BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00029976
         (719 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006488245.1| PREDICTED: pentatricopeptide repeat-containi...   129   1e-27
ref|XP_006424739.1| hypothetical protein CICLE_v10030177mg [Citr...   128   2e-27
ref|XP_002303899.2| pentatricopeptide repeat-containing family p...   128   2e-27
gb|ESW04113.1| hypothetical protein PHAVU_011G068200g [Phaseolus...   126   6e-27
emb|CBI16200.3| unnamed protein product [Vitis vinifera]              122   2e-25
ref|XP_002281474.1| PREDICTED: pentatricopeptide repeat-containi...   122   2e-25
emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]   122   2e-25
ref|XP_004505902.1| PREDICTED: pentatricopeptide repeat-containi...   119   7e-25
gb|EXC35073.1| hypothetical protein L484_010855 [Morus notabilis]     119   1e-24
ref|XP_004251315.1| PREDICTED: pentatricopeptide repeat-containi...   118   2e-24
gb|EOY34160.1| Tetratricopeptide repeat-like superfamily protein...   117   3e-24
ref|XP_003540737.1| PREDICTED: pentatricopeptide repeat-containi...   115   1e-23
ref|XP_006363379.1| PREDICTED: pentatricopeptide repeat-containi...   114   2e-23
ref|XP_006363378.1| PREDICTED: pentatricopeptide repeat-containi...   114   2e-23
ref|XP_004295952.1| PREDICTED: pentatricopeptide repeat-containi...   114   4e-23
gb|EMJ08380.1| hypothetical protein PRUPE_ppa017156mg [Prunus pe...   114   4e-23
ref|XP_002531100.1| pentatricopeptide repeat-containing protein,...   114   4e-23
gb|EMJ09951.1| hypothetical protein PRUPE_ppa015993mg [Prunus pe...   110   3e-22
ref|NP_172253.1| pentatricopeptide repeat-containing protein [Ar...   109   1e-21
ref|XP_002892416.1| pentatricopeptide repeat-containing protein ...   107   5e-21

>ref|XP_006488245.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like [Citrus sinensis]
          Length = 477

 Score =  129 bits (323), Expect = 1e-27
 Identities = 59/103 (57%), Positives = 77/103 (74%)
 Frame = -1

Query: 719 VKGCEPNAATYRTVVDGFCRIEDFMGGLKVLNAMLNSNHFPRTETFRFLGIGLFRSGKID 540
           + GC+PNAATYRT+VDGF R+EDF G LKVLNAML S H PR ETF  L +GL + GK+D
Sbjct: 372 IGGCKPNAATYRTMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVD 431

Query: 539 EACFVLEEMKRRKMSLDRDSWEIIVREVCMDDGFVTDRLADII 411
           +ACFVLEEM++RKM  D  +WE +V + C+ DG     ++++I
Sbjct: 432 DACFVLEEMEKRKMRFDLKAWEGLVTDACIGDGNAGGLVSELI 474


>ref|XP_006424739.1| hypothetical protein CICLE_v10030177mg [Citrus clementina]
           gi|557526673|gb|ESR37979.1| hypothetical protein
           CICLE_v10030177mg [Citrus clementina]
          Length = 797

 Score =  128 bits (321), Expect = 2e-27
 Identities = 58/93 (62%), Positives = 72/93 (77%)
 Frame = -1

Query: 719 VKGCEPNAATYRTVVDGFCRIEDFMGGLKVLNAMLNSNHFPRTETFRFLGIGLFRSGKID 540
           + GC+PNAATYRT+VDGF R+EDF G LKVLNAML S H PR ETF  L +GL + GK+D
Sbjct: 370 IGGCKPNAATYRTMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVD 429

Query: 539 EACFVLEEMKRRKMSLDRDSWEIIVREVCMDDG 441
           +ACFVLEEM++RKM  D  +WE +V + C+ DG
Sbjct: 430 DACFVLEEMEKRKMRFDLKAWEGLVTDACIGDG 462


>ref|XP_002303899.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550343608|gb|EEE78878.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 463

 Score =  128 bits (321), Expect = 2e-27
 Identities = 62/105 (59%), Positives = 76/105 (72%), Gaps = 2/105 (1%)
 Frame = -1

