BLASTX nr result
ID: Rehmannia24_contig00029571
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00029571
(415 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAF64710.1| putative transposase [Ipomoea tricolor] 65 9e-09
ref|XP_003591246.1| Replication protein A 70 kDa DNA-binding sub... 61 2e-07
ref|XP_003599922.1| hypothetical protein MTR_3g048980 [Medicago ... 60 4e-07
ref|XP_003637946.1| Replication protein A 70 kDa DNA-binding sub... 59 5e-07
ref|XP_003622087.1| Replication factor A 51 kDa subunit [Medicag... 59 7e-07
ref|XP_003629182.1| ATP-dependent DNA helicase PIF1 [Medicago tr... 58 1e-06
gb|AFK33968.1| unknown [Lotus japonicus] 57 2e-06
ref|XP_003611977.1| Replication factor A protein [Medicago trunc... 57 3e-06
gb|ABD32456.2| Nucleic acid-binding, OB-fold [Medicago truncatula] 57 3e-06
ref|XP_003623662.1| hypothetical protein MTR_7g074180 [Medicago ... 55 7e-06
>dbj|BAF64710.1| putative transposase [Ipomoea tricolor]
Length = 517
Score = 65.1 bits (157), Expect = 9e-09
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 2/120 (1%)
Frame = -1
Query: 415 SPQHKQIAGRQTKMIDIVLENIQ*NIYLSSFGFLLMICLSNLIFFFLRGITLACTLWGEY 236
+PQ K IAG+ T++ID +LE+ + G + CT+W ++
Sbjct: 151 TPQDKVIAGKATRLIDFLLEDTE-------------------------GTQIKCTVWDDH 185
Query: 235 VDTLMNHLSTVGDNPIIILLQMCRVK--KYRGEIRVSNTYYVTKVMINSEVAEIIDYRSR 62
V L + +P+IILLQ CRVK G+I+V +++ VT++ +NS+ E ++R R
Sbjct: 186 VSKLEPFYQSTKQDPVIILLQFCRVKVDLSTGDIKVCSSFDVTQIWVNSDFPEFQEFRDR 245
>ref|XP_003591246.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula] gi|355480294|gb|AES61497.1| Replication
protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
Length = 524
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/111 (26%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Frame = -1
Query: 391 GRQTKMIDIVLENIQ*NIYLSSFGFLLMICLSNLIFFFLRGITLACTLWGEYVDTLMNH- 215
GR++K+ID+ L++++ N L C+LWGE+ D +++
Sbjct: 157 GRKSKVIDLTLQDLENN-------------------------RLHCSLWGEHADKIVSFF 191
Query: 214 LSTVGDNPIIILLQMCRVKKYRGEIRVSNTYYVTKVMINSEVAEIIDYRSR 62
++ +P++++LQ C+ +KY G + + N +Y TK+++N ++ E+ Y +R
Sbjct: 192 VNHDNSSPVVLILQFCKTRKYLGAMGIVNAFYGTKLILNGDLPEVATYIAR 242
>ref|XP_003599922.1| hypothetical protein MTR_3g048980 [Medicago truncatula]
gi|355488970|gb|AES70173.1| hypothetical protein
MTR_3g048980 [Medicago truncatula]
Length = 486
Score = 59.7 bits (143), Expect = 4e-07
Identities = 29/111 (26%), Positives = 60/111 (54%), Gaps = 1/111 (0%)
Frame = -1
Query: 391 GRQTKMIDIVLENIQ*NIYLSSFGFLLMICLSNLIFFFLRGITLACTLWGEYVDTLMNH- 215
GR++K+ID+ L++++ N L C+LWGE+ D +++
Sbjct: 157 GRKSKVIDLTLQDLENN-------------------------RLHCSLWGEHADKIVSFF 191
Query: 214 LSTVGDNPIIILLQMCRVKKYRGEIRVSNTYYVTKVMINSEVAEIIDYRSR 62
++ +P++++LQ C+ KY G + + N +Y TK+++N ++ E+ Y +R
Sbjct: 192 VNHDNSSPVVLILQFCKTHKYLGAMGIVNAFYGTKLILNGDLPEVATYIAR 242
>ref|XP_003637946.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula] gi|358347930|ref|XP_003638003.1| Replication
protein A 70 kDa DNA-binding subunit [Medicago
truncatula] gi|355503881|gb|AES85084.1| Replication
protein A 70 kDa DNA-binding subunit [Medicago
truncatula] gi|355503938|gb|AES85141.1| Replication
protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
Length = 566
Score = 59.3 bits (142), Expect = 5e-07
Identities = 23/66 (34%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Frame = -1
Query: 256 CTLWGEYVDTLMNHLSTVG-DNPIIILLQMCRVKKYRGEIRVSNTYYVTKVMINSEVAEI 80
CTLW Y + + + L+ +P+I+L+Q C++KKY+G + VSN ++ TK+++ ++ E
Sbjct: 177 CTLWANYAERMNSFLAAHDPSSPVIVLIQQCKLKKYQGIMGVSNAFFGTKLLLEGDLPEA 236
Query: 79 IDYRSR 62
I+++S+
Sbjct: 237 IEFKSK 242
>ref|XP_003622087.1| Replication factor A 51 kDa subunit [Medicago truncatula]
