BLASTX nr result

ID: Rehmannia24_contig00029740 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00029740
         (408 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004251631.1| PREDICTED: probable RNA-dependent RNA polyme...    56   6e-06
ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polyme...    55   7e-06
ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polyme...    55   7e-06

>ref|XP_004251631.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
           lycopersicum]
          Length = 759

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/48 (52%), Positives = 37/48 (77%)
 Frame = -2

Query: 149 REVAESTTVSQQLMVLNKLEYRKLFLVLSYIGRQKLEAVVTLDGANEI 6
           R+ A +  +S+QL+ LNKLE+RK FL+L+YIGR+K+E V+TL    +I
Sbjct: 176 RDRASTRGISEQLLALNKLEFRKFFLILNYIGRRKVEDVITLHDVGDI 223


>ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
           tuberosum]
          Length = 911

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 33/61 (54%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
 Frame = -2

Query: 182 VKRQSSLAGEHREVAESTT--VSQQLMVLNKLEYRKLFLVLSYIGRQKLEAVVTLDGANE 9
           V RQ S   E       T+  VSQQLM+LN+LE+RKLFLVLSYIG +KLE +V+   A++
Sbjct: 136 VARQLSFREEPESNCRRTSPNVSQQLMILNELEFRKLFLVLSYIGCKKLEDIVSPQIADD 195

Query: 8   I 6
           I
Sbjct: 196 I 196


>ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
           lycopersicum]
          Length = 1011

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 33/61 (54%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
 Frame = -2

Query: 182 VKRQSSLAGEHREVAESTT--VSQQLMVLNKLEYRKLFLVLSYIGRQKLEAVVTLDGANE 9
           V RQ S   E       T+  VSQQLM+LN+LE+RKLFLVLSYIG  KLE V++   A++
Sbjct: 134 VARQLSFCEEPESNCRRTSPYVSQQLMILNELEFRKLFLVLSYIGCNKLEDVISPQIADD 193

Query: 8   I 6
           I
Sbjct: 194 I 194


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