BLASTX nr result
ID: Rehmannia24_contig00029781
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00029781
(425 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN83839.1| hypothetical protein VITISV_023230 [Vitis vinifera] 118 9e-25
ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624... 116 3e-24
ref|XP_006580845.1| PREDICTED: uncharacterized protein LOC102660... 107 2e-21
emb|CAN75728.1| hypothetical protein VITISV_031408 [Vitis vinifera] 107 2e-21
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera] 104 1e-20
emb|CAN78509.1| hypothetical protein VITISV_031642 [Vitis vinifera] 104 1e-20
emb|CAN67819.1| hypothetical protein VITISV_041315 [Vitis vinifera] 103 2e-20
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] 103 2e-20
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] 102 4e-20
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera] 102 5e-20
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera] 102 5e-20
emb|CAN68623.1| hypothetical protein VITISV_010681 [Vitis vinifera] 100 2e-19
emb|CAN66884.1| hypothetical protein VITISV_000961 [Vitis vinifera] 100 2e-19
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc... 99 8e-19
emb|CAN64002.1| hypothetical protein VITISV_023116 [Vitis vinifera] 98 1e-18
gb|AAB82754.1| retrofit [Oryza longistaminata] 97 2e-18
gb|ACY72569.1| unknown [Oryza sativa Japonica Group] 96 4e-18
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group... 96 4e-18
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa] 96 5e-18
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|... 96 5e-18
>emb|CAN83839.1| hypothetical protein VITISV_023230 [Vitis vinifera]
Length = 731
Score = 118 bits (295), Expect = 9e-25
Identities = 51/93 (54%), Positives = 63/93 (67%)
Frame = +3
Query: 6 FLINHLSTPTLNHQSPIEAXXXXXXXXXXXXXXGCACFPHIKDYNQHKLDFRSTKCVFIG 185
+LIN L TP L+H SP + GC CFPH++ YN HKL FRS+KC+F+G
Sbjct: 63 YLINKLPTPILSHDSPFQKLFGCTPDSHFLKTFGCTCFPHLRPYNSHKLQFRSSKCLFLG 122
Query: 186 YSPNHKGYKCLHPSGKIYIAQSVTFNECEFPFS 284
YS HKGY CLHP GKIYI+++V FNE EFP+S
Sbjct: 123 YSSTHKGYLCLHPFGKIYISRNVIFNEHEFPYS 155
>ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624640 [Citrus sinensis]
Length = 1682
Score = 116 bits (291), Expect = 3e-24
Identities = 59/134 (44%), Positives = 77/134 (57%)
Frame = +3
Query: 6 FLINHLSTPTLNHQSPIEAXXXXXXXXXXXXXXGCACFPHIKDYNQHKLDFRSTKCVFIG 185
FLIN L TPTLN+ SP + GCACFP+++ YN+HKL FRS +CVFIG
Sbjct: 116 FLINRLPTPTLNNISPYQKLFQQVPDYVSLRVFGCACFPYLRPYNRHKLSFRSNRCVFIG 175
Query: 186 YSPNHKGYKCLHPSGKIYIAQSVTFNECEFPFSSGFHTSFFKNSESFSQSSNIQYSHWLP 365
YS +HKGY+CLH SG++Y++ V F+E FP+ SG S S S S+ +P
Sbjct: 176 YSSSHKGYQCLHSSGRVYVSNHVIFDEQSFPYVSGSDFSSIAQSCSPLDISSESKVTLVP 235
Query: 366 FLSHSSQVQEDDPS 407
S +QE S
Sbjct: 236 IPQVQSPLQESPAS 249
>ref|XP_006580845.1| PREDICTED: uncharacterized protein LOC102660325 [Glycine max]
Length = 868
Score = 107 bits (267), Expect = 2e-21
Identities = 51/106 (48%), Positives = 68/106 (64%), Gaps = 4/106 (3%)
Frame = +3
Query: 3 AFLINHLSTPTLNHQSPIEAXXXXXXXXXXXXXXGCACFPHIKDYNQHKLDFRSTKCVFI 182
A+LIN L + +LN+QS GC+CFP ++ YN HKLD+RS +C+F+
Sbjct: 760 AYLINRLPSVSLNNQSLYFKLLNKQPDYSCLRVFGCSCFPFLRPYNSHKLDYRSQECIFL 819
Query: 183 GYSPNHKGYKCLHPSGKIYIAQSVTFNECEFPFSSGFHT----SFF 308
GYS HKGYKCL P+G IYI++ V F E +FP+S+ FHT SFF
Sbjct: 820 GYSTAHKGYKCLAPNGHIYISKDVLFQESKFPYSTLFHTIPHYSFF 865
>emb|CAN75728.1| hypothetical protein VITISV_031408 [Vitis vinifera]
Length = 1099
Score = 107 bits (266), Expect = 2e-21
Identities = 47/95 (49%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Frame = +3
Query: 6 FLINHLSTPTL-NHQSPIEAXXXXXXXXXXXXXXGCACFPHIKDYNQHKLDFRSTKCVFI 182
F+IN L T L N QSP + GC+C+ +++ YN HK FRSTKC+F+
Sbjct: 440 FIINQLLTKVLANFQSPFKTLFGSKLDYSFFKVFGCSCYSYLRPYNSHKFSFRSTKCLFL 499
Query: 183 GYSPNHKGYKCLHPSGKIYIAQSVTFNECEFPFSS 287
GYSP HKGY+CL SG+IY+A+S+TFNE +FP+S+
Sbjct: 500 GYSPXHKGYRCLSXSGQIYVAKSITFNENDFPYST 534
>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
Length = 1262
Score = 104 bits (259), Expect = 1e-20
Identities = 45/93 (48%), Positives = 59/93 (63%)
Frame = +3
Query: 6 FLINHLSTPTLNHQSPIEAXXXXXXXXXXXXXXGCACFPHIKDYNQHKLDFRSTKCVFIG 185
FLIN L T L + P E GC CFPH++ YN+HKLDFRS+ C F+G
Sbjct: 511 FLINRLPTEVLKQKCPYEFLFNSKPNYSQLKVFGCLCFPHLRPYNKHKLDFRSSPCTFLG 570
Query: 186 YSPNHKGYKCLHPSGKIYIAQSVTFNECEFPFS 284
YS HKGYKCL+ G+++I++SV F+E FPF+
Sbjct: 571 YSSKHKGYKCLNQQGRMFISRSVVFDETRFPFA 603
>emb|CAN78509.1| hypothetical protein VITISV_031642 [Vitis vinifera]
Length = 722
Score = 104 bits (259), Expect = 1e-20
Identities = 46/97 (47%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
Frame = +3
Query: 6 FLINHLSTPTL-NHQSPIEAXXXXXXXXXXXXXXGCACFPHIKDYNQHKLDFRSTKCVFI 182
F+IN L T L N QSP E GC+C+P+++ YN HK F+STKC+F+
Sbjct: 466 FIINQLPTKVLANFQSPFETLFGSKPDYSFFKVFGCSCYPYLRSYNSHKFSFKSTKCLFL 525
Query: 183 GYSPNHKGYKCLHPSGKIYIAQSVTFNECEFPFSSGF 293
GYSP H GY+C S +IY+A+ VTFNE +FP+S+ F
Sbjct: 526 GYSPAHNGYRCFSSSNRIYVAKLVTFNENDFPYSTLF 562
>emb|CAN67819.1| hypothetical protein VITISV_041315 [Vitis vinifera]
Length = 1242
Score = 103 bits (258), Expect = 2e-20
Identities = 45/92 (48%), Positives = 59/92 (64%)
Frame = +3
Query: 6 FLINHLSTPTLNHQSPIEAXXXXXXXXXXXXXXGCACFPHIKDYNQHKLDFRSTKCVFIG 185
FLIN L T L + P E GC CFPH++ YN+HKLDFRS+ C F+G
Sbjct: 757 FLINRLPTEVLKQKCPYEFLFNSKPNYSQLKVFGCLCFPHLRPYNKHKLDFRSSPCTFLG 816
Query: 186 YSPNHKGYKCLHPSGKIYIAQSVTFNECEFPF 281
YS HKGYKCL+ G+++I++SV F+E +FPF
Sbjct: 817 YSSKHKGYKCLNQQGRMFISRSVXFDETKFPF 848
>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
Length = 1424
Score = 103 bits (257), Expect = 2e-20
Identities = 56/144 (38%), Positives = 76/144 (52%), Gaps = 4/144 (2%)
Frame = +3
Query: 6 FLINHLSTPTLNHQSPIEAXXXXXXXXXXXXXXGCACFPHIKDYNQHKLDFRSTKCVFIG 185
+LIN L TP L ++SP+E GC C+P+++ +N HKL FRS C F+G
Sbjct: 699 YLINRLPTPVLKNKSPLEVLFHQKPSYSXLKVFGCMCYPNLRPFNHHKLQFRSIPCTFLG 758
Query: 186 YSPNHKGYKCLHPSGKIYIAQSVTFNECEFPF----SSGFHTSFFKNSESFSQSSNIQYS 353
YS NHKGYKCL P+G I I++ V F+E FPF S TS F +S +
Sbjct: 759 YSLNHKGYKCLSPNGNILISRDVIFDEXAFPFAQLQSQKQXTSSFSSSXTSLPCQTSLPL 818
Query: 354 HWLPFLSHSSQVQEDDPSVVDTSS 425
LP + S +PS+ +S
Sbjct: 819 MVLPSSTSCSTSSPTNPSIFPATS 842
>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
Length = 1455
Score = 102 bits (255), Expect = 4e-20
Identities = 49/123 (39%), Positives = 68/123 (55%)
Frame = +3
Query: 6 FLINHLSTPTLNHQSPIEAXXXXXXXXXXXXXXGCACFPHIKDYNQHKLDFRSTKCVFIG 185
+L N L T L+H+ PIE GC+CFP+++ YN HKL +RS +C F+G
Sbjct: 716 YLSNRLPTAILHHKCPIEVLFKSIPDYSFLKVFGCSCFPNLRPYNTHKLQYRSEECTFLG 775
Query: 186 YSPNHKGYKCLHPSGKIYIAQSVTFNECEFPFSSGFHTSFFKNSESFSQSSNIQYSHWLP 365
YS HKGYKC+ +G++YI+ V FNE FP+S S S +S++ S P
Sbjct: 776 YSLKHKGYKCMSSNGRVYISHDVIFNETSFPYSKTIQVSSCLLSTVSPSTSHLSPSASPP 835
Query: 366 FLS 374
LS
Sbjct: 836 VLS 838
>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
Length = 1449
Score = 102 bits (254), Expect = 5e-20
Identities = 45/95 (47%), Positives = 63/95 (66%), Gaps = 1/95 (1%)
Frame = +3
Query: 6 FLINHLSTPTLNHQSPIEAXXXXXXXXXXXXXXGCACFPHIKDYNQHKLDFRSTKCVFIG 185
FLIN L T LN+QSP + GC C+P+I+ YN++KL +RS++CVF+G
Sbjct: 713 FLINRLPTKVLNYQSPFQILFGKSPNYHIFKIFGCLCYPYIRPYNKNKLSYRSSQCVFLG 772
Query: 186 YSPNHKGYKCLHP-SGKIYIAQSVTFNECEFPFSS 287
YS NHKGY CL+P +G++Y+ + V F+E FPF S
Sbjct: 773 YSSNHKGYMCLNPLTGRLYVTRHVVFHETVFPFQS 807
>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
Length = 1271
Score = 102 bits (254), Expect = 5e-20
Identities = 45/95 (47%), Positives = 63/95 (66%), Gaps = 1/95 (1%)
Frame = +3
Query: 6 FLINHLSTPTLNHQSPIEAXXXXXXXXXXXXXXGCACFPHIKDYNQHKLDFRSTKCVFIG 185
FLIN L T LN+QSP + GC C+P+I+ YN++KL +RS++CVF+G
Sbjct: 522 FLINRLPTKVLNYQSPFQILFGKSPNYHIFKIFGCLCYPYIRPYNKNKLSYRSSQCVFLG 581
Query: 186 YSPNHKGYKCLHP-SGKIYIAQSVTFNECEFPFSS 287
YS NHKGY CL+P +G++Y+ + V F+E FPF S
Sbjct: 582 YSSNHKGYMCLNPLTGRLYVTRHVVFHETVFPFQS 616
>emb|CAN68623.1| hypothetical protein VITISV_010681 [Vitis vinifera]
Length = 846
Score = 100 bits (250), Expect = 2e-19
Identities = 48/123 (39%), Positives = 68/123 (55%)
Frame = +3
Query: 6 FLINHLSTPTLNHQSPIEAXXXXXXXXXXXXXXGCACFPHIKDYNQHKLDFRSTKCVFIG 185
+L N L T L+H+ PIE GC+CFP+++ YN HKL +RS +C F+G
Sbjct: 298 YLSNRLPTAVLHHKCPIEVLFKSIPDYSFLKVFGCSCFPNLRPYNTHKLQYRSEECTFLG 357
Query: 186 YSPNHKGYKCLHPSGKIYIAQSVTFNECEFPFSSGFHTSFFKNSESFSQSSNIQYSHWLP 365
YS HKGYKC+ +G++YI++ V FNE F +S S S +S++ S P
Sbjct: 358 YSLKHKGYKCMFSNGRVYISRDVIFNETSFSYSKTIQASSCLPSTVSPSTSHLSPSAPPP 417
Query: 366 FLS 374
LS
Sbjct: 418 ILS 420
>emb|CAN66884.1| hypothetical protein VITISV_000961 [Vitis vinifera]
Length = 685
Score = 100 bits (250), Expect = 2e-19
Identities = 50/111 (45%), Positives = 66/111 (59%), Gaps = 1/111 (0%)
Frame = +3
Query: 6 FLINHLSTPTLNHQSPIEAXXXXXXXXXXXXXXGCACFPHIKDYNQHKLDFRSTKCVFIG 185
FL N L TP L + P+E GCAC+P+ + +N+HKL FRST C F+G
Sbjct: 330 FLHNRLPTPILKQKCPLELLFKTKPNYSFLKVFGCACYPNTRPFNKHKLQFRSTVCTFMG 389
Query: 186 YSPNHKGYKCLHPSGKIYIAQSVTFNECEFPFSSGFHTSF-FKNSESFSQS 335
YS NHKGYK L +GK+YI++ V F+E FPF+ +S+ NS S S S
Sbjct: 390 YSLNHKGYKRLDSNGKLYISRDVIFDETTFPFAQIDQSSYSIHNSSSLSNS 440
>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
gi|531389|gb|AAA57005.1| copia-like retrotransposon
Hopscotch polyprotein [Zea mays]
Length = 1439
Score = 98.6 bits (244), Expect = 8e-19
Identities = 49/127 (38%), Positives = 74/127 (58%), Gaps = 1/127 (0%)
Frame = +3
Query: 6 FLINHLSTPTLNHQSPIEAXXXXXXXXXXXXXXGCACFPHIKDYNQHKLDFRSTKCVFIG 185
+LIN + T+ H +P+ GCAC+P+++ YNQHKL FRST+CVF+G
Sbjct: 650 YLINRTPSKTIAHDTPLHKLTGATPDYSSLRIFGCACWPNLRPYNQHKLQFRSTRCVFLG 709
Query: 186 YSPNHKGYKCLHPS-GKIYIAQSVTFNECEFPFSSGFHTSFFKNSESFSQSSNIQYSHWL 362
YS HKG+KCL S G+IYI++ V F+E FPF+ S ++++ ++Y+ +
Sbjct: 710 YSNMHKGFKCLDISTGRIYISRDVVFDEHVFPFA------------SLNKNAGVKYTSEV 757
Query: 363 PFLSHSS 383
L H S
Sbjct: 758 LLLPHDS 764
>emb|CAN64002.1| hypothetical protein VITISV_023116 [Vitis vinifera]
Length = 1211
Score = 98.2 bits (243), Expect = 1e-18
Identities = 47/123 (38%), Positives = 67/123 (54%)
Frame = +3
Query: 6 FLINHLSTPTLNHQSPIEAXXXXXXXXXXXXXXGCACFPHIKDYNQHKLDFRSTKCVFIG 185
+L N L T L+H+ PIE GC+CFP+++ YN HKL + S +C F+G
Sbjct: 537 YLSNRLPTVVLHHKCPIEVLFKSIPBYSFLKVFGCSCFPNLRPYNTHKLQYXSEECTFLG 596
Query: 186 YSPNHKGYKCLHPSGKIYIAQSVTFNECEFPFSSGFHTSFFKNSESFSQSSNIQYSHWLP 365
YS HKGY C+ +G++YI++ V FNE FP+S S S +S++ S P
Sbjct: 597 YSLKHKGYXCMSSNGRVYISRDVIFNETSFPYSKTIQASSCLPSTVSPFTSHLSPSASPP 656
Query: 366 FLS 374
LS
Sbjct: 657 ILS 659
>gb|AAB82754.1| retrofit [Oryza longistaminata]
Length = 1445
Score = 97.1 bits (240), Expect = 2e-18
Identities = 42/95 (44%), Positives = 63/95 (66%), Gaps = 1/95 (1%)
Frame = +3
Query: 6 FLINHLSTPTLNHQSPIEAXXXXXXXXXXXXXXGCACFPHIKDYNQHKLDFRSTKCVFIG 185
+LIN + + T+ + +P+E GCAC+PH++ YN HKL FRS +CVF+G
Sbjct: 650 YLINRIPSKTIQNSTPLEKLFNQKPDYSSLRVFGCACWPHLRPYNTHKLQFRSKQCVFLG 709
Query: 186 YSPNHKGYKCLH-PSGKIYIAQSVTFNECEFPFSS 287
+S +HKG+KCL SG++YI++ V F+E FPFS+
Sbjct: 710 FSTHHKGFKCLDVSSGRVYISRDVVFDENVFPFST 744
>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
Length = 1436
Score = 96.3 bits (238), Expect = 4e-18
Identities = 42/95 (44%), Positives = 63/95 (66%), Gaps = 1/95 (1%)
Frame = +3
Query: 6 FLINHLSTPTLNHQSPIEAXXXXXXXXXXXXXXGCACFPHIKDYNQHKLDFRSTKCVFIG 185
+LIN + + T+ + +P+E GCAC+PH++ YN HKL FRS +CVF+G
Sbjct: 650 YLINRVPSKTIQNSTPLEKLFNQKPDYLSLRVFGCACWPHLRPYNTHKLQFRSKQCVFLG 709
Query: 186 YSPNHKGYKCLH-PSGKIYIAQSVTFNECEFPFSS 287
+S +HKG+KCL SG++YI++ V F+E FPFS+
Sbjct: 710 FSTHHKGFKCLDVSSGRVYISRDVVFDENIFPFST 744
>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108708884|gb|ABF96679.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1437
Score = 96.3 bits (238), Expect = 4e-18
Identities = 43/94 (45%), Positives = 61/94 (64%), Gaps = 1/94 (1%)
Frame = +3
Query: 6 FLINHLSTPTLNHQSPIEAXXXXXXXXXXXXXXGCACFPHIKDYNQHKLDFRSTKCVFIG 185
+LIN + L+ SP+E GCAC+P+++ YN+HKL FRST C F+G
Sbjct: 648 YLINRTPSRVLHDVSPLERLLGHKPDYNALRVFGCACWPNLRPYNKHKLQFRSTTCTFLG 707
Query: 186 YSPNHKGYKCLHPS-GKIYIAQSVTFNECEFPFS 284
YS HKG+KCL PS G++YI++ V F+E +FPF+
Sbjct: 708 YSTLHKGFKCLDPSTGRVYISRDVVFDETQFPFT 741
>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
Length = 1384
Score = 95.9 bits (237), Expect = 5e-18
Identities = 46/111 (41%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
Frame = +3
Query: 6 FLINHLSTPTLNHQSPIEAXXXXXXXXXXXXXXGCACFPHIKDYNQHKLDFRSTKCVFIG 185
++IN L + LN+ SP E GCACFP+++ YN KL RS +CVF+G
Sbjct: 594 YIINRLPSRVLNYASPYEQLFHRVPQYHSLKVFGCACFPYLRPYNSSKLQLRSKRCVFLG 653
Query: 186 YSPNHKGYKCLHP-SGKIYIAQSVTFNECEFPFSSGFHTSFFKNSESFSQS 335
YS NH+GY+C P SG++Y+++ V F+E FPF+ TS S QS
Sbjct: 654 YSLNHQGYRCFDPSSGRVYLSRHVLFDESSFPFTEPALTSNSSIDSSTDQS 704
>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1447
Score = 95.9 bits (237), Expect = 5e-18
Identities = 45/100 (45%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Frame = +3
Query: 6 FLINHLSTPTLNHQSPIEAXXXXXXXXXXXXXXGCACFPHIKDYNQHKLDFRSTKCVFIG 185
+LIN T L +P+E GCAC+PH++ YN HKL FRS +C F+G
Sbjct: 650 YLINRTPTKLLQFLTPLEHLFNQTPDYSSLRVFGCACWPHLRPYNTHKLQFRSKQCTFLG 709
Query: 186 YSPNHKGYKCLHPS-GKIYIAQSVTFNECEFPFSSGFHTS 302
YS HKG+KCL PS G++YI++ V F+E FPF+ HT+
Sbjct: 710 YSTLHKGFKCLDPSTGRVYISRDVIFDETNFPFAK-LHTN 748