Query: 719 VKGCEPNAATYRTVVDGFCRIEDFMGGLKVLNAMLNSNHFPRTETFRFLGIGLFRSGKID 540
           V GCE NAATYR +VDGFCR+ DF GGLKVLNAML S HFPR ETFR L +GL +SG +D
Sbjct: 354 VGGCEANAATYRMLVDGFCRVGDFEGGLKVLNAMLTSGHFPRVETFRSLVVGLVKSGNLD 413

Query: 539 EACFVLEEMKRRKMSLDRDSWEIIVREVCMDD--GFVTDRLADII 411
            ACFVLEEM++R+M    D WE +V E C  D  G V + + +++
Sbjct: 414 GACFVLEEMEKRQMMFCADDWEALVMESCRGDENGSVGEHVNELV 458


>gb|ESW04113.1| hypothetical protein PHAVU_011G068200g [Phaseolus vulgaris]
          Length = 447

 Score =  126 bits (317), Expect = 6e-27
 Identities = 60/99 (60%), Positives = 73/99 (73%)
 Frame = -1

Query: 719 VKGCEPNAATYRTVVDGFCRIEDFMGGLKVLNAMLNSNHFPRTETFRFLGIGLFRSGKID 540
           + GCEPNAATYR VVDG CRI DF  GL VLNAML S H+PR+ETF  L +GL +SG ID
Sbjct: 343 IGGCEPNAATYRMVVDGLCRIGDFETGLSVLNAMLTSRHWPRSETFNCLVVGLLKSGNID 402

Query: 539 EACFVLEEMKRRKMSLDRDSWEIIVREVCMDDGFVTDRL 423
            ACFVLEEM++RK+  D  SWE I++  C +D  V++ L
Sbjct: 403 GACFVLEEMEKRKVEFDLGSWETIIKFACSEDKGVSELL 441


>emb|CBI16200.3| unnamed protein product [Vitis vinifera]
          Length = 1093

 Score =  122 bits (305), Expect = 2e-25
 Identities = 56/92 (60%), Positives = 71/92 (77%)
 Frame = -1

Query: 719  VKGCEPNAATYRTVVDGFCRIEDFMGGLKVLNAMLNSNHFPRTETFRFLGIGLFRSGKID 540
            V GCEPNAATYR +VDGFC++EDF GGLKVL+AML   H PR E+F  L +GL ++GKID
Sbjct: 757  VGGCEPNAATYRMMVDGFCQVEDFEGGLKVLSAMLMCGHCPRLESFCDLVVGLLKNGKID 816

Query: 539  EACFVLEEMKRRKMSLDRDSWEIIVREVCMDD 444
             ACFVLEEM++RKM    ++WE +V++ C  D
Sbjct: 817  GACFVLEEMEKRKMRFHLEAWEALVKDACPGD 848


>ref|XP_002281474.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like [Vitis vinifera]
          Length = 501

 Score =  122 bits (305), Expect = 2e-25
 Identities = 56/92 (60%), Positives = 71/92 (77%)
 Frame = -1

Query: 719 VKGCEPNAATYRTVVDGFCRIEDFMGGLKVLNAMLNSNHFPRTETFRFLGIGLFRSGKID 540
           V GCEPNAATYR +VDGFC++EDF GGLKVL+AML   H PR E+F  L +GL ++GKID
Sbjct: 395 VGGCEPNAATYRMMVDGFCQVEDFEGGLKVLSAMLMCGHCPRLESFCDLVVGLLKNGKID 454

Query: 539 EACFVLEEMKRRKMSLDRDSWEIIVREVCMDD 444
            ACFVLEEM++RKM    ++WE +V++ C  D
Sbjct: 455 GACFVLEEMEKRKMRFHLEAWEALVKDACPGD 486


>emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]
          Length = 1051

 Score =  122 bits (305), Expect = 2e-25
 Identities = 56/92 (60%), Positives = 71/92 (77%)
 Frame = -1

Query: 719 VKGCEPNAATYRTVVDGFCRIEDFMGGLKVLNAMLNSNHFPRTETFRFLGIGLFRSGKID 540
           V GCEPNAATYR +VDGFC++EDF GGLKVL+AML   H PR E+F  L +GL ++GKID
Sbjct: 686 VGGCEPNAATYRMMVDGFCQVEDFEGGLKVLSAMLMCGHCPRLESFCDLVVGLLKNGKID 745

Query: 539 EACFVLEEMKRRKMSLDRDSWEIIVREVCMDD 444
            ACFVLEEM++RKM    ++WE +V++ C  D
Sbjct: 746 GACFVLEEMEKRKMRFHLEAWEALVKDACPGD 777


