BLASTX nr result
ID: Rehmannia24_contig00030072
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00030072
(514 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera] 108 2e-50
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera] 108 2e-50
emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera] 107 5e-50
emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera] 105 1e-49
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera] 105 5e-48
emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera] 108 6e-48
emb|CAN74847.1| hypothetical protein VITISV_028741 [Vitis vinifera] 103 2e-47
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi... 92 3e-45
dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis t... 89 7e-41
gb|EOY05030.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) ... 74 4e-37
gb|ABH07899.1| putative polyprotein [Solanum lycopersicum] 72 6e-37
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera] 74 2e-35
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera] 75 2e-35
gb|ACB45089.1| putative polyprotein [Solanum habrochaites] 66 5e-35
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha... 97 6e-35
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t... 96 1e-34
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th... 94 3e-34
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi... 94 5e-34
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi... 70 1e-33
emb|CAN63908.1| hypothetical protein VITISV_044218 [Vitis vinifera] 70 1e-33
>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
Length = 1178
Score = 108 bits (269), Expect(3) = 2e-50
Identities = 52/72 (72%), Positives = 60/72 (83%)
Frame = -3
Query: 338 FLTIVDDFSRATWVYLLYDKKEVETMFMNFISMVDRQFDKKVKVVRSDNRTEFFCLINYF 159
FLTIVDDFSRA W+YLL DK EV MFM+FI+MVDRQF + VKVV+SDN TEF CL++YF
Sbjct: 344 FLTIVDDFSRAVWIYLLVDKTEVFRMFMSFIAMVDRQFSQTVKVVQSDNGTEFKCLLDYF 403
Query: 158 VKHGILFETSCV 123
GILF+TSCV
Sbjct: 404 SATGILFQTSCV 415
Score = 75.9 bits (185), Expect(3) = 2e-50
Identities = 35/40 (87%), Positives = 36/40 (90%)
Frame = -2
Query: 120 TPQQNGRVERKHRHILNVARALRFQGNLPIKFWGECVLAA 1
TPQQNGRVERKH+HILNV RALRFQ NLPI FWGE VLAA
Sbjct: 417 TPQQNGRVERKHKHILNVGRALRFQANLPIYFWGESVLAA 456
Score = 61.6 bits (148), Expect(3) = 2e-50
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = -2
Query: 480 SCDVCHMAKQKKLPFPISQNKASAIFDLIHCELWGPYKIPSSCGA 346
+C++C AK + FP+S NKA+ IF+ IHC+LWG YK SSCGA
Sbjct: 297 ACEICFRAKHXRDKFPLSDNKATRIFEKIHCDLWGSYKHVSSCGA 341
>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
Length = 1099
Score = 108 bits (269), Expect(3) = 2e-50
Identities = 52/72 (72%), Positives = 60/72 (83%)
Frame = -3
