BLASTX nr result
ID: Rehmannia24_contig00029001
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00029001
(583 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus comm... 155 6e-36
ref|XP_006341754.1| PREDICTED: DNA polymerase alpha subunit B-li... 154 1e-35
ref|XP_004239184.1| PREDICTED: DNA polymerase alpha subunit B-li... 154 1e-35
ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [V... 154 1e-35
ref|XP_006378282.1| DNA polymerase alpha subunit B family protei... 152 5e-35
ref|XP_004137446.1| PREDICTED: DNA polymerase alpha subunit B-li... 150 2e-34
ref|XP_006484041.1| PREDICTED: DNA polymerase alpha subunit B-li... 146 3e-33
ref|XP_004310044.1| PREDICTED: DNA polymerase alpha subunit B-li... 146 4e-33
gb|EMJ25471.1| hypothetical protein PRUPE_ppa018609mg [Prunus pe... 145 6e-33
ref|XP_006438110.1| hypothetical protein CICLE_v10030973mg [Citr... 145 7e-33
gb|EOY00828.1| DNA polymerase alpha 2 [Theobroma cacao] 143 3e-32
gb|EPS73745.1| hypothetical protein M569_01012 [Genlisea aurea] 139 4e-31
ref|XP_003552790.1| PREDICTED: DNA polymerase alpha subunit B-li... 138 9e-31
ref|XP_006391243.1| hypothetical protein EUTSA_v10018287mg [Eutr... 136 5e-30
ref|NP_176930.2| DNA polymerase alpha 2 [Arabidopsis thaliana] g... 135 8e-30
dbj|BAC43176.1| putative DNA polymerase alpha subunit [Arabidops... 134 2e-29
ref|XP_003601821.1| DNA polymerase alpha subunit B [Medicago tru... 132 5e-29
gb|ESW35722.1| hypothetical protein PHAVU_001G259300g [Phaseolus... 132 7e-29
ref|XP_002888612.1| DNA polymerase alpha subunit B family [Arabi... 132 7e-29
ref|XP_006591473.1| PREDICTED: DNA polymerase alpha subunit B-li... 132 9e-29
>ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus communis]
gi|223546049|gb|EEF47552.1| alpha DNA polymerase,
putative [Ricinus communis]
Length = 621
Score = 155 bits (393), Expect = 6e-36
Identities = 69/98 (70%), Positives = 85/98 (86%)
Frame = +2
Query: 2 LTNLAKHILNQHSFYPLYPPAEDIPLDFSLANKALHFSSIPDILILPSDLAHFVKVLSLG 181
++ LA HIL+Q SFYPLYPPAED+PLDFSLA +ALH S+P ILI+PSD+ +F+KVLSLG
Sbjct: 515 MSRLANHILSQRSFYPLYPPAEDVPLDFSLAPEALHIPSVPHILIVPSDMKYFIKVLSLG 574
Query: 182 EENDGEEQLKCICVNPGRLARGEGGGFFVEINYRGNPD 295
+GEEQ KC+C+NPGRLA+GEGGG FVE+NYRG+PD
Sbjct: 575 GRIEGEEQTKCVCINPGRLAKGEGGGTFVELNYRGSPD 612