>ref|XP_004505902.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like [Cicer arietinum]
          Length = 452

 Score =  119 bits (299), Expect = 7e-25
 Identities = 55/105 (52%), Positives = 72/105 (68%)
 Frame = -1

Query: 719 VKGCEPNAATYRTVVDGFCRIEDFMGGLKVLNAMLNSNHFPRTETFRFLGIGLFRSGKID 540
           + GCEPNAATYR ++DG CR  DF  GL VLNAML S H PR++TF  L +GL +SG +D
Sbjct: 345 IGGCEPNAATYRMMLDGLCRSGDFEQGLNVLNAMLASRHCPRSDTFNCLVVGLLKSGNVD 404

Query: 539 EACFVLEEMKRRKMSLDRDSWEIIVREVCMDDGFVTDRLADIICS 405
             CFVLEEM++RK+  D +SWE +++  C +D      L +II S
Sbjct: 405 GGCFVLEEMEKRKVDFDLESWETVIKFACSEDDKAASGLMNIITS 449


>gb|EXC35073.1| hypothetical protein L484_010855 [Morus notabilis]
          Length = 461

 Score =  119 bits (297), Expect = 1e-24
 Identities = 57/101 (56%), Positives = 72/101 (71%), Gaps = 4/101 (3%)
 Frame = -1

Query: 719 VKGCEPNAATYRTVVDGFCRIEDFMGGLKVLNAMLNSNHFPRTETFRFLGIGLFRSGKID 540
           + GCEPNAATYR +VDGFC++ DF  GLKVLNAML S H PR E+FR L +GL + G ++
Sbjct: 356 IGGCEPNAATYRVMVDGFCQVGDFERGLKVLNAMLTSRHCPRLESFRCLIMGLVKCGNLE 415

Query: 539 EACFVLEEMKRRKMSLDRDSWEIIVREVC----MDDGFVTD 429
           +ACFVLEEM +RKM  D + W+ +V E C      DG VT+
Sbjct: 416 DACFVLEEMGKRKMQFDLEGWDALVVEACGRNSGADGLVTE 456


>ref|XP_004251315.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like [Solanum lycopersicum]
          Length = 473

 Score =  118 bits (296), Expect = 2e-24
 Identities = 56/103 (54%), Positives = 73/103 (70%)
 Frame = -1

Query: 719 VKGCEPNAATYRTVVDGFCRIEDFMGGLKVLNAMLNSNHFPRTETFRFLGIGLFRSGKID 540
           + GC P A TYR VVDGFC+  +F  GLKVLNAML S HFPR ET R L +GL   GK++
Sbjct: 370 IAGCCPIAITYRMVVDGFCKTGEFEEGLKVLNAMLMSRHFPRMETVRCLILGLLDKGKVE 429

Query: 539 EACFVLEEMKRRKMSLDRDSWEIIVREVCMDDGFVTDRLADII 411
           +ACFVLEEM++RK   + DSWE+IV++ C  D  V+  L +++
Sbjct: 430 DACFVLEEMEKRKKKFNFDSWEVIVKDSCTSDRSVSQLLDELV 472


>gb|EOY34160.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
          Length = 951

 Score =  117 bits (294), Expect = 3e-24
 Identities = 56/92 (60%), Positives = 65/92 (70%)
 Frame = -1

Query: 719  VKGCEPNAATYRTVVDGFCRIEDFMGGLKVLNAMLNSNHFPRTETFRFLGIGLFRSGKID 540
            VKGCEPNAATYR +VDGFC + D  G LKVLN M  S H PR ET   L  GL + GKID
Sbjct: 845  VKGCEPNAATYRMMVDGFCMVGDLEGALKVLNVMFTSGHCPRLETLCQLVTGLLKCGKID 904

Query: 539  EACFVLEEMKRRKMSLDRDSWEIIVREVCMDD 444
             ACFVLEEM++RKMS D ++W  +VR+ C  D
Sbjct: 905  GACFVLEEMEKRKMSFDLEAWGALVRDACGGD 936


>ref|XP_003540737.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like [Glycine max]
          Length = 449

 Score =  115 bits (289), Expect = 1e-23
 Identities = 52/92 (56%), Positives = 67/92 (72%)
 Frame = -1

