BLASTX nr result

ID: Rehmannia24_contig00029142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00029142
         (401 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75301.1| hypothetical protein VITISV_008678 [Vitis vinifera]    50   9e-08
ref|XP_006601387.1| PREDICTED: uncharacterized protein LOC102661...    50   1e-05

>emb|CAN75301.1| hypothetical protein VITISV_008678 [Vitis vinifera]
          Length = 248

 Score = 50.4 bits (119), Expect(2) = 9e-08
 Identities = 25/48 (52%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
 Frame = -2

Query: 334 HSPSAPQV--MAATTYSTADNSWYIDSGASAHVTSELGNLSLKSPYHG 197
           H+P   Q   + AT    +D SWY DSGA+ HV +ELGNL +KS YHG
Sbjct: 125 HAPQNNQASTLIATPELVSDQSWYDDSGATNHVIAELGNLLMKSNYHG 172



 Score = 31.2 bits (69), Expect(2) = 9e-08
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -1

Query: 176 DKSTNQILLKGALKGGLYQLDLSHLSAHVK 87
           DK  +Q+LL+G L+ GLY+L +     H K
Sbjct: 198 DKENHQVLLQGKLEDGLYKLHIYETKNHTK 227


>ref|XP_006601387.1| PREDICTED: uncharacterized protein LOC102661841 [Glycine max]
          Length = 550

 Score = 50.1 bits (118), Expect(2) = 1e-05
 Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
 Frame = -2

Query: 373 SPVAQAHLSEMSQHSP--SAPQVMAATTYSTADNSWYIDSGASAHVTSELGNLSLKSPYH 200
           +P+   + S + Q +P  S PQ M A T ++  ++WY DSGAS HVTS + N+   +P+ 
Sbjct: 227 APMIANYASSLPQPAPTSSTPQAMLAGTSTSPSSNWYPDSGASHHVTSNVQNIQQCAPFE 286

Query: 199 GS 194
           GS
Sbjct: 287 GS 288



 Score = 24.6 bits (52), Expect(2) = 1e-05
 Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
 Frame = -1

Query: 176 DKSTNQILLKGALKG-GLYQLD--LSHLSAHVKXXXXXXXXXXXLKQCNVVSTSSL--DV 12
           D+ +N+ILLKG L   GLY     LS  S+ VK               N  S  S+  + 
Sbjct: 289 DQGSNEILLKGRLSSDGLYTFPSLLSSPSSKVKTNSLRTSSILPHAIVNSASVHSITANT 348

Query: 11  WH 6
           WH
Sbjct: 349 WH 350


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