BLASTX nr result

ID: Rehmannia24_contig00028038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00028038
         (562 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318802.2| hypothetical protein POPTR_0012s12840g [Popu...    60   5e-07
ref|XP_006359686.1| PREDICTED: ribosomal L1 domain-containing pr...    57   3e-06
ref|XP_004231033.1| PREDICTED: ribosomal L1 domain-containing pr...    57   3e-06
gb|EPS67547.1| hypothetical protein M569_07232 [Genlisea aurea]        56   5e-06
ref|XP_004237178.1| PREDICTED: ribosomal L1 domain-containing pr...    56   7e-06
ref|XP_006374611.1| hypothetical protein POPTR_0015s12760g [Popu...    55   9e-06
ref|XP_002321931.1| hypothetical protein POPTR_0015s12760g [Popu...    55   9e-06

>ref|XP_002318802.2| hypothetical protein POPTR_0012s12840g [Populus trichocarpa]
           gi|550327004|gb|EEE97022.2| hypothetical protein
           POPTR_0012s12840g [Populus trichocarpa]
          Length = 397

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 42/116 (36%), Positives = 56/116 (48%), Gaps = 23/116 (19%)
 Frame = +2

Query: 2   VFEAIDGTLEIVPKKWGGIKCFHLKFSDSLALPIY-----------------ENKIVLQS 130
           V  AI+G  EIVP+KWGGI+ FHLK  DSLALP+Y                 E + V+  
Sbjct: 213 VMAAINGIAEIVPRKWGGIRSFHLKLLDSLALPVYQAVPDLKLKIDGSAKEQEEEDVVAE 272

Query: 131 DNSKLDKVGLVGKKR------RRSDRND*MRIRDYMVAGKLLPFLIQLHLCNPFQK 280
           +  K+ K G +GKK+      R  D ND  R+ D    G +    I  H  +  +K
Sbjct: 273 EEDKV-KEGKIGKKKGRIHEVRYMDNNDDGRVVDEDELGSVFEGDIDNHADDDVEK 327


>ref|XP_006359686.1| PREDICTED: ribosomal L1 domain-containing protein 1-like [Solanum
           tuberosum]
          Length = 411

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 22/35 (62%), Positives = 30/35 (85%)
 Frame = +2

Query: 5   FEAIDGTLEIVPKKWGGIKCFHLKFSDSLALPIYE 109
           FEAI G +++VPKKWGG++  HL+ SDSLALP+Y+
Sbjct: 211 FEAIKGVVQVVPKKWGGVRSLHLRLSDSLALPLYQ 245


>ref|XP_004231033.1| PREDICTED: ribosomal L1 domain-containing protein 1-like [Solanum
           lycopersicum]
          Length = 413

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 22/35 (62%), Positives = 30/35 (85%)
 Frame = +2

Query: 5   FEAIDGTLEIVPKKWGGIKCFHLKFSDSLALPIYE 109
           FEAI G +++VPKKWGG++  HL+ SDSLALP+Y+
Sbjct: 210 FEAIKGVVQVVPKKWGGVRSLHLRLSDSLALPLYQ 244


>gb|EPS67547.1| hypothetical protein M569_07232 [Genlisea aurea]
          Length = 252

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 24/36 (66%), Positives = 29/36 (80%)
 Frame = +2

Query: 2   VFEAIDGTLEIVPKKWGGIKCFHLKFSDSLALPIYE 109
           V EA+ G + IV  KW G++CFHLKFSDSLALPIY+
Sbjct: 208 VLEAVGGVVGIVSGKWRGVRCFHLKFSDSLALPIYD 243


>ref|XP_004237178.1| PREDICTED: ribosomal L1 domain-containing protein 1-like [Solanum
           lycopersicum]
          Length = 277

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 24/37 (64%), Positives = 30/37 (81%)
 Frame = +2

Query: 2   VFEAIDGTLEIVPKKWGGIKCFHLKFSDSLALPIYEN 112
           V  AIDG ++ VPKK  G++ FHLKFSDSLALP+YE+
Sbjct: 233 VLAAIDGIVQFVPKKLNGVRAFHLKFSDSLALPVYED 269


>ref|XP_006374611.1| hypothetical protein POPTR_0015s12760g [Populus trichocarpa]
           gi|550322595|gb|ERP52408.1| hypothetical protein
           POPTR_0015s12760g [Populus trichocarpa]
          Length = 412

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 17/77 (22%)
 Frame = +2

Query: 2   VFEAIDGTLEIVPKKWGGIKCFHLKFSDSLALPIY-----------------ENKIVLQS 130
           V  AI+G  +IVP+KWGG++ FHLK  DSLALP+Y                 EN   + S
Sbjct: 215 VMAAINGIADIVPRKWGGVRSFHLKLLDSLALPVYQVVPDSKLKIDGGPKEQENDEGVVS 274

Query: 131 DNSKLDKVGLVGKKRRR 181
              +  K G VGKK+ R
Sbjct: 275 VEEEKAKEGRVGKKKGR 291


>ref|XP_002321931.1| hypothetical protein POPTR_0015s12760g [Populus trichocarpa]
           gi|222868927|gb|EEF06058.1| hypothetical protein
           POPTR_0015s12760g [Populus trichocarpa]
          Length = 384

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 17/77 (22%)
 Frame = +2

Query: 2   VFEAIDGTLEIVPKKWGGIKCFHLKFSDSLALPIY-----------------ENKIVLQS 130
           V  AI+G  +IVP+KWGG++ FHLK  DSLALP+Y                 EN   + S
Sbjct: 215 VMAAINGIADIVPRKWGGVRSFHLKLLDSLALPVYQVVPDSKLKIDGGPKEQENDEGVVS 274

Query: 131 DNSKLDKVGLVGKKRRR 181
              +  K G VGKK+ R
Sbjct: 275 VEEEKAKEGRVGKKKGR 291


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