BLASTX nr result
ID: Rehmannia24_contig00029982
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00029982
(311 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera] 129 5e-28
ref|XP_006572940.1| PREDICTED: probable RNA-dependent RNA polyme... 127 2e-27
emb|CBI28010.3| unnamed protein product [Vitis vinifera] 124 1e-26
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme... 124 1e-26
ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citr... 120 2e-25
ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citr... 120 2e-25
ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polyme... 119 3e-25
ref|XP_004288887.1| PREDICTED: probable RNA-dependent RNA polyme... 119 4e-25
ref|XP_004251631.1| PREDICTED: probable RNA-dependent RNA polyme... 119 4e-25
ref|XP_004513037.1| PREDICTED: probable RNA-dependent RNA polyme... 119 5e-25
ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polyme... 118 7e-25
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ... 118 9e-25
ref|XP_002883965.1| RNA-dependent RNA polymerase family protein ... 116 4e-24
gb|ESW24973.1| hypothetical protein PHAVU_004G1764001g, partial ... 115 8e-24
ref|NP_179583.3| probable RNA-dependent RNA polymerase 5 [Arabid... 114 2e-23
ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Popu... 113 2e-23
ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Popu... 113 2e-23
ref|NP_179581.2| probable RNA-dependent RNA polymerase 3 [Arabid... 113 3e-23
gb|AAC62125.1| hypothetical protein [Arabidopsis thaliana] 113 3e-23
ref|XP_006408907.1| hypothetical protein EUTSA_v10001896mg [Eutr... 111 9e-23
>emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera]
Length = 1202
Score = 129 bits (323), Expect = 5e-28
Identities = 64/87 (73%), Positives = 73/87 (83%)
Frame = +2
Query: 50 EPPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDEKVPKEETFNSLEIVA 229
EPPLL+QCRLF+ G AVKGTLL+NRKL P TIQIRPSMIKVE D K+ +T NS+EI
Sbjct: 722 EPPLLIQCRLFNNGCAVKGTLLLNRKLPPRTIQIRPSMIKVETDPKLSDTQTVNSVEING 781
Query: 230 ISNRPRRNYLSKYLIALLSYGGVPQEF 310
SN+PRR+YLSKYLIALLSYGGVP E+
Sbjct: 782 TSNQPRRSYLSKYLIALLSYGGVPNEY 808
>ref|XP_006572940.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Glycine
max]
Length = 988
Score = 127 bits (318), Expect = 2e-27
Identities = 62/87 (71%), Positives = 74/87 (85%)
Frame = +2
Query: 50 EPPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDEKVPKEETFNSLEIVA 229
EPPLL+QCRLFH G+A+KGTLLVNRKL P TIQ+RPSMIKVE+D V ++ NSLE+V
Sbjct: 444 EPPLLIQCRLFHMGHAIKGTLLVNRKLPPRTIQVRPSMIKVEKDPSV-HMQSINSLEVVT 502
Query: 230 ISNRPRRNYLSKYLIALLSYGGVPQEF 310
SN+P+R YLSK+LIALLS+GGVP EF
Sbjct: 503 TSNKPKRGYLSKHLIALLSFGGVPNEF 529
>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
Length = 929