Query: 338 FLTIVDDFSRATWVYLLYDKKEVETMFMNFISMVDRQFDKKVKVVRSDNRTEFFCLINYF 159
FLTIVDDFSRA W+YLL DK EV MFM+FI+MVDRQF + VKVV+SDN TEF CL++YF
Sbjct: 258 FLTIVDDFSRAVWIYLLVDKTEVFRMFMSFIAMVDRQFSQTVKVVQSDNGTEFKCLLDYF 317
Query: 158 VKHGILFETSCV 123
GILF+TSCV
Sbjct: 318 SATGILFQTSCV 329
Score = 75.9 bits (185), Expect(3) = 2e-50
Identities = 35/40 (87%), Positives = 36/40 (90%)
Frame = -2
Query: 120 TPQQNGRVERKHRHILNVARALRFQGNLPIKFWGECVLAA 1
TPQQNGRVERKH+HILNV RALRFQ NLPI FWGE VLAA
Sbjct: 331 TPQQNGRVERKHKHILNVGRALRFQANLPIYFWGESVLAA 370
Score = 61.6 bits (148), Expect(3) = 2e-50
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = -2
Query: 480 SCDVCHMAKQKKLPFPISQNKASAIFDLIHCELWGPYKIPSSCGA 346
+C++C AK + FP+S NKA+ IF+ IHC+LWG YK SSCGA
Sbjct: 211 ACEICFRAKHPRDKFPLSDNKATRIFEKIHCDLWGSYKHVSSCGA 255
>emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]
Length = 1191
Score = 107 bits (266), Expect(3) = 5e-50
Identities = 51/72 (70%), Positives = 60/72 (83%)
Frame = -3
Query: 338 FLTIVDDFSRATWVYLLYDKKEVETMFMNFISMVDRQFDKKVKVVRSDNRTEFFCLINYF 159
FLTIVDDFSRA W+YLL DK +V MFM+FI+MVDRQF + VKVV+SDN TEF CL++YF
Sbjct: 303 FLTIVDDFSRAVWIYLLVDKTDVFRMFMSFIAMVDRQFSQTVKVVQSDNGTEFKCLLDYF 362
Query: 158 VKHGILFETSCV 123
GILF+TSCV
Sbjct: 363 SATGILFQTSCV 374
Score = 75.9 bits (185), Expect(3) = 5e-50
Identities = 35/40 (87%), Positives = 36/40 (90%)
Frame = -2
Query: 120 TPQQNGRVERKHRHILNVARALRFQGNLPIKFWGECVLAA 1
TPQQNGRVERKH+HILNV RALRFQ NLPI FWGE VLAA
Sbjct: 376 TPQQNGRVERKHKHILNVGRALRFQANLPIYFWGESVLAA 415
Score = 61.6 bits (148), Expect(3) = 5e-50
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = -2
Query: 480 SCDVCHMAKQKKLPFPISQNKASAIFDLIHCELWGPYKIPSSCGA 346
+C++C AK + FP+S NKA+ IF+ IHC+LWG YK SSCGA
Sbjct: 256 ACEICFRAKHPRDKFPLSDNKATRIFEKIHCDLWGSYKHVSSCGA 300
>emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]
Length = 1196
Score = 105 bits (263), Expect(3) = 1e-49
Identities = 51/72 (70%), Positives = 60/72 (83%)
Frame = -3
Query: 338 FLTIVDDFSRATWVYLLYDKKEVETMFMNFISMVDRQFDKKVKVVRSDNRTEFFCLINYF 159
FLTIVDDFSRA W+YLL DK EV MFM+FI+MVD+QF + VKVV+SDN TEF CL++YF
Sbjct: 471 FLTIVDDFSRAVWIYLLVDKTEVFQMFMSFIAMVDQQFSQIVKVVQSDNGTEFKCLLDYF 530
Query: 158 VKHGILFETSCV 123
GILF+TSCV
Sbjct: 531 SATGILFQTSCV 542
Score = 75.9 bits (185), Expect(3) = 1e-49
Identities = 35/40 (87%), Positives = 36/40 (90%)
Frame = -2
Query: 120 TPQQNGRVERKHRHILNVARALRFQGNLPIKFWGECVLAA 1
TPQQNGRVERKH+HILNV RALRFQ NLPI FWGE VLAA
Sbjct: 544 TPQQNGRVERKHKHILNVGRALRFQANLPIYFWGESVLAA 583
Score = 61.6 bits (148), Expect(3) = 1e-49
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = -2
Query: 480 SCDVCHMAKQKKLPFPISQNKASAIFDLIHCELWGPYKIPSSCGA 346
+C++C AK + FP+S NKA+ IF+ IHC+LWG YK SSCGA
