BLASTX nr result
ID: Rehmannia24_contig00028407
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00028407
(500 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 177 3e-59
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 176 4e-57
emb|CAN80356.1| hypothetical protein VITISV_003506 [Vitis vinifera] 170 7e-57
emb|CAN75188.1| hypothetical protein VITISV_032368 [Vitis vinifera] 169 9e-57
gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum] 167 1e-56
emb|CAN77247.1| hypothetical protein VITISV_021658 [Vitis vinifera] 162 2e-55
gb|AAM15062.1| putative retroelement integrase [Arabidopsis thal... 172 3e-55
emb|CAN64020.1| hypothetical protein VITISV_008811 [Vitis vinifera] 164 1e-54
ref|XP_006606762.1| PREDICTED: uncharacterized protein LOC102662... 157 7e-53
emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group] 155 4e-51
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 154 1e-50
emb|CAE02303.2| OSJNBa0042F21.10 [Oryza sativa Japonica Group] 154 1e-50
gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-... 154 1e-50
gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sati... 154 1e-50
dbj|BAH80072.1| putative unclassified retrotransposon protein [O... 154 1e-50
emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera] 165 1e-50
emb|CAE02877.1| OSJNBb0022F23.14 [Oryza sativa Japonica Group] 153 2e-50
emb|CAH66606.1| H0211A12.9 [Oryza sativa Indica Group] 152 2e-50
emb|CAE02411.2| OSJNBa0024J22.19 [Oryza sativa Japonica Group] 152 2e-50
gb|EMJ21939.1| hypothetical protein PRUPE_ppa023598mg [Prunus pe... 164 2e-50
>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
Length = 1887
Score = 177 bits (448), Expect(2) = 3e-59
Identities = 80/108 (74%), Positives = 98/108 (90%)
Frame = +2
Query: 2 WLVMPFGVTNAPSTFMRLMNHILRAFIGKFVVVYFDDILIYNKSLYEHLDHLRAVLEVLR 181
WLVMPFG+TNAPSTFMRLMNH+LRAFIG+FV+VYFDDIL+Y+KSL EH++HL+ VLEVLR
Sbjct: 1029 WLVMPFGLTNAPSTFMRLMNHVLRAFIGRFVIVYFDDILVYSKSLEEHVEHLKMVLEVLR 1088
Query: 182 KEKLYANIKKCTFCSRQLIFLGFLVNSRGIMVDEEKIKAI*DWPKPTS 325
KEKLYAN+KKCTF + L+FLGF+V++ G+ VDEEK+KAI +WP P S
Sbjct: 1089 KEKLYANLKKCTFGTDNLVFLGFVVSTDGVKVDEEKVKAIREWPSPKS 1136
Score = 77.8 bits (190), Expect(2) = 3e-59
Identities = 37/56 (66%), Positives = 45/56 (80%)
Frame = +1
Query: 331 QVRSFHGLASFCRRFV*DFITLAAPLMTIIKKSVAFQWGEAQDRAFEFLKERLAHA 498
+VRSFHGLA F RRFV DF TLAAPL +IKK+V F+W +AQ+ AF+ LKE+L HA
Sbjct: 1139 EVRSFHGLAGFYRRFVKDFSTLAAPLTEVIKKNVGFKWEQAQEDAFQALKEKLTHA 1194
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 176 bits (445), Expect(2) = 4e-57
Identities = 83/114 (72%), Positives = 100/114 (87%), Gaps = 2/114 (1%)
Frame = +2
Query: 2 WLVMPFGVTNAPSTFMRLMNHILRAFIGKFVVVYFDDILIYNKSLYEHLDHLRAVLEVLR 181
WLVMPFG+TNAPSTFMRLMNH+LRAFIGKFVVVYFDDILIY+K+L EH+ H++ VL+VLR