>ref|XP_006341754.1| PREDICTED: DNA polymerase alpha subunit B-like [Solanum tuberosum]
Length = 617
Score = 154 bits (390), Expect = 1e-35
Identities = 72/98 (73%), Positives = 86/98 (87%)
Frame = +2
Query: 2 LTNLAKHILNQHSFYPLYPPAEDIPLDFSLANKALHFSSIPDILILPSDLAHFVKVLSLG 181
+T LA HILNQ SFYPLYPPAE +P+DFSLA +AL S+ PDILILPSDLAHFV+V+SLG
Sbjct: 512 MTTLANHILNQRSFYPLYPPAEGVPIDFSLAPEALQMSTAPDILILPSDLAHFVRVISLG 571
Query: 182 EENDGEEQLKCICVNPGRLARGEGGGFFVEINYRGNPD 295
E ++GEE +KCICVNPGRL+RGEGGGFF+E+NY G+ D
Sbjct: 572 ERSEGEE-VKCICVNPGRLSRGEGGGFFMELNYHGSCD 608
>ref|XP_004239184.1| PREDICTED: DNA polymerase alpha subunit B-like [Solanum
lycopersicum]
Length = 617
Score = 154 bits (390), Expect = 1e-35
Identities = 73/98 (74%), Positives = 86/98 (87%)
Frame = +2
Query: 2 LTNLAKHILNQHSFYPLYPPAEDIPLDFSLANKALHFSSIPDILILPSDLAHFVKVLSLG 181
+T LA HILNQ SFYPLYPPAE +P+DFSLA +AL S+ PDILILPSDLAHFV+V+SLG
Sbjct: 512 MTTLANHILNQRSFYPLYPPAEGVPIDFSLAPEALQMSTDPDILILPSDLAHFVRVVSLG 571
Query: 182 EENDGEEQLKCICVNPGRLARGEGGGFFVEINYRGNPD 295
E ++GEE +KCICVNPGRL+RGEGGGFFVE+NY G+ D
Sbjct: 572 ERSEGEE-VKCICVNPGRLSRGEGGGFFVELNYHGSCD 608
>ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [Vitis vinifera]
gi|297738371|emb|CBI27572.3| unnamed protein product
[Vitis vinifera]
Length = 623
Score = 154 bits (390), Expect = 1e-35
Identities = 73/98 (74%), Positives = 85/98 (86%)
Frame = +2
Query: 2 LTNLAKHILNQHSFYPLYPPAEDIPLDFSLANKALHFSSIPDILILPSDLAHFVKVLSLG 181
+T +A HIL+Q SFYPLYP AE IPLDFSLA +AL S+IPD+LILPSDLA FVKVLSLG
Sbjct: 517 MTTIANHILSQRSFYPLYPLAEGIPLDFSLAPEALEVSTIPDVLILPSDLASFVKVLSLG 576
Query: 182 EENDGEEQLKCICVNPGRLARGEGGGFFVEINYRGNPD 295
N+GEE +KCICVNPGRLA+GEGGG FVE+NY+G+PD
Sbjct: 577 GRNEGEELVKCICVNPGRLAKGEGGGHFVELNYQGSPD 614
>ref|XP_006378282.1| DNA polymerase alpha subunit B family protein [Populus trichocarpa]
gi|550329229|gb|ERP56079.1| DNA polymerase alpha subunit
B family protein [Populus trichocarpa]
Length = 618
Score = 152 bits (385), Expect = 5e-35
Identities = 70/98 (71%), Positives = 86/98 (87%)
Frame = +2
Query: 2 LTNLAKHILNQHSFYPLYPPAEDIPLDFSLANKALHFSSIPDILILPSDLAHFVKVLSLG 181
++ LA HI++Q SFYPLYPPAED+PLDFSLA +ALH +SIPDILILPSD+ +F+KVL+LG
Sbjct: 515 MSRLANHIISQRSFYPLYPPAEDVPLDFSLAPEALHINSIPDILILPSDMKYFMKVLTLG 574