gi|355497102|gb|AES78305.1| Replication factor A 51 kDa
subunit [Medicago truncatula]
Length = 466
Score = 58.9 bits (141), Expect = 7e-07
Identities = 30/114 (26%), Positives = 60/114 (52%), Gaps = 3/114 (2%)
Frame = -1
Query: 400 QIAGRQTKMIDIVLENIQ*NIYLSSFGFLLMICLSNLIFFFLRGITLACTLWGEYVDTLM 221
Q+ G+ TK++D+ LE+++ N T+ CTLWG + + +
Sbjct: 111 QVKGKMTKILDLTLEDLESN-------------------------TIICTLWGHFAEQMN 145
Query: 220 NHLSTVGDN-PIIILLQMCRVKKY--RGEIRVSNTYYVTKVMINSEVAEIIDYR 68
+++ST G+ PI++++ +CR+ Y G ++N + TK++IN + E +Y+
Sbjct: 146 SYMSTNGNTFPIVVVMHLCRLNVYVFGGMYGIANAFNETKLLINPNIEECCNYK 199
>ref|XP_003629182.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
gi|355523204|gb|AET03658.1| ATP-dependent DNA helicase
PIF1 [Medicago truncatula]
Length = 604
Score = 57.8 bits (138), Expect = 1e-06
Identities = 26/115 (22%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Frame = -1
Query: 403 KQIAGRQTKMIDIVLENIQ*NIYLSSFGFLLMICLSNLIFFFLRGITLACTLWGEYVDTL 224
K++ GR +K++D+ L++ + + C+LW Y + +
Sbjct: 153 KEVNGRTSKLLDLTLQDSE-------------------------SRRIHCSLWATYAERM 187
Query: 223 MNHLST-VGDNPIIILLQMCRVKKYRGEIRVSNTYYVTKVMINSEVAEIIDYRSR 62
+ +T ++P+I+++Q C++K Y + VSN +Y K++++ ++AE+ +Y+S+
Sbjct: 188 TSFFATHEANSPVIVIMQQCKLKSYCSTMGVSNAFYGIKLIVDGDIAEVSEYKSK 242
>gb|AFK33968.1| unknown [Lotus japonicus]
Length = 303
Score = 57.4 bits (137), Expect = 2e-06
Identities = 25/67 (37%), Positives = 43/67 (64%)
Frame = -1
Query: 250 LWGEYVDTLMNHLSTVGDNPIIILLQMCRVKKYRGEIRVSNTYYVTKVMINSEVAEIIDY 71
L+G YVD L L+T G +I++Q+ +VK YRGE+ + N + TK++ N+E+ E+ +
Sbjct: 3 LFGNYVDVLKGFLATDGVGLAVIVVQLAKVKTYRGEVVIQNVMHATKLLWNAEIPEVAAF 62
Query: 70 RSR*SIH 50
R ++H
Sbjct: 63 RDGLALH 69
>ref|XP_003611977.1| Replication factor A protein [Medicago truncatula]
gi|358344381|ref|XP_003636268.1| Replication factor A
protein [Medicago truncatula]
gi|355502203|gb|AES83406.1| Replication factor A protein
[Medicago truncatula] gi|355513312|gb|AES94935.1|
Replication factor A protein [Medicago truncatula]
Length = 248
Score = 57.0 bits (136), Expect = 3e-06
Identities = 23/65 (35%), Positives = 40/65 (61%)
Frame = -1
Query: 256 CTLWGEYVDTLMNHLSTVGDNPIIILLQMCRVKKYRGEIRVSNTYYVTKVMINSEVAEII 77
C+LWG Y D + ++ + IL+Q C+ + Y G +RVSN+++ T ++IN + E
Sbjct: 184 CSLWGNYTDKFLQYMEGYDMSTPAILMQYCKQQNYVGMMRVSNSFFGTNLIINGDYPEFA 243
Query: 76 DYRSR 62
DY+S+
Sbjct: 244 DYKSK 248
>gb|ABD32456.2| Nucleic acid-binding, OB-fold [Medicago truncatula]
Length = 327
Score = 57.0 bits (136), Expect = 3e-06
Identities = 30/111 (27%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Frame = -1
Query: 391 GRQTKMIDIVLENIQ*NIYLSSFGFLLMICLSNLIFFFLRGITLACTLWGEYVDTLMNHL 212
GR++++ID+ LE+++ N L C+LWGE+VD ++
Sbjct: 158 GRKSRVIDLTLEDLENN-------------------------RLHCSLWGEHVDKIVTFF 192
Query: 211 STV-GDNPIIILLQMCRVKKYRGEIRVSNTYYVTKVMINSEVAEIIDYRSR 62
D P I++LQ C+ + Y G + V+N + TK+++N ++ ++ Y +R
Sbjct: 193 GNHDNDTPTILILQFCKTRMYLGVMGVANAFNGTKLILNGDLPDVAVYMTR 243
>ref|XP_003623662.1| hypothetical protein MTR_7g074180 [Medicago truncatula]
gi|355498677|gb|AES79880.1| hypothetical protein
MTR_7g074180 [Medicago truncatula]
Length = 326
Score = 55.5 bits (132), Expect = 7e-06
Identities = 29/111 (26%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Frame = -1
Query: 391 GRQTKMIDIVLENIQ*NIYLSSFGFLLMICLSNLIFFFLRGITLACTLWGEYVDTLMNHL 212
GR++++ID+ LE+++ N L C+LWGE+ D ++
Sbjct: 157 GRKSRVIDLTLEDLENN-------------------------RLHCSLWGEHADKIVTFF 191
Query: 211 STV-GDNPIIILLQMCRVKKYRGEIRVSNTYYVTKVMINSEVAEIIDYRSR 62
D P I++LQ C+ + Y G + V+N + TK+++N ++ ++ Y R
Sbjct: 192 GNHDNDTPTILILQFCKTRMYLGAMGVANAFNGTKLILNGDLPDVAAYMRR 242