BLASTX nr result
ID: Rehmannia24_contig00029396
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00029396
(428 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta... 76 4e-12
gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam... 76 5e-12
emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677... 76 5e-12
gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japo... 74 2e-11
gb|EEE55133.1| hypothetical protein OsJ_02920 [Oryza sativa Japo... 74 2e-11
gb|AAX95129.1| retrotransposon protein, putative, unclassified [... 73 3e-11
gb|EEE51789.1| hypothetical protein OsJ_33245 [Oryza sativa Japo... 73 3e-11
gb|ABA91837.2| retrotransposon protein, putative, unclassified [... 73 3e-11
gb|EMJ08780.1| hypothetical protein PRUPE_ppa018489mg, partial [... 72 6e-11
ref|XP_002450843.1| hypothetical protein SORBIDRAFT_05g019526 [S... 72 6e-11
gb|EEC71228.1| hypothetical protein OsI_03168 [Oryza sativa Indi... 72 6e-11
gb|AAD24831.1| putative non-LTR retroelement reverse transcripta... 72 1e-10
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta... 72 1e-10
gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana] 70 3e-10
gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana] 70 3e-10
gb|ABA97687.1| retrotransposon protein, putative, unclassified [... 68 1e-09
gb|EMJ08062.1| hypothetical protein PRUPE_ppa1027174mg, partial ... 67 2e-09
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ... 67 2e-09
gb|AAP54617.2| retrotransposon protein, putative, unclassified [... 67 2e-09
gb|EPS60668.1| hypothetical protein M569_14134, partial [Genlise... 67 2e-09
>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1374
Score = 76.3 bits (186), Expect = 4e-12
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 6/144 (4%)
Frame = -3
Query: 414 TAAKLEELSCKGNQK------DWRTWECLKGVLNQAYASEEMYWKQKSRNQWLREGDRNT 253
+A +++EL K + D R LK L+Q Y +EE +W++KSR W+R GDRNT
Sbjct: 293 SAVRIQELQFKLDAATKQIPFDRRELARLKKELSQEYNNEEQFWQEKSRIMWMRNGDRNT 352
Query: 252 KFFHACVVQRQKVNCIERLISRRGEVCESREKIVKEIECFYKXXXXXXXXXXXXXXLHGI 73
K+FHA R+ N I++LI G S E + + E ++K L +
Sbjct: 353 KYFHAATKNRRAQNRIQKLIDEEGREWTSDEDLGRVAEAYFKKLFASEDVGYTVEELENL 412
Query: 72 PCSISNAQSQRLSRPVEDQEIKEA 1
+S+ + L P+ +E++ A
Sbjct: 413 TPLVSDQMNNNLLAPITKEEVQRA 436
>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
42.57) [Arabidopsis thaliana]
Length = 1662
Score = 75.9 bits (185), Expect = 5e-12
Identities = 43/141 (30%), Positives = 67/141 (47%)
Frame = -3
Query: 423 IEETAAKLEELSCKGNQKDWRTWECLKGVLNQAYASEEMYWKQKSRNQWLREGDRNTKFF 244
I + A L++ N+ + RT ++ L AY EE YW+QKSRNQW++EGDRNT+FF
Sbjct: 678 INQLQAALDKAMSSVNRTERRTISHIQRELTVAYRDEERYWQQKSRNQWMKEGDRNTEFF 737
