BLASTX nr result

ID: Rehmannia24_contig00028499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00028499
         (500 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006348118.1| PREDICTED: uncharacterized protein LOC102596...    84   2e-14
gb|EOY01475.1| Uncharacterized protein TCM_011348 [Theobroma cacao]    64   3e-08
emb|CAN68680.1| hypothetical protein VITISV_041943 [Vitis vinifera]    62   8e-08
gb|EXC01251.1| hypothetical protein L484_002813 [Morus notabilis]      62   1e-07
ref|XP_006595225.1| PREDICTED: uncharacterized protein LOC102660...    60   3e-07
ref|XP_006595226.1| PREDICTED: uncharacterized protein LOC102660...    59   9e-07
ref|XP_006447557.1| hypothetical protein CICLE_v10017196mg [Citr...    59   9e-07
ref|XP_003596984.1| Rhomboid family member [Medicago truncatula]...    58   1e-06
gb|ESW13079.1| hypothetical protein PHAVU_008G166200g [Phaseolus...    56   6e-06
gb|EOY12331.1| SH3 domain-binding protein 1, putative [Theobroma...    56   6e-06
ref|XP_004289169.1| PREDICTED: uncharacterized protein LOC101299...    56   6e-06

>ref|XP_006348118.1| PREDICTED: uncharacterized protein LOC102596890 [Solanum tuberosum]
          Length = 98

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 50/98 (51%), Positives = 68/98 (69%), Gaps = 1/98 (1%)
 Frame = +2

Query: 107 VRSCSIRSPLSTPSFYTYLKPGALAQLRYSKMTARSKEIGAQTLLALCQLQSTPFAEPHS 286
           +R+ + RS  +TPSF+TYLKPGALAQLRYSK++A+S+   AQ+   +  L   P + P  
Sbjct: 5   IRTRTSRS--ATPSFHTYLKPGALAQLRYSKISAKSRLKNAQSYQHI-PLSVIPSSVPLP 61

Query: 287 TGFSMDGIPCFNVRVK-SQPRCLQRKKLVAVTPFFTET 397
           T   M+G+PCFN  ++  QPR +QRKKL AV P FTE+
Sbjct: 62  T---MEGLPCFNSSIRIRQPRFIQRKKLSAVAPIFTES 96


>gb|EOY01475.1| Uncharacterized protein TCM_011348 [Theobroma cacao]
          Length = 198

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 40/91 (43%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
 Frame = +2

Query: 104 RVRSCSIRSPLSTPSFYTYLKPGALAQLRYSKMTARSKEIGAQTLLALCQLQSTPFAEPH 283
           R RS +  S   T +F  YLKPGALA+LR S+++ARS  I +   L      S P     
Sbjct: 84  RTRSLARHSLTGTETFLKYLKPGALARLRDSRISARSHRISS---LFQISPSSPPSGGGQ 140

Query: 284 STGFSMDGIPCFNVRVKSQ-PRCLQRKKLVA 373
           +   S+DG PCF    +   PRCLQRKKL+A
Sbjct: 141 TFSASIDGFPCFAATARVYGPRCLQRKKLLA 171


>emb|CAN68680.1| hypothetical protein VITISV_041943 [Vitis vinifera]
          Length = 124

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 39/98 (39%), Positives = 54/98 (55%)
 Frame = +2

Query: 104 RVRSCSIRSPLSTPSFYTYLKPGALAQLRYSKMTARSKEIGAQTLLALCQLQSTPFAEPH 283
           R+R     S     +F+ YLKPGALAQLR S+++ARS  + + + + L +  S P +   
Sbjct: 4   RIRXLHRSSSKRDEAFHRYLKPGALAQLRDSRISARSHRVDSHSQIHLHRTSSPPSSPLP 63

