BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00029359
         (576 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHH30452.1| photosystem I assembly protein ycf4 (chloroplast)...   125   8e-27
ref|YP_008815948.1| photosystem I assembly protein Ycf4 (chlorop...   125   1e-26
ref|YP_008592499.1| photosystem I assembly protein Ycf4 (chlorop...   124   1e-26
ref|YP_008964045.1| photosystem I assembly protein Ycf4 [Ajuga r...   124   2e-26
ref|YP_004376432.1| Ycf4 protein [Olea europaea subsp. europaea]...   124   2e-26
gb|ABG74742.1| YCF4 protein [Forsythia europaea]                      124   2e-26
ref|YP_008964877.1| photosystem I assembly protein Ycf4 (chlorop...   124   2e-26
ref|YP_007353926.1| photosystem I assembly protein Ycf4 (chlorop...   124   2e-26
gb|ADD30766.1| photosystem I assembly protein ycf4 [Antirrhinum ...   124   2e-26
ref|YP_008814867.1| photosystem I assembly protein ycf4 (chlorop...   123   4e-26
gb|AGJ51266.1| photosystem I assembly protein Ycf4 (chloroplast)...   123   4e-26
ref|YP_538859.1| photosystem I assembly protein Ycf4 [Solanum bu...   123   4e-26
ref|YP_398875.1| photosystem I assembly protein Ycf4 [Nicotiana ...   123   4e-26
gb|AEQ36949.1| photosystem I assembly protein Ycf4 (chloroplast)...   123   4e-26
ref|YP_006666041.1| photosystem I assembly protein ycf4 (chlorop...   123   4e-26
ref|YP_006503802.1| photosystem I assembly protein Ycf4 (chlorop...   123   4e-26
ref|YP_004891616.1| ycf4 gene product (chloroplast) [Nicotiana u...   123   4e-26
ref|YP_004222657.1| photosystem I assembly protein ycf4 [Anthris...   123   4e-26
gb|ABU85238.1| photosystem I assembly protein ycf4 [Anethum grav...   123   4e-26
ref|YP_740128.1| photosystem I assembly protein ycf4 [Daucus car...   123   4e-26

>gb|AHH30452.1| photosystem I assembly protein ycf4 (chloroplast) [Bartsia
           inaequalis]
          Length = 184

 Score =  125 bits (314), Expect = 8e-27
 Identities = 62/66 (93%), Positives = 65/66 (98%)
 Frame = +3

Query: 3   RLIIKDIQSVRIEVKKGIYARRVLYMDIRGRGAIPLTRTDENLTPREIEQKAAELAYFLR 182
           R +IKDIQSVR+EVK+GIYARRVLYMDIRGRGAIPLTRTDENLTPREIEQKAAELAYFLR
Sbjct: 119 RFLIKDIQSVRVEVKEGIYARRVLYMDIRGRGAIPLTRTDENLTPREIEQKAAELAYFLR 178

Query: 183 VPIEVF 200
           VPIEVF
Sbjct: 179 VPIEVF 184


>ref|YP_008815948.1| photosystem I assembly protein Ycf4 (chloroplast) [Lindenbergia
           philippensis] gi|557136874|emb|CDI43929.1| photosystem I
           assembly protein Ycf4 (chloroplast) [Lindenbergia
           philippensis]
          Length = 184

 Score =  125 bits (313), Expect = 1e-26
 Identities = 63/66 (95%), Positives = 64/66 (96%)
 Frame = +3

Query: 3   RLIIKDIQSVRIEVKKGIYARRVLYMDIRGRGAIPLTRTDENLTPREIEQKAAELAYFLR 182
           R  IKDIQSVRIEVK+GIYARRVLYMDIRGRGAIPLTRTDENLTPREIEQKAAELAYFLR
Sbjct: 119 RFFIKDIQSVRIEVKEGIYARRVLYMDIRGRGAIPLTRTDENLTPREIEQKAAELAYFLR 178

Query: 183 VPIEVF 200
           VPIEVF
Sbjct: 179 VPIEVF 184


>ref|YP_008592499.1| photosystem I assembly protein Ycf4 (chloroplast) [Andrographis
           paniculata] gi|532164847|gb|AGT79857.1| photosystem I
           assembly protein Ycf4 (chloroplast) [Andrographis
           paniculata]
          Length = 184