Sbjct: 840 WLVMPFGLTNAPSTFMRLMNHVLRAFIGKFVVVYFDDILIYSKTLEEHVAHIQQVLDVLR 899
Query: 182 KEKLYANIKKCTFCSRQLIFLGFLVNSRGIMVDEEKIKAI*DWPKP--TSPVKS 337
KE+LYAN++KCTFC+ Q++FLGF+V+ GI VDE K+KAI DWP P S VKS
Sbjct: 900 KEQLYANLEKCTFCTDQVVFLGFVVSGLGIQVDESKVKAIKDWPTPENVSQVKS 953
Score = 71.6 bits (174), Expect(2) = 4e-57
Identities = 35/55 (63%), Positives = 43/55 (78%)
Frame = +1
Query: 328 SQVRSFHGLASFCRRFV*DFITLAAPLMTIIKKSVAFQWGEAQDRAFEFLKERLA 492
SQV+SF GLA F RRFV F T+AAPL + KK VAFQWGE Q++AF+ LK+RL+
Sbjct: 949 SQVKSFRGLAGFYRRFVRGFSTIAAPLNELTKKGVAFQWGEPQEKAFQELKKRLS 1003
>emb|CAN80356.1| hypothetical protein VITISV_003506 [Vitis vinifera]
Length = 960
Score = 170 bits (430), Expect(2) = 7e-57
Identities = 76/108 (70%), Positives = 97/108 (89%)
Frame = +2
Query: 2 WLVMPFGVTNAPSTFMRLMNHILRAFIGKFVVVYFDDILIYNKSLYEHLDHLRAVLEVLR 181
WLVMPFG+TNA STFMRLMNH+LRAFIG+FVVVYFDDIL+Y+K+L EH++HL VL +LR
Sbjct: 317 WLVMPFGLTNALSTFMRLMNHVLRAFIGRFVVVYFDDILVYSKNLDEHINHLHCVLAILR 376
Query: 182 KEKLYANIKKCTFCSRQLIFLGFLVNSRGIMVDEEKIKAI*DWPKPTS 325
KEKLYAN+KKC+FC +++FLG++V+++GI VDEEK+KAI +WP P S
Sbjct: 377 KEKLYANLKKCSFCMDKVVFLGYVVSAKGIEVDEEKLKAIKEWPTPKS 424
Score = 76.6 bits (187), Expect(2) = 7e-57
Identities = 39/57 (68%), Positives = 44/57 (77%)
Frame = +1
Query: 328 SQVRSFHGLASFCRRFV*DFITLAAPLMTIIKKSVAFQWGEAQDRAFEFLKERLAHA 498
++VRSFHGLASF RFV DF TLAAPL I+KKSV F+WG QDRAF +KERL A
Sbjct: 426 TEVRSFHGLASFYFRFVKDFSTLAAPLTEIVKKSVGFKWGSEQDRAFIEIKERLCGA 482
>emb|CAN75188.1| hypothetical protein VITISV_032368 [Vitis vinifera]
Length = 771
Score = 169 bits (429), Expect(2) = 9e-57
Identities = 75/106 (70%), Positives = 96/106 (90%)
Frame = +2
Query: 2 WLVMPFGVTNAPSTFMRLMNHILRAFIGKFVVVYFDDILIYNKSLYEHLDHLRAVLEVLR 181
WLVMPFG+TNAPSTFMRLMNH LR+FIG+FVVVYFDDIL+Y+K+L EH++HL VL+VLR
Sbjct: 224 WLVMPFGLTNAPSTFMRLMNHALRSFIGRFVVVYFDDILVYSKNLDEHINHLHCVLDVLR 283
Query: 182 KEKLYANIKKCTFCSRQLIFLGFLVNSRGIMVDEEKIKAI*DWPKP 319
K KLYAN+KKC+FC +++FLG++V+++GI VDEEK+KAI +WP P
Sbjct: 284 KXKLYANLKKCSFCMDKVVFLGYVVSAKGIEVDEEKVKAIKEWPTP 329
Score = 76.6 bits (187), Expect(2) = 9e-57
Identities = 38/59 (64%), Positives = 45/59 (76%)
Frame = +1
Query: 322 IASQVRSFHGLASFCRRFV*DFITLAAPLMTIIKKSVAFQWGEAQDRAFEFLKERLAHA 498
+ ++VRSFHGLASF RRFV DF LAAPL I+KKSV F+WG QDRAF +KE+L A
Sbjct: 331 LITEVRSFHGLASFYRRFVKDFSILAAPLTEIVKKSVGFKWGSEQDRAFIEIKEKLCGA 389
>gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]
Length = 1004
Score = 167 bits (424), Expect(2) = 1e-56
Identities = 75/106 (70%), Positives = 94/106 (88%)
Frame = +2
Query: 2 WLVMPFGVTNAPSTFMRLMNHILRAFIGKFVVVYFDDILIYNKSLYEHLDHLRAVLEVLR 181
W+VMPFG+TNAPSTFMRLMNH+LR F+GKFVVVYFDDILIY+K+L +H HL+AVL+VLR
Sbjct: 727 WMVMPFGLTNAPSTFMRLMNHVLREFLGKFVVVYFDDILIYSKNLDDHCIHLKAVLQVLR 786