Score = 124 bits (311), Expect = 1e-26
Identities = 62/85 (72%), Positives = 71/85 (83%)
Frame = +2
Query: 56 PLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDEKVPKEETFNSLEIVAIS 235
PLL+QCRLF+ G AVKGTLL+NRKL P TIQIRPSMIKVE D K+ +T NS+EI S
Sbjct: 388 PLLIQCRLFNNGCAVKGTLLLNRKLPPRTIQIRPSMIKVETDPKLSDTQTVNSVEINGTS 447
Query: 236 NRPRRNYLSKYLIALLSYGGVPQEF 310
N+PRR+YLSKYLIALLSYGGVP E+
Sbjct: 448 NQPRRSYLSKYLIALLSYGGVPNEY 472
>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
vinifera]
Length = 943
Score = 124 bits (311), Expect = 1e-26
Identities = 62/85 (72%), Positives = 71/85 (83%)
Frame = +2
Query: 56 PLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDEKVPKEETFNSLEIVAIS 235
PLL+QCRLF+ G AVKGTLL+NRKL P TIQIRPSMIKVE D K+ +T NS+EI S
Sbjct: 402 PLLIQCRLFNNGCAVKGTLLLNRKLPPRTIQIRPSMIKVETDPKLSDTQTVNSVEINGTS 461
Query: 236 NRPRRNYLSKYLIALLSYGGVPQEF 310
N+PRR+YLSKYLIALLSYGGVP E+
Sbjct: 462 NQPRRSYLSKYLIALLSYGGVPNEY 486
>ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843311|ref|XP_006475557.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X2 [Citrus
sinensis] gi|557554498|gb|ESR64512.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1013
Score = 120 bits (301), Expect = 2e-25
Identities = 60/87 (68%), Positives = 71/87 (81%)
Frame = +2
Query: 50 EPPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDEKVPKEETFNSLEIVA 229
EPPLLMQ RLF+ G AVKGTLL+N+KL P TIQIRPSMIKV+ D + +TFNSLE+V
Sbjct: 467 EPPLLMQVRLFYNGTAVKGTLLLNKKLPPQTIQIRPSMIKVKADRDLSDGQTFNSLEVVK 526
Query: 230 ISNRPRRNYLSKYLIALLSYGGVPQEF 310
SN+PR+ YLS+ LIALLSYGGVP+ F
Sbjct: 527 TSNQPRKTYLSRNLIALLSYGGVPEIF 553
>ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843309|ref|XP_006475556.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X1 [Citrus
sinensis] gi|557554497|gb|ESR64511.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1015
Score = 120 bits (301), Expect = 2e-25
Identities = 60/87 (68%), Positives = 71/87 (81%)
Frame = +2
Query: 50 EPPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDEKVPKEETFNSLEIVA 229
EPPLLMQ RLF+ G AVKGTLL+N+KL P TIQIRPSMIKV+ D + +TFNSLE+V
Sbjct: 469 EPPLLMQVRLFYNGTAVKGTLLLNKKLPPQTIQIRPSMIKVKADRDLSDGQTFNSLEVVK 528
Query: 230 ISNRPRRNYLSKYLIALLSYGGVPQEF 310
SN+PR+ YLS+ LIALLSYGGVP+ F
Sbjct: 529 TSNQPRKTYLSRNLIALLSYGGVPEIF 555
>ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
tuberosum]
Length = 1110
Score = 119 bits (299), Expect = 3e-25
Identities = 62/102 (60%), Positives = 77/102 (75%)
Frame = +2
Query: 5 GDAACQKRGAKARNKEPPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDE 184
G+ + + A+ ++ EPPLLMQCRLF+ G AVKGTLLVNRKL TIQIRPSMIKVE D
Sbjct: 538 GENSSELGEAEFQSGEPPLLMQCRLFYNGLAVKGTLLVNRKLPRRTIQIRPSMIKVEADP 597