Query: 182 EENDGEEQLKCICVNPGRLARGEGGGFFVEINYRGNPD 295
E GEEQ KCIC+NPGRLA+GEGGG F E+NY+G+PD
Sbjct: 575 E---GEEQRKCICINPGRLAKGEGGGTFAELNYQGSPD 609
>ref|XP_004137446.1| PREDICTED: DNA polymerase alpha subunit B-like [Cucumis sativus]
gi|449486914|ref|XP_004157440.1| PREDICTED: DNA
polymerase alpha subunit B-like [Cucumis sativus]
Length = 622
Score = 150 bits (380), Expect = 2e-34
Identities = 71/98 (72%), Positives = 80/98 (81%)
Frame = +2
Query: 2 LTNLAKHILNQHSFYPLYPPAEDIPLDFSLANKALHFSSIPDILILPSDLAHFVKVLSLG 181
L+ LA HIL Q SFYPLYPPAE +PLDFSLA +AL S IPDILILPSD+ HFVKV+SLG
Sbjct: 516 LSTLASHILRQRSFYPLYPPAEGVPLDFSLAPQALDISVIPDILILPSDMKHFVKVISLG 575
Query: 182 EENDGEEQLKCICVNPGRLARGEGGGFFVEINYRGNPD 295
E EEQ +C+CVNPGRLA+GEGGG FVE+NY G PD
Sbjct: 576 EGGSEEEQARCVCVNPGRLAKGEGGGTFVELNYFGRPD 613
>ref|XP_006484041.1| PREDICTED: DNA polymerase alpha subunit B-like [Citrus sinensis]
Length = 620
Score = 146 bits (369), Expect = 3e-33
Identities = 68/95 (71%), Positives = 79/95 (83%)
Frame = +2
Query: 11 LAKHILNQHSFYPLYPPAEDIPLDFSLANKALHFSSIPDILILPSDLAHFVKVLSLGEEN 190
LA HI NQ SFYPLYPPAE IPLDFSLA +AL S+IPDI+ILPSD+ +F+KVLSLG N
Sbjct: 517 LANHIPNQRSFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRN 576
Query: 191 DGEEQLKCICVNPGRLARGEGGGFFVEINYRGNPD 295
+GEEQ KC+CVNPGRLA+GEG G F EI Y G+P+
Sbjct: 577 EGEEQKKCVCVNPGRLAKGEGSGTFAEIYYHGSPE 611
>ref|XP_004310044.1| PREDICTED: DNA polymerase alpha subunit B-like [Fragaria vesca
subsp. vesca]
Length = 620
Score = 146 bits (368), Expect = 4e-33
Identities = 71/98 (72%), Positives = 82/98 (83%)
Frame = +2
Query: 2 LTNLAKHILNQHSFYPLYPPAEDIPLDFSLANKALHFSSIPDILILPSDLAHFVKVLSLG 181
++ LA HIL Q SFYPLYPPAE +PLDFSLA +AL+ S IPDILILPSDL +FVKVLSLG
Sbjct: 517 MSRLANHILGQRSFYPLYPPAESVPLDFSLAPEALNISLIPDILILPSDLKYFVKVLSLG 576
Query: 182 EENDGEEQLKCICVNPGRLARGEGGGFFVEINYRGNPD 295
E GE +KCICVNPGRL++GEGGG FVE+NY G+PD
Sbjct: 577 E---GEPPVKCICVNPGRLSKGEGGGTFVELNYYGSPD 611
>gb|EMJ25471.1| hypothetical protein PRUPE_ppa018609mg [Prunus persica]
Length = 612
Score = 145 bits (367), Expect = 6e-33
Identities = 71/98 (72%), Positives = 82/98 (83%)
Frame = +2
Query: 2 LTNLAKHILNQHSFYPLYPPAEDIPLDFSLANKALHFSSIPDILILPSDLAHFVKVLSLG 181
++ LA HI++Q SFYPLYPPAE IPLDFSLA +AL+ S IPDILILPSD+ HFVKV G