Query: 243 HACVVQRQKVNCIERLISRRGEVCESREKIVKEIECFYKXXXXXXXXXXXXXXLHGIPCS 64
HAC R VN + + G + ++I + F+ G
Sbjct: 738 HACTKTRFSVNRLVTIKDEEGMIYRGDKEIGVHAQEFFTKVYESNGRPVSIIDFAGFKPI 797
Query: 63 ISNAQSQRLSRPVEDQEIKEA 1
++ + L++ + D EI A
Sbjct: 798 VTEQINDDLTKDLSDLEIYNA 818
>emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1|
putative protein [Arabidopsis thaliana]
Length = 1294
Score = 75.9 bits (185), Expect = 5e-12
Identities = 43/141 (30%), Positives = 67/141 (47%)
Frame = -3
Query: 423 IEETAAKLEELSCKGNQKDWRTWECLKGVLNQAYASEEMYWKQKSRNQWLREGDRNTKFF 244
I + A L++ N+ + RT ++ L AY EE YW+QKSRNQW++EGDRNT+FF
Sbjct: 658 INQLQAALDKAMSSVNRTERRTISHIQRELTVAYRDEERYWQQKSRNQWMKEGDRNTEFF 717
Query: 243 HACVVQRQKVNCIERLISRRGEVCESREKIVKEIECFYKXXXXXXXXXXXXXXLHGIPCS 64
HAC R VN + + G + ++I + F+ G
Sbjct: 718 HACTKTRFSVNRLVTIKDEEGMIYRGDKEIGVHAQEFFTKVYESNGRPVSIIDFAGFKPI 777
Query: 63 ISNAQSQRLSRPVEDQEIKEA 1
++ + L++ + D EI A
Sbjct: 778 VTEQINDDLTKDLSDLEIYNA 798
>gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japonica Group]
Length = 1494
Score = 74.3 bits (181), Expect = 2e-11
Identities = 42/141 (29%), Positives = 70/141 (49%)
Frame = -3
Query: 423 IEETAAKLEELSCKGNQKDWRTWECLKGVLNQAYASEEMYWKQKSRNQWLREGDRNTKFF 244
IE +LEE+ +G + LK L + EE++WKQ+SR WL+EGDRNT++F
Sbjct: 548 IERCRRELEEMRMRGREDSEPDVHRLKIFLQELLHREEIWWKQRSRITWLKEGDRNTRYF 607
Query: 243 HACVVQRQKVNCIERLISRRGEVCESREKIVKEIECFYKXXXXXXXXXXXXXXLHGIPCS 64
H R + N I++L G +C E++ + F++ L+
Sbjct: 608 HLKASWRARKNLIKKLRRSDGMMCSKEEELGEIARSFFRDLYTKDESLNPGELLNMFEPK 667
Query: 63 ISNAQSQRLSRPVEDQEIKEA 1
I++ + L++P D+EI +A
Sbjct: 668 ITDEMNGMLTKPFTDEEISDA 688
>gb|EEE55133.1| hypothetical protein OsJ_02920 [Oryza sativa Japonica Group]
Length = 1049
Score = 74.3 bits (181), Expect = 2e-11
Identities = 41/116 (35%), Positives = 59/116 (50%)
Frame = -3
Query: 348 LKGVLNQAYASEEMYWKQKSRNQWLREGDRNTKFFHACVVQRQKVNCIERLISRRGEVCE 169
L+ L + EE+ KQ+SR +WL+EGDRNT FFHA R++ N I+ L+ G C
Sbjct: 61 LEQQLCDLFEREEIMAKQRSRIEWLKEGDRNTSFFHARASARRRTNKIKLLVRDDGSSCS 120
Query: 168 SREKIVKEIECFYKXXXXXXXXXXXXXXLHGIPCSISNAQSQRLSRPVEDQEIKEA 1
+ I E F+K L IPC + + ++ L + D+EIKEA
Sbjct: 121 ESQGIKLMAEHFFKKLFTSEQCESVEEVLEAIPCKVDESINEELCKAYSDEEIKEA 176
>gb|AAX95129.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] gi|62733115|gb|AAX95232.1|
retrotransposon protein, putative, unclassified [Oryza
sativa Japonica Group]
Length = 1324
Score = 73.2 bits (178), Expect = 3e-11
Identities = 39/116 (33%), Positives = 59/116 (50%)
Frame = -3
Query: 348 LKGVLNQAYASEEMYWKQKSRNQWLREGDRNTKFFHACVVQRQKVNCIERLISRRGEVCE 169
LK L++ E+YW+Q++ WL +GDRNTKFFH C +R+K N I++L GEV