Query: 182 KEKLYANIKKCTFCSRQLIFLGFLVNSRGIMVDEEKIKAI*DWPKP 319
E LYAN++KC FC+ +IFLGF+V+S+G+ VDEEK+KAI +WP P
Sbjct: 787 YENLYANLEKCVFCTDHVIFLGFIVSSKGVHVDEEKVKAIREWPPP 832
Score = 77.8 bits (190), Expect(2) = 1e-56
Identities = 38/57 (66%), Positives = 45/57 (78%)
Frame = +1
Query: 328 SQVRSFHGLASFCRRFV*DFITLAAPLMTIIKKSVAFQWGEAQDRAFEFLKERLAHA 498
S+VRSFHGLASF RRFV DF TLAAPL I++K V F+WGE Q++AF LKE+L A
Sbjct: 836 SEVRSFHGLASFYRRFVKDFSTLAAPLNEIVEKDVGFKWGEKQEQAFAALKEKLTQA 892
>emb|CAN77247.1| hypothetical protein VITISV_021658 [Vitis vinifera]
Length = 1323
Score = 162 bits (410), Expect(2) = 2e-55
Identities = 74/108 (68%), Positives = 92/108 (85%)
Frame = +2
Query: 2 WLVMPFGVTNAPSTFMRLMNHILRAFIGKFVVVYFDDILIYNKSLYEHLDHLRAVLEVLR 181
WLVMPFG+TNAPSTFMRLMNH L FIG+FVVVYFDDIL+Y+K+L EH++HL VL LR
Sbjct: 634 WLVMPFGLTNAPSTFMRLMNHALHXFIGRFVVVYFDDILVYSKNLDEHINHLHCVLAXLR 693
Query: 182 KEKLYANIKKCTFCSRQLIFLGFLVNSRGIMVDEEKIKAI*DWPKPTS 325
KEKLYAN+KK +FC +++FLG++V+ +GI VDEEK+KAI +WP P S
Sbjct: 694 KEKLYANLKKFSFCMDKVVFLGYVVSXKGIEVDEEKVKAIKEWPTPXS 741
Score = 79.7 bits (195), Expect(2) = 2e-55
Identities = 40/57 (70%), Positives = 45/57 (78%)
Frame = +1
Query: 328 SQVRSFHGLASFCRRFV*DFITLAAPLMTIIKKSVAFQWGEAQDRAFEFLKERLAHA 498
++VRSFHGLASF RRFV DF TLAAPL I+KKSV F+WG QDRAF +KERL A
Sbjct: 743 TEVRSFHGLASFYRRFVKDFSTLAAPLTEIVKKSVGFKWGSEQDRAFIEIKERLCGA 799
>gb|AAM15062.1| putative retroelement integrase [Arabidopsis thaliana]
Length = 1215
Score = 172 bits (437), Expect(2) = 3e-55
Identities = 77/106 (72%), Positives = 96/106 (90%)
Frame = +2
Query: 2 WLVMPFGVTNAPSTFMRLMNHILRAFIGKFVVVYFDDILIYNKSLYEHLDHLRAVLEVLR 181
WLVMPFG+T+APSTFMRLMNH+LRAFIG FV+VYFDDIL+Y++SL EH++HL +VL VLR
Sbjct: 538 WLVMPFGLTHAPSTFMRLMNHVLRAFIGIFVIVYFDDILVYSESLREHIEHLDSVLNVLR 597
Query: 182 KEKLYANIKKCTFCSRQLIFLGFLVNSRGIMVDEEKIKAI*DWPKP 319
KE+LYAN+KKCTFC+ L+FLGF+V++ G+ VDEEK+KAI DWP P
Sbjct: 598 KEELYANLKKCTFCTDNLVFLGFVVSADGVKVDEEKVKAIRDWPSP 643
Score = 68.6 bits (166), Expect(2) = 3e-55
Identities = 31/56 (55%), Positives = 42/56 (75%)
Frame = +1
Query: 331 QVRSFHGLASFCRRFV*DFITLAAPLMTIIKKSVAFQWGEAQDRAFEFLKERLAHA 498
+VRSFHGLA F RRF DF T+ APL ++KK V F+W +AQ+ AF+ LK++L +A
Sbjct: 648 EVRSFHGLAGFYRRFFKDFSTIVAPLTEVMKKDVGFKWEKAQEEAFQSLKDKLTNA 703
>emb|CAN64020.1| hypothetical protein VITISV_008811 [Vitis vinifera]
Length = 1089
Score = 164 bits (414), Expect(2) = 1e-54
Identities = 76/107 (71%), Positives = 93/107 (86%)
Frame = +2
Query: 5 LVMPFGVTNAPSTFMRLMNHILRAFIGKFVVVYFDDILIYNKSLYEHLDHLRAVLEVLRK 184
LVMPFG+TNAPSTFMRLMNH LRAFIG+FVVVYF DIL+Y+K+L EH+ HL VL VLRK
Sbjct: 564 LVMPFGLTNAPSTFMRLMNHALRAFIGRFVVVYFYDILVYSKNLBEHIXHLHCVLTVLRK 623
Query: 185 EKLYANIKKCTFCSRQLIFLGFLVNSRGIMVDEEKIKAI*DWPKPTS 325
EKLYAN+KKC+FC +++FLG++V+ +GI VDEEK+KAI +WP P S