Sbjct: 509 MSRLANHIISQRSFYPLYPPAEGIPLDFSLAPEALNISLIPDILILPSDMKHFVKVKWSG 568
Query: 182 EENDGEEQLKCICVNPGRLARGEGGGFFVEINYRGNPD 295
EE +EQ+KCICVNPGRLA+GEGGG FVE+NY GNPD
Sbjct: 569 EE---KEQVKCICVNPGRLAKGEGGGTFVELNYYGNPD 603
>ref|XP_006438110.1| hypothetical protein CICLE_v10030973mg [Citrus clementina]
gi|557540306|gb|ESR51350.1| hypothetical protein
CICLE_v10030973mg [Citrus clementina]
Length = 620
Score = 145 bits (366), Expect = 7e-33
Identities = 67/95 (70%), Positives = 79/95 (83%)
Frame = +2
Query: 11 LAKHILNQHSFYPLYPPAEDIPLDFSLANKALHFSSIPDILILPSDLAHFVKVLSLGEEN 190
LA HI NQ SFYPLYPPAE IPLDFSLA +AL S+IPDI+ILPSD+ +F+KVLSLG N
Sbjct: 517 LANHIPNQRSFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRN 576
Query: 191 DGEEQLKCICVNPGRLARGEGGGFFVEINYRGNPD 295
+GEEQ +C+CVNPGRLA+GEG G F EI Y G+P+
Sbjct: 577 EGEEQKRCVCVNPGRLAKGEGSGTFAEIYYHGSPE 611
>gb|EOY00828.1| DNA polymerase alpha 2 [Theobroma cacao]
Length = 621
Score = 143 bits (361), Expect = 3e-32
Identities = 67/99 (67%), Positives = 83/99 (83%), Gaps = 1/99 (1%)
Frame = +2
Query: 2 LTNLAKHILNQHSFYPLYPPAEDIPLDFSLANKALHFSSIPDILILPSDLAHFVKVLSLG 181
L+ LA HIL+Q SFYPLYPPAE +PLD SLA +ALH S+PD+LILPSD+ +FVKVLSLG
Sbjct: 514 LSRLASHILSQRSFYPLYPPAEGVPLDSSLAPEALHIPSVPDLLILPSDIKYFVKVLSLG 573
Query: 182 EENDGEEQL-KCICVNPGRLARGEGGGFFVEINYRGNPD 295
++G+EQ KCIC+NPGRLA+G GGG FVE+ Y+G+PD
Sbjct: 574 GTSEGKEQTKKCICINPGRLAKGAGGGTFVELKYQGSPD 612
>gb|EPS73745.1| hypothetical protein M569_01012 [Genlisea aurea]
Length = 595
Score = 139 bits (351), Expect = 4e-31
Identities = 67/104 (64%), Positives = 79/104 (75%), Gaps = 7/104 (6%)
Frame = +2
Query: 2 LTNLAKHILNQHSFYPLYPPAEDIPLDFSLANKALHFSSIPDILILPSDLAHFVKVLSLG 181
L NLA+HILNQ +FYPLYPPAED+PLDFSLA + L SSIPDIL+LPSDLA FVK++ LG
Sbjct: 482 LNNLARHILNQQNFYPLYPPAEDLPLDFSLAKEGLKISSIPDILVLPSDLAQFVKIICLG 541
Query: 182 EENDGEEQL-------KCICVNPGRLARGEGGGFFVEINYRGNP 292
EE G + +CICVNPGRLARG GGGFF ++ + NP
Sbjct: 542 EERCGGGERPPPPPPPQCICVNPGRLARGNGGGFFAKVEFINNP 585
>ref|XP_003552790.1| PREDICTED: DNA polymerase alpha subunit B-like [Glycine max]
Length = 606
Score = 138 bits (348), Expect = 9e-31
Identities = 69/98 (70%), Positives = 78/98 (79%)
Frame = +2
Query: 2 LTNLAKHILNQHSFYPLYPPAEDIPLDFSLANKALHFSSIPDILILPSDLAHFVKVLSLG 181