Sbjct: 424 ACEICFRAKHPRDKFPLSDNKATRIFEKIHCDLWGSYKHVSSCGA 468
>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
Length = 1450
Score = 105 bits (263), Expect(3) = 5e-48
Identities = 50/72 (69%), Positives = 60/72 (83%)
Frame = -3
Query: 338 FLTIVDDFSRATWVYLLYDKKEVETMFMNFISMVDRQFDKKVKVVRSDNRTEFFCLINYF 159
FLTI+DDFSRA W+YLL +K EV MFM+FI+MVDRQF + VKVV+SDN TEF CL++YF
Sbjct: 591 FLTIIDDFSRAVWIYLLVNKTEVFRMFMSFIAMVDRQFSQTVKVVQSDNGTEFKCLLDYF 650
Query: 158 VKHGILFETSCV 123
GILF+TSCV
Sbjct: 651 SATGILFQTSCV 662
Score = 73.9 bits (180), Expect(3) = 5e-48
Identities = 34/40 (85%), Positives = 35/40 (87%)
Frame = -2
Query: 120 TPQQNGRVERKHRHILNVARALRFQGNLPIKFWGECVLAA 1
TPQQNGRVERKH+HILNV RAL FQ NLPI FWGE VLAA
Sbjct: 664 TPQQNGRVERKHKHILNVGRALHFQANLPIYFWGESVLAA 703
Score = 58.2 bits (139), Expect(3) = 5e-48
Identities = 23/45 (51%), Positives = 32/45 (71%)
Frame = -2
Query: 480 SCDVCHMAKQKKLPFPISQNKASAIFDLIHCELWGPYKIPSSCGA 346
+C++C AK + FP++ NKA+ IF+ IHC+LWG YK SSC A
Sbjct: 544 ACEICFRAKHPRDKFPLTDNKATRIFEKIHCDLWGSYKHVSSCAA 588
>emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]
Length = 1129
Score = 108 bits (269), Expect(3) = 6e-48
Identities = 52/72 (72%), Positives = 60/72 (83%)
Frame = -3
Query: 338 FLTIVDDFSRATWVYLLYDKKEVETMFMNFISMVDRQFDKKVKVVRSDNRTEFFCLINYF 159
FLTIVDDFSRA W+YLL DK EV MFM+FI+MVDRQF + VKVV+SDN TEF CL++YF
Sbjct: 339 FLTIVDDFSRAVWIYLLVDKTEVFRMFMSFIAMVDRQFSQTVKVVQSDNGTEFKCLLDYF 398
Query: 158 VKHGILFETSCV 123
GILF+TSCV
Sbjct: 399 SATGILFQTSCV 410
Score = 70.1 bits (170), Expect(3) = 6e-48
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = -2
Query: 120 TPQQNGRVERKHRHILNVARALRFQGNLPIKFWGE 16
TPQQNGRVERKH+HILNV RALRFQ NLPI FWGE
Sbjct: 412 TPQQNGRVERKHKHILNVGRALRFQANLPIYFWGE 446
Score = 59.3 bits (142), Expect(3) = 6e-48
Identities = 24/45 (53%), Positives = 32/45 (71%)
Frame = -2
Query: 480 SCDVCHMAKQKKLPFPISQNKASAIFDLIHCELWGPYKIPSSCGA 346
+C++C AK + FP+S NKA+ IF+ IHC+LW YK SSCGA
Sbjct: 292 ACEICFRAKHPRDKFPLSDNKATRIFEKIHCDLWASYKHVSSCGA 336
>emb|CAN74847.1| hypothetical protein VITISV_028741 [Vitis vinifera]
Length = 1262
Score = 103 bits (258), Expect(3) = 2e-47
Identities = 51/72 (70%), Positives = 59/72 (81%)
Frame = -3
Query: 338 FLTIVDDFSRATWVYLLYDKKEVETMFMNFISMVDRQFDKKVKVVRSDNRTEFFCLINYF 159
FLTIVDDFSRA W+YLL DK EV MFM+FI+MVDRQF + VKVV+SDN TEF L++YF
Sbjct: 590 FLTIVDDFSRAVWIYLLVDKTEVFRMFMSFIAMVDRQFSQTVKVVQSDNGTEFKWLLDYF 649
Query: 158 VKHGILFETSCV 123
GILF+TSCV
Sbjct: 650 SXTGILFQTSCV 661
Score = 73.6 bits (179), Expect(3) = 2e-47
Identities = 34/40 (85%), Positives = 35/40 (87%)
Frame = -2
Query: 120 TPQQNGRVERKHRHILNVARALRFQGNLPIKFWGECVLAA 1
TPQQNGRVERKH+HILNV RALRFQ NLPI FWGE VL A
Sbjct: 663 TPQQNGRVERKHKHILNVXRALRFQANLPIYFWGESVLXA 702