Query: 719 VKGCEPNAATYRTVVDGFCRIEDFMGGLKVLNAMLNSNHFPRTETFRFLGIGLFRSGKID 540
           + GC PNAATYR VVDG C+I DF   L VLNAML S H PR+ETF  + +GL +SG ID
Sbjct: 343 IGGCVPNAATYRMVVDGLCQIGDFEVALSVLNAMLTSRHCPRSETFNCMVVGLLKSGNID 402

Query: 539 EACFVLEEMKRRKMSLDRDSWEIIVREVCMDD 444
            +CFVLEEM++RK+  D +SWE I++  C ++
Sbjct: 403 GSCFVLEEMEKRKLEFDLESWETIIKSACSEN 434


>ref|XP_006363379.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like isoform X2 [Solanum tuberosum]
          Length = 492

 Score =  114 bits (286), Expect = 2e-23
 Identities = 54/92 (58%), Positives = 66/92 (71%)
 Frame = -1

Query: 719 VKGCEPNAATYRTVVDGFCRIEDFMGGLKVLNAMLNSNHFPRTETFRFLGIGLFRSGKID 540
           + GC P A TYR VVDGFC+  +F  GLKVLNAML S HFPR ET R L +GL   GK++
Sbjct: 367 IAGCYPIAITYRMVVDGFCKTGEFEEGLKVLNAMLMSRHFPRMETVRCLILGLLDKGKVE 426

Query: 539 EACFVLEEMKRRKMSLDRDSWEIIVREVCMDD 444
           +ACFVLEEM++RK   + DSWE IV++ C  D
Sbjct: 427 DACFVLEEMEKRKKKFNFDSWEAIVKDSCTSD 458


>ref|XP_006363378.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like isoform X1 [Solanum tuberosum]
          Length = 506

 Score =  114 bits (286), Expect = 2e-23
 Identities = 54/92 (58%), Positives = 66/92 (71%)
 Frame = -1

Query: 719 VKGCEPNAATYRTVVDGFCRIEDFMGGLKVLNAMLNSNHFPRTETFRFLGIGLFRSGKID 540
           + GC P A TYR VVDGFC+  +F  GLKVLNAML S HFPR ET R L +GL   GK++
Sbjct: 367 IAGCYPIAITYRMVVDGFCKTGEFEEGLKVLNAMLMSRHFPRMETVRCLILGLLDKGKVE 426

Query: 539 EACFVLEEMKRRKMSLDRDSWEIIVREVCMDD 444
           +ACFVLEEM++RK   + DSWE IV++ C  D
Sbjct: 427 DACFVLEEMEKRKKKFNFDSWEAIVKDSCTSD 458


>ref|XP_004295952.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 468

 Score =  114 bits (284), Expect = 4e-23
 Identities = 57/103 (55%), Positives = 67/103 (65%)
 Frame = -1

Query: 719 VKGCEPNAATYRTVVDGFCRIEDFMGGLKVLNAMLNSNHFPRTETFRFLGIGLFRSGKID 540
           V G EPNAATYR +VDGFC+ EDF GGLKVL AML S H PR ETF  L  GL + G +D
Sbjct: 363 VGGFEPNAATYRMMVDGFCQTEDFEGGLKVLIAMLTSKHCPRLETFERLVTGLLKCGNVD 422

Query: 539 EACFVLEEMKRRKMSLDRDSWEIIVREVCMDDGFVTDRLADII 411
            ACFVLEEM+ R + L  D WE  V   C +D    D + ++I
Sbjct: 423 GACFVLEEMENRNLELCCDVWEAPVVAACGEDSIAGDTMTEVI 465


>gb|EMJ08380.1| hypothetical protein PRUPE_ppa017156mg [Prunus persica]
          Length = 727

 Score =  114 bits (284), Expect = 4e-23
 Identities = 55/103 (53%), Positives = 72/103 (69%)
 Frame = -1

Query: 719 VKGCEPNAATYRTVVDGFCRIEDFMGGLKVLNAMLNSNHFPRTETFRFLGIGLFRSGKID 540
           V GC PNAATYR +VDGFC+I+DF GGLKVL AML S H PR ETF  L  GL + GKID
Sbjct: 375 VGGCVPNAATYRMMVDGFCQIDDFEGGLKVLIAMLTSRHCPRLETFECLVTGLVKCGKID 434

Query: 539 EACFVLEEMKRRKMSLDRDSWEIIVREVCMDDGFVTDRLADII 411
           +AC VLEEM++R M    ++WE +V + C ++    + + ++I
Sbjct: 435 DACVVLEEMEKRNMQFCFEAWEALVVDACGENVVAGEVVTELI 477


>ref|XP_002531100.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529296|gb|EEF31265.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 483

 Score =  114 bits (284), Expect = 4e-23
 Identities = 54/91 (59%), Positives = 66/91 (72%)
 Frame = -1

Query: 719 VKGCEPNAATYRTVVDGFCRIEDFMGGLKVLNAMLNSNHFPRTETFRFLGIGLFRSGKID 540
           + GCE NAATYR + DGFC++ +F  GLKVLNAML S H PR ETF    +GL +SG ID
Sbjct: 353 IGGCEANAATYRMLADGFCQVGEFEEGLKVLNAMLVSRHAPRIETFNCFVVGLMKSGSID 412

Query: 539 EACFVLEEMKRRKMSLDRDSWEIIVREVCMD 447
            A FVLEEM++RKM+LD D WE +VR  C +
Sbjct: 413 GAFFVLEEMEKRKMALDSDGWEALVRCCCSE 443


>gb|EMJ09951.1| hypothetical protein PRUPE_ppa015993mg [Prunus persica]
          Length = 714

 Score =  110 bits (276), Expect = 3e-22
 Identities = 55/103 (53%), Positives = 71/103 (68%)
 Frame = -1

Query: 719 VKGCEPNAATYRTVVDGFCRIEDFMGGLKVLNAMLNSNHFPRTETFRFLGIGLFRSGKID 540
           V GC PNAATYR +VDGFC+IEDF GGLKVL AML S H PR ETF  L  GL + GKID
Sbjct: 362 VGGCVPNAATYRMMVDGFCQIEDFEGGLKVLIAMLTSRHCPRLETFECLVTGLVKCGKID 421

Query: 539 EACFVLEEMKRRKMSLDRDSWEIIVREVCMDDGFVTDRLADII 411
           +A  VLEEM++R M    ++WE +V + C ++    + + ++I
Sbjct: 422 DAFVVLEEMEKRNMQFCFEAWEALVVDACGENVVAGEVVTELI 464


>ref|NP_172253.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75180186|sp|Q9LQQ1.1|PPR20_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g07740, mitochondrial; Flags: Precursor
           gi|8439893|gb|AAF75079.1|AC007583_15 It contains PPR
           repeats PF|01535 [Arabidopsis thaliana]
           gi|14596021|gb|AAK68738.1| Unknown protein [Arabidopsis
           thaliana] gi|31376389|gb|AAP49521.1| At1g07730
           [Arabidopsis thaliana] gi|51970836|dbj|BAD44110.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332190050|gb|AEE28171.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 459

 Score =  109 bits (272), Expect = 1e-21
 Identities = 51/104 (49%), Positives = 72/104 (69%), Gaps = 1/104 (0%)
 Frame = -1

Query: 719 VKGCEPNAATYRTVVDGFCRIEDFMGGLKVLNAMLNSNHFPRTETFRFLGIGLFRSGKID 540
           +KGC+PNAATYR ++DGFCRIEDF  GL VLNAML S H P   TF  +  GL + G +D
Sbjct: 354 MKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLD 413

Query: 539 EACFVLEEMKRRKMSLDRDSWEIIVREVCMDDGFV-TDRLADII 411
            ACFVLE M ++ +S    +W+ ++ ++C+ DG V  + L+++I
Sbjct: 414 HACFVLEVMGKKNLSFGSGAWQNLLSDLCIKDGGVYCEALSEVI 457


>ref|XP_002892416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297338258|gb|EFH68675.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 459

 Score =  107 bits (266), Expect = 5e-21
 Identities = 49/93 (52%), Positives = 65/93 (69%)
 Frame = -1

Query: 719 VKGCEPNAATYRTVVDGFCRIEDFMGGLKVLNAMLNSNHFPRTETFRFLGIGLFRSGKID 540
           +KGC+PNAATYR +VDGFCRI DF  GL VLNAML S H P   TF  +  GL + G +D
Sbjct: 354 MKGCKPNAATYRMIVDGFCRIGDFDSGLNVLNAMLASRHSPTPATFVRMVSGLIKGGNLD 413

Query: 539 EACFVLEEMKRRKMSLDRDSWEIIVREVCMDDG 441
            ACFVLE M ++K+S    +W+ ++ ++C+ DG
Sbjct: 414 HACFVLEVMGKKKLSFGYSAWQNLLCDLCIKDG 446