BLASTX nr result
ID: Rehmannia24_contig00028289
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00028289
(405 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 65 1e-08
ref|YP_007516889.1| hypothetical protein GlmaxMp41 (mitochondrio... 62 8e-08
ref|XP_006485451.1| PREDICTED: uncharacterized protein LOC102622... 61 1e-07
ref|XP_006487438.1| PREDICTED: putative ribonuclease H protein A... 60 2e-07
ref|XP_004292563.1| PREDICTED: putative ribonuclease H protein A... 60 3e-07
ref|XP_006482369.1| PREDICTED: putative ribonuclease H protein A... 58 1e-06
ref|XP_004298270.1| PREDICTED: putative ribonuclease H protein A... 57 2e-06
ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626... 57 2e-06
ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein A... 57 2e-06
ref|XP_006473914.1| PREDICTED: uncharacterized protein LOC102629... 57 3e-06
ref|XP_006294792.1| hypothetical protein CARUB_v10023843mg, part... 57 3e-06
ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621... 55 7e-06
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta... 55 7e-06
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 64.7 bits (156), Expect = 1e-08
Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 1/133 (0%)
Frame = +3
Query: 6 RCGEEIETAEHALRDCPWSSFFWRASPLRLDPALTISSASMADLANEIQKFRNDDMATLF 185
RCGE+ ET EH + C SS W SPLR+ + + + + + ++ + LF
Sbjct: 1094 RCGEKEETTEHLIWGCDESSRAWYISPLRIHTGNIEAGSFRIWVESLLDTHKDTEWWALF 1153
Query: 186 AMHLWVLWYARNMRTFQGKELSHNECYLLASKCLREYQDAKVEYRNL-TLAAKETHWKRP 362
M W +W RN F+ K+L+ E A + + E+++ + TL E W P
Sbjct: 1154 WMICWNIWLGRNKWVFEKKKLAFQEVVERAVRGVMEFEEECAHTSPVETLNTHENGWSVP 1213
Query: 363 REGFFKINSDASI 401
G K+N DA++
Sbjct: 1214 PVGMVKLNVDAAV 1226
>ref|YP_007516889.1| hypothetical protein GlmaxMp41 (mitochondrion) [Glycine max]
gi|403311604|gb|AFR34352.1| hypothetical protein
GlmaxMp41 (mitochondrion) [Glycine max]
Length = 167
Score = 62.0 bits (149), Expect = 8e-08
Identities = 37/128 (28%), Positives = 62/128 (48%)
Frame = +3
Query: 18 EIETAEHALRDCPWSSFFWRASPLRLDPALTISSASMADLANEIQKFRNDDMATLFAMHL 197
E E+ H L+ CPW+S W PL L + + + +D E+ K +++ L +
Sbjct: 2 EPESTIHVLKGCPWASGIWLLCPLALH-TQQMQALNFSDWVKEMGKCLDEEQLELMLVVA 60
Query: 198 WVLWYARNMRTFQGKELSHNECYLLASKCLREYQDAKVEYRNLTLAAKETHWKRPREGFF 377
W LW RN+ FQ + N + +K + +++ K E L + W+ P G +
Sbjct: 61 WALWSDRNLLLFQDIQ---NYPVDVVNKAISFFEEYKKE--KLKIVQTPIGWQAPPHGVY 115
Query: 378 KINSDASI 401
KIN+DA+I
Sbjct: 116 KINTDAAI 123
>ref|XP_006485451.1| PREDICTED: uncharacterized protein LOC102622884 [Citrus sinensis]
Length = 1160
Score = 61.2 bits (147), Expect = 1e-07
Identities = 41/134 (30%), Positives = 60/134 (44%), Gaps = 4/134 (2%)
Frame = +3
Query: 9 CGEEIETAEHALRDCPWSSFFWRASPLRLDPALTISSASMADLANEIQKFRNDDMATLFA 188
C IE HAL DC + WR S +D + L + +++ R++ LFA
Sbjct: 853 CKMGIENVFHALVDCKAAKKVWRLSLFYID-IQAAPGQDILSLLHGVKRMRSNADVDLFA 911
Query: 189 MHLWVLWYARNMRTFQGKELSHNECYLLASKCLREYQ----DAKVEYRNLTLAAKETHWK 356
+ LW W ARN F+GK + A + Y+ A V + A + W
Sbjct: 912 VMLWAKWNARNQWLFKGKRENPQSVVAKAEAVMEAYKRVQPSADVSHGKQQKVA-QLGWN 970
Query: 357 RPREGFFKINSDAS 398
P+EGF KIN+DA+
Sbjct: 971 PPQEGFVKINTDAA 984
>ref|XP_006487438.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 335
Score = 60.5 bits (145), Expect = 2e-07
Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 3/136 (2%)
Frame = +3
Query: 3 ERCGEEIETAEHALRDCPWSSFFWRASPLRLDPALTISSASMADLANEIQKFRNDDMATL 182
+RCG ++E H L C + W+ SP+ D I S+++ ++Q+ ++D L
Sbjct: 59 KRCGNKVENILHVLVTCKAAKKVWQRSPVA-DAVHKIDSSNLFGELTKLQRSLSNDDFEL 117
Query: 183 FAMHLWVLWYARNMRTFQGKELSHNECYLLASKCLREY---QDAKVEYRNLTLAAKETHW 353
+ LW++WYARN F+G ++ A Y Q ++ +L ++ W
Sbjct: 118 LLVLLWIIWYARNKFVFEGMKIDPGISVAKAEAIKEAYKRTQFPEMLVGKNSLRQEQNKW 177
Query: 354 KRPREGFFKINSDASI 401
P + KIN DA+I
Sbjct: 178 APPPPRWVKINVDAAI 193
>ref|XP_004292563.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 504
Score = 60.1 bits (144), Expect = 3e-07
Identities = 40/133 (30%), Positives = 56/133 (42%), Gaps = 3/133 (2%)
Frame = +3
Query: 9 CGEEIETAEHALRDCPWSSFFWRASPL--RLDPA-LTISSASMADLANEIQKFRNDDMAT 179
CG+ ET EH L C W + W SPL R+D +T + + N + + T
Sbjct: 248 CGKTEETFEHLLLLCHWVNPIWFGSPLGIRIDKRKITTFDRWLISIYNHCPSSEREAVLT 307
Query: 180 LFAMHLWVLWYARNMRTFQGKELSHNECYLLASKCLREYQDAKVEYRNLTLAAKETHWKR 359
L + W +W R +Q +E+S A E++ A RN + W
Sbjct: 308 LISTICWAIWKERCHFVYQHREVSPPFTIRAARNLALEFRHASASMRNSRVPRLHMQWLP 367
Query: 360 PREGFFKINSDAS 398
P G KINSDAS
Sbjct: 368 PPFGHHKINSDAS 380
>ref|XP_006482369.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 494
Score = 58.2 bits (139), Expect = 1e-06
Identities = 38/137 (27%), Positives = 61/137 (44%), Gaps = 5/137 (3%)
Frame = +3
Query: 3 ERCGEEIETAEHALRDCPWSSFFWRASPLRLDPALTISSASMADLANEI--QKFRNDDMA 176
+RCG +E HAL C + W+ SP+ A + D+ ++ +K DM
Sbjct: 250 KRCGNRVENTLHALITCKAAKKVWQLSPM----ASSFQEMGNPDILGDLGGKKLSRADME 305
Query: 177 TLFAMHLWVLWYARNMRTFQGKELSHNECYLLA---SKCLREYQDAKVEYRNLTLAAKET 347
L + LWV+WY RN F+ +L A ++ R Q ++ K+T
Sbjct: 306 MLMTI-LWVIWYDRNKLVFEDLKLDPRLSMAKAEAINEAFRRTQFPEITNEGKLQKLKQT 364
Query: 348 HWKRPREGFFKINSDAS 398
W P +G+ K+N DA+
Sbjct: 365 VWTPPPQGWLKLNVDAT 381
>ref|XP_004298270.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 393
Score = 57.4 bits (137), Expect = 2e-06
Identities = 34/132 (25%), Positives = 59/132 (44%)
Frame = +3
Query: 9 CGEEIETAEHALRDCPWSSFFWRASPLRLDPALTISSASMADLANEIQKFRNDDMATLFA 188
CG E+ET H RDCP FW+ +PL L + + +++A + + F
Sbjct: 95 CGNEVETGLHLFRDCPVVQSFWKHNPLHL-RSYSYPGSTLAVWVFLVMDNLSMQQLEGFF 153
Query: 189 MHLWVLWYARNMRTFQGKELSHNECYLLASKCLREYQDAKVEYRNLTLAAKETHWKRPRE 368
M LW +W RN ++G + + + A + L EY+ + ++ + W P
Sbjct: 154 MALWTVWIERNNMIWRGGSCNPSNMSVWAMQLLEEYKKVHTK-PSVKMKRPRAKWCCPPS 212
Query: 369 GFFKINSDASII 404
G K+N D + +
Sbjct: 213 GRLKLNIDGAYL 224
>ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626455 [Citrus sinensis]
Length = 1452
Score = 57.0 bits (136), Expect = 2e-06
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 8/141 (5%)
Frame = +3
Query: 3 ERCGEEIETAEHALRDCPWSSFFWRASPLRLDPALTISSASMADLANEIQKFRNDDM--- 173
+RC ++ET H L +C + W +PL + P S D + IQ+ +
Sbjct: 1175 QRCKLQVETVSHVLIECKAARKIWDLAPLIVQP----SKDHNQDFFSAIQEMWSRSSTAE 1230
Query: 174 ATLFAMHLWVLWYARNMRTFQGKELSHNECYLLASKCLREYQDAKVEYRNLTLAAK---- 341
A L ++ WV+W ARN F+GK+ A L+ YQ +V AK
Sbjct: 1231 AELMIVYCWVIWSARNKFIFEGKKSDSRFLAAKADSVLKAYQ--RVSKPGNVHGAKDRGI 1288
Query: 342 -ETHWKRPREGFFKINSDASI 401
+ WK P + K+N DA++
Sbjct: 1289 DQQKWKPPSQNVLKLNVDAAV 1309
>ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 765
Score = 57.0 bits (136), Expect = 2e-06
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 8/141 (5%)
Frame = +3
Query: 3 ERCGEEIETAEHALRDCPWSSFFWRASPLRLDPALTISSASMADLANEIQKFRNDDM--- 173
+RC ++ET H L +C + W +PL + P S D + IQ+ +
Sbjct: 488 QRCKLQVETVSHVLIECKAARKIWDLAPLIVQP----SKDHNQDFFSAIQEMWSRSSTAE 543
Query: 174 ATLFAMHLWVLWYARNMRTFQGKELSHNECYLLASKCLREYQDAKVEYRNLTLAAK---- 341
A L ++ WV+W ARN F+GK+ A L+ YQ +V AK
Sbjct: 544 AELMIVYCWVIWSARNKFIFEGKKSDSRFLAAKADSVLKAYQ--RVSKPGNVHGAKDRGI 601
Query: 342 -ETHWKRPREGFFKINSDASI 401
+ WK P + K+N DA++
Sbjct: 602 DQQKWKPPSQNVLKLNVDAAV 622
>ref|XP_006473914.1| PREDICTED: uncharacterized protein LOC102629934 [Citrus sinensis]
Length = 304
Score = 56.6 bits (135), Expect = 3e-06
Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 3/136 (2%)
Frame = +3
Query: 3 ERCGEEIETAEHALRDCPWSSFFWRASPLRLDPALTISSASMADLANEIQKFRNDDMATL 182
+RC + ET H L +C S WR +P +D L + L ++ R L
Sbjct: 27 QRCKKTRETVCHMLFECKVSKQIWRLTPFVVDSQLG-KVRDVFSLLQDLTTKRTKAEMEL 85
Query: 183 FAMHLWVLWYARNMRTFQGKELSHNECYLLASKCLREYQDAKVEYRNL---TLAAKETHW 353
W +W++RN+ F+ K + A ++ Y+ ++ + T A + W
Sbjct: 86 IVAVCWSIWHSRNLAIFKNKREDSHLSVAAAEALVQSYKRIQMPQMSKSPPTSLAIQQKW 145
Query: 354 KRPREGFFKINSDASI 401
P EG+FK+N DA++
Sbjct: 146 SYPPEGWFKVNVDAAV 161
>ref|XP_006294792.1| hypothetical protein CARUB_v10023843mg, partial [Capsella rubella]
gi|482563500|gb|EOA27690.1| hypothetical protein
CARUB_v10023843mg, partial [Capsella rubella]
Length = 271
Score = 56.6 bits (135), Expect = 3e-06
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 5/137 (3%)
Frame = +3
Query: 3 ERCGEEIETAEHALRDCPWSSFFWRASPLRLDPALTISSASMADLANEIQKFRNDD---- 170
+RCGE +E A H L +C ++ W SPL + P +T SM DL E ++
Sbjct: 9 KRCGE-LEDAIHVLVNCSYAKQVWELSPL-VKPPVTSMIHSMHDLLIEAKEMITLPPIGL 66
Query: 171 -MATLFAMHLWVLWYARNMRTFQGKELSHNECYLLASKCLREYQDAKVEYRNLTLAAKET 347
+ LF W LW ARN F+ KE + +E + A R + A + + T +++ +
Sbjct: 67 GITPLFPWVFWFLWKARNRLVFERKETAASETCVKALSEARSWHLANLGQSSRTPSSRRS 126
Query: 348 HWKRPREGFFKINSDAS 398
+P + F +DAS
Sbjct: 127 QVSKPHKDAFSCFTDAS 143
>ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis]
Length = 2303
Score = 55.5 bits (132), Expect = 7e-06
Identities = 37/137 (27%), Positives = 55/137 (40%), Gaps = 6/137 (4%)
Frame = +3
Query: 9 CGEEIETAEHALRDCPWSSFFWRASPLRLDPALTISSASMADLAN---EIQKFRNDDMAT 179
C E+ET HAL DC + W ++ IS+A D+ E+ A
Sbjct: 1060 CNREVETVRHALLDCKAARKIW----YHATSSVQISNAQNQDILEFIYEVWSTWGKTKAE 1115
Query: 180 LFAMHLWVLWYARNMRTFQGKELSHNECYLLASKCLREYQDAK---VEYRNLTLAAKETH 350
W +W+ARN R F+GK+ A L Y A+ + + +
Sbjct: 1116 QTIAFCWAIWFARNKRIFEGKKSDPRASAAKAESLLEAYHRARKPDASHIHNVKRIVQKK 1175
Query: 351 WKRPREGFFKINSDASI 401
W+ P F K+N DA+I
Sbjct: 1176 WEPPPGNFLKVNVDAAI 1192
>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1374
Score = 55.5 bits (132), Expect = 7e-06
Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 6/137 (4%)
Frame = +3
Query: 6 RCGEEIETAEHALRDCPWSSFFWRASPLRLDPALTISSASMADLANEIQKFRN----DDM 173
RC ET H L CP++ W SPL P + + ++ + + ++ D
Sbjct: 1094 RCPSHGETVNHLLFKCPFARLTWAISPLPAPPGGEWAESLFRNMHHVLSVHKSQPEESDH 1153
Query: 174 ATLFAMHLWVLWYARNMRTFQGKELSHNECYLLASKCLREYQDAKVEYRNLTLAAKE--T 347
L LW LW RN F+G+E + + L A++ + + + K +T + ++
Sbjct: 1154 HALIPWILWRLWKNRNDLVFKGREFTAPQVILKATEDMDAWNNRKEPQPQVTSSTRDRCV 1213
Query: 348 HWKRPREGFFKINSDAS 398
W+ P G+ K N+D +
Sbjct: 1214 KWQPPSHGWVKCNTDGA 1230