Score = 58.5 bits (140), Expect(3) = 2e-47
Identities = 24/45 (53%), Positives = 32/45 (71%)
Frame = -2
Query: 480 SCDVCHMAKQKKLPFPISQNKASAIFDLIHCELWGPYKIPSSCGA 346
+C++C AK + F +S NKA+ IF+ IHC+LWG YK SSCGA
Sbjct: 543 ACEICFRAKHPRDKFSLSDNKATRIFEKIHCDLWGSYKHVSSCGA 587
>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1496
Score = 91.7 bits (226), Expect(3) = 3e-45
Identities = 41/73 (56%), Positives = 52/73 (71%)
Frame = -3
Query: 338 FLTIVDDFSRATWVYLLYDKKEVETMFMNFISMVDRQFDKKVKVVRSDNRTEFFCLINYF 159
FLT+VDD+SR+ W YL+ K EV + NF +M +RQF K+VK R+DN TEF CL YF
Sbjct: 579 FLTLVDDYSRSVWTYLMSSKTEVSQLIKNFCAMSERQFGKQVKAFRTDNGTEFMCLTPYF 638
Query: 158 VKHGILFETSCVE 120
HGIL +TSCV+
Sbjct: 639 QTHGILHQTSCVD 651
Score = 76.6 bits (187), Expect(3) = 3e-45
Identities = 34/40 (85%), Positives = 36/40 (90%)
Frame = -2
Query: 120 TPQQNGRVERKHRHILNVARALRFQGNLPIKFWGECVLAA 1
TPQQNGRVERKHRHILNVARA FQGNLP+KFWGE +L A
Sbjct: 652 TPQQNGRVERKHRHILNVARACLFQGNLPVKFWGESILTA 691
Score = 60.5 bits (145), Expect(3) = 3e-45
Identities = 26/53 (49%), Positives = 33/53 (62%)
Frame = -2
Query: 504 SSHIHQFDSCDVCHMAKQKKLPFPISQNKASAIFDLIHCELWGPYKIPSSCGA 346
S + DSCD C +KQ + FPIS NK F LIH ++WGPY+ PS+ GA
Sbjct: 524 SQGFDKIDSCDTCFRSKQTREVFPISNNKTMECFSLIHGDVWGPYRTPSTTGA 576
>dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1098
Score = 88.6 bits (218), Expect(3) = 7e-41
Identities = 39/73 (53%), Positives = 53/73 (72%)
Frame = -3
Query: 338 FLTIVDDFSRATWVYLLYDKKEVETMFMNFISMVDRQFDKKVKVVRSDNRTEFFCLINYF 159
FLTIVDDFSR+ W +L+ +K EV + NF +M +RQF K +K V SDN TEF CL ++F
Sbjct: 582 FLTIVDDFSRSVWTFLMAEKSEVSRLIRNFCAMSERQFCKSIKTVHSDNGTEFMCLKSFF 641
Query: 158 VKHGILFETSCVE 120
+ GI+ +TSCV+
Sbjct: 642 QEQGIIHQTSCVD 654
Score = 65.5 bits (158), Expect(3) = 7e-41
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = -2
Query: 504 SSHIHQFDSCDVCHMAKQKKLPFPISQNKASAIFDLIHCELWGPYKIPSSCGA 346
SS + SCD+C+ AKQ + F S NK + F+LIHC++WGPY+ P+SCG+
Sbjct: 527 SSDLEIIKSCDICYRAKQAREVFSPSLNKTTVCFELIHCDVWGPYRTPASCGS 579
Score = 59.7 bits (143), Expect(3) = 7e-41
Identities = 29/40 (72%), Positives = 31/40 (77%)
Frame = -2
Query: 120 TPQQNGRVERKHRHILNVARALRFQGNLPIKFWGECVLAA 1
T QQNGRVERKHRHILNVAR FQ +LP KF GE +L A
Sbjct: 655 TRQQNGRVERKHRHILNVARTCLFQSHLPRKFRGESILTA 694
>gb|EOY05030.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma
cacao]
Length = 1141
Score = 73.9 bits (180), Expect(3) = 4e-37
Identities = 33/40 (82%), Positives = 34/40 (85%)
Frame = -2
Query: 120 TPQQNGRVERKHRHILNVARALRFQGNLPIKFWGECVLAA 1
TPQQNGRVER HRH+L VAR LRFQ LPIKFWGECVL A
Sbjct: 450 TPQQNGRVERNHRHLLEVARVLRFQAYLPIKFWGECVLTA 489
Score = 68.9 bits (167), Expect(3) = 4e-37