Query: 185 KVPKEETFNSLEIVAISNRPRRNYLSKYLIALLSYGGVPQEF 310
++ + + FNSLEI S +PR YLS+ LIALL+YGGVP E+
Sbjct: 598 RLSRAQMFNSLEINTPSLKPRNTYLSRTLIALLTYGGVPVEY 639
>ref|XP_004288887.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Fragaria
vesca subsp. vesca]
Length = 1405
Score = 119 bits (298), Expect = 4e-25
Identities = 59/96 (61%), Positives = 71/96 (73%)
Frame = +2
Query: 23 KRGAKARNKEPPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDEKVPKEE 202
K A R +EPPLL+QCRLFH G A KGTLLVN+KL+P IQIRPSM+KV+ D + +
Sbjct: 855 KNRAGLRTEEPPLLIQCRLFHNGSASKGTLLVNKKLQPNRIQIRPSMLKVKTDPVISNNQ 914
Query: 203 TFNSLEIVAISNRPRRNYLSKYLIALLSYGGVPQEF 310
T NSLEIV S PR +LS+ LIALL +GGVP+EF
Sbjct: 915 TLNSLEIVGTSTPPRNTHLSRILIALLVHGGVPEEF 950
>ref|XP_004251631.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
lycopersicum]
Length = 759
Score = 119 bits (298), Expect = 4e-25
Identities = 62/102 (60%), Positives = 76/102 (74%)
Frame = +2
Query: 5 GDAACQKRGAKARNKEPPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDE 184
G+ + + A+ ++ EPPLLMQCRLF+ G AVKGTLLVNRKL TIQIRPSMIKVE D
Sbjct: 482 GENSSELGEAEFQSGEPPLLMQCRLFYNGLAVKGTLLVNRKLPQRTIQIRPSMIKVEADP 541
Query: 185 KVPKEETFNSLEIVAISNRPRRNYLSKYLIALLSYGGVPQEF 310
++ + FNSLEI S +PR YLS+ LIALL+YGGVP E+
Sbjct: 542 RLSRAHMFNSLEINTPSLKPRNTYLSRTLIALLTYGGVPVEY 583
>ref|XP_004513037.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cicer
arietinum]
Length = 997
Score = 119 bits (297), Expect = 5e-25
Identities = 61/102 (59%), Positives = 74/102 (72%)
Frame = +2
Query: 5 GDAACQKRGAKARNKEPPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDE 184
G+AA K +PPLL+QCRLFH G A+KGTLLVN+KL P TIQ+RPSMIKV D
Sbjct: 445 GEAALSKH-------QPPLLIQCRLFHMGCAMKGTLLVNKKLSPSTIQVRPSMIKVMTDP 497
Query: 185 KVPKEETFNSLEIVAISNRPRRNYLSKYLIALLSYGGVPQEF 310
+ ++ NS+E+V S++P R YLSKYLIALLSYG VP EF
Sbjct: 498 SLSNIQSLNSMEVVNTSHKPNRAYLSKYLIALLSYGRVPNEF 539
>ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
tuberosum]
Length = 911
Score = 118 bits (296), Expect = 7e-25
Identities = 61/101 (60%), Positives = 75/101 (74%)
Frame = +2
Query: 8 DAACQKRGAKARNKEPPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDEK 187
D ++R + + N+EPPLLMQCRLF G AVKGT LVNRK+ I IRPSM+KVE D
Sbjct: 456 DLDAERRESVSWNREPPLLMQCRLFFNGCAVKGTFLVNRKIGSRKIHIRPSMVKVEIDPA 515
Query: 188 VPKEETFNSLEIVAISNRPRRNYLSKYLIALLSYGGVPQEF 310
+ TF+SLEIVAIS+RP + YLSK LI+LLSYGGV +E+
Sbjct: 516 ISSIPTFDSLEIVAISHRPNKAYLSKNLISLLSYGGVQKEY 556
>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
RNA polymerase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 981
Score = 118 bits (295), Expect = 9e-25
Identities = 56/92 (60%), Positives = 72/92 (78%)
Frame = +2
Query: 35 KARNKEPPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDEKVPKEETFNS 214