Sbjct: 624 EKLYANLKKCSFCMDKVVFLGYVVSXKGIEVDEEKVKAIKEWPTPKS 670
Score = 75.5 bits (184), Expect(2) = 1e-54
Identities = 38/56 (67%), Positives = 42/56 (75%)
Frame = +1
Query: 331 QVRSFHGLASFCRRFV*DFITLAAPLMTIIKKSVAFQWGEAQDRAFEFLKERLAHA 498
+VRSFHGL SF RRFV DF TLA PL I+KKSV F+WG QDRAF +KERL A
Sbjct: 673 EVRSFHGLXSFYRRFVKDFSTLAIPLTEIVKKSVGFKWGSEQDRAFIEIKERLCGA 728
>ref|XP_006606762.1| PREDICTED: uncharacterized protein LOC102662828 [Glycine max]
Length = 612
Score = 157 bits (396), Expect(2) = 7e-53
Identities = 73/105 (69%), Positives = 89/105 (84%)
Frame = +2
Query: 5 LVMPFGVTNAPSTFMRLMNHILRAFIGKFVVVYFDDILIYNKSLYEHLDHLRAVLEVLRK 184
+VMPFG+TNAPSTFMRLMNH LR FIGKFVVVYFDDILIY+ SL H +HL+ VL VLRK
Sbjct: 1 MVMPFGLTNAPSTFMRLMNHALREFIGKFVVVYFDDILIYSTSLDLHAEHLQFVLSVLRK 60
Query: 185 EKLYANIKKCTFCSRQLIFLGFLVNSRGIMVDEEKIKAI*DWPKP 319
EKLYAN++KC+FC+ ++FLGF+V+ G+ VD EK+KAI +WP P
Sbjct: 61 EKLYANLEKCSFCTDHVVFLGFVVSVEGVRVDVEKVKAIQEWPTP 105
Score = 76.3 bits (186), Expect(2) = 7e-53
Identities = 37/57 (64%), Positives = 44/57 (77%)
Frame = +1
Query: 328 SQVRSFHGLASFCRRFV*DFITLAAPLMTIIKKSVAFQWGEAQDRAFEFLKERLAHA 498
S+VR FHGLASF RRFV DF TLAAPL I+KK+V F+WG+ Q+ AF LK RL +A
Sbjct: 109 SEVRGFHGLASFYRRFVKDFSTLAAPLTEIVKKNVGFKWGKKQEEAFAALKHRLTNA 165
>emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]
Length = 2241
Score = 155 bits (392), Expect(2) = 4e-51
Identities = 73/118 (61%), Positives = 93/118 (78%), Gaps = 2/118 (1%)
Frame = +2
Query: 2 WLVMPFGVTNAPSTFMRLMNHILRAFIGKFVVVYFDDILIYNKSLYEHLDHLRAVLEVLR 181
WLVMPFG+TNAPSTFMRLMN +LR FIGKFVVVYFDDILIY+KS+ EH +HLRAV LR
Sbjct: 931 WLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFNHLRAVFNALR 990
Query: 182 KEKLYANIKKCTFCSRQLIFLGFLVNSRGIMVDEEKIKAI*DWPKP--TSPVKSVVSM 349
+L+ N+KKCTFC+ ++ FLG++V +GI VD+ K++AI WP P S V+S + +
Sbjct: 991 DARLFGNLKKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLGL 1048
Score = 72.0 bits (175), Expect(2) = 4e-51
Identities = 35/57 (61%), Positives = 41/57 (71%)
Frame = +1
Query: 328 SQVRSFHGLASFCRRFV*DFITLAAPLMTIIKKSVAFQWGEAQDRAFEFLKERLAHA 498
SQVRSF GLA F RRFV DF T+AAPL + KK V F WG +Q+ AF LK++L HA
Sbjct: 1040 SQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTWGTSQENAFHMLKDKLTHA 1096
Score = 67.8 bits (164), Expect(2) = 9e-18
Identities = 38/105 (36%), Positives = 55/105 (52%)
Frame = +2
Query: 11 MPFGVTNAPSTFMRLMNHILRAFIGKFVVVYFDDILIYNKSLYEHLDHLRAVLEVLRKEK 190
M FG+ NAP++F R M I I + ++ DD +Y K+ L +L VL+ +++
Sbjct: 2031 MSFGLCNAPASFQRCMMSIFSDMIEDIMEIFMDDFSVYGKTFGHCLQNLDKVLQRCQEKD 2090
Query: 191 LYANIKKCTFCSRQLIFLGFLVNSRGIMVDEEKIKAI*DWPKPTS 325
L N +KC F R+ I LG V+ RGI D KI I P P +
Sbjct: 2091 LVLNWEKCHFMVREGIVLGHRVSERGIEFDRAKIDVIDQLPPPVN 2135
Score = 47.8 bits (112), Expect(2) = 9e-18
Identities = 23/52 (44%), Positives = 34/52 (65%)
Frame = +1