Identities = 35/73 (47%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Frame = -3
Query: 338 FLTIVDDFSRATWVYLLYDKKEVETMFMNFISMVDRQFDKKVKVVRSDNRTEF--FCLIN 165
FLTIV+D+SRA WVYL+ K + ++F V QF+ +VK+VRSDNR EF L+
Sbjct: 375 FLTIVNDYSRAIWVYLMKHKSKTRDYLLHFYQWVRTQFNTQVKIVRSDNRMEFKHSDLLT 434
Query: 164 YFVKHGILFETSC 126
Y+ ++GI +TSC
Sbjct: 435 YYNENGIERQTSC 447
Score = 58.2 bits (139), Expect(3) = 4e-37
Identities = 25/55 (45%), Positives = 37/55 (67%)
Frame = -2
Query: 510 NVSSHIHQFDSCDVCHMAKQKKLPFPISQNKASAIFDLIHCELWGPYKIPSSCGA 346
++S ++ + CD C A+Q +LPF S ++S IF+LIHC++WG YK PS GA
Sbjct: 318 DLSINVKENKFCDACCRARQHRLPFFASTYESSRIFELIHCDIWGDYKTPSLSGA 372
>gb|ABH07899.1| putative polyprotein [Solanum lycopersicum]
Length = 1428
Score = 72.4 bits (176), Expect(3) = 6e-37
Identities = 31/40 (77%), Positives = 36/40 (90%)
Frame = -2
Query: 120 TPQQNGRVERKHRHILNVARALRFQGNLPIKFWGECVLAA 1
TPQQNG VERKHRHILN+ARA+RFQ +LPI+FWG C+ AA
Sbjct: 655 TPQQNGVVERKHRHILNIARAIRFQAHLPIRFWGYCIRAA 694
Score = 71.2 bits (173), Expect(3) = 6e-37
Identities = 40/76 (52%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Frame = -3
Query: 344 HIFLTIVDDFSRATWVYLLYDKKEVETMFMNFISMVDRQFDKKVKVVRSDNRTEFF---C 174
H FLTIVDD+SR WV+LL K E NF SM++ QF+ VKVVRSDN TEF C
Sbjct: 578 HYFLTIVDDYSRFVWVHLLQLKSETIVAIKNFFSMINTQFNSHVKVVRSDNGTEFLNSQC 637
Query: 173 LINYFVKHGILFETSC 126
+ F GIL ++SC
Sbjct: 638 K-DLFNHLGILHQSSC 652
Score = 57.0 bits (136), Expect(3) = 6e-37
Identities = 21/40 (52%), Positives = 30/40 (75%)
Frame = -2
Query: 477 CDVCHMAKQKKLPFPISQNKASAIFDLIHCELWGPYKIPS 358
C VC +AKQ +L FP+S + S +FD++H +LWGPYK P+
Sbjct: 534 CPVCPLAKQTRLTFPVSTTRTSMMFDVVHMDLWGPYKTPT 573
>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
Length = 1316
Score = 73.6 bits (179), Expect(3) = 2e-35
Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Frame = -3
Query: 344 HIFLTIVDDFSRATWVYLLYDKKEVETMFMNFISMVDRQFDKKVKVVRSDNRTEFFC--L 171
H FLTIVDD SR W+YL+ +K E + + NF M QFDK VK +RSDN EF +
Sbjct: 464 HYFLTIVDDHSRGVWIYLMKEKSETKDILQNFCFMTKTQFDKPVKCIRSDNGLEFCXGQM 523
Query: 170 INYFVKHGILFETSCV 123
++++ + GIL E+S V
Sbjct: 524 MSFYKREGILRESSLV 539
Score = 72.0 bits (175), Expect(3) = 2e-35
Identities = 32/40 (80%), Positives = 34/40 (85%)
Frame = -2
Query: 120 TPQQNGRVERKHRHILNVARALRFQGNLPIKFWGECVLAA 1
TPQ NGRVERKH+HILN+AR LRFQ LPI FWGECVL A
Sbjct: 541 TPQXNGRVERKHQHILNIARTLRFQACLPIDFWGECVLTA 580
Score = 50.1 bits (118), Expect(3) = 2e-35
Identities = 20/44 (45%), Positives = 29/44 (65%)
Frame = -2
Query: 477 CDVCHMAKQKKLPFPISQNKASAIFDLIHCELWGPYKIPSSCGA 346
CD C KQ + F +S +A IF+LIH ++WGPY+ P++ GA
Sbjct: 420 CDSCCRGKQVRNSFQLSNKRAFEIFNLIHVDIWGPYRTPTTSGA 463
>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
Length = 1523
