BLASTX nr result
ID: Rehmannia24_contig00029407
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00029407
(427 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006432134.1| hypothetical protein CICLE_v10000096mg [Citr... 90 3e-16
ref|XP_006432133.1| hypothetical protein CICLE_v10000096mg [Citr... 90 3e-16
ref|XP_006432136.1| hypothetical protein CICLE_v10000096mg [Citr... 86 7e-15
ref|XP_006465091.1| PREDICTED: DNA excision repair protein ERCC-... 84 3e-14
ref|XP_006465090.1| PREDICTED: DNA excision repair protein ERCC-... 84 3e-14
ref|XP_004229292.1| PREDICTED: uncharacterized protein LOC101245... 78 1e-12
ref|XP_006345475.1| PREDICTED: DNA excision repair protein ERCC-... 76 4e-12
ref|XP_002264260.1| PREDICTED: DNA excision repair protein ERCC-... 74 2e-11
ref|XP_004159269.1| PREDICTED: DNA excision repair protein ERCC-... 68 1e-09
ref|XP_004143401.1| PREDICTED: DNA excision repair protein ERCC-... 68 1e-09
gb|EMJ14892.1| hypothetical protein PRUPE_ppa000829mg [Prunus pe... 65 9e-09
ref|XP_002309928.1| hypothetical protein POPTR_0007s04450g [Popu... 64 3e-08
ref|XP_002306264.2| hypothetical protein POPTR_0005s06770g [Popu... 61 1e-07
gb|EXB36902.1| DNA excision repair protein ERCC-6-like protein [... 59 7e-07
gb|EOX92564.1| Chromatin remodeling 24 [Theobroma cacao] 58 1e-06
>ref|XP_006432134.1| hypothetical protein CICLE_v10000096mg [Citrus clementina]
gi|567879153|ref|XP_006432135.1| hypothetical protein
CICLE_v10000096mg [Citrus clementina]
gi|557534256|gb|ESR45374.1| hypothetical protein
CICLE_v10000096mg [Citrus clementina]
gi|557534257|gb|ESR45375.1| hypothetical protein
CICLE_v10000096mg [Citrus clementina]
Length = 1007
Score = 89.7 bits (221), Expect = 3e-16
Identities = 56/141 (39%), Positives = 82/141 (58%), Gaps = 4/141 (2%)
Frame = -3
Query: 416 DEGPKFDGISDFDSPLQVNKPYESNGNEIRDILNDLSSRLEILSIEKKRVPKKVDLMEDF 237
D+ P F I+DFDSPLQ ++ GNEIRDILNDLS+RLEILSI+K+RVPK VD +DF
Sbjct: 107 DDEPNFSDITDFDSPLQS----KTGGNEIRDILNDLSARLEILSIDKRRVPKTVDPEDDF 162
Query: 236 QESVRSKLYDVTINEGYPEYQAAASSNLLP---SDSPVEIIESKVGRMFTN-EHKKEKTY 69
V++ PEY +A SS L SDS + + VG + + + E++
Sbjct: 163 SRLVKNGDTGQGSKGNLPEYASAESSFSLTSDLSDSSSGVTKDNVGGVVESVADEYEESK 222
Query: 68 NADIKDDSYVGKANRTMHKYE 6
D++ D ++ + + T ++
Sbjct: 223 GDDVEGDEHLSRVHETKKHHQ 243
>ref|XP_006432133.1| hypothetical protein CICLE_v10000096mg [Citrus clementina]
gi|557534255|gb|ESR45373.1| hypothetical protein
CICLE_v10000096mg [Citrus clementina]
Length = 959
Score = 89.7 bits (221), Expect = 3e-16
Identities = 56/141 (39%), Positives = 82/141 (58%), Gaps = 4/141 (2%)
Frame = -3
Query: 416 DEGPKFDGISDFDSPLQVNKPYESNGNEIRDILNDLSSRLEILSIEKKRVPKKVDLMEDF 237
D+ P F I+DFDSPLQ ++ GNEIRDILNDLS+RLEILSI+K+RVPK VD +DF