Query: 284 STGFSMDGIPCFNVRVKSQPRCLQRKKLVAVTPFFTET 397
                +D  PCF  R    PRCLQRKKLVA    F ++
Sbjct: 64  P---QIDAFPCFAGR-NYGPRCLQRKKLVAAKSVFLKS 97


>gb|EXC01251.1| hypothetical protein L484_002813 [Morus notabilis]
          Length = 126

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 41/91 (45%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
 Frame = +2

Query: 104 RVRSCSIRSPLSTPSFYTYLKPGALAQLRYSKMTARSKEIGAQTLLALCQLQSTPFAEPH 283
           R R+    SP  T  F  YLKPGALA++R S+++ARS    A + + L    S P   P 
Sbjct: 4   RTRAVHRSSPSRTEPFLKYLKPGALARIRDSRISARSHRAIALSQIRLSPPSSPPPPTPG 63

Query: 284 STGFS-MDGIPCFNVRVKSQPRCLQRKKLVA 373
               S MD  PCF+ R    PRC QRKKLVA
Sbjct: 64  QLPVSVMDVFPCFSPRFYG-PRCPQRKKLVA 93


>ref|XP_006595225.1| PREDICTED: uncharacterized protein LOC102660639 [Glycine max]
          Length = 118

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 40/95 (42%), Positives = 54/95 (56%), Gaps = 14/95 (14%)
 Frame = +2

Query: 149 FYTYLKPGALAQLRYSKMTARSKEIG---AQTLLALCQLQSTPFAEPHSTGFSM------ 301
           F+ +LKPGALA+LR SK+T+   +I     Q  L+   L S+P +   S+  S       
Sbjct: 17  FHKFLKPGALAKLRDSKITSSRHKINRRITQISLSHLLLSSSPSSSSSSSSSSSIQQDQP 76

Query: 302 ----DGIPCFNVRV-KSQPRCLQRKKLVAVTPFFT 391
               +GIPCF   +  ++PRCL RKKL AVTP FT
Sbjct: 77  LNQDNGIPCFTPPIYPNRPRCLVRKKLFAVTPNFT 111


>ref|XP_006595226.1| PREDICTED: uncharacterized protein LOC102660765 [Glycine max]
          Length = 116

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 41/104 (39%), Positives = 56/104 (53%), Gaps = 9/104 (8%)
 Frame = +2

Query: 113 SCSIRSPLSTPSFYT-YLKPGALAQLRYSKMTA----RSKEIGAQTLLALCQ---LQSTP 268
           S S  SP  +P  +  Y+KPGALA+LR SK+ A    + +      ++AL +   L  T 
Sbjct: 7   SKSTSSPRRSPRLFNKYMKPGALAKLRDSKINAARNNQQRTTTTTQIIALSEMLLLTPTS 66

Query: 269 FAEPHSTGFSMDGIPCFNVRVK-SQPRCLQRKKLVAVTPFFTET 397
            + P       +G+PCF+  V   +P CL RKKL AVTP FT T
Sbjct: 67  PSSPTQQYNEDNGVPCFDSAVNLHRPGCLSRKKLFAVTPTFTHT 110


>ref|XP_006447557.1| hypothetical protein CICLE_v10017196mg [Citrus clementina]
           gi|568830822|ref|XP_006469684.1| PREDICTED:
           uncharacterized protein LOC102609443 [Citrus sinensis]
           gi|557550168|gb|ESR60797.1| hypothetical protein
           CICLE_v10017196mg [Citrus clementina]
          Length = 122

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 39/92 (42%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
 Frame = +2

Query: 104 RVRSCSIRSPLSTPSFYTYLKPGALAQLRYSKMTARSKEIGAQTLLALCQLQ--STPFAE 277
           R+RS   +S   +  F  YLKPGALA+LR SK++ARS        L +C +   S P ++
Sbjct: 4   RIRSLHRKSITRSEPFLKYLKPGALARLRDSKISARS--------LRVCSIPQISPPSSD 55