Score = 75.5 bits (184), Expect(3) = 2e-35
Identities = 35/72 (48%), Positives = 51/72 (70%)
Frame = -3
Query: 338 FLTIVDDFSRATWVYLLYDKKEVETMFMNFISMVDRQFDKKVKVVRSDNRTEFFCLINYF 159
FLTIVDD SR+TWVYL++ K E ++ ++F+++V QF +VK+VRSDN E F ++
Sbjct: 607 FLTIVDDHSRSTWVYLMHHKSEARSLLVHFVNLVANQFGSQVKIVRSDNGPE-FKHTQFY 665
Query: 158 VKHGILFETSCV 123
GIL +TSC+
Sbjct: 666 SSRGILHQTSCI 677
Score = 65.1 bits (157), Expect(3) = 2e-35
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = -2
Query: 120 TPQQNGRVERKHRHILNVARALRFQGNLPIKFWGECVLAA 1
TPQQNG VERKHRH+LNVARAL FQ +LP FWG+ +L A
Sbjct: 679 TPQQNGVVERKHRHLLNVARALLFQSHLPKPFWGDAILTA 718
Score = 54.7 bits (130), Expect(3) = 2e-35
Identities = 20/45 (44%), Positives = 31/45 (68%)
Frame = -2
Query: 480 SCDVCHMAKQKKLPFPISQNKASAIFDLIHCELWGPYKIPSSCGA 346
+C +C +AK + PFP+S + + + FDLIH ++WG Y +PS GA
Sbjct: 560 TCSICPLAKHTRTPFPLSVSSSDSCFDLIHVDIWGGYHVPSLSGA 604
>gb|ACB45089.1| putative polyprotein [Solanum habrochaites]
Length = 849
Score = 65.9 bits (159), Expect(3) = 5e-35
Identities = 29/37 (78%), Positives = 32/37 (86%)
Frame = -2
Query: 120 TPQQNGRVERKHRHILNVARALRFQGNLPIKFWGECV 10
TPQQNG VER+HR IL VARA+RFQ NLPI+FWG CV
Sbjct: 417 TPQQNGVVERRHRQILEVARAIRFQANLPIRFWGLCV 453
Score = 65.1 bits (157), Expect(3) = 5e-35
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Frame = -3
Query: 374 PIRYLRHVVPHIFLTIVDDFSRATWVYLLYDKKEVETMFMNFISMVDRQFDKKVKVVRSD 195
P ++ H FLT+VDD SR W++LL K +V + +F+ ++ RQF +K+ RSD
Sbjct: 330 PYKFPTHDGNRYFLTLVDDCSRMIWIFLLKYKSDVFIVLKDFLQLIQRQFGGYIKIFRSD 389
Query: 194 NRTEFF--CLINYFVKHGILFETSCV 123
N TEFF F GI+ ++SCV
Sbjct: 390 NGTEFFNSHCSELFRTAGIVHQSSCV 415
Score = 63.2 bits (152), Expect(3) = 5e-35
Identities = 27/55 (49%), Positives = 38/55 (69%)
Frame = -2
Query: 513 PNVSSHIHQFDSCDVCHMAKQKKLPFPISQNKASAIFDLIHCELWGPYKIPSSCG 349
P++SS + SC +C +AKQ +LPFP S +A +FDLIH ++WGPYK P+ G
Sbjct: 285 PHISSS-SKLTSCPICPLAKQTRLPFPQSPTRADNVFDLIHADVWGPYKFPTHDG 338
>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 96.7 bits (239), Expect(2) = 6e-35
Identities = 46/92 (50%), Positives = 62/92 (67%), Gaps = 2/92 (2%)
Frame = -3
Query: 392 IVNCGV--PIRYLRHVVPHIFLTIVDDFSRATWVYLLYDKKEVETMFMNFISMVDRQFDK 219
+++C V P R + FLTIVDD+SR WVYL+ DK E + +FI++V+RQFD
Sbjct: 573 LIHCDVWGPYRAPSYSGARYFLTIVDDYSRGVWVYLMTDKSETQKHLKDFIALVERQFDT 632
Query: 218 KVKVVRSDNRTEFFCLINYFVKHGILFETSCV 123
++K+VRSDN TEF C+ YF+ GI ETSCV
Sbjct: 633 EIKIVRSDNGTEFLCMREYFLHKGIAHETSCV 664
Score = 76.6 bits (187), Expect(2) = 6e-35
Identities = 33/40 (82%), Positives = 37/40 (92%)
Frame = -2
Query: 120 TPQQNGRVERKHRHILNVARALRFQGNLPIKFWGECVLAA 1
TP QNGRVERKHRHILN+ARALRFQ LPI+FWGEC+L+A
Sbjct: 666 TPHQNGRVERKHRHILNIARALRFQSYLPIQFWGECILSA 705