 Score =  124 bits (312), Expect = 1e-26
 Identities = 62/66 (93%), Positives = 65/66 (98%)
 Frame = +3

Query: 3   RLIIKDIQSVRIEVKKGIYARRVLYMDIRGRGAIPLTRTDENLTPREIEQKAAELAYFLR 182
           R +IKDIQSVRIEVK+GIYARRVLYMDIRGRGAIPLTRTDENLTPREIEQKAA+LAYFLR
Sbjct: 119 RFLIKDIQSVRIEVKEGIYARRVLYMDIRGRGAIPLTRTDENLTPREIEQKAAQLAYFLR 178

Query: 183 VPIEVF 200
           VPIEVF
Sbjct: 179 VPIEVF 184


>ref|YP_008964045.1| photosystem I assembly protein Ycf4 [Ajuga reptans]
           gi|558697201|gb|AHA84956.1| photosystem I assembly
           protein Ycf4 [Ajuga reptans]
          Length = 184

 Score =  124 bits (311), Expect = 2e-26
 Identities = 61/66 (92%), Positives = 65/66 (98%)
 Frame = +3

Query: 3   RLIIKDIQSVRIEVKKGIYARRVLYMDIRGRGAIPLTRTDENLTPREIEQKAAELAYFLR 182
           R +IKDIQSVRIEVK+G+YARRVLYMDIRGRGAIPLTRTDENLTP+EIEQKAAELAYFLR
Sbjct: 119 RFLIKDIQSVRIEVKEGVYARRVLYMDIRGRGAIPLTRTDENLTPKEIEQKAAELAYFLR 178

Query: 183 VPIEVF 200
           VPIEVF
Sbjct: 179 VPIEVF 184


>ref|YP_004376432.1| Ycf4 protein [Olea europaea subsp. europaea]
           gi|334700293|ref|YP_004563792.1| Ycf4 protein [Olea
           europaea subsp. cuspidata]
           gi|334701630|ref|YP_004564015.1| Ycf4 protein [Olea
           woodiana subsp. woodiana]
           gi|334701899|ref|YP_004564508.1| Ycf4 protein [Olea
           europaea subsp. maroccana]
           gi|365823322|ref|YP_003359370.2| Ycf4 (chloroplast)
           [Olea europaea] gi|291059264|gb|ADD72100.1| photosystem
           I assembly protein ycf4 [Olea europaea]
           gi|328795444|emb|CBR30326.1| Ycf4 protein [Olea europaea
           subsp. europaea] gi|334084412|emb|CBR23841.1| Ycf4
           protein [Olea europaea subsp. cuspidata]
           gi|334084498|emb|CBR24633.1| Ycf4 protein [Olea europaea
           subsp. europaea] gi|334084584|emb|CBR30417.1| Ycf4
           protein [Olea europaea subsp. europaea]
           gi|334084670|emb|CBS29362.1| Ycf4 protein [Olea woodiana
           subsp. woodiana] gi|334084875|emb|CBS29253.1| Ycf4
           protein [Olea europaea subsp. maroccana]
           gi|334084961|emb|CBJ04309.1| Ycf4 protein [Olea europaea
           subsp. cuspidata] gi|334085047|emb|CBR23750.1| Ycf4
           protein [Olea europaea subsp. cuspidata]
           gi|363413087|gb|ADA69937.2| Ycf4 (chloroplast) [Olea
           europaea] gi|510934415|emb|CCQ09113.1| Ycf4 protein
           (chloroplast) [Olea europaea subsp. europaea]
          Length = 184

 Score =  124 bits (311), Expect = 2e-26
 Identities = 62/66 (93%), Positives = 65/66 (98%)
 Frame = +3

Query: 3   RLIIKDIQSVRIEVKKGIYARRVLYMDIRGRGAIPLTRTDENLTPREIEQKAAELAYFLR 182
           R +IKDIQSVRIEVK+GIYARRVLYMDIRG+GAIPLTRTDENLTPREIEQKAAELAYFLR
Sbjct: 119 RFLIKDIQSVRIEVKEGIYARRVLYMDIRGQGAIPLTRTDENLTPREIEQKAAELAYFLR 178