L+ LA HILNQ SFYPLYPPAE +PLDFSLA +AL SSIPDILILPSD+ +FVKVLS
Sbjct: 502 LSRLANHILNQQSFYPLYPPAEGVPLDFSLAPEALQLSSIPDILILPSDIKYFVKVLS-- 559
Query: 182 EENDGEEQLKCICVNPGRLARGEGGGFFVEINYRGNPD 295
EN+G KCI VNPGRLA+GEGGG FVE++Y G D
Sbjct: 560 SENEGINHTKCIAVNPGRLAKGEGGGTFVELDYCGGSD 597
>ref|XP_006391243.1| hypothetical protein EUTSA_v10018287mg [Eutrema salsugineum]
gi|557087677|gb|ESQ28529.1| hypothetical protein
EUTSA_v10018287mg [Eutrema salsugineum]
Length = 622
Score = 136 bits (342), Expect = 5e-30
Identities = 63/98 (64%), Positives = 79/98 (80%)
Frame = +2
Query: 2 LTNLAKHILNQHSFYPLYPPAEDIPLDFSLANKALHFSSIPDILILPSDLAHFVKVLSLG 181
++ LA H+L Q SFYPLYPP E +P D +LA KAL SSIPDIL+LPSD+ +FVKVLSLG
Sbjct: 519 MSRLASHLLRQRSFYPLYPPPESLPYDSTLAPKALQISSIPDILLLPSDMRYFVKVLSLG 578
Query: 182 EENDGEEQLKCICVNPGRLARGEGGGFFVEINYRGNPD 295
E GE+ +KC+CVNPGRLA+GEG G FVE++Y+G P+
Sbjct: 579 E---GEDAVKCVCVNPGRLAKGEGAGTFVELSYKGGPE 613
>ref|NP_176930.2| DNA polymerase alpha 2 [Arabidopsis thaliana]
gi|332196552|gb|AEE34673.1| DNA polymerase alpha 2
[Arabidopsis thaliana]
Length = 620
Score = 135 bits (340), Expect = 8e-30
Identities = 63/98 (64%), Positives = 77/98 (78%)
Frame = +2
Query: 2 LTNLAKHILNQHSFYPLYPPAEDIPLDFSLANKALHFSSIPDILILPSDLAHFVKVLSLG 181
++ LA H+L Q SFYPLYPP E +P D SLA KAL SSIPDIL+LPSD+ +FVK+LSLG
Sbjct: 517 MSRLASHLLRQRSFYPLYPPPESLPYDSSLAPKALQISSIPDILLLPSDMRYFVKILSLG 576
Query: 182 EENDGEEQLKCICVNPGRLARGEGGGFFVEINYRGNPD 295
EE E+ KC+CVNPGRLA+GEG G FVE+ Y+G P+
Sbjct: 577 EE---EDAAKCVCVNPGRLAKGEGAGTFVELTYKGGPE 611
>dbj|BAC43176.1| putative DNA polymerase alpha subunit [Arabidopsis thaliana]
gi|29028994|gb|AAO64876.1| At1g67630 [Arabidopsis
thaliana]
Length = 620
Score = 134 bits (337), Expect = 2e-29
Identities = 62/98 (63%), Positives = 77/98 (78%)
Frame = +2
Query: 2 LTNLAKHILNQHSFYPLYPPAEDIPLDFSLANKALHFSSIPDILILPSDLAHFVKVLSLG 181
++ LA H+L Q SFYPLYPP E +P D SLA KAL SSIPDIL+LPSD+ +FVK+LSLG
Sbjct: 517 MSRLASHLLRQRSFYPLYPPPESLPYDSSLAPKALQISSIPDILLLPSDMRYFVKILSLG 576
Query: 182 EENDGEEQLKCICVNPGRLARGEGGGFFVEINYRGNPD 295
EE E+ KC+CVNPGRLA+GEG G +VE+ Y+G P+
Sbjct: 577 EE---EDAAKCVCVNPGRLAKGEGAGTYVELTYKGGPE 611
>ref|XP_003601821.1| DNA polymerase alpha subunit B [Medicago truncatula]
gi|355490869|gb|AES72072.1| DNA polymerase alpha subunit
B [Medicago truncatula]