Score = 57.8 bits (138), Expect = 1e-06
Identities = 23/44 (52%), Positives = 30/44 (68%)
Frame = -2
Query: 477 CDVCHMAKQKKLPFPISQNKASAIFDLIHCELWGPYKIPSSCGA 346
CD C AKQ + FP+S N++ F LIHC++WGPY+ PS GA
Sbjct: 547 CDTCMRAKQTRDTFPLSDNRSMDSFQLIHCDVWGPYRAPSYSGA 590
>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1109
Score = 95.5 bits (236), Expect(2) = 1e-34
Identities = 46/92 (50%), Positives = 61/92 (66%), Gaps = 2/92 (2%)
Frame = -3
Query: 392 IVNCGV--PIRYLRHVVPHIFLTIVDDFSRATWVYLLYDKKEVETMFMNFISMVDRQFDK 219
+++C V P R + FLTIVDD+SR WVYL+ DK E + +FI++V+RQFD
Sbjct: 349 LIHCDVWGPYRTPSYSGARYFLTIVDDYSRGVWVYLMTDKSETQKHLKDFIALVERQFDT 408
Query: 218 KVKVVRSDNRTEFFCLINYFVKHGILFETSCV 123
++K VRSDN TEF C+ YF+ GI ETSCV
Sbjct: 409 EIKTVRSDNGTEFLCMREYFLHKGITHETSCV 440
Score = 76.6 bits (187), Expect(2) = 1e-34
Identities = 33/40 (82%), Positives = 37/40 (92%)
Frame = -2
Query: 120 TPQQNGRVERKHRHILNVARALRFQGNLPIKFWGECVLAA 1
TP QNGRVERKHRHILN+ARALRFQ LPI+FWGEC+L+A
Sbjct: 442 TPHQNGRVERKHRHILNIARALRFQSYLPIQFWGECILSA 481
Score = 57.8 bits (138), Expect = 1e-06
Identities = 23/44 (52%), Positives = 30/44 (68%)
Frame = -2
Query: 477 CDVCHMAKQKKLPFPISQNKASAIFDLIHCELWGPYKIPSSCGA 346
CD C AKQ + FP+S N++ F LIHC++WGPY+ PS GA
Sbjct: 323 CDTCMRAKQTRDTFPLSDNRSMDSFQLIHCDVWGPYRTPSYSGA 366
>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
gi|7269049|emb|CAB79159.1| LTR retrotransposon like
protein [Arabidopsis thaliana]
Length = 1109
Score = 94.4 bits (233), Expect(2) = 3e-34
Identities = 45/92 (48%), Positives = 61/92 (66%), Gaps = 2/92 (2%)
Frame = -3
Query: 392 IVNCGV--PIRYLRHVVPHIFLTIVDDFSRATWVYLLYDKKEVETMFMNFISMVDRQFDK 219
+++C V P R + FLTIVDD+SR WVYL+ DK E + +F+++V+RQFD
Sbjct: 349 LIHCDVWGPYRTPSYSGARYFLTIVDDYSRGVWVYLMTDKSETQKHLKDFMALVERQFDT 408
Query: 218 KVKVVRSDNRTEFFCLINYFVKHGILFETSCV 123
++K VRSDN TEF C+ YF+ GI ETSCV
Sbjct: 409 EIKTVRSDNGTEFLCMREYFLHKGIAHETSCV 440
Score = 76.6 bits (187), Expect(2) = 3e-34
Identities = 33/40 (82%), Positives = 37/40 (92%)
Frame = -2
Query: 120 TPQQNGRVERKHRHILNVARALRFQGNLPIKFWGECVLAA 1
TP QNGRVERKHRHILN+ARALRFQ LPI+FWGEC+L+A
Sbjct: 442 TPHQNGRVERKHRHILNIARALRFQSYLPIQFWGECILSA 481
Score = 55.8 bits (133), Expect = 6e-06
Identities = 22/44 (50%), Positives = 29/44 (65%)
Frame = -2
Query: 477 CDVCHMAKQKKLPFPISQNKASAIFDLIHCELWGPYKIPSSCGA 346
CD C AKQ + FP+ N++ F LIHC++WGPY+ PS GA
Sbjct: 323 CDTCMRAKQTRDTFPLRDNRSMDSFQLIHCDVWGPYRTPSYSGA 366
>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 94.4 bits (233), Expect(2) = 5e-34
Identities = 45/93 (48%), Positives = 59/93 (63%), Gaps = 3/93 (3%)
Frame = -3
Query: 374 PIRYLRHVVPHIFLTIVDDFSRATWVYLLYDKKEVETMFMNFISMVDRQFDKKVKVVRSD 195
P R H FLTI+DD+SR W+YLL DK E NF +M DRQF+ K+K VRSD
