSKGLVIPSRG 483
M KMGFAH +V WI NG P+RG
Sbjct: 1013 MHKMGFAHRWVSWIMSCVTTVRYSVKFNGTLLSAFAPTRG 1052
>gb|EEC84753.1| hypothetical protein OsI_31756 [Oryza sativa Indica Group]
Length = 1350
Score = 143 bits (360), Expect = 3e-32
Identities = 71/159 (44%), Positives = 95/159 (59%)
Frame = +1
Query: 7 FFTSGKILKKMNNALVTLIPKCPNPSYISQFRPISLCNVSYKIISKILANRLKPCLPDCV 186
FF SG + +N+ + LIPK P+ + RPI LCNV YK++SK L NRLKP L + +
Sbjct: 673 FFRSGIMPVGVNDTAIVLIPKIDQPTELKDLRPIGLCNVIYKVVSKCLVNRLKPLLDELI 732
Query: 187 CLNQSAFLSDRFILDNVVVAHEAFHFLNRHRSGNKFYMAIKLDMMKAYDRVEWGGLRVVM 366
+NQSAF+ R I DN ++A E FH++ ++++ NK A KLD+ KAYDRV+WG L M
Sbjct: 733 SVNQSAFVPGRMITDNALLAFEYFHYIQKNKNPNKAASAYKLDLSKAYDRVDWGFLEQAM 792
Query: 367 LKMGFAHIFVDWIXXXXXXXXXXFNLNGKSKGLVIPSRG 483
K+GFAH +V WI NG PSRG
Sbjct: 793 YKLGFAHRWVRWIMECITTVRYSVKFNGTLLDSFAPSRG 831