Query: 334 VRSFHGLASFCRRFV*DFITLAAPLMTIIKKSVAFQWGEAQDRAFEFLKERL 489
+RSF G A F RRF+ DF T+A PL ++ K F++ +A ++FE LK+ L
Sbjct: 2139 IRSFLGHADFYRRFIKDFSTIARPLTNLLAKDTPFEFDDACLKSFEILKKAL 2190
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 154 bits (388), Expect(2) = 1e-50
Identities = 72/118 (61%), Positives = 93/118 (78%), Gaps = 2/118 (1%)
Frame = +2
Query: 2 WLVMPFGVTNAPSTFMRLMNHILRAFIGKFVVVYFDDILIYNKSLYEHLDHLRAVLEVLR 181
WLVMPFG+TNAPSTFMRLMN +LR FIGKFVVVYFDDILIY+KS+ EH +HLRAV LR
Sbjct: 837 WLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFNHLRAVFNALR 896
Query: 182 KEKLYANIKKCTFCSRQLIFLGFLVNSRGIMVDEEKIKAI*DWPKP--TSPVKSVVSM 349
+L+ N++KCTFC+ ++ FLG++V +GI VD+ K++AI WP P S V+S + +
Sbjct: 897 DARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLGL 954
Score = 72.0 bits (175), Expect(2) = 1e-50
Identities = 35/57 (61%), Positives = 41/57 (71%)
Frame = +1
Query: 328 SQVRSFHGLASFCRRFV*DFITLAAPLMTIIKKSVAFQWGEAQDRAFEFLKERLAHA 498
SQVRSF GLA F RRFV DF T+AAPL + KK V F WG +Q+ AF LK++L HA
Sbjct: 946 SQVRSFLGLAGFYRRFVQDFSTIAAPLNVLTKKGVPFTWGTSQENAFHMLKDKLTHA 1002
Score = 109 bits (273), Expect(2) = 2e-31
Identities = 51/116 (43%), Positives = 79/116 (68%), Gaps = 2/116 (1%)
Frame = +2
Query: 8 VMPFGVTNAPSTFMRLMNHILRAFIGKFVVVYFDDILIYNKSLYEHLDHLRAVLEVLRKE 187
VM FG+TNAP+ FM LMN + ++ KFVVV+ DDIL+Y++S +H HLR VL LR+
Sbjct: 1631 VMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILVYSQSEEDHQHHLRLVLGKLREH 1690
Query: 188 KLYANIKKCTFCSRQLIFLGFLVNSRGIMVDEEKIKAI*DW--PKPTSPVKSVVSM 349
+LYA + KC F ++ FLG +++++G+ VD E + A+ DW PK + ++S + +
Sbjct: 1691 QLYAKLSKCEFWLSEVKFLGHVISAKGVAVDPETVTAVTDWKQPKTVTQIRSFLGL 1746
Score = 51.6 bits (122), Expect(2) = 2e-31
Identities = 23/54 (42%), Positives = 36/54 (66%)
Frame = +1
Query: 328 SQVRSFHGLASFCRRFV*DFITLAAPLMTIIKKSVAFQWGEAQDRAFEFLKERL 489
+Q+RSF GLA + RRF+ +F +A P+ ++KK F W ++AF+ LKE+L
Sbjct: 1738 TQIRSFLGLAGYYRRFIENFSKIARPMTQLLKKEEKFVWSPQCEKAFQTLKEKL 1791
>emb|CAE02303.2| OSJNBa0042F21.10 [Oryza sativa Japonica Group]
Length = 2388
Score = 154 bits (388), Expect(2) = 1e-50
Identities = 72/118 (61%), Positives = 93/118 (78%), Gaps = 2/118 (1%)
Frame = +2
Query: 2 WLVMPFGVTNAPSTFMRLMNHILRAFIGKFVVVYFDDILIYNKSLYEHLDHLRAVLEVLR 181
WLVMPFG+TNAPSTFMRLMN +LR FIGKFVVVYFDDILIY+KS+ EH +HLRAV LR
Sbjct: 673 WLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFNHLRAVFNALR 732
Query: 182 KEKLYANIKKCTFCSRQLIFLGFLVNSRGIMVDEEKIKAI*DWPKP--TSPVKSVVSM 349
+L+ N++KCTFC+ ++ FLG++V +GI VD+ K++AI WP P S V+S + +
Sbjct: 733 DARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLGL 790
Score = 72.0 bits (175), Expect(2) = 1e-50
Identities = 35/57 (61%), Positives = 41/57 (71%)
Frame = +1
Query: 328 SQVRSFHGLASFCRRFV*DFITLAAPLMTIIKKSVAFQWGEAQDRAFEFLKERLAHA 498
SQVRSF GLA F RRFV DF T+AAPL + KK V F WG +Q+ AF LK++L HA
Sbjct: 782 SQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTWGTSQENAFHMLKDKLTHA 838
Score = 51.6 bits (122), Expect(2) = 2e-10
Identities = 23/54 (42%), Positives = 36/54 (66%)
Frame = +1
Query: 328 SQVRSFHGLASFCRRFV*DFITLAAPLMTIIKKSVAFQWGEAQDRAFEFLKERL 489
+Q+RSF GLA + RRF+ +F +A P+ ++KK F W ++AF+ LKE+L
Sbjct: 1713 TQIRSFLGLAGYYRRFIENFSKIARPMTQLLKKEEKFVWSPQCEKAFQTLKEKL 1766
Score = 38.9 bits (89), Expect(2) = 2e-10
Identities = 16/49 (32%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Frame = +2
Query: 209 KCTFCSRQLIFLGFLVNSRGIMVDEEKIKAI*DW--PKPTSPVKSVVSM 349
KC F ++ FLG +++++G+ VD E + A+ DW PK + ++S + +
Sbjct: 1673 KCEFWLSEVKFLGHVISAKGVAVDPETVTAVTDWKQPKTVTQIRSFLGL 1721
>gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|108864301|gb|ABA93040.2|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1748
Score = 154 bits (388), Expect(2) = 1e-50
Identities = 72/118 (61%), Positives = 93/118 (78%), Gaps = 2/118 (1%)
Frame = +2
Query: 2 WLVMPFGVTNAPSTFMRLMNHILRAFIGKFVVVYFDDILIYNKSLYEHLDHLRAVLEVLR 181
WLVMPFG+TNAPSTFMRLMN +LR FIGKFVVVYFDDILIY+KS+ EH +HLRAV LR
Sbjct: 1179 WLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFNHLRAVFNALR 1238
Query: 182 KEKLYANIKKCTFCSRQLIFLGFLVNSRGIMVDEEKIKAI*DWPKP--TSPVKSVVSM 349
+L+ N++KCTFC+ ++ FLG++V +GI VD+ K++AI WP P S V+S + +
Sbjct: 1239 DARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLGL 1296
Score = 72.0 bits (175), Expect(2) = 1e-50
Identities = 35/57 (61%), Positives = 41/57 (71%)
Frame = +1
Query: 328 SQVRSFHGLASFCRRFV*DFITLAAPLMTIIKKSVAFQWGEAQDRAFEFLKERLAHA 498
SQVRSF GLA F RRFV DF T+AAPL + KK V F WG +Q+ AF LK++L HA
Sbjct: 1288 SQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTWGTSQENAFHMLKDKLTHA 1344
>gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
Length = 1739
Score = 154 bits (388), Expect(2) = 1e-50
Identities = 72/118 (61%), Positives = 93/118 (78%), Gaps = 2/118 (1%)
Frame = +2
Query: 2 WLVMPFGVTNAPSTFMRLMNHILRAFIGKFVVVYFDDILIYNKSLYEHLDHLRAVLEVLR 181
WLVMPFG+TNAPSTFMRLMN +LR FIGKFVVVYFDDILIY+KS+ EH +HLRAV LR
Sbjct: 1170 WLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFNHLRAVFNALR 1229
Query: 182 KEKLYANIKKCTFCSRQLIFLGFLVNSRGIMVDEEKIKAI*DWPKP--TSPVKSVVSM 349
+L+ N++KCTFC+ ++ FLG++V +GI VD+ K++AI WP P S V+S + +
Sbjct: 1230 DARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLGL 1287
Score = 72.0 bits (175), Expect(2) = 1e-50
Identities = 35/57 (61%), Positives = 41/57 (71%)
Frame = +1
Query: 328 SQVRSFHGLASFCRRFV*DFITLAAPLMTIIKKSVAFQWGEAQDRAFEFLKERLAHA 498
SQVRSF GLA F RRFV DF T+AAPL + KK V F WG +Q+ AF LK++L HA
Sbjct: 1279 SQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTWGTSQENAFHMLKDKLTHA 1335
>dbj|BAH80072.1| putative unclassified retrotransposon protein [Oryza sativa Indica
Group]
Length = 848
Score = 154 bits (388), Expect(2) = 1e-50
Identities = 72/118 (61%), Positives = 93/118 (78%), Gaps = 2/118 (1%)
Frame = +2
Query: 2 WLVMPFGVTNAPSTFMRLMNHILRAFIGKFVVVYFDDILIYNKSLYEHLDHLRAVLEVLR 181
WLVMPFG+TNAPSTFMRLMN +LR FIGKFVVVYFDDILIY+KS+ EH +HLRAV LR
Sbjct: 201 WLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFNHLRAVFNALR 260
Query: 182 KEKLYANIKKCTFCSRQLIFLGFLVNSRGIMVDEEKIKAI*DWPKP--TSPVKSVVSM 349
+L+ N++KCTFC+ ++ FLG++V +GI VD+ K++AI WP P S V+S + +
Sbjct: 261 DARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLGL 318
Score = 72.0 bits (175), Expect(2) = 1e-50
Identities = 35/57 (61%), Positives = 41/57 (71%)
Frame = +1
Query: 328 SQVRSFHGLASFCRRFV*DFITLAAPLMTIIKKSVAFQWGEAQDRAFEFLKERLAHA 498
SQVRSF GLA F RRFV DF T+AAPL + KK V F WG +Q+ AF LK++L HA
Sbjct: 310 SQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTWGTSQENAFHMLKDKLTHA 366
>emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera]
Length = 1173
Score = 165 bits (417), Expect(2) = 1e-50
Identities = 73/106 (68%), Positives = 93/106 (87%)
Frame = +2
Query: 2 WLVMPFGVTNAPSTFMRLMNHILRAFIGKFVVVYFDDILIYNKSLYEHLDHLRAVLEVLR 181
WLVMPFG+TNAPSTFMRLMNH LR FI +FVVVYFDDIL+Y+K+L EH++HL VL VLR
Sbjct: 519 WLVMPFGLTNAPSTFMRLMNHALRVFISRFVVVYFDDILVYSKNLDEHINHLHCVLXVLR 578
Query: 182 KEKLYANIKKCTFCSRQLIFLGFLVNSRGIMVDEEKIKAI*DWPKP 319
KEKLYAN+KKC+FC +++FLG++V+++GI VDEE +K+I +WP P
Sbjct: 579 KEKLYANLKKCSFCMDKVVFLGYVVSAKGIEVDEENVKSIKEWPTP 624
Score = 60.5 bits (145), Expect(2) = 1e-50
Identities = 28/43 (65%), Positives = 34/43 (79%)
Frame = +1
Query: 322 IASQVRSFHGLASFCRRFV*DFITLAAPLMTIIKKSVAFQWGE 450
+ ++VRSFHGLASF RRFV DF TL APL I+KK V F+WG+
Sbjct: 626 LITEVRSFHGLASFYRRFVKDFSTLVAPLTEIVKKFVGFKWGK 668
>emb|CAE02877.1| OSJNBb0022F23.14 [Oryza sativa Japonica Group]
Length = 1431
Score = 153 bits (386), Expect(2) = 2e-50
Identities = 72/118 (61%), Positives = 92/118 (77%), Gaps = 2/118 (1%)
Frame = +2
Query: 2 WLVMPFGVTNAPSTFMRLMNHILRAFIGKFVVVYFDDILIYNKSLYEHLDHLRAVLEVLR 181
WLVMPFG+TNAPSTFMRLMN +LR FIGKFVVVYFDDILIY+KS+ EH HLRAV LR
Sbjct: 782 WLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFKHLRAVFNALR 841
Query: 182 KEKLYANIKKCTFCSRQLIFLGFLVNSRGIMVDEEKIKAI*DWPKP--TSPVKSVVSM 349
+L+ N++KCTFC+ ++ FLG++V +GI VD+ K++AI WP P S V+S + +
Sbjct: 842 DARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLGL 899
Score = 72.0 bits (175), Expect(2) = 2e-50
Identities = 35/57 (61%), Positives = 41/57 (71%)
Frame = +1
Query: 328 SQVRSFHGLASFCRRFV*DFITLAAPLMTIIKKSVAFQWGEAQDRAFEFLKERLAHA 498
SQVRSF GLA F RRFV DF T+AAPL + KK V F WG +Q+ AF LK++L HA
Sbjct: 891 SQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTWGTSQENAFHMLKDKLTHA 947
>emb|CAH66606.1| H0211A12.9 [Oryza sativa Indica Group]
Length = 1667
Score = 152 bits (385), Expect(2) = 2e-50
Identities = 71/118 (60%), Positives = 93/118 (78%), Gaps = 2/118 (1%)
Frame = +2
Query: 2 WLVMPFGVTNAPSTFMRLMNHILRAFIGKFVVVYFDDILIYNKSLYEHLDHLRAVLEVLR 181
WLVMPFG+TNAP+TFMRLMN +LR FIGKFVVVYFDDILIY+KS+ EH +HLRAV LR
Sbjct: 760 WLVMPFGLTNAPTTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFNHLRAVFNALR 819
Query: 182 KEKLYANIKKCTFCSRQLIFLGFLVNSRGIMVDEEKIKAI*DWPKP--TSPVKSVVSM 349
+L+ N++KCTFC+ ++ FLG++V +GI VD+ K++AI WP P S V+S + +
Sbjct: 820 DARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLGL 877
Score = 72.0 bits (175), Expect(2) = 2e-50
Identities = 35/57 (61%), Positives = 41/57 (71%)
Frame = +1
Query: 328 SQVRSFHGLASFCRRFV*DFITLAAPLMTIIKKSVAFQWGEAQDRAFEFLKERLAHA 498
SQVRSF GLA F RRFV DF T+AAPL + KK V F WG +Q+ AF LK++L HA
Sbjct: 869 SQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTWGTSQENAFHMLKDKLTHA 925
>emb|CAE02411.2| OSJNBa0024J22.19 [Oryza sativa Japonica Group]
Length = 1667
Score = 152 bits (385), Expect(2) = 2e-50
Identities = 71/118 (60%), Positives = 93/118 (78%), Gaps = 2/118 (1%)
Frame = +2
Query: 2 WLVMPFGVTNAPSTFMRLMNHILRAFIGKFVVVYFDDILIYNKSLYEHLDHLRAVLEVLR 181
WLVMPFG+TNAP+TFMRLMN +LR FIGKFVVVYFDDILIY+KS+ EH +HLRAV LR
Sbjct: 760 WLVMPFGLTNAPTTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFNHLRAVFNALR 819
Query: 182 KEKLYANIKKCTFCSRQLIFLGFLVNSRGIMVDEEKIKAI*DWPKP--TSPVKSVVSM 349
+L+ N++KCTFC+ ++ FLG++V +GI VD+ K++AI WP P S V+S + +
Sbjct: 820 DARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLGL 877
Score = 72.0 bits (175), Expect(2) = 2e-50
Identities = 35/57 (61%), Positives = 41/57 (71%)
Frame = +1
Query: 328 SQVRSFHGLASFCRRFV*DFITLAAPLMTIIKKSVAFQWGEAQDRAFEFLKERLAHA 498
SQVRSF GLA F RRFV DF T+AAPL + KK V F WG +Q+ AF LK++L HA
Sbjct: 869 SQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTWGTSQENAFHMLKDKLTHA 925
>gb|EMJ21939.1| hypothetical protein PRUPE_ppa023598mg [Prunus persica]
Length = 1457
Score = 164 bits (414), Expect(2) = 2e-50
Identities = 76/106 (71%), Positives = 89/106 (83%)
Frame = +2
Query: 2 WLVMPFGVTNAPSTFMRLMNHILRAFIGKFVVVYFDDILIYNKSLYEHLDHLRAVLEVLR 181
WLVMPFG++NAPSTFMRLMN +LR FIG FVVVYFDDILIY+ + EHL HLR VL+VLR
Sbjct: 735 WLVMPFGLSNAPSTFMRLMNQVLRPFIGSFVVVYFDDILIYSTTKEEHLVHLRQVLDVLR 794
Query: 182 KEKLYANIKKCTFCSRQLIFLGFLVNSRGIMVDEEKIKAI*DWPKP 319
+ KLY N+KKCTFC+ +L+FLGF+V GI VD+EKIKAI DWP P
Sbjct: 795 ENKLYMNLKKCTFCTNKLLFLGFVVGENGIQVDDEKIKAILDWPTP 840
Score = 60.8 bits (146), Expect(2) = 2e-50
Identities = 30/59 (50%), Positives = 41/59 (69%)
Frame = +1
Query: 322 IASQVRSFHGLASFCRRFV*DFITLAAPLMTIIKKSVAFQWGEAQDRAFEFLKERLAHA 498
I S+VRSFHGLA+F RRFV F ++ AP+ +KK F WG+ Q+R+F +KE+L A
Sbjct: 842 IVSEVRSFHGLATFYRRFVRHFSSITAPITECLKKG-RFSWGDEQERSFADIKEKLCTA 899