Sbjct: 457 PYRTPSHTGARYFLTIIDDYSRGVWLYLLNDKSEAPCHLKNFFAMTDRQFNVKIKTVRSD 516
Query: 194 NRTEFFCLINYFVKHGILFETSCV---ERHNKM 105
N TEF CL +F + G++ E SCV ER++++
Sbjct: 517 NGTEFLCLTKFFQEQGVIHERSCVATPERNDRV 549
Score = 75.9 bits (185), Expect(2) = 5e-34
Identities = 33/40 (82%), Positives = 37/40 (92%)
Frame = -2
Query: 120 TPQQNGRVERKHRHILNVARALRFQGNLPIKFWGECVLAA 1
TP++N RVERKHRH+LNVARALRFQ NLPI+FWGECVL A
Sbjct: 542 TPERNDRVERKHRHLLNVARALRFQANLPIQFWGECVLTA 581
Score = 67.4 bits (163), Expect = 2e-09
Identities = 29/52 (55%), Positives = 36/52 (69%)
Frame = -2
Query: 501 SHIHQFDSCDVCHMAKQKKLPFPISQNKASAIFDLIHCELWGPYKIPSSCGA 346
S H +CDVCH AKQ + FP+S NK IF+LI+C+LWGPY+ PS GA
Sbjct: 415 SSTHLNKACDVCHRAKQTRNSFPLSINKTLRIFELIYCDLWGPYRTPSHTGA 466
>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1454
Score = 69.7 bits (169), Expect(3) = 1e-33
Identities = 38/73 (52%), Positives = 47/73 (64%)
Frame = -3
Query: 338 FLTIVDDFSRATWVYLLYDKKEVETMFMNFISMVDRQFDKKVKVVRSDNRTEFFCLINYF 159
FLTIVDD SRATW+YLL K EV T+F FI V+ Q+ KVK VRSDN E +++
Sbjct: 636 FLTIVDDHSRATWMYLLKTKSEVLTVFPAFIQQVENQYKVKVKAVRSDNAPE-LKFTSFY 694
Query: 158 VKHGILFETSCVE 120
+ GI+ SC E
Sbjct: 695 AEKGIVSFHSCPE 707
Score = 63.5 bits (153), Expect(3) = 1e-33
Identities = 27/40 (67%), Positives = 32/40 (80%)
Frame = -2
Query: 120 TPQQNGRVERKHRHILNVARALRFQGNLPIKFWGECVLAA 1
TP+QN VERKH+HILNVARAL FQ +P+ WG+CVL A
Sbjct: 708 TPEQNSVVERKHQHILNVARALMFQSQVPLSLWGDCVLTA 747
Score = 56.2 bits (134), Expect(3) = 1e-33
Identities = 21/40 (52%), Positives = 28/40 (70%)
Frame = -2
Query: 483 DSCDVCHMAKQKKLPFPISQNKASAIFDLIHCELWGPYKI 364
D C VCH+AKQ+KL FP S IFDL+H ++WGP+ +
Sbjct: 588 DFCHVCHLAKQRKLSFPTSNKVCKEIFDLLHIDVWGPFSV 627
>emb|CAN63908.1| hypothetical protein VITISV_044218 [Vitis vinifera]
Length = 1236
Score = 70.1 bits (170), Expect(3) = 1e-33
Identities = 31/72 (43%), Positives = 45/72 (62%)
Frame = -3
Query: 338 FLTIVDDFSRATWVYLLYDKKEVETMFMNFISMVDRQFDKKVKVVRSDNRTEFFCLINYF 159
FLTIVDD+SR TWV+ ++ K E + + +NF S V QF + +R DN EFF + +F
Sbjct: 576 FLTIVDDYSRFTWVFFMHHKSETQHLLVNFFSFVQTQFHVSIANIRVDNGGEFFSMREFF 635
Query: 158 VKHGILFETSCV 123
+ G ++ SCV
Sbjct: 636 KQKGTTYQHSCV 647
Score = 60.1 bits (144), Expect(3) = 1e-33
Identities = 24/46 (52%), Positives = 34/46 (73%)
Frame = -2
Query: 483 DSCDVCHMAKQKKLPFPISQNKASAIFDLIHCELWGPYKIPSSCGA 346
++CDVC +AKQ++LPF +S + F+LIHC++WGPYKI S A
Sbjct: 528 NACDVCALAKQRRLPFSVSSISSVRPFELIHCDIWGPYKIASLSSA 573
Score = 58.9 bits (141), Expect(3) = 1e-33
Identities = 26/37 (70%), Positives = 28/37 (75%)
Frame = -2
Query: 120 TPQQNGRVERKHRHILNVARALRFQGNLPIKFWGECV 10
TPQQNG VERKH HIL ARA FQ +LP+ FW ECV
Sbjct: 649 TPQQNGVVERKHCHILESARAFHFQAHLPLPFWAECV 685