Sbjct: 107 DDEPNFSDITDFDSPLQS----KTGGNEIRDILNDLSARLEILSIDKRRVPKTVDPEDDF 162
Query: 236 QESVRSKLYDVTINEGYPEYQAAASSNLLP---SDSPVEIIESKVGRMFTN-EHKKEKTY 69
V++ PEY +A SS L SDS + + VG + + + E++
Sbjct: 163 SRLVKNGDTGQGSKGNLPEYASAESSFSLTSDLSDSSSGVTKDNVGGVVESVADEYEESK 222
Query: 68 NADIKDDSYVGKANRTMHKYE 6
D++ D ++ + + T ++
Sbjct: 223 GDDVEGDEHLSRVHETKKHHQ 243
>ref|XP_006432136.1| hypothetical protein CICLE_v10000096mg [Citrus clementina]
gi|557534258|gb|ESR45376.1| hypothetical protein
CICLE_v10000096mg [Citrus clementina]
Length = 1107
Score = 85.5 bits (210), Expect = 7e-15
Identities = 49/92 (53%), Positives = 60/92 (65%)
Frame = -3
Query: 416 DEGPKFDGISDFDSPLQVNKPYESNGNEIRDILNDLSSRLEILSIEKKRVPKKVDLMEDF 237
D+ P F I+DFDSPLQ ++ GNEIRDILNDLS+RLEILSI+K+RVPK VD +DF
Sbjct: 107 DDEPNFSDITDFDSPLQS----KTGGNEIRDILNDLSARLEILSIDKRRVPKTVDPEDDF 162
Query: 236 QESVRSKLYDVTINEGYPEYQAAASSNLLPSD 141
V++ PEY +A SS L SD
Sbjct: 163 SRLVKNGDTGQGSKGNLPEYASAESSFSLTSD 194
>ref|XP_006465091.1| PREDICTED: DNA excision repair protein ERCC-6-like isoform X2
[Citrus sinensis]
Length = 1149
Score = 83.6 bits (205), Expect = 3e-14
Identities = 49/96 (51%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Frame = -3
Query: 416 DEGPKFDGISDFDSPLQVNKPYESN----GNEIRDILNDLSSRLEILSIEKKRVPKKVDL 249
D+GPKF I+ FDSP + E++ GNEIRDILNDLS+RLEILSI+K+RVPK VD
Sbjct: 141 DDGPKFSDITVFDSPPKAKTVSENDNYKGGNEIRDILNDLSARLEILSIDKRRVPKTVDP 200
Query: 248 MEDFQESVRSKLYDVTINEGYPEYQAAASSNLLPSD 141
+DF V++ PEY +A SS L SD
Sbjct: 201 EDDFSRLVKNGDTGQGSKGNLPEYASAESSFSLTSD 236
>ref|XP_006465090.1| PREDICTED: DNA excision repair protein ERCC-6-like isoform X1
[Citrus sinensis]
Length = 1181
Score = 83.6 bits (205), Expect = 3e-14
Identities = 49/96 (51%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Frame = -3
Query: 416 DEGPKFDGISDFDSPLQVNKPYESN----GNEIRDILNDLSSRLEILSIEKKRVPKKVDL 249
D+GPKF I+ FDSP + E++ GNEIRDILNDLS+RLEILSI+K+RVPK VD
Sbjct: 173 DDGPKFSDITVFDSPPKAKTVSENDNYKGGNEIRDILNDLSARLEILSIDKRRVPKTVDP 232
Query: 248 MEDFQESVRSKLYDVTINEGYPEYQAAASSNLLPSD 141
+DF V++ PEY +A SS L SD
Sbjct: 233 EDDFSRLVKNGDTGQGSKGNLPEYASAESSFSLTSD 268
>ref|XP_004229292.1| PREDICTED: uncharacterized protein LOC101245692 [Solanum
lycopersicum]
Length = 1214
Score = 78.2 bits (191), Expect = 1e-12
Identities = 57/139 (41%), Positives = 71/139 (51%), Gaps = 6/139 (4%)
Frame = -3
Query: 419 NDEGPKFDGISDFDSP-----LQVNKPYESNGNEIRDILNDLSSRLEILSIEKKRVPKKV 255
+DE GI+DFDSP V + +GNEIRDILNDLSSRLEILSIEKKR PK
Sbjct: 276 DDEESGLLGITDFDSPPCQVKSAVQNEHGGSGNEIRDILNDLSSRLEILSIEKKRAPKP- 334
Query: 254 DLMEDFQESVRSKLYDVTINEGYPEYQAAASSNLLPSDSPVEII-ESKVGRMFTNEHKKE 78
+D+T PEYQ+A SS L S S + ES++G E+ K+
Sbjct: 335 --------------HDLTKKNEIPEYQSAGSSFSLSSGSSSDSTKESRIGGEIPKEYLKK 380
Query: 77 KTYNADIKDDSYVGKANRT 21
++ V K N T
