BLASTX nr result
ID: Rehmannia24_contig00028087
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00028087
(433 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS69634.1| hypothetical protein M569_05133 [Genlisea aurea] 86 4e-15
ref|XP_004136763.1| PREDICTED: E3 ubiquitin protein ligase RIE1-... 83 3e-14
ref|XP_004249338.1| PREDICTED: E3 ubiquitin protein ligase RIE1-... 82 7e-14
ref|XP_002283980.1| PREDICTED: E3 ubiquitin-protein ligase At4g1... 79 8e-13
ref|XP_003553376.1| PREDICTED: E3 ubiquitin-protein ligase At4g1... 76 5e-12
ref|XP_006576759.1| PREDICTED: E3 ubiquitin-protein ligase At4g1... 74 2e-11
ref|XP_003521096.1| PREDICTED: E3 ubiquitin-protein ligase At4g1... 74 2e-11
gb|ESW34008.1| hypothetical protein PHAVU_001G116400g [Phaseolus... 73 3e-11
ref|XP_003624869.1| E3 ubiquitin-protein ligase [Medicago trunca... 73 5e-11
ref|XP_004493307.1| PREDICTED: E3 ubiquitin-protein ligase At4g1... 70 2e-10
ref|XP_006430473.1| hypothetical protein CICLE_v10012313mg [Citr... 70 4e-10
ref|XP_006482012.1| PREDICTED: E3 ubiquitin-protein ligase At4g1... 69 9e-10
ref|XP_004165340.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin... 67 2e-09
gb|EXB52082.1| E3 ubiquitin-protein ligase [Morus notabilis] 65 1e-08
ref|XP_002312464.2| zinc finger family protein [Populus trichoca... 65 1e-08
gb|ABK96450.1| unknown [Populus trichocarpa x Populus deltoides] 65 1e-08
ref|XP_002511805.1| cleavage and polyadenylation specificity fac... 64 2e-08
ref|XP_002526000.1| cleavage and polyadenylation specificity fac... 64 2e-08
gb|AFG60447.1| hypothetical protein 0_5075_01, partial [Pinus ta... 64 3e-08
gb|AEW07559.1| hypothetical protein 0_5075_01, partial [Pinus ra... 64 3e-08
>gb|EPS69634.1| hypothetical protein M569_05133 [Genlisea aurea]
Length = 307
Score = 86.3 bits (212), Expect = 4e-15
Identities = 45/95 (47%), Positives = 53/95 (55%)
Frame = -2
Query: 285 IATSFSHPFTRIPSNSDSEPENYSSDGEDDDSAAPLTGNCGYSRPFLFLDMIWNLAXXXX 106
+A FS RI + +S + D A + GNC SRPFLFLDM+WNLA
Sbjct: 1 MAAFFSSHHRRIFAGEESATHGLDDNEYGGDLEAQIAGNCFNSRPFLFLDMLWNLAFILV 60
Query: 105 XXXXXXXXVKERPSTPLRLWVFGYALQCLLHVGFV 1
E+PSTPLRLW+ YALQCLLHVGFV
Sbjct: 61 SVLVLLATFHEQPSTPLRLWICVYALQCLLHVGFV 95
>ref|XP_004136763.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
Length = 336
Score = 83.2 bits (204), Expect = 3e-14
Identities = 43/105 (40%), Positives = 57/105 (54%), Gaps = 9/105 (8%)
Frame = -2
Query: 288 SIATSFSHPFTRIPSNSDSEPENYS---------SDGEDDDSAAPLTGNCGYSRPFLFLD 136
+++T+F+ P TR + S + SD +D + + NC YS P L LD
Sbjct: 20 TVSTTFTIPLTRYTTRLISSDRHRPLLADCAEDHSDSDDFSRRSFIRENCSYSMPILVLD 79
Query: 135 MIWNLAXXXXXXXXXXXXVKERPSTPLRLWVFGYALQCLLHVGFV 1
++WNLA +ERPSTPLRLW+ GY LQCLLHVGFV
Sbjct: 80 VVWNLAFVLVSVVVLFSTFRERPSTPLRLWISGYGLQCLLHVGFV 124
>ref|XP_004249338.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Solanum
lycopersicum]
Length = 334
Score = 82.0 bits (201), Expect = 7e-14
Identities = 48/119 (40%), Positives = 67/119 (56%), Gaps = 3/119 (2%)
Frame = -2
Query: 348 MNQDYPRPLLADNDVGFTRN---SIATSFSHPFTRIPSNSDSEPENYSSDGEDDDSAAPL 178
M+Q+ R L++ N GF ++T FS TR+ S + +++ G+
Sbjct: 1 MDQELHRNLVSGNG-GFEPRYFRGLSTPFSFSLTRLASCFNLHNQSFDDYGDGVSYC--- 56
Query: 177 TGNCGYSRPFLFLDMIWNLAXXXXXXXXXXXXVKERPSTPLRLWVFGYALQCLLHVGFV 1
+ GYSRP +FLD+IWNLA + E+PSTPLRLW+ GYALQCLLHVGF+
Sbjct: 57 --DYGYSRPIVFLDVIWNLAFVLVSCFVLLTTLGEKPSTPLRLWIGGYALQCLLHVGFI 113
>ref|XP_002283980.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
Length = 331
Score = 78.6 bits (192), Expect = 8e-13
Identities = 44/110 (40%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Frame = -2
Query: 303 GFTRNSIATSFSHPFTRIPSNSDSEPENY---------SSDGEDDDSAAPLTGNCGYSRP 151
GF NS++TS S P R + + + S D +D + G +S+P
Sbjct: 15 GFMSNSLSTSLSLPLARYTTRLITGEHHSLLWDCTQPRSEDYDDRHMSDGGGGGGDFSKP 74
Query: 150 FLFLDMIWNLAXXXXXXXXXXXXVKERPSTPLRLWVFGYALQCLLHVGFV 1
+ LD+IWNLA +ERPS PLR+W+FGYALQCLLHVGFV
Sbjct: 75 IVVLDVIWNLAFVSVSMVVLLSTFQERPSRPLRVWIFGYALQCLLHVGFV 124
>ref|XP_003553376.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 327
Score = 75.9 bits (185), Expect = 5e-12
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 5/109 (4%)
Frame = -2
Query: 312 NDVGFTRNSIATSFSHPFTRIPSNSD-----SEPENYSSDGEDDDSAAPLTGNCGYSRPF 148
N V R S +F PF R+ + S S+ ++ SD + D A G C YSR
Sbjct: 14 NPVAVLRFSTGRAF--PFARLIAASRRRLFLSDCADHRSDDDGDSDAD--AGECAYSRAV 69
Query: 147 LFLDMIWNLAXXXXXXXXXXXXVKERPSTPLRLWVFGYALQCLLHVGFV 1
L LDM+WNLA ++ERP+TPLRLW+ GYA +C+LH+ FV
Sbjct: 70 LVLDMVWNLAFVVAAAGVLLSTLRERPATPLRLWLCGYAFECVLHMAFV 118
>ref|XP_006576759.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform X2
[Glycine max]
Length = 283
Score = 74.3 bits (181), Expect = 2e-11
Identities = 36/80 (45%), Positives = 45/80 (56%)
Frame = -2
Query: 240 SDSEPENYSSDGEDDDSAAPLTGNCGYSRPFLFLDMIWNLAXXXXXXXXXXXXVKERPST 61
SD DG+ D + G C YSR L LDM+WNLA ++ERPST
Sbjct: 41 SDCADRRSDDDGDGDGDS----GECAYSRAVLVLDMVWNLAFVVVAAGVLLSTLRERPST 96
Query: 60 PLRLWVFGYALQCLLHVGFV 1
PLRLW+ GYA +C+LH+ FV
Sbjct: 97 PLRLWLCGYAFECVLHMAFV 116
>ref|XP_003521096.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform X1
[Glycine max]
Length = 325
Score = 74.3 bits (181), Expect = 2e-11
Identities = 36/80 (45%), Positives = 45/80 (56%)
Frame = -2
Query: 240 SDSEPENYSSDGEDDDSAAPLTGNCGYSRPFLFLDMIWNLAXXXXXXXXXXXXVKERPST 61
SD DG+ D + G C YSR L LDM+WNLA ++ERPST
Sbjct: 41 SDCADRRSDDDGDGDGDS----GECAYSRAVLVLDMVWNLAFVVVAAGVLLSTLRERPST 96
Query: 60 PLRLWVFGYALQCLLHVGFV 1
PLRLW+ GYA +C+LH+ FV
Sbjct: 97 PLRLWLCGYAFECVLHMAFV 116
>gb|ESW34008.1| hypothetical protein PHAVU_001G116400g [Phaseolus vulgaris]
Length = 322
Score = 73.2 bits (178), Expect = 3e-11
Identities = 34/68 (50%), Positives = 43/68 (63%)
Frame = -2
Query: 204 EDDDSAAPLTGNCGYSRPFLFLDMIWNLAXXXXXXXXXXXXVKERPSTPLRLWVFGYALQ 25
+DDD + CGYSR L LDM+WNLA ++ERPSTPLRLW+ GYA +
Sbjct: 51 DDDDGS-----ECGYSRAVLVLDMVWNLAFVVVAAGVLLSTLRERPSTPLRLWLCGYAFE 105
Query: 24 CLLHVGFV 1
C+LH+ FV
Sbjct: 106 CILHMAFV 113
>ref|XP_003624869.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|355499884|gb|AES81087.1| E3 ubiquitin-protein ligase
[Medicago truncatula]
Length = 297
Score = 72.8 bits (177), Expect = 5e-11
Identities = 36/71 (50%), Positives = 42/71 (59%)
Frame = -2
Query: 213 SDGEDDDSAAPLTGNCGYSRPFLFLDMIWNLAXXXXXXXXXXXXVKERPSTPLRLWVFGY 34
S+ +DDD A C YSR L +DM+WNLA ERPSTPLRLW+ GY
Sbjct: 24 SENDDDDGA------CVYSRAVLVVDMVWNLAFVVVAAAVILSTFNERPSTPLRLWLCGY 77
Query: 33 ALQCLLHVGFV 1
A +CLLHV FV
Sbjct: 78 AFECLLHVAFV 88
>ref|XP_004493307.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cicer
arietinum]
Length = 303
Score = 70.5 bits (171), Expect = 2e-10
Identities = 34/72 (47%), Positives = 42/72 (58%)
Frame = -2
Query: 216 SSDGEDDDSAAPLTGNCGYSRPFLFLDMIWNLAXXXXXXXXXXXXVKERPSTPLRLWVFG 37
+S EDDD G C YSR L +DM+WN++ ERPSTPLR W+ G
Sbjct: 26 ASRSEDDDD----DGGCAYSRAVLVVDMVWNMSFVVVAAAVILSTFGERPSTPLRFWLCG 81
Query: 36 YALQCLLHVGFV 1
YAL+C+LHV FV
Sbjct: 82 YALECILHVVFV 93
>ref|XP_006430473.1| hypothetical protein CICLE_v10012313mg [Citrus clementina]
gi|557532530|gb|ESR43713.1| hypothetical protein
CICLE_v10012313mg [Citrus clementina]
Length = 303
Score = 69.7 bits (169), Expect = 4e-10
Identities = 34/61 (55%), Positives = 39/61 (63%), Gaps = 4/61 (6%)
Frame = -2
Query: 171 NCGYSR----PFLFLDMIWNLAXXXXXXXXXXXXVKERPSTPLRLWVFGYALQCLLHVGF 4
NCG S P +FLD IWN+A +KE+PSTPLR+WV GYALQC LHVGF
Sbjct: 22 NCGSSSRFFSPIVFLDAIWNMAFVVVSVIVLFSTLKEKPSTPLRVWVSGYALQCFLHVGF 81
Query: 3 V 1
V
Sbjct: 82 V 82
>ref|XP_006482012.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Citrus
sinensis]
Length = 303
Score = 68.6 bits (166), Expect = 9e-10
Identities = 33/61 (54%), Positives = 39/61 (63%), Gaps = 4/61 (6%)
Frame = -2
Query: 171 NCGYSR----PFLFLDMIWNLAXXXXXXXXXXXXVKERPSTPLRLWVFGYALQCLLHVGF 4
NCG S P +FLD IWN+A +KE+P+TPLR+WV GYALQC LHVGF
Sbjct: 22 NCGSSSRFFSPIVFLDAIWNMAFVVVSVIVLFSTLKEKPATPLRVWVSGYALQCFLHVGF 81
Query: 3 V 1
V
Sbjct: 82 V 82
>ref|XP_004165340.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin protein ligase
RIE1-like [Cucumis sativus]
Length = 264
Score = 67.4 bits (163), Expect = 2e-09
Identities = 30/51 (58%), Positives = 34/51 (66%)
Frame = -2
Query: 153 PFLFLDMIWNLAXXXXXXXXXXXXVKERPSTPLRLWVFGYALQCLLHVGFV 1
P L LD++WNLA +ERPSTPLRLW+ GY LQCLLHVGFV
Sbjct: 2 PILVLDVVWNLAFVLVSVVVLFSTFRERPSTPLRLWISGYGLQCLLHVGFV 52
>gb|EXB52082.1| E3 ubiquitin-protein ligase [Morus notabilis]
Length = 393
Score = 64.7 bits (156), Expect = 1e-08
Identities = 29/54 (53%), Positives = 36/54 (66%)
Frame = -2
Query: 162 YSRPFLFLDMIWNLAXXXXXXXXXXXXVKERPSTPLRLWVFGYALQCLLHVGFV 1
YS+P + LD++WNLA + E+PS PLRLWV GYALQCL+HVG V
Sbjct: 70 YSKPVIVLDVLWNLAFVGTGVVVLALSLDEKPSVPLRLWVVGYALQCLVHVGCV 123
>ref|XP_002312464.2| zinc finger family protein [Populus trichocarpa]
gi|550332992|gb|EEE89831.2| zinc finger family protein
[Populus trichocarpa]
Length = 351
Score = 64.7 bits (156), Expect = 1e-08
Identities = 29/55 (52%), Positives = 37/55 (67%)
Frame = -2
Query: 165 GYSRPFLFLDMIWNLAXXXXXXXXXXXXVKERPSTPLRLWVFGYALQCLLHVGFV 1
GYS+P + LDM+WN A VKERP+TP+R+W+ GYALQCL+HV V
Sbjct: 62 GYSKPVVSLDMMWNAAFVVVSVTMLLVTVKERPNTPIRIWICGYALQCLVHVVLV 116
>gb|ABK96450.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 218
Score = 64.7 bits (156), Expect = 1e-08
Identities = 29/55 (52%), Positives = 37/55 (67%)
Frame = -2
Query: 165 GYSRPFLFLDMIWNLAXXXXXXXXXXXXVKERPSTPLRLWVFGYALQCLLHVGFV 1
GYS+P + LDM+WN A VKERP+TP+R+W+ GYALQCL+HV V
Sbjct: 62 GYSKPVVSLDMMWNAAFVVVSVTMLLVTVKERPNTPIRIWICGYALQCLVHVVLV 116
>ref|XP_002511805.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis] gi|223548985|gb|EEF50474.1| cleavage and
polyadenylation specificity factor, putative [Ricinus
communis]
Length = 375
Score = 64.3 bits (155), Expect = 2e-08
Identities = 27/54 (50%), Positives = 35/54 (64%)
Frame = -2
Query: 162 YSRPFLFLDMIWNLAXXXXXXXXXXXXVKERPSTPLRLWVFGYALQCLLHVGFV 1
YS+P +FLD++WNLA VKE P PLR+W+ GY+LQCL H+G V
Sbjct: 79 YSKPIIFLDVLWNLAFVGIGVVVLGLSVKEEPQLPLRVWIIGYSLQCLFHIGCV 132
>ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis] gi|223534732|gb|EEF36424.1| cleavage and
polyadenylation specificity factor, putative [Ricinus
communis]
Length = 963
Score = 64.3 bits (155), Expect = 2e-08
Identities = 28/55 (50%), Positives = 37/55 (67%)
Frame = -2
Query: 165 GYSRPFLFLDMIWNLAXXXXXXXXXXXXVKERPSTPLRLWVFGYALQCLLHVGFV 1
GYS+P + LDM+WN A VKE+P+TP+R+W+ GYALQCL+HV V
Sbjct: 661 GYSKPVVALDMVWNTAFVVVSITMLILSVKEKPNTPIRIWICGYALQCLVHVVLV 715
>gb|AFG60447.1| hypothetical protein 0_5075_01, partial [Pinus taeda]
gi|383156392|gb|AFG60448.1| hypothetical protein
0_5075_01, partial [Pinus taeda]
gi|383156393|gb|AFG60449.1| hypothetical protein
0_5075_01, partial [Pinus taeda]
gi|383156394|gb|AFG60450.1| hypothetical protein
0_5075_01, partial [Pinus taeda]
gi|383156395|gb|AFG60451.1| hypothetical protein
0_5075_01, partial [Pinus taeda]
gi|383156396|gb|AFG60452.1| hypothetical protein
0_5075_01, partial [Pinus taeda]
gi|383156397|gb|AFG60453.1| hypothetical protein
0_5075_01, partial [Pinus taeda]
gi|383156398|gb|AFG60454.1| hypothetical protein
0_5075_01, partial [Pinus taeda]
gi|383156399|gb|AFG60455.1| hypothetical protein
0_5075_01, partial [Pinus taeda]
gi|383156400|gb|AFG60456.1| hypothetical protein
0_5075_01, partial [Pinus taeda]
gi|383156401|gb|AFG60457.1| hypothetical protein
0_5075_01, partial [Pinus taeda]
gi|383156402|gb|AFG60458.1| hypothetical protein
0_5075_01, partial [Pinus taeda]
gi|383156403|gb|AFG60459.1| hypothetical protein
0_5075_01, partial [Pinus taeda]
gi|383156404|gb|AFG60460.1| hypothetical protein
0_5075_01, partial [Pinus taeda]
gi|383156405|gb|AFG60461.1| hypothetical protein
0_5075_01, partial [Pinus taeda]
gi|383156406|gb|AFG60462.1| hypothetical protein
0_5075_01, partial [Pinus taeda]
gi|383156407|gb|AFG60463.1| hypothetical protein
0_5075_01, partial [Pinus taeda]
gi|383156408|gb|AFG60464.1| hypothetical protein
0_5075_01, partial [Pinus taeda]
Length = 130
Score = 63.5 bits (153), Expect = 3e-08
Identities = 25/54 (46%), Positives = 37/54 (68%)
Frame = -2
Query: 162 YSRPFLFLDMIWNLAXXXXXXXXXXXXVKERPSTPLRLWVFGYALQCLLHVGFV 1
YS+P + LD++WNL+ + ERP+TPLR+W+ GYALQC+LH+ +V
Sbjct: 70 YSKPVIILDILWNLSFVVVSVVILSSTLDERPTTPLRIWIVGYALQCILHMSYV 123
>gb|AEW07559.1| hypothetical protein 0_5075_01, partial [Pinus radiata]
Length = 130
Score = 63.5 bits (153), Expect = 3e-08
Identities = 25/54 (46%), Positives = 37/54 (68%)
Frame = -2
Query: 162 YSRPFLFLDMIWNLAXXXXXXXXXXXXVKERPSTPLRLWVFGYALQCLLHVGFV 1
YS+P + LD++WNL+ + ERP+TPLR+W+ GYALQC+LH+ +V
Sbjct: 70 YSKPVIILDILWNLSFVVVSVVILSSTLDERPTTPLRIWIVGYALQCILHMSYV 123