Length = 616
Score = 132 bits (333), Expect = 5e-29
Identities = 66/100 (66%), Positives = 79/100 (79%), Gaps = 2/100 (2%)
Frame = +2
Query: 2 LTNLAKHILNQHSFYPLYPPAEDIPLDFSLANKALHFSSIPDILILPSDLAHFVKVLSLG 181
L+ LA HILNQ SFYPLYPPAE +PLDFSLA +AL +PD+LILPSDL +FVKVL
Sbjct: 512 LSRLANHILNQQSFYPLYPPAESVPLDFSLAPEALQLPLVPDVLILPSDLKYFVKVL--- 568
Query: 182 EENDGEE--QLKCICVNPGRLARGEGGGFFVEINYRGNPD 295
+N+GEE ++KCI VNPGRLA+GEGGG FVE++Y G D
Sbjct: 569 -DNEGEETNRMKCIAVNPGRLAKGEGGGTFVELDYSGGLD 607
>gb|ESW35722.1| hypothetical protein PHAVU_001G259300g [Phaseolus vulgaris]
Length = 625
Score = 132 bits (332), Expect = 7e-29
Identities = 63/98 (64%), Positives = 74/98 (75%)
Frame = +2
Query: 2 LTNLAKHILNQHSFYPLYPPAEDIPLDFSLANKALHFSSIPDILILPSDLAHFVKVLSLG 181
++ LA HILNQ SFYPLYPPAE +PLDFSLA +AL S +PDILILPSD+ +FVK+LS
Sbjct: 519 MSRLANHILNQQSFYPLYPPAESVPLDFSLAPEALQLSLVPDILILPSDIKYFVKMLSSE 578
Query: 182 EENDGEEQLKCICVNPGRLARGEGGGFFVEINYRGNPD 295
E KCI VNPGRLA+GEGGG FVE++Y G D
Sbjct: 579 SEGINNSNSKCIAVNPGRLAKGEGGGTFVELHYGGGSD 616
>ref|XP_002888612.1| DNA polymerase alpha subunit B family [Arabidopsis lyrata subsp.
lyrata] gi|297334453|gb|EFH64871.1| DNA polymerase alpha
subunit B family [Arabidopsis lyrata subsp. lyrata]
Length = 619
Score = 132 bits (332), Expect = 7e-29
Identities = 62/98 (63%), Positives = 75/98 (76%)
Frame = +2
Query: 2 LTNLAKHILNQHSFYPLYPPAEDIPLDFSLANKALHFSSIPDILILPSDLAHFVKVLSLG 181
++ LA H+L Q SFYPLYPP E +P D SLA KAL SIPDIL+LPSD+ +FVK+LSLG
Sbjct: 516 MSRLASHLLRQRSFYPLYPPPESLPYDSSLAPKALQILSIPDILLLPSDMRYFVKILSLG 575
Query: 182 EENDGEEQLKCICVNPGRLARGEGGGFFVEINYRGNPD 295
EE E KC+CVNPGRLA+GEG G FVE+ Y+G P+
Sbjct: 576 EE---ENAAKCVCVNPGRLAKGEGAGTFVELTYKGGPE 610
>ref|XP_006591473.1| PREDICTED: DNA polymerase alpha subunit B-like isoform X2 [Glycine
max]
Length = 577
Score = 132 bits (331), Expect = 9e-29
Identities = 65/98 (66%), Positives = 76/98 (77%)
Frame = +2
Query: 2 LTNLAKHILNQHSFYPLYPPAEDIPLDFSLANKALHFSSIPDILILPSDLAHFVKVLSLG 181
L+ LA HILNQ SFYPLY PAE +PLDFSLA +AL S +PDILILPSD+ +FVKVLS
Sbjct: 473 LSRLANHILNQQSFYPLYTPAESVPLDFSLAPEALQLSFVPDILILPSDIKYFVKVLS-- 530
Query: 182 EENDGEEQLKCICVNPGRLARGEGGGFFVEINYRGNPD 295
EN+G KCI +NPGRLA+GEGGG FVE++Y G D
Sbjct: 531 SENEGINHTKCIAINPGRLAKGEGGGTFVELDYCGASD 568