Sbjct: 381 IDSGTASNNNCVVHKFNDT 399
>ref|XP_006345475.1| PREDICTED: DNA excision repair protein ERCC-6-like [Solanum
tuberosum]
Length = 1209
Score = 76.3 bits (186), Expect = 4e-12
Identities = 59/139 (42%), Positives = 72/139 (51%), Gaps = 6/139 (4%)
Frame = -3
Query: 419 NDEGPKFDGISDFDSPLQ-----VNKPYESNGNEIRDILNDLSSRLEILSIEKKRVPKKV 255
+DE + I+DFDSP + V + +GNEIRDILNDLSSRLEILSIEKKR PK
Sbjct: 275 DDEESRLLDITDFDSPPRQVKNAVQNEHGGSGNEIRDILNDLSSRLEILSIEKKRAPKP- 333
Query: 254 DLMEDFQESVRSKLYDVTINEGYPEYQAAASSNLLPSDSPVEIIESKVGRMFTNEHK-KE 78
+D+T PEYQ+A SS L S S + +K R+ HK KE
Sbjct: 334 --------------HDLTKKNEIPEYQSAGSSFSLSSGSSSD--STKESRIGGEIHKVKE 377
Query: 77 KTYNADIKDDSYVGKANRT 21
K+D V K N T
Sbjct: 378 IDSGYASKNDCVVQKFNDT 396
>ref|XP_002264260.1| PREDICTED: DNA excision repair protein ERCC-6-like [Vitis vinifera]
gi|296088517|emb|CBI37508.3| unnamed protein product
[Vitis vinifera]
Length = 1043
Score = 73.9 bits (180), Expect = 2e-11
Identities = 48/93 (51%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Frame = -3
Query: 407 PKFDGISDFDSPLQVNKPYESNGNEIRDILNDLSSRLEILSIEKKRVPKKVDLMEDFQES 228
PKF ISDFDSP + + GNEIR ILNDLSSRLE LSIE KR PK+ D +ES
Sbjct: 95 PKFSEISDFDSPHHCSN---AGGNEIRGILNDLSSRLESLSIETKRNPKRAD---QTRES 148
Query: 227 VRSKLYDVTINE----GYPEYQAAASSNLLPSD 141
+ DV IN+ PEY +A+SS + SD
Sbjct: 149 LNFAAADVAINQEKKLDVPEYASASSSFSVTSD 181
>ref|XP_004159269.1| PREDICTED: DNA excision repair protein ERCC-6-like [Cucumis
sativus]
Length = 565
Score = 68.2 bits (165), Expect = 1e-09
Identities = 40/69 (57%), Positives = 48/69 (69%), Gaps = 5/69 (7%)
Frame = -3
Query: 407 PKFDGISDFDSPLQVNK-PYESN---GNEIRDILNDLSSRLEILSIEKKR-VPKKVDLME 243
P F GI+DFDSP P E+ G+EIRDILNDLS+RLE+LS+EK+R PKKVD +E
Sbjct: 75 PNFSGITDFDSPSPPPPLPVENRVNKGSEIRDILNDLSARLELLSVEKRREKPKKVDSIE 134
Query: 242 DFQESVRSK 216
DF S K
Sbjct: 135 DFSASYGGK 143
>ref|XP_004143401.1| PREDICTED: DNA excision repair protein ERCC-6-like [Cucumis
sativus]
Length = 1016
Score = 67.8 bits (164), Expect = 1e-09
Identities = 40/69 (57%), Positives = 48/69 (69%), Gaps = 5/69 (7%)
Frame = -3
Query: 407 PKFDGISDFDSPLQVNK-PYESN---GNEIRDILNDLSSRLEILSIEKKR-VPKKVDLME 243
P F GI+DFDSP P E+ G+EIRDILNDLS+RLE+LS+EK+R PKKVD +E
Sbjct: 75 PNFSGITDFDSPSPPPPLPVENRVNKGSEIRDILNDLSARLELLSVEKRREKPKKVDSIE 134
Query: 242 DFQESVRSK 216
DF S K
Sbjct: 135 DFSASSGGK 143
>gb|EMJ14892.1| hypothetical protein PRUPE_ppa000829mg [Prunus persica]
Length = 988
Score = 65.1 bits (157), Expect = 9e-09
Identities = 43/94 (45%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Frame = -3
Query: 407 PKFDGISDFDSPLQVNK-----PYESNGNEIRDILNDLSSRLEILSIEKKRVPKKVDLME 243
P F I+DF+SP + + GNEIRDIL+DLSSRLE LSIE +R +K D++E
Sbjct: 127 PNFSDITDFESPTLPQRNASKTSANTGGNEIRDILDDLSSRLEFLSIE-RRGARKADMVE 185
