BLASTX nr result

ID: Rehmannia24_contig00029295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00029295
         (406 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEI98633.1| hypothetical protein 111O18.20 [Coffea canephora]       60   2e-07
ref|XP_002267239.2| PREDICTED: ATP-dependent DNA helicase DDM1-l...    58   1e-06
emb|CBI17533.3| unnamed protein product [Vitis vinifera]               58   1e-06
ref|XP_006340599.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...    56   4e-06
gb|EXC35516.1| ATP-dependent DNA helicase DDM1 [Morus notabilis]       55   7e-06
emb|CAN81246.1| hypothetical protein VITISV_014031 [Vitis vinifera]    55   7e-06
ref|XP_004232396.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...    55   1e-05
ref|XP_002521606.1| ISWI chromatin remodeling complex ATPase ISW...    55   1e-05

>gb|AEI98633.1| hypothetical protein 111O18.20 [Coffea canephora]
          Length = 744

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 34/54 (62%), Positives = 41/54 (75%), Gaps = 3/54 (5%)
 Frame = +1

Query: 154 MVAENEVKSEPAADSPTSVLEDED-CKDNLDVKLEVE--VDGENGDCSLVSKTM 306
           MVAEN VK EP ADSPTSVLEDED CK+   VK+E E  +D + GD SL+++TM
Sbjct: 1   MVAENGVKDEPQADSPTSVLEDEDACKEKNCVKMEGELLLDAKYGDSSLITETM 54


>ref|XP_002267239.2| PREDICTED: ATP-dependent DNA helicase DDM1-like [Vitis vinifera]
          Length = 759

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 36/89 (40%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
 Frame = +1

Query: 154 MVAENEVKSEPAADSPTSVLEDED-CKDNLDVKLEVEV----DGENGDCSLVSKTMXXXX 318
           MV  NEVK + +ADSPTSVLEDE  C++ + VK+E ++    D +NGD SL+S TM    
Sbjct: 1   MVPGNEVKDDASADSPTSVLEDEGICEEKIKVKMEDDILHPLDAKNGDSSLISGTMAKEE 60

Query: 319 XXXXXXXXXXXXXXXXXXXXXPQLNDVQF 405
                                P LND QF
Sbjct: 61  EMLMKERVKEEDAEQVVTQEAPHLNDSQF 89


>emb|CBI17533.3| unnamed protein product [Vitis vinifera]
          Length = 800

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 36/89 (40%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
 Frame = +1

Query: 154 MVAENEVKSEPAADSPTSVLEDED-CKDNLDVKLEVEV----DGENGDCSLVSKTMXXXX 318
           MV  NEVK + +ADSPTSVLEDE  C++ + VK+E ++    D +NGD SL+S TM    
Sbjct: 1   MVPGNEVKDDASADSPTSVLEDEGICEEKIKVKMEDDILHPLDAKNGDSSLISGTMAKEE 60

Query: 319 XXXXXXXXXXXXXXXXXXXXXPQLNDVQF 405
                                P LND QF
Sbjct: 61  EMLMKERVKEEDAEQVVTQEAPHLNDSQF 89


>ref|XP_006340599.1| PREDICTED: ATP-dependent DNA helicase DDM1-like isoform X1 [Solanum
           tuberosum] gi|565347157|ref|XP_006340600.1| PREDICTED:
           ATP-dependent DNA helicase DDM1-like isoform X2 [Solanum
           tuberosum]
          Length = 760

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 37/87 (42%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
 Frame = +1

Query: 154 MVAENEVKSEPAADSPTSVLEDED-CKDNLDVKLEVEV--DGENGDCSLVSKTMXXXXXX 324
           MVA+  VK    ADSP SVLEDED CK++L VKLE EV  D ENGD + + + M      
Sbjct: 1   MVADEGVKDRTVADSPVSVLEDEDTCKEDLAVKLEEEVSLDPENGDATHIPENMAKEEEI 60

Query: 325 XXXXXXXXXXXXXXXXXXXPQLNDVQF 405
                              P LND QF
Sbjct: 61  LIRARAKEEEEQLNNLKEAPILNDTQF 87


>gb|EXC35516.1| ATP-dependent DNA helicase DDM1 [Morus notabilis]
          Length = 875

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 29/53 (54%), Positives = 40/53 (75%), Gaps = 3/53 (5%)
 Frame = +1

Query: 157 VAENEVKSEPAADSPTSVLEDED-CKDNLDVKLEVE--VDGENGDCSLVSKTM 306
           + ++E+K+E  A+SPTSVLEDED C + ++VKLE E  VDG+NGD  L+S  M
Sbjct: 116 MGDDEMKNEVVAESPTSVLEDEDICNEKVEVKLEEEILVDGKNGDSLLISTAM 168


>emb|CAN81246.1| hypothetical protein VITISV_014031 [Vitis vinifera]
          Length = 716

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 30/56 (53%), Positives = 40/56 (71%), Gaps = 5/56 (8%)
 Frame = +1

Query: 154 MVAENEVKSEPAADSPTSVLEDED-CKDNLDVKLEVEV----DGENGDCSLVSKTM 306
           MV  NEVK + +ADSPTSVLEDE  C++ + VK+E ++    D +NGD SL+S TM
Sbjct: 1   MVPGNEVKDDASADSPTSVLEDEGICEEKIKVKMEDDILXPLDAKNGDSSLISGTM 56


>ref|XP_004232396.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Solanum
           lycopersicum]
          Length = 759

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 36/87 (41%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
 Frame = +1

Query: 154 MVAENEVKSEPAADSPTSVLEDED-CKDNLDVKLEVEVD--GENGDCSLVSKTMXXXXXX 324
           MVA+  VK    ADSP SVLEDED CK++L VKLE EV    ENGD + + + M      
Sbjct: 1   MVADEGVKDRAVADSPVSVLEDEDTCKEDLTVKLEEEVSLYSENGDATHIPENMAKEEEI 60

Query: 325 XXXXXXXXXXXXXXXXXXXPQLNDVQF 405
                              P LND QF
Sbjct: 61  LIKTRAKEEEEQLNNLKEVPILNDTQF 87


>ref|XP_002521606.1| ISWI chromatin remodeling complex ATPase ISW1, putative [Ricinus
           communis] gi|223539284|gb|EEF40877.1| ISWI chromatin
           remodeling complex ATPase ISW1, putative [Ricinus
           communis]
          Length = 788

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/54 (50%), Positives = 43/54 (79%), Gaps = 3/54 (5%)
 Frame = +1

Query: 154 MVAENEVKSEPAADSPTSVLEDED-CKDN--LDVKLEVEVDGENGDCSLVSKTM 306
           M AE+E+K++ +ADSPTSVLEDE+ CK+   +D++ ++ +D +NGD SL+S+ M
Sbjct: 34  MAAESEMKNDASADSPTSVLEDEEKCKEKTVIDLEKDILLDAKNGDISLLSRAM 87


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