Query: 278 PHSTGFSMDGIPCFNVRVKSQPRCLQRKKLVA 373
                  +D  PCF+ R+   PRC QRKKLVA
Sbjct: 56  GEPPVNVIDAFPCFSGRIYG-PRCPQRKKLVA 86


>ref|XP_003596984.1| Rhomboid family member [Medicago truncatula]
           gi|355486032|gb|AES67235.1| Rhomboid family member
           [Medicago truncatula]
          Length = 221

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
 Frame = +2

Query: 149 FYTYLKPGALAQLRYSKMTARSKEIGAQTLLALCQLQST-----PFAEPHSTGFSMDGIP 313
           F+ +LKPG LA+LR SK+TARS  + + + +++ +  ++     P  +P +T  S DG P
Sbjct: 13  FHKFLKPGTLARLRDSKITARSHRLNSLSQISIYRPPASPPPPPPSDQPQTTAVSADGFP 72

Query: 314 CFNVRVKSQPRCLQRKKLVAVTPFF 388
            F   +   PRC QRKKLVA    F
Sbjct: 73  SFFSGIYG-PRCPQRKKLVAAKSVF 96


>gb|ESW13079.1| hypothetical protein PHAVU_008G166200g [Phaseolus vulgaris]
          Length = 114

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 39/101 (38%), Positives = 53/101 (52%), Gaps = 13/101 (12%)
 Frame = +2

Query: 131 PLSTPS-------FYTYLKPGALAQLRYSKMTARSKEIGA-----QTLLALCQLQSTPFA 274
           P +TPS       F+ YLKPGALA++R SK+ AR+ E        + LL      S P  
Sbjct: 8   PTNTPSPRRSPRLFHKYLKPGALAKIRDSKIKARNNERTPKISLYEALLLTPPSPSLPTP 67

Query: 275 EPHSTGFSMDGIPCFNVRVK-SQPRCLQRKKLVAVTPFFTE 394
           +        +G+PCF  R+  + P  L+RKKL AVTP F +
Sbjct: 68  DDDQPLNQDNGVPCFISRLNLTSPSSLRRKKLFAVTPTFNQ 108


>gb|EOY12331.1| SH3 domain-binding protein 1, putative [Theobroma cacao]
          Length = 126

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 35/79 (44%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
 Frame = +2

Query: 146 SFYTYLKPGALAQLRYSKMTARSKEIGAQTLLALCQLQSTPFAEPHSTGFSM---DGIPC 316
           +F+ YLKPGALAQLR SK+ ARS ++ +       +L S P   P  T   +   D IP 
Sbjct: 12  AFHKYLKPGALAQLRDSKINARSHKLNS------VRLDSVPTQIPSQTQIQISDFDQIPR 65

Query: 317 FNVRVKSQPRCLQRKKLVA 373
           F  ++   P CLQRKKL+A
Sbjct: 66  FLNKIYGGPCCLQRKKLLA 84


>ref|XP_004289169.1| PREDICTED: uncharacterized protein LOC101299426 [Fragaria vesca
           subsp. vesca]
          Length = 127

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 41/98 (41%), Positives = 58/98 (59%), Gaps = 8/98 (8%)
 Frame = +2

Query: 104 RVRSCSIRS-PLSTPSFYTYLKPGALAQLRYSKM-TARSKEIGAQTLLALCQLQST-PFA 274
           R R+ + RS P  +  F  +LKPGALAQ+R S++ ++RS  I       + Q++ST P +
Sbjct: 4   RARTAAHRSSPNRSSPFLKFLKPGALAQIRDSRISSSRSHRIN-----WISQIRSTPPMS 58

Query: 275 EPHSTGF-----SMDGIPCFNVRVKSQPRCLQRKKLVA 373
            P  +G      + DG PCF+ R+   PRC QRKKLVA
Sbjct: 59  PPADSGLPQITVAADGFPCFSGRIYG-PRCPQRKKLVA 95


Top