Sbjct: 777 LKYRLDKLEEQRELYWRQRANQHWLEKGDRNTKFFHECASERKKRNKIKKLRRDDGEVIT 836
Query: 168 SREKIVKEIECFYKXXXXXXXXXXXXXXLHGIPCSISNAQSQRLSRPVEDQEIKEA 1
+ I FYK L +P +++ + L + V +EIK+A
Sbjct: 837 DEAGSLSLISEFYKQLFTAGVPLNLDELLQNVPKRVTSTMNDELMKGVTTEEIKKA 892
>gb|EEE51789.1| hypothetical protein OsJ_33245 [Oryza sativa Japonica Group]
Length = 825
Score = 73.2 bits (178), Expect = 3e-11
Identities = 39/116 (33%), Positives = 59/116 (50%)
Frame = -3
Query: 348 LKGVLNQAYASEEMYWKQKSRNQWLREGDRNTKFFHACVVQRQKVNCIERLISRRGEVCE 169
LK L++ E+YW+Q++ WL +GDRNTKFFH C +R+K N I++L GEV
Sbjct: 278 LKYRLDKLEEQRELYWRQRANQHWLEKGDRNTKFFHECASERKKRNKIKKLRRDDGEVIT 337
Query: 168 SREKIVKEIECFYKXXXXXXXXXXXXXXLHGIPCSISNAQSQRLSRPVEDQEIKEA 1
+ I FYK L +P +++ + L + V +EIK+A
Sbjct: 338 DEAGSLSLISEFYKQLFTAGVPLNLDELLQNVPKRVTSTMNDELMKGVTTEEIKKA 393
>gb|ABA91837.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1301
Score = 73.2 bits (178), Expect = 3e-11
Identities = 39/116 (33%), Positives = 59/116 (50%)
Frame = -3
Query: 348 LKGVLNQAYASEEMYWKQKSRNQWLREGDRNTKFFHACVVQRQKVNCIERLISRRGEVCE 169
LK L++ E+YW+Q++ WL +GDRNTKFFH C +R+K N I++L GEV
Sbjct: 754 LKYRLDKLEEQRELYWRQRANQHWLEKGDRNTKFFHECASERKKRNKIKKLRRDDGEVIT 813
Query: 168 SREKIVKEIECFYKXXXXXXXXXXXXXXLHGIPCSISNAQSQRLSRPVEDQEIKEA 1
+ I FYK L +P +++ + L + V +EIK+A
Sbjct: 814 DEAGSLSLISEFYKQLFTAGVPLNLDELLQNVPKRVTSTMNDELMKGVTTEEIKKA 869
>gb|EMJ08780.1| hypothetical protein PRUPE_ppa018489mg, partial [Prunus persica]
Length = 1146
Score = 72.4 bits (176), Expect = 6e-11
Identities = 38/108 (35%), Positives = 57/108 (52%)
Frame = -3
Query: 324 YASEEMYWKQKSRNQWLREGDRNTKFFHACVVQRQKVNCIERLISRRGEVCESREKIVKE 145
++ EE YWKQ+SR WL GD NTKFFH +QR++ N IE L+ G + I +E
Sbjct: 240 WSREETYWKQRSRLNWLSAGDANTKFFHTTTLQRRQRNKIETLLKSEGNCISGDQAIREE 299
Query: 144 IECFYKXXXXXXXXXXXXXXLHGIPCSISNAQSQRLSRPVEDQEIKEA 1
F+ L+ + SI+ AQ++RL+ P +E++ A
Sbjct: 300 FGIFFGNLFKSGGPRNWGGILNCVHASITEAQNKRLTDPFSMEEVRTA 347
>ref|XP_002450843.1| hypothetical protein SORBIDRAFT_05g019526 [Sorghum bicolor]
gi|241936686|gb|EES09831.1| hypothetical protein
SORBIDRAFT_05g019526 [Sorghum bicolor]
Length = 1209
Score = 72.4 bits (176), Expect = 6e-11
Identities = 37/105 (35%), Positives = 56/105 (53%)
Frame = -3
Query: 315 EEMYWKQKSRNQWLREGDRNTKFFHACVVQRQKVNCIERLISRRGEVCESREKIVKEIEC 136
EE+ WKQ++R QWL GD+NT FFH +R+K N I +L + G+V E R+++ +
Sbjct: 603 EELMWKQRARIQWLSAGDKNTHFFHLRASRRRKRNMIVKLKTANGQVTEDRKEMGQMATS 662
Query: 135 FYKXXXXXXXXXXXXXXLHGIPCSISNAQSQRLSRPVEDQEIKEA 1
FYK L +P ++ + +L P + EIKEA
Sbjct: 663 FYKLLYTAEGTENMEAVLETVPAKVTTEMNDKLIAPFSELEIKEA 707
>gb|EEC71228.1| hypothetical protein OsI_03168 [Oryza sativa Indica Group]
Length = 995
Score = 72.4 bits (176), Expect = 6e-11
Identities = 38/108 (35%), Positives = 56/108 (51%)
Frame = -3
Query: 324 YASEEMYWKQKSRNQWLREGDRNTKFFHACVVQRQKVNCIERLISRRGEVCESREKIVKE 145
+ EE+ KQ+SR +WL+EGDRNT FFHA R++ N I+ L+ G C + I
Sbjct: 69 FEREEIMAKQRSRIEWLKEGDRNTSFFHARASARRRTNKIKLLVRDDGSSCSESQGIKLM 128
Query: 144 IECFYKXXXXXXXXXXXXXXLHGIPCSISNAQSQRLSRPVEDQEIKEA 1
E F++ L IPC + + ++ L + D+EIKEA
Sbjct: 129 AEHFFEKLFTSEQCESVEEVLEAIPCKVDESINEELCKAYSDEEIKEA 176
>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1524
Score = 71.6 bits (174), Expect = 1e-10
Identities = 35/116 (30%), Positives = 60/116 (51%)
Frame = -3
Query: 348 LKGVLNQAYASEEMYWKQKSRNQWLREGDRNTKFFHACVVQRQKVNCIERLISRRGEVCE 169
L+ L +A++ EE+YWKQKSRNQW++EGD+NT +FHAC R N + ++ +G +
Sbjct: 477 LQESLAKAFSDEEIYWKQKSRNQWMKEGDQNTGYFHACTKTRYSQNRVNTIMDDQGRMFT 536
Query: 168 SREKIVKEIECFYKXXXXXXXXXXXXXXLHGIPCSISNAQSQRLSRPVEDQEIKEA 1
++I + F+ +++N + L++ D EI +A
Sbjct: 537 GDKEIGNHAQDFFTNIFSTNGIKVSPIDFADFKSTVTNTVNLDLTKEFSDTEIYDA 592
>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1750
Score = 71.6 bits (174), Expect = 1e-10
Identities = 35/116 (30%), Positives = 60/116 (51%)
Frame = -3
Query: 348 LKGVLNQAYASEEMYWKQKSRNQWLREGDRNTKFFHACVVQRQKVNCIERLISRRGEVCE 169
L+ L +A++ EE+YWKQKSRNQW++EGD+NT +FHAC R N + ++ +G +
Sbjct: 703 LQESLAKAFSDEEIYWKQKSRNQWMKEGDQNTGYFHACTKTRYSQNRVNTIMDDQGRMFT 762
Query: 168 SREKIVKEIECFYKXXXXXXXXXXXXXXLHGIPCSISNAQSQRLSRPVEDQEIKEA 1
++I + F+ +++N + L++ D EI +A
Sbjct: 763 GDKEIGNHAQDFFTNIFSTNGIKVSPIDFADFKSTVTNTVNLDLTKEFSDTEIYDA 818
>gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]
Length = 1270
Score = 70.1 bits (170), Expect = 3e-10
Identities = 41/116 (35%), Positives = 57/116 (49%)
Frame = -3
Query: 348 LKGVLNQAYASEEMYWKQKSRNQWLREGDRNTKFFHACVVQRQKVNCIERLISRRGEVCE 169
LK L +AY EE YWKQKSR +WLR G+RN+K+FHA V Q ++ IE+L G +
Sbjct: 284 LKKDLAKAYREEEAYWKQKSRQKWLRSGNRNSKYFHAAVKQNRQRKRIEKLKDVNGNMQT 343
Query: 168 SREKIVKEIECFYKXXXXXXXXXXXXXXLHGIPCSISNAQSQRLSRPVEDQEIKEA 1
S + ++ G+ +S ++ L V QEIKEA
Sbjct: 344 SEAAKGEVAAAYFGNLFKSSNPSGFTDWFSGLVPRVSEVMNESLVGEVSAQEIKEA 399
>gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]
Length = 1254
Score = 70.1 bits (170), Expect = 3e-10
Identities = 41/116 (35%), Positives = 57/116 (49%)
Frame = -3
Query: 348 LKGVLNQAYASEEMYWKQKSRNQWLREGDRNTKFFHACVVQRQKVNCIERLISRRGEVCE 169
LK L +AY EE YWKQKSR +WLR G+RN+K+FHA V Q ++ IE+L G +
Sbjct: 287 LKKDLAKAYREEEAYWKQKSRQKWLRSGNRNSKYFHAAVKQNRQRKRIEKLKDVNGNMQT 346
Query: 168 SREKIVKEIECFYKXXXXXXXXXXXXXXLHGIPCSISNAQSQRLSRPVEDQEIKEA 1
S + ++ G+ +S ++ L V QEIKEA
Sbjct: 347 SEAAKGEVAAAYFGNLFKSSNPSGFTDWFSGLVPRVSEVMNESLVGEVSAQEIKEA 402
>gb|ABA97687.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1070
Score = 67.8 bits (164), Expect = 1e-09
Identities = 33/74 (44%), Positives = 46/74 (62%)
Frame = -3
Query: 348 LKGVLNQAYASEEMYWKQKSRNQWLREGDRNTKFFHACVVQRQKVNCIERLISRRGEVCE 169
L+G LNQ YA+EE+YW+++S +WL EGD NT FFH R++ I RL G + E
Sbjct: 353 LEGELNQLYAAEEIYWQERSGEKWLLEGDANTAFFHGVANGRKRKTTISRLEGENGTI-E 411
Query: 168 SREKIVKEIECFYK 127
+ E++ I FYK
Sbjct: 412 NPEELKAHIYSFYK 425
>gb|EMJ08062.1| hypothetical protein PRUPE_ppa1027174mg, partial [Prunus persica]
Length = 316
Score = 67.4 bits (163), Expect = 2e-09
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Frame = -3
Query: 357 WECLKGVLNQ---AYASEEMYWKQKSRNQWLREGDRNTKFFHACVVQRQKVNCIERLISR 187
W K V+N+ A EE++WK KSRN WL EGD+NTK FH + R+K N +E L +
Sbjct: 14 WNLEKKVINEYNNILAQEELFWKHKSRNLWLHEGDKNTKIFHLSTIVRRKRNKLEGLENE 73
Query: 186 RGEVCESREKI 154
G+ ES+E++
Sbjct: 74 AGQWIESKEEM 84
>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
Japonica Group]
Length = 1382
Score = 67.4 bits (163), Expect = 2e-09
Identities = 39/112 (34%), Positives = 57/112 (50%)
Frame = -3
Query: 336 LNQAYASEEMYWKQKSRNQWLREGDRNTKFFHACVVQRQKVNCIERLISRRGEVCESREK 157
L + + EE+ +Q+SR WLREGDRNT FFHA R++ N I+ L+ G C S+E
Sbjct: 341 LCELFEKEEIMARQRSRVDWLREGDRNTAFFHARASARRRTNRIKELVRDDGSRCISQEG 400
Query: 156 IVKEIECFYKXXXXXXXXXXXXXXLHGIPCSISNAQSQRLSRPVEDQEIKEA 1
I + E FY+ L IP + + + L + ++EIK A
Sbjct: 401 IKRMAEVFYENLFSSEPCDSMEEVLDAIPNKVGDFINGELGKQYTNEEIKTA 452
>gb|AAP54617.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] gi|125575397|gb|EAZ16681.1| hypothetical
protein OsJ_32156 [Oryza sativa Japonica Group]
Length = 1339
Score = 67.4 bits (163), Expect = 2e-09
Identities = 39/112 (34%), Positives = 57/112 (50%)
Frame = -3
Query: 336 LNQAYASEEMYWKQKSRNQWLREGDRNTKFFHACVVQRQKVNCIERLISRRGEVCESREK 157
L + + EE+ +Q+SR WLREGDRNT FFHA R++ N I+ L+ G C S+E
Sbjct: 298 LCELFEKEEIMARQRSRVDWLREGDRNTAFFHARASARRRTNRIKELVRDDGSRCISQEG 357
Query: 156 IVKEIECFYKXXXXXXXXXXXXXXLHGIPCSISNAQSQRLSRPVEDQEIKEA 1
I + E FY+ L IP + + + L + ++EIK A
Sbjct: 358 IKRMAEVFYENLFSSEPCDSMEEVLDAIPNKVGDFINGELGKQYTNEEIKTA 409
>gb|EPS60668.1| hypothetical protein M569_14134, partial [Genlisea aurea]
Length = 393
Score = 67.0 bits (162), Expect = 2e-09
Identities = 33/84 (39%), Positives = 48/84 (57%)
Frame = -3
Query: 378 NQKDWRTWECLKGVLNQAYASEEMYWKQKSRNQWLREGDRNTKFFHACVVQRQKVNCIER 199
++++W + LK LN EE YWKQ+S+ WL GDRNT FFHA +R+ N I
Sbjct: 186 SEENWNREKALKVELNSLLMLEESYWKQRSKAHWLINGDRNTAFFHAHASRRRSTNRIHM 245
Query: 198 LISRRGEVCESREKIVKEIECFYK 127
L + G + E+ +I EI ++K
Sbjct: 246 LRTDDGHLLETETEIHSEIAEYFK 269