Query: 183 VPIEVF 200
           VPIEVF
Sbjct: 179 VPIEVF 184


>gb|ABG74742.1| YCF4 protein [Forsythia europaea]
          Length = 184

 Score =  124 bits (311), Expect = 2e-26
 Identities = 62/66 (93%), Positives = 65/66 (98%)
 Frame = +3

Query: 3   RLIIKDIQSVRIEVKKGIYARRVLYMDIRGRGAIPLTRTDENLTPREIEQKAAELAYFLR 182
           R +IKDIQSVRIEVK+GIYARRVLYMDIRG+GAIPLTRTDENLTPREIEQKAAELAYFLR
Sbjct: 119 RFLIKDIQSVRIEVKEGIYARRVLYMDIRGQGAIPLTRTDENLTPREIEQKAAELAYFLR 178

Query: 183 VPIEVF 200
           VPIEVF
Sbjct: 179 VPIEVF 184


>ref|YP_008964877.1| photosystem I assembly protein Ycf4 (chloroplast) [Schwalbea
           americana] gi|560176710|emb|CDJ38634.1| photosystem I
           assembly protein Ycf4 (chloroplast) [Schwalbea
           americana]
          Length = 184

 Score =  124 bits (310), Expect = 2e-26
 Identities = 61/66 (92%), Positives = 65/66 (98%)
 Frame = +3

Query: 3   RLIIKDIQSVRIEVKKGIYARRVLYMDIRGRGAIPLTRTDENLTPREIEQKAAELAYFLR 182
           RL+IKDIQS+RIEVK+GIYARRVLYMDIRGRGAIPLT TDENLTPRE+EQKAAELAYFLR
Sbjct: 119 RLLIKDIQSIRIEVKEGIYARRVLYMDIRGRGAIPLTHTDENLTPREMEQKAAELAYFLR 178

Query: 183 VPIEVF 200
           VPIEVF
Sbjct: 179 VPIEVF 184


>ref|YP_007353926.1| photosystem I assembly protein Ycf4 (chloroplast) [Tectona grandis]
           gi|438687615|emb|CCP47141.1| photosystem I assembly
           protein Ycf4 (chloroplast) [Tectona grandis]
           gi|438688299|emb|CCP47230.1| photosystem I assembly
           protein Ycf4 (chloroplast) [Tectona grandis]
           gi|438688423|emb|CCP47319.1| photosystem I assembly
           protein Ycf4 (chloroplast) [Tectona grandis]
          Length = 184

 Score =  124 bits (310), Expect = 2e-26
 Identities = 62/66 (93%), Positives = 64/66 (96%)
 Frame = +3

Query: 3   RLIIKDIQSVRIEVKKGIYARRVLYMDIRGRGAIPLTRTDENLTPREIEQKAAELAYFLR 182
           R +IKDIQSVRIEVK+GIYARRVLYMDIRGRGAIPLTR DENLTPREIEQKAAELAYFLR
Sbjct: 119 RFLIKDIQSVRIEVKEGIYARRVLYMDIRGRGAIPLTRADENLTPREIEQKAAELAYFLR 178

Query: 183 VPIEVF 200
           VPIEVF
Sbjct: 179 VPIEVF 184


>gb|ADD30766.1| photosystem I assembly protein ycf4 [Antirrhinum majus]
          Length = 184

 Score =  124 bits (310), Expect = 2e-26
 Identities = 61/66 (92%), Positives = 65/66 (98%)
 Frame = +3

Query: 3   RLIIKDIQSVRIEVKKGIYARRVLYMDIRGRGAIPLTRTDENLTPREIEQKAAELAYFLR 182
           R ++KDIQ+VRIEVK+GIYARRVLYMDIRGRGAIPLTRTDENLTPREIEQKAAELAYFLR
Sbjct: 119 RFLLKDIQAVRIEVKEGIYARRVLYMDIRGRGAIPLTRTDENLTPREIEQKAAELAYFLR 178