Query: 242 DFQESVRSKLYDVTINEGYPEYQAAASSNLLPSD 141
SV K D PEY++A SS L SD
Sbjct: 186 GSFPSVICKEVDDGKKVDLPEYESAGSSFSLASD 219
>ref|XP_002309928.1| hypothetical protein POPTR_0007s04450g [Populus trichocarpa]
gi|222852831|gb|EEE90378.1| hypothetical protein
POPTR_0007s04450g [Populus trichocarpa]
Length = 1108
Score = 63.5 bits (153), Expect = 3e-08
Identities = 48/140 (34%), Positives = 77/140 (55%), Gaps = 8/140 (5%)
Frame = -3
Query: 401 FDGISDFDSPLQVNKPYESNG--------NEIRDILNDLSSRLEILSIEKKRVPKKVDLM 246
FD I+DFDSP+ P +S G NEI+DIL+DL+SRL++LSIEKKRVP+
Sbjct: 122 FDDIADFDSPI----PSKSVGDCGNNKGVNEIKDILSDLTSRLDLLSIEKKRVPE----- 172
Query: 245 EDFQESVRSKLYDVTINEGYPEYQAAASSNLLPSDSPVEIIESKVGRMFTNEHKKEKTYN 66
+V K++ V Y ++ S + PSDS +++I++ G +E ++
Sbjct: 173 ---NNNVVKKVHVVE----YASAESLFSLSSSPSDSSLDVIKNGGG---DDESAVDEYEE 222
Query: 65 ADIKDDSYVGKANRTMHKYE 6
D+ +S+ + +R + K E
Sbjct: 223 GDLLSESFDDEVSRGLKKNE 242
>ref|XP_002306264.2| hypothetical protein POPTR_0005s06770g [Populus trichocarpa]
gi|550338279|gb|EEE93260.2| hypothetical protein
POPTR_0005s06770g [Populus trichocarpa]
Length = 1058
Score = 61.2 bits (147), Expect = 1e-07
Identities = 44/128 (34%), Positives = 65/128 (50%), Gaps = 10/128 (7%)
Frame = -3
Query: 401 FDGISDFDSPLQVNKPYESNGN----EIRDILNDLSSRLEILSIEKKRVP------KKVD 252
FDGI+DFDSP+ + + N EI+DILNDL+SRL++LSIEK+R+P KKVD
Sbjct: 99 FDGIADFDSPIPSKNVGDCDNNRGVNEIKDILNDLTSRLDLLSIEKRRMPENGNVVKKVD 158
Query: 251 LMEDFQESVRSKLYDVTINEGYPEYQAAASSNLLPSDSPVEIIESKVGRMFTNEHKKEKT 72
++E Y +++ SS+ PSDS S V + F ++
Sbjct: 159 VVE------------------YASAESSFSSSSGPSDS-----SSNVNKNFVEAYEDGHL 195
Query: 71 YNADIKDD 48
+ D+
Sbjct: 196 LSESFADE 203
>gb|EXB36902.1| DNA excision repair protein ERCC-6-like protein [Morus notabilis]
Length = 1236
Score = 58.9 bits (141), Expect = 7e-07
Identities = 43/100 (43%), Positives = 57/100 (57%), Gaps = 10/100 (10%)
Frame = -3
Query: 407 PKFDGISDFDSPL----QVNKPYESNG--NEIRDILNDLSSRLEILSIEKKRVPKKVDLM 246
P F I+DF+SP +V + NG NEIRDILNDL +RLE LSIEK+ K ++
Sbjct: 198 PTFSDIADFESPPPPHPRVVNDSDKNGGDNEIRDILNDLGARLEFLSIEKR---KDINKT 254
Query: 245 EDFQESVRSKLYDVTINE----GYPEYQAAASSNLLPSDS 138
F+ S+ Y+ I+E PEY +A SS L SD+
Sbjct: 255 NTFEGSLPVFKYNKEIDEEKKVDLPEYASAESSFSLASDA 294
>gb|EOX92564.1| Chromatin remodeling 24 [Theobroma cacao]
Length = 1060
Score = 57.8 bits (138), Expect = 1e-06
Identities = 42/101 (41%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Frame = -3
Query: 407 PKFDGISDFDSPLQVNKPYESNGNEIRDILNDLSSRLEILSIEKKRVPKKVDLMEDFQES 228
P F I DFDSPL E G++IRDILNDLSS+L++LSIEKK P K
Sbjct: 116 PNFSEICDFDSPLPTRHVSEG-GSQIRDILNDLSSKLDLLSIEKKAAPPK---------- 164
Query: 227 VRSKLYDVTINEGYPEYQAAASS---NLLPSDSPVEIIESK 114
PEY +A SS + PSDS +I +K
Sbjct: 165 ------------KIPEYASAESSFSGSPDPSDSSSGVIVTK 193