+A N++PPLL+Q R+F+ GYAVKGT L+N+KL P T+Q+RPSMIKV +D + TFN+
Sbjct: 434 EACNQDPPLLIQFRMFYDGYAVKGTFLLNKKLCPRTVQVRPSMIKVSKDPSLSNFSTFNA 493
Query: 215 LEIVAISNRPRRNYLSKYLIALLSYGGVPQEF 310
LE+V SN PRR LSK L+ALLSYGG+P EF
Sbjct: 494 LEVVTTSNPPRRTKLSKNLVALLSYGGIPNEF 525
>ref|XP_002883965.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
subsp. lyrata] gi|297329805|gb|EFH60224.1| RNA-dependent
RNA polymerase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 934
Score = 116 bits (290), Expect = 4e-24
Identities = 55/88 (62%), Positives = 67/88 (76%)
Frame = +2
Query: 47 KEPPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDEKVPKEETFNSLEIV 226
+EPPLL+Q R+FH GYAVKGT L N+KL P T+Q+RPSMIKV D+ + TFNSLE+V
Sbjct: 472 QEPPLLIQFRMFHNGYAVKGTFLTNKKLPPWTVQVRPSMIKVNEDQTMSNFSTFNSLEVV 531
Query: 227 AISNRPRRNYLSKYLIALLSYGGVPQEF 310
SN PR LS+ L+ALLSYGGVP +F
Sbjct: 532 TTSNPPRNARLSRNLVALLSYGGVPNDF 559
>gb|ESW24973.1| hypothetical protein PHAVU_004G1764001g, partial [Phaseolus
vulgaris]
Length = 689
Score = 115 bits (287), Expect = 8e-24
Identities = 62/101 (61%), Positives = 73/101 (72%), Gaps = 3/101 (2%)
Frame = +2
Query: 17 CQKRGA---KARNKEPPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDEK 187
C++ G K +PPLL+QCRLFH G A+KGTLLVN+KL P TI +RPSMIKVE D
Sbjct: 416 CKEMGETELKLTTHQPPLLIQCRLFHMGSAIKGTLLVNKKLPPRTIHVRPSMIKVETDLS 475
Query: 188 VPKEETFNSLEIVAISNRPRRNYLSKYLIALLSYGGVPQEF 310
+ ++ NSLEIV S +P R YLSK LIALLSYGGVP EF
Sbjct: 476 L-NMQSINSLEIVNTSIKPNRTYLSKNLIALLSYGGVPNEF 515
>ref|NP_179583.3| probable RNA-dependent RNA polymerase 5 [Arabidopsis thaliana]
gi|322967572|sp|O82188.2|RDR5_ARATH RecName:
Full=Probable RNA-dependent RNA polymerase 5;
Short=AtRDRP5; AltName: Full=RNA-directed RNA polymerase
5 gi|330251850|gb|AEC06944.1| probable RNA-dependent RNA
polymerase 5 [Arabidopsis thaliana]
Length = 977
Score = 114 bits (284), Expect = 2e-23
Identities = 53/88 (60%), Positives = 69/88 (78%)
Frame = +2
Query: 47 KEPPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDEKVPKEETFNSLEIV 226
++PPLL+Q R+F+ GYAVKGT L+N+KL P T+Q+RPSMIKV +D + TFN+LE+V
Sbjct: 434 QDPPLLIQFRMFYDGYAVKGTFLLNKKLCPRTVQVRPSMIKVSKDPSLSNFSTFNALEVV 493
Query: 227 AISNRPRRNYLSKYLIALLSYGGVPQEF 310
SN P+R LSK L+ALLSYGG+P EF
Sbjct: 494 TTSNPPKRTKLSKNLVALLSYGGIPNEF 521
>ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
gi|550334280|gb|ERP58267.1| hypothetical protein
POPTR_0007s06560g [Populus trichocarpa]
Length = 877
Score = 113 bits (283), Expect = 2e-23
Identities = 58/92 (63%), Positives = 71/92 (77%)
Frame = +2
Query: 35 KARNKEPPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDEKVPKEETFNS 214
+ RN +PPLL+Q RLF+ G AVKGT LVN+KL T+ IRPSMIKVE D K+ + NS
Sbjct: 328 ECRNGDPPLLIQFRLFNNGRAVKGTFLVNKKLTHQTLHIRPSMIKVETDPKLSSTFSKNS 387
Query: 215 LEIVAISNRPRRNYLSKYLIALLSYGGVPQEF 310
LEIV S+RP++ +LSK LIALLSYGGVP+EF
Sbjct: 388 LEIVGTSSRPKKTFLSKNLIALLSYGGVPEEF 419
>ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
gi|550334279|gb|ERP58266.1| hypothetical protein
POPTR_0007s06560g [Populus trichocarpa]
Length = 899
Score = 113 bits (283), Expect = 2e-23
Identities = 58/92 (63%), Positives = 71/92 (77%)
Frame = +2
Query: 35 KARNKEPPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDEKVPKEETFNS 214
+ RN +PPLL+Q RLF+ G AVKGT LVN+KL T+ IRPSMIKVE D K+ + NS
Sbjct: 350 ECRNGDPPLLIQFRLFNNGRAVKGTFLVNKKLTHQTLHIRPSMIKVETDPKLSSTFSKNS 409
Query: 215 LEIVAISNRPRRNYLSKYLIALLSYGGVPQEF 310
LEIV S+RP++ +LSK LIALLSYGGVP+EF
Sbjct: 410 LEIVGTSSRPKKTFLSKNLIALLSYGGVPEEF 441
>ref|NP_179581.2| probable RNA-dependent RNA polymerase 3 [Arabidopsis thaliana]
gi|322967566|sp|O82190.2|RDR3_ARATH RecName:
Full=Probable RNA-dependent RNA polymerase 3;
Short=AtRDRP3; AltName: Full=RNA-directed RNA polymerase
3 gi|330251848|gb|AEC06942.1| probable RNA-dependent RNA
polymerase 3 [Arabidopsis thaliana]
Length = 992
Score = 113 bits (282), Expect = 3e-23
Identities = 54/88 (61%), Positives = 67/88 (76%)
Frame = +2
Query: 47 KEPPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDEKVPKEETFNSLEIV 226
+EPPLL+Q R+F+ GYAVKGT L N+KL P T+Q+RPSMIKV D + TFNSLE+V
Sbjct: 447 QEPPLLIQFRIFYNGYAVKGTFLTNKKLPPRTVQVRPSMIKVYEDRTLSNLSTFNSLEVV 506
Query: 227 AISNRPRRNYLSKYLIALLSYGGVPQEF 310
SN PR+ LS+ L+ALLSYGGVP +F
Sbjct: 507 TTSNPPRKARLSRNLVALLSYGGVPNDF 534
>gb|AAC62125.1| hypothetical protein [Arabidopsis thaliana]
Length = 966
Score = 113 bits (282), Expect = 3e-23
Identities = 54/88 (61%), Positives = 67/88 (76%)
Frame = +2
Query: 47 KEPPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDEKVPKEETFNSLEIV 226
+EPPLL+Q R+F+ GYAVKGT L N+KL P T+Q+RPSMIKV D + TFNSLE+V
Sbjct: 421 QEPPLLIQFRIFYNGYAVKGTFLTNKKLPPRTVQVRPSMIKVYEDRTLSNLSTFNSLEVV 480
Query: 227 AISNRPRRNYLSKYLIALLSYGGVPQEF 310
SN PR+ LS+ L+ALLSYGGVP +F
Sbjct: 481 TTSNPPRKARLSRNLVALLSYGGVPNDF 508
>ref|XP_006408907.1| hypothetical protein EUTSA_v10001896mg [Eutrema salsugineum]
gi|557110063|gb|ESQ50360.1| hypothetical protein
EUTSA_v10001896mg [Eutrema salsugineum]
Length = 988
Score = 111 bits (278), Expect = 9e-23
Identities = 54/88 (61%), Positives = 67/88 (76%)
Frame = +2
Query: 47 KEPPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDEKVPKEETFNSLEIV 226
KEPPLL+Q R+F+ GYAVKGT L+N+KL T+Q+RPSMIKV D+ + TFNSLE+V
Sbjct: 428 KEPPLLIQFRMFYDGYAVKGTFLLNKKLPDRTVQVRPSMIKVYNDQTLSNFSTFNSLEVV 487
Query: 227 AISNRPRRNYLSKYLIALLSYGGVPQEF 310
SN P R LS+ L+ALLSYGGVP +F
Sbjct: 488 NTSNPPNRTKLSRNLVALLSYGGVPNDF 515