Query: 183 VPIEVF 200
           VPIEVF
Sbjct: 179 VPIEVF 184


>ref|YP_008814867.1| photosystem I assembly protein ycf4 (chloroplast) [Aralia undulata]
           gi|458599101|gb|AGG38967.1| photosystem I assembly
           protein ycf4 (chloroplast) [Aralia undulata]
          Length = 184

 Score =  123 bits (308), Expect = 4e-26
 Identities = 61/66 (92%), Positives = 65/66 (98%)
 Frame = +3

Query: 3   RLIIKDIQSVRIEVKKGIYARRVLYMDIRGRGAIPLTRTDENLTPREIEQKAAELAYFLR 182
           R +IKDIQSVRIEVK+GIYARRVLYMDIRG+GAIPLTRTDEN+TPREIEQKAAELAYFLR
Sbjct: 119 RFLIKDIQSVRIEVKEGIYARRVLYMDIRGQGAIPLTRTDENVTPREIEQKAAELAYFLR 178

Query: 183 VPIEVF 200
           VPIEVF
Sbjct: 179 VPIEVF 184


>gb|AGJ51266.1| photosystem I assembly protein Ycf4 (chloroplast) [Solanum
           carolinense]
          Length = 184

 Score =  123 bits (308), Expect = 4e-26
 Identities = 61/66 (92%), Positives = 65/66 (98%)
 Frame = +3

Query: 3   RLIIKDIQSVRIEVKKGIYARRVLYMDIRGRGAIPLTRTDENLTPREIEQKAAELAYFLR 182
           R +IKDIQSVRIEVK+GIYARRVLYMDIRG+G+IPLTRTDENLTPREIEQKAAELAYFLR
Sbjct: 119 RFLIKDIQSVRIEVKEGIYARRVLYMDIRGQGSIPLTRTDENLTPREIEQKAAELAYFLR 178

Query: 183 VPIEVF 200
           VPIEVF
Sbjct: 179 VPIEVF 184


>ref|YP_538859.1| photosystem I assembly protein Ycf4 [Solanum bulbocastanum]
           gi|108773141|ref|YP_635650.1| photosystem I assembly
           protein Ycf4 [Solanum tuberosum]
           gi|544163624|ref|YP_008563099.1| photosystem I assembly
           protein ycf4 (chloroplast) [Solanum lycopersicum]
           gi|544170682|ref|AP_004939.1| photosystem I assembly
           protein Ycf4 (chloroplast) [Solanum lycopersicum]
           gi|460365375|ref|XP_004228578.1| PREDICTED: photosystem
           I assembly protein Ycf4-like [Solanum lycopersicum]
           gi|122201779|sp|Q2MI89.1|YCF4_SOLLC RecName:
           Full=Photosystem I assembly protein Ycf4
           gi|122201821|sp|Q2MIH6.1|YCF4_SOLBU RecName:
           Full=Photosystem I assembly protein Ycf4
           gi|122209887|sp|Q2VEG6.1|YCF4_SOLTU RecName:
           Full=Photosystem I assembly protein Ycf4
           gi|82754638|gb|ABB90052.1| photosystem I assembly
           protein Yc4 [Solanum tuberosum]
           gi|84371906|gb|ABC56224.1| photosystem I assembly
           protein ycf4 [Solanum bulbocastanum]
           gi|84371994|gb|ABC56311.1| photosystem I assembly
           protein ycf4 (chloroplast) [Solanum lycopersicum]
           gi|88656815|gb|ABD47068.1| photosystem I assembly
           protein ycf4 [Solanum tuberosum]
           gi|89241682|emb|CAJ32404.1| photosystem I assembly
           protein Ycf4 [Solanum lycopersicum]
           gi|329124593|gb|AEB72150.1| photosystem I assembly
           protein ycf4 (chloroplast) [Solanum tuberosum]
           gi|329124680|gb|AEB72236.1| photosystem I assembly
           protein ycf4 (chloroplast) [Solanum tuberosum]
          Length = 184

 Score =  123 bits (308), Expect = 4e-26
 Identities = 61/66 (92%), Positives = 65/66 (98%)
 Frame = +3

Query: 3   RLIIKDIQSVRIEVKKGIYARRVLYMDIRGRGAIPLTRTDENLTPREIEQKAAELAYFLR 182
           R +IKDIQSVRIEVK+GIYARRVLYMDIRG+G+IPLTRTDENLTPREIEQKAAELAYFLR
Sbjct: 119 RFLIKDIQSVRIEVKEGIYARRVLYMDIRGQGSIPLTRTDENLTPREIEQKAAELAYFLR 178

Query: 183 VPIEVF 200
           VPIEVF
Sbjct: 179 VPIEVF 184


>ref|YP_398875.1| photosystem I assembly protein Ycf4 [Nicotiana tomentosiformis]
           gi|122212897|sp|Q33C22.1|YCF4_NICTO RecName:
           Full=Photosystem I assembly protein Ycf4
           gi|80750937|dbj|BAE48013.1| hypothetical protein
           [Nicotiana tomentosiformis]
          Length = 184

 Score =  123 bits (308), Expect = 4e-26
 Identities = 61/66 (92%), Positives = 65/66 (98%)
 Frame = +3

Query: 3   RLIIKDIQSVRIEVKKGIYARRVLYMDIRGRGAIPLTRTDENLTPREIEQKAAELAYFLR 182
           R +IKDIQSVRIEVK+GIYARRVLYMDIRG+G+IPLTRTDENLTPREIEQKAAELAYFLR
Sbjct: 119 RFLIKDIQSVRIEVKEGIYARRVLYMDIRGQGSIPLTRTDENLTPREIEQKAAELAYFLR 178

Query: 183 VPIEVF 200
           VPIEVF
Sbjct: 179 VPIEVF 184


>gb|AEQ36949.1| photosystem I assembly protein Ycf4 (chloroplast) [Datura
           stramonium]
          Length = 184

 Score =  123 bits (308), Expect = 4e-26
 Identities = 61/66 (92%), Positives = 65/66 (98%)
 Frame = +3

Query: 3   RLIIKDIQSVRIEVKKGIYARRVLYMDIRGRGAIPLTRTDENLTPREIEQKAAELAYFLR 182
           R +IKDIQSVRIEVK+GIYARRVLYMDIRG+G+IPLTRTDENLTPREIEQKAAELAYFLR
Sbjct: 119 RFLIKDIQSVRIEVKEGIYARRVLYMDIRGQGSIPLTRTDENLTPREIEQKAAELAYFLR 178

Query: 183 VPIEVF 200
           VPIEVF
Sbjct: 179 VPIEVF 184


>ref|YP_006666041.1| photosystem I assembly protein ycf4 (chloroplast) [Capsicum annuum]
           gi|401065943|gb|AFP90787.1| photosystem I assembly
           protein ycf4 (chloroplast) [Capsicum annuum]
          Length = 184

 Score =  123 bits (308), Expect = 4e-26
 Identities = 61/66 (92%), Positives = 65/66 (98%)
 Frame = +3

Query: 3   RLIIKDIQSVRIEVKKGIYARRVLYMDIRGRGAIPLTRTDENLTPREIEQKAAELAYFLR 182
           R +IKDIQSVRIEVK+GIYARRVLYMDIRG+G+IPLTRTDENLTPREIEQKAAELAYFLR
Sbjct: 119 RFLIKDIQSVRIEVKEGIYARRVLYMDIRGQGSIPLTRTDENLTPREIEQKAAELAYFLR 178

Query: 183 VPIEVF 200
           VPIEVF
Sbjct: 179 VPIEVF 184


>ref|YP_006503802.1| photosystem I assembly protein Ycf4 (chloroplast) [Datura
           stramonium] gi|350996523|gb|AEQ37034.1| photosystem I
           assembly protein Ycf4 [Datura stramonium]
          Length = 184

 Score =  123 bits (308), Expect = 4e-26
 Identities = 61/66 (92%), Positives = 65/66 (98%)
 Frame = +3

Query: 3   RLIIKDIQSVRIEVKKGIYARRVLYMDIRGRGAIPLTRTDENLTPREIEQKAAELAYFLR 182
           R +IKDIQSVRIEVK+GIYARRVLYMDIRG+G+IPLTRTDENLTPREIEQKAAELAYFLR
Sbjct: 119 RFLIKDIQSVRIEVKEGIYARRVLYMDIRGQGSIPLTRTDENLTPREIEQKAAELAYFLR 178

Query: 183 VPIEVF 200
           VPIEVF
Sbjct: 179 VPIEVF 184


>ref|YP_004891616.1| ycf4 gene product (chloroplast) [Nicotiana undulata]
           gi|347453917|gb|AEO95575.1| photosystem I assembly
           protein ycf4 (chloroplast) [Nicotiana undulata]
           gi|347454028|gb|AEO95685.1| photosystem I assembly
           protein ycf4 [synthetic construct]
          Length = 184

 Score =  123 bits (308), Expect = 4e-26
 Identities = 61/66 (92%), Positives = 65/66 (98%)
 Frame = +3

Query: 3   RLIIKDIQSVRIEVKKGIYARRVLYMDIRGRGAIPLTRTDENLTPREIEQKAAELAYFLR 182
           R +IKDIQSVRIEVK+GIYARRVLYMDIRG+G+IPLTRTDENLTPREIEQKAAELAYFLR
Sbjct: 119 RFLIKDIQSVRIEVKEGIYARRVLYMDIRGQGSIPLTRTDENLTPREIEQKAAELAYFLR 178

Query: 183 VPIEVF 200
           VPIEVF
Sbjct: 179 VPIEVF 184


>ref|YP_004222657.1| photosystem I assembly protein ycf4 [Anthriscus cerefolium]
           gi|289645586|gb|ADD13649.1| photosystem I assembly
           protein ycf4 [Anthriscus cerefolium]
          Length = 184

 Score =  123 bits (308), Expect = 4e-26
 Identities = 61/66 (92%), Positives = 65/66 (98%)
 Frame = +3

Query: 3   RLIIKDIQSVRIEVKKGIYARRVLYMDIRGRGAIPLTRTDENLTPREIEQKAAELAYFLR 182
           R +IKDIQSVRIEVK+GIYARRVLYMDIRG+GAIPLTRTDEN+TPREIEQKAAELAYFLR
Sbjct: 119 RFLIKDIQSVRIEVKEGIYARRVLYMDIRGQGAIPLTRTDENVTPREIEQKAAELAYFLR 178

Query: 183 VPIEVF 200
           VPIEVF
Sbjct: 179 VPIEVF 184


>gb|ABU85238.1| photosystem I assembly protein ycf4 [Anethum graveolens]
          Length = 184

 Score =  123 bits (308), Expect = 4e-26
 Identities = 61/66 (92%), Positives = 65/66 (98%)
 Frame = +3

Query: 3   RLIIKDIQSVRIEVKKGIYARRVLYMDIRGRGAIPLTRTDENLTPREIEQKAAELAYFLR 182
           R +IKDIQSVRIEVK+GIYARRVLYMDIRG+GAIPLTRTDEN+TPREIEQKAAELAYFLR
Sbjct: 119 RFLIKDIQSVRIEVKEGIYARRVLYMDIRGQGAIPLTRTDENVTPREIEQKAAELAYFLR 178

Query: 183 VPIEVF 200
           VPIEVF
Sbjct: 179 VPIEVF 184


>ref|YP_740128.1| photosystem I assembly protein ycf4 [Daucus carota]
           gi|122221309|sp|Q0G9V1.1|YCF4_DAUCA RecName:
           Full=Photosystem I assembly protein Ycf4
           gi|113200919|gb|ABI32435.1| photosystem I assembly
           protein ycf4 [Daucus carota]
          Length = 184

 Score =  123 bits (308), Expect = 4e-26
 Identities = 61/66 (92%), Positives = 65/66 (98%)
 Frame = +3

Query: 3   RLIIKDIQSVRIEVKKGIYARRVLYMDIRGRGAIPLTRTDENLTPREIEQKAAELAYFLR 182
           R +IKDIQSVRIEVK+GIYARRVLYMDIRG+GAIPLTRTDEN+TPREIEQKAAELAYFLR
Sbjct: 119 RFLIKDIQSVRIEVKEGIYARRVLYMDIRGQGAIPLTRTDENVTPREIEQKAAELAYFLR 178

Query: 183 VPIEVF 200
           VPIEVF
Sbjct